Carg19107-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19107-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Serine/arginine repetitive matrix protein 1-like
Location	Carg_Chr11: 12400662 .. 12401330 (+)
Sequence length	669
RNA-Seq Expression	Carg19107-RA
Synteny	Carg19107-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACATCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCTCTTAGATACTCCCATTTCCAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGACAAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGATATCTCAGGTTACGGAATGGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTCAGAGCAACGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACACCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTAGAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGCGAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGAGTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGATGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGCTGCTGGAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATCTTTCTGTAG

mRNA sequence

ATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACATCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCTCTTAGATACTCCCATTTCCAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGACAAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGATATCTCAGGTTACGGAATGGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTCAGAGCAACGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACACCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTAGAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGCGAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGAGTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGATGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGCTGCTGGAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATCTTTCTGTAG

Coding sequence (CDS)

ATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACATCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCTCTTAGATACTCCCATTTCCAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGACAAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGATATCTCAGGTTACGGAATGGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTCAGAGCAACGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACACCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTAGAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGCGAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGAGTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGATGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGCTGCTGGAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATCTTTCTGTAG

Protein sequence

MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL

Homology

[Close]

BLAST of Carg19107-RA vs. NCBI nr
Match: KAG7022904.1 (hypothetical protein SDJN02_16640, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG
Sbjct: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL 222

[Close]

BLAST of Carg19107-RA vs. NCBI nr
Match: KAG6589204.1 (hypothetical protein SDJN03_17769, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG
Sbjct: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFIFL 222

[Close]

BLAST of Carg19107-RA vs. NCBI nr
Match: XP_022930792.1 (uncharacterized protein LOC111437167 [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 220/239 (92.05%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEG
Sbjct: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAAG-----------------IQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAAG                 IQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL 239

[Close]

BLAST of Carg19107-RA vs. NCBI nr
Match: XP_022988923.1 (uncharacterized protein LOC111486133 [Cucurbita maxima])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 215/239 (89.96%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDT VENIPGNGTLEDETVKEVLL+TPISKPCDLQKPVPKFEEDKSP +EE 
Sbjct: 1   MRSPLPGSIDTHVENIPGNGTLEDETVKEVLLETPISKPCDLQKPVPKFEEDKSPVLEER 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSE SQVTEWCSNMSESVSMATTISEQREGD+ASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSETSQVTEWCSNMSESVSMATTISEQREGDDASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAA-----------------GIQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAA                 GIQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGDLQEIATTTKRDEGDDGIQPPNESIENPLVSLECFIFL 239

[Close]

BLAST of Carg19107-RA vs. NCBI nr
Match: XP_023531016.1 (uncharacterized protein LOC111793398 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 7.6e-75
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG
Sbjct: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSEISQVTEWCSNMSES+SMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSEISQVTEWCSNMSESLSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHE 159
           GDPSCRREQRCRVSCR+TQGR ESREARTRKKLS   E
Sbjct: 121 GDPSCRREQRCRVSCRSTQGRAESREARTRKKLSEDQE 158

[Close]

BLAST of Carg19107-RA vs. ExPASy TrEMBL
Match: A0A6J1ERM6 (uncharacterized protein LOC111437167 OS=Cucurbita moschata OX=3662 GN=LOC111437167 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.1e-111
Identity = 220/239 (92.05%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEG
Sbjct: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAAG-----------------IQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAAG                 IQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL 239

[Close]

BLAST of Carg19107-RA vs. ExPASy TrEMBL
Match: A0A6J1JNR3 (uncharacterized protein LOC111486133 OS=Cucurbita maxima OX=3661 GN=LOC111486133 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 215/239 (89.96%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 1   MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEG 60
           MRSPLPGSIDT VENIPGNGTLEDETVKEVLL+TPISKPCDLQKPVPKFEEDKSP +EE 
Sbjct: 1   MRSPLPGSIDTHVENIPGNGTLEDETVKEVLLETPISKPCDLQKPVPKFEEDKSPVLEER 60

Query: 61  GVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYS 120
           GVPSVSE SQVTEWCSNMSESVSMATTISEQREGD+ASSKQSREIGRNTTPKIRRKRPYS
Sbjct: 61  GVPSVSETSQVTEWCSNMSESVSMATTISEQREGDDASSKQSREIGRNTTPKIRRKRPYS 120

Query: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180
           GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG
Sbjct: 121 GDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGG 180

Query: 181 TNKMGGNVKSSAMKGSGRAA-----------------GIQPPNESIENPLVSLECFIFL 223
           TNKMGGNVKSSAMKGSGRAA                 GIQPPNESIENPLVSLECFIFL
Sbjct: 181 TNKMGGNVKSSAMKGSGRAAGDLQEIATTTKRDEGDDGIQPPNESIENPLVSLECFIFL 239

[Close]

BLAST of Carg19107-RA vs. ExPASy TrEMBL
Match: A0A6J1HYF2 (uncharacterized protein LOC111468062 OS=Cucurbita maxima OX=3661 GN=LOC111468062 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 8.5e-64
Identity = 163/270 (60.37%), Postives = 185/270 (68.52%), Query Frame = 0


Query: 2   RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEV 61
           ++P PG   T V NIPG GT E+ETVKEVL +TPI+KPC++Q+  PK +      KS E+
Sbjct: 25  KTPSPGCAITDVGNIPGTGTPEEETVKEVLSETPIAKPCNIQQTSPKNKSSELKVKSSEM 84

Query: 62  E------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTP 121
           +      E G  SVSE+SQVTEWCSNMSESVSMATTISEQREGDEASSKQSRE+GRN  P
Sbjct: 85  DGSLNKVEEGTLSVSEVSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREMGRNPKP 144

Query: 122 KIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSG 181
           KIRRKRPYSGDPS RR+QR                 RV+CR T G TESREARTR KL+G
Sbjct: 145 KIRRKRPYSGDPSYRRDQRDKCATKRPAELLSEKKSRVTCRYTHGTTESREARTR-KLNG 204

Query: 182 GHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRA---------------- 223
           G EQ+SGV HGRRSRSP A +TV  TNK  GN+KSSA+K +G+A                
Sbjct: 205 GQEQKSGVSHGRRSRSP-ATQTVRETNKT-GNMKSSALKATGQAGEQPEAVTTEKRDEGK 264

[Close]

BLAST of Carg19107-RA vs. ExPASy TrEMBL
Match: A0A6J1GNG7 (uncharacterized protein LOC111455516 OS=Cucurbita moschata OX=3662 GN=LOC111455516 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 163/270 (60.37%), Postives = 184/270 (68.15%), Query Frame = 0


Query: 2   RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEV 61
           ++P PG   T V NIPG GT E+ETVKEVL +TPI+KPC++Q+  PK +      KS E+
Sbjct: 25  KTPSPGCAITDVGNIPGTGTPEEETVKEVLSETPIAKPCNIQQTSPKNKSSELKVKSSEM 84

Query: 62  E------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTP 121
           +      E G  SVSE+SQVTEWCSNMSESVSMATTISEQREGDEASSKQSRE+GRN  P
Sbjct: 85  DGSLNKVEEGTLSVSEVSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREMGRNPKP 144

Query: 122 KIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSG 181
           KIRRKRPYSGDPS RREQR                 RV+CR T G TESREARTR KL+G
Sbjct: 145 KIRRKRPYSGDPSYRREQRDKCATKRPAELLSEKKSRVTCRYTHGTTESREARTR-KLNG 204

Query: 182 GHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRA---------------- 223
           G EQ+SGV HGRRSRSP A RTV  TNK  GN+KSSA+K +G+A                
Sbjct: 205 GQEQKSGVNHGRRSRSP-ATRTVRETNKT-GNMKSSALKVTGQAGEQPEAVTTEKRDEGK 264

[Close]

BLAST of Carg19107-RA vs. ExPASy TrEMBL
Match: A0A5D3C531 (Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003610 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.1e-58
Identity = 156/268 (58.21%), Postives = 173/268 (64.55%), Query Frame = 0


Query: 2   RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVE--- 61
           + P PG  DT VEN+P N T E+ETVKEVL +TPI+KPC +++  PK   ++  +     
Sbjct: 51  KPPSPGWFDTDVENVPDNRTPEEETVKEVLSETPIAKPCSVEQTSPKKPPEQKVKASGMD 110

Query: 62  ------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPK 121
                 E  + SVSE SQVTEWCSNMSESVSMATTISEQREGDEASSK SREIGRN  PK
Sbjct: 111 GSLVKGEESIVSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK-SREIGRNIKPK 170

Query: 122 IRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGG 181
           IRRKRP SGD S RREQR                 RV+CR + G TESREARTRK     
Sbjct: 171 IRRKRPCSGDLSYRREQRDKCATKRPAELLPEKKSRVNCRYSHGTTESREARTRKLNGVQ 230

Query: 182 HEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRA----------------- 223
           HEQQSGV HGRRSRSP AARTV  TNK  GN+KSS MK +G+A                 
Sbjct: 231 HEQQSGVSHGRRSRSP-AARTVKDTNKT-GNMKSSVMKMTGQAGDQQETVTTENRDEGKL 290

The following BLAST results are available for this feature:

BLAST of Carg19107-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022904.1	3.4e-115	100.00	hypothetical protein SDJN02_16640, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589204.1	1.3e-114	99.55	hypothetical protein SDJN03_17769, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930792.1	1.5e-110	92.05	uncharacterized protein LOC111437167 [Cucurbita moschata]	[more]
XP_022988923.1	6.8e-108	89.96	uncharacterized protein LOC111486133 [Cucurbita maxima]	[more]
XP_023531016.1	7.6e-75	96.20	uncharacterized protein LOC111793398 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19107-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19107-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERM6	7.1e-111	92.05	uncharacterized protein LOC111437167 OS=Cucurbita moschata OX=3662 GN=LOC1114371...	[more]
A0A6J1JNR3	3.3e-108	89.96	uncharacterized protein LOC111486133 OS=Cucurbita maxima OX=3661 GN=LOC111486133...	[more]
A0A6J1HYF2	8.5e-64	60.37	uncharacterized protein LOC111468062 OS=Cucurbita maxima OX=3661 GN=LOC111468062...	[more]
A0A6J1GNG7	2.5e-63	60.37	uncharacterized protein LOC111455516 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A5D3C531	3.1e-58	58.21	Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Carg19107-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33871:SF20	BNAC01G20710D PROTEIN	coord: 21..222
None	No IPR available	PANTHER	PTHR33871	OS05G0503100 PROTEIN-RELATED	coord: 21..222

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19107	Carg19107	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19107-RA:1	Carg19107-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19107-RA:cds	Carg19107-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19107-RA	Carg19107-RA-protein	polypeptide