Carg19082-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19082-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	peroxisome biogenesis protein 22-like
Location	Carg_Chr11: 12279252 .. 12289037 (-)
Sequence length	2204
RNA-Seq Expression	Carg19082-RA
Synteny	Carg19082-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGGGGGAAGCAAATTCTCTCTCGGCCGTAACAATCCAGCGAGCATCGGCGGCGGAGGGATGCGATTCTCTGATATTTATCGAGTTATCGGAAATTTATAAAGGCTGTTACAGTGTGTTAGGGCTCTATCATGGCGGAATTTTCTTCAAAAGAGGCGCTCGTCCGGCTGATCAAGCGGTTTGGGAGTAATCTAAGCGTCAAGCTATCCAGTTTATTCTCGATATTGTTTCAAAGCCGAGTTTGTTTTCTATTCCTTTCGTCTATTCGTTTTCGTCGAATTTTGCGGTAGAATCTTGGGAATTGTGTTTTCAAATTCTGCTACTCGTTCTAGTTTTTGTATTAACCGGTTCGGAAGTTTTGTGGAATGTTTGACATGATAATTTTGCATGATTGGTACATAAAGCGTCTTGGCTCTCTTATTTGATATATTAATGCTGTAGTGTGTTCGGTAAGATTGTTTTCTTTACCAAATTGTTGCTTCTCTCGTCTTCACTGTGGTAAACTATAACTGGTGTCTGATGAGTGTTTAAAATTGTCCGGTATCTTGAGCTATGGCTATATACTAATTGGACAAGATTGTCTTGTTTGTGAGCAGTAATCTTAGACTGGATGCTCGACGATGGTCTGTTTTTTTTTATATAATAGTCCGTCATTGATAAAATTGATAGCAAGACAGTTTTCTTTAGGCATTGTGTTCCCCTTAAAATCAAATCTTTTAGACGCAAATTCTTGTCTTGGACGTGCTGGATGAAAGTGGAATTTCAAATACGAACATTGACTACACTAAGGATTCAACATGAGGAAGTTTTATGGCTTCAGAGGTCTAAACAAAAATATCTCCAGGATGGAGATGACAACTCTGCCTTTGTCCATAAAATATGGCCAGTTGGAGGAACAGCTTAATTGTGGATGTTGGATGCACTGACCAGTGATGAGAGAAGCTTAATTAATGACCAGGGATAGAAGTTGAATTTCTTAACTTCTTTTTCCAAAGGCTCTACATACAGAAAAAATGGTAGAAAAAAGCTCAATTCTAAGGGTCTAAACTAGGATCATATCTCACTTGAAGAAAGTGTCAAAAGTTTAACCGAGATTCCTTGAAGAAAAACTTTCAACTGTAGTCTCTTCTCTTGGAATGAAAAAGATCCCCGTCTACATTGCTTAAGATTAACAAAAAAATGGAAAACTATCGGGTGAAATTAGAACCATAGTCAGATAAATAACACTTAAGCAACCCAATGATTCCTTCATATAGTCGATGATTAAAAAAAAATCTCCCGCTCAATTGTTGAGATATTGAAACTTTGAAGCACATAGGAGATGCATGTGGAGGTTTTGTTGAGAATGCCAAAAGGACATTATTGCATGTGAGCCTAATGGAACCCACCATCTGAATAAAGAAAAACTCATAGGGTTTCATACCAATCGAAGTCTTTGTACCATCATCATCAAAGACTCTCCCTTATGGTCAATATAGACCCTTGCTTCAATGGAGATTTGTTTGTTGATGTTATGGGTTTCCATGGCATCAGATCATCATTGAAAGGAATCTGCATAGTCGAAGATATTGAGGTATTCAAAAACATCAAGAGGCATCTTTGGACCATACCCTTAGTCAAACCACCCAGGCACATCACCAAAAAGGATTTCTCAAGTACAGTATGACTTCATAAAAGAAGTTGAACTCATTGACCATCCCCTCGATTATGGTCTCTATACCTAGTGAAACAACAGATTTCCACTCACCTTGACACTCATCGACAAATTTTTTACTACAGAAGATCTATTTGGAAAACTTAGTAACGCTGGTGTTGGAGGGTTGAATACAATTACATCTGATCATTATCCCATTGTACTTTCCATGAGCTGTTATAAATGGGGACCCTTGCCCTTTCGCTCCGAGAATATGTGGTTGAACCACTTTGAATTTTGCTAATGGTAGAATATTGGTGGAAGAACACGCCACTCCATGGATGGCCACGGTTTCATCAATGAAATTAAAAGGCTAAAAGAAGTCTTAAAGAAATGGAACAAGGAGGTTTTCAATTGTATCTCCAGAAAAGGAAACCAACTCCTTATTAAAATTTCTCTACTTGATCATAGGGAGGAAACTTTCTCCATCACTTTAGTCCAACACAAAGCTCATGAAAGTAAAACTTATCTTGTTGGTAGCAAAGGAACAGCAATCTTGGAGACAAAAATGTAAGAAATGATGGCTAGAGGAGGGTGACATAAACTCCTAATTTTTCCATCGTATCATGGTTTCAAAGAAACGAAAGAGTACCATCATGGTAATTCTATCGACATGATGTAGAAGTTCGGTAAACGAGGATGAAATTGTATTAGAATTTGTGTCCTTTTACATGTTATACACAAAGGTCAACACCTTCATTGAATCTTCCCACAATCTTGACTGGAGACCAATTGATCCACAGCCAGTAGCCTCCTTTGAGGTTACTTTCACCAAAAAAGAGGTAGGAAAGGCGATACAGTTCCTAGGCACAAACAAAACTCCTGGACTTTTAAAAAAATGTTGGAACATTTTGAGAGCCGATATCATGAGAGGGTTCCAAGATTGTTTTTTAGAATGAAATTATGAGCGAATCTAAATGAAACATACATTTGCTTGATTTAAAAAAAAATAGATGTCTGCAGTGTCGTTAACTTTTGCCCCATAAGTCTTACAACCAGACTTCACAAAATCATAGCAAGGTGCTATCATAGCGTCTACACAAGATCATAGCAAAGGTGCTATCAGAGCGTCTTAAAAGGGTTATACCTCTTGCAATTATTAGTTGACAACTTTTGTAGAGGAAGACAAATCATTGATGCATCACTCATGGAAAATGAAATTATAGATGAATGGAGAAGGAAGAAACAAAAAAGTGTAGTCATAAAGCTTGACTCGGAGAAAGTCCTCGACAAGATCGATTGGACTTTCCTTGAAAAACATTCTTGTAGCATAAGGCTTTGGCTTAAAATGGTGAGGATGGATAAAAAGTTGCATTCCATCTACAAACTTCTCCATCATCATCAATGAAAGATCGAGAGGGAAGATCTATACCTCAAAGCGGTCTTCGACAAAGGGATCCACCATTCCCATTCCTTTTCATGATGGTAATGGATTACCTCAGGCGCTTACTCACCAAGGTCAAATACGAAGGGCAGATAAAGGGCTTTTAGGTTGGAAATGAGGGAATACGCATCAACCTTCTTCAGTTTGAAAATAATACAATCCTCTTCTCTAATTTGTCTAATGTCTCCTCCATAAAAAAGCATGATCAAGACGTTAAAAAACTTTGCTAGCAATGGTCATCTCACAGAGATTATCGAAAACCTTGCTAGCAAATACGGTTGTAAAAAGGGTGAATGGCCACATATGTACTTAGGATTACCCTTACATGGAAACCTTAAATCCCTTTTATTCTCTCTTATTCTGGAAAACCATTATTGATAAAATAGAAAAAGAATATTCACATGGTCATCATGCTATGGTCATCATGCTATACTTTCAAAGGCGGAAGGCCTACCCTAATACATGTCTCACTATCAAACCCCCCACTTACTATATGTCTCTATTTGAAATACCACAAAAAGTGGTTACGGTTATAAAGAGATTATTCAGAAACTATCTATGGAAAGATAGTCTCACCTTGTCCGATGAAATATCATAAACCTCCCAGCAATAAATGGAGGACTTGGTCTATTTTCAATAAAGGAGAAGAAGAGATTTAATCACCGAGAAGACGCCTTGTGGAGAAAAATTATAAAGGCCAAGTATACTCCTACATCATGTACAAATCATCCCCATCCATCTTCAGCAAAGGGGCGTGGGAAGTACATAAAAGCACAAAACCTCATCACCTGCTGAATTCACCATAAGGTGGGTGATGGAGGAAGCACATCTTTTTGAAGCGATATCTAGATTGGAAACACCATGCGGCCGTGCAGTATTCACTTCTATATGACTCTCTCATAACAAAACAGTCACGATCAAGAAATATGGAATGATGTAATAACATTTTGAGACCTGAAAATTGGTAGGAACCTAAAGGATAACGAAGTTACAAAATGGGCCGAATTAAGCTCCGACATCACCCCAATTACATTTTCTAAAGAAGCAGACTCATTGACATGACTCCTTAGTGCTGACAAGATCATCTCTACAAAATCTTTGATGATGGACATAGGGTAAAAAGTAGAAGTAATCCACGCTAGCAAAGACAATATGGAAAGAAAATCACCCTAAAAAGGTGAAATTCTTCTTTTGGGAAATAGTGCATAAAGGCATTAGCACGAGAGAAAATCTAGAAAAAAAAAAAAAAAAAAACTGACATGACTCTACTTTCAAGTTGGTGCCCATTATGCAAGAAAAACAACGAATCACAAAACCACTTATTTATGCAATGCACATATACTCAAAATTTCTAGAAAAGGATCGTCAGTACCTTCAAATGACATCTCACTTTTCCCAAGTAAAGGAATTATTGGACATGGCCTTAACGTACCACCTCTTAATGAATGCATAAACCTTGCTATGGAAAAATATCATTATGGTTTTCTTTTGGATTATGGAAAGAAAGAAATGAAAGAGTAGTCACAAAGAAGGCACGGACTTAATACTAAGTTCTTTGACAATGTTGCTTACCACGCTATATCTTGGTGTAAATTGTCTAATACCTAGCTTCATATAGTCATACTTCCCTCATTATCAATGGAAGGTTTTTTTTGTAAACATGATGGATAGCACATGCTTTTTAAATTTCAAACATAAATGAACTCTTATAAATAAATTAAGTCTTGGAACAAAATAATATAATGAATTGGCTGCAAGATTATTTCAGAATGGTAACATCAACACTACCATCGATAAAAGGGCGTGGAAAAAGTGTTGGTAGAGGGATTATAATCAATTATCCTCGAATCGCTATTAAATATCTGTGTTTGTAGGAGCAGACAATTTGGATCCCATCCTCATTGTCAACATACTCGAAGATGAGTGACAAGTAAAAAGAAGAAGGGCTCGGTCTTTTAACTTAACCTTAAAAATGGGTATCATTTGTTTGATCATAATTTGTGATTACCGTTCTCAAGGAGAAGGTTTTGGTTCCAAATTTGGAATGTGATCAGAGGATGCCTTTTTTATTATCTTCTTAGTCATTTTTAATGGGAAATCAAGAGGGAAGTTCAATGCTTGAGGGGGTTGAGACCTAGAGTTCCTTTGTTGCCTTCCCTTTTTGACCGCTGAGTAGATGGTTTTCAGGAGATCTGACAACAAATTATGTCACTAATAGTAGGGGTGTAAACAGTTCGGTGATAAGACTTGGGGAATTAATAATCTCTTCATATGTGTCAAATTTTGCCTTCCCTTTTTGATGGTTTGACTAGGAACATTGGTAAAAATTATAAATTCCTCTTTTTGATAGACTTGGGGAGTTATCTGTGATCTTATGGCAGGTGTAACAGGTATTCTATTACTAAGATGACAATTTAATGTCTCATGATCTAATTTGTTGCAGAATCTGCGGTCTCTTAGTGCTATTGCGGGCTTTGCTCTTGCTGTAATCTTCTCATGGAAAATGTTAAAACCACCTAGTGAACATCACAGAAGGCAACGGAAAAGGCAAACTTCTGCAGCAGGCAACTCTGACATTGGCACCGATTCAAATTCCCAATTGACTACTTCTGCAACTTGTTCTCCATCAGAGGATTCAGGTGCACAAACTGTTGACAATGAAGTTTACCGGCCATTGAAGGTAAGTGGCGGGTTTTCTTTGCCTGACATAAAATTCGTAAACATATGTGCTTATAGTTTGAAATGTTCACTTTCATCCTTAAGTTTCATATAGATTAACTCATGAGATTTAGGACATAGTTCAAATAGGTTCCTAGAATCATTATTCCATTATTGATATTAGCAAAAATTTTATTGGGAAAATTATATGATAATGTGGCTTAGCATATCTAGTCAATTCCAATGTGGCAAGTGTGTGTGTGTTTGTGTGTATATATATTTGTGTGTGTGTGTGCATGTATGTATTTATGCATGCATGCTTGTGATAAAACCTGATCTGTTTCTGAAAGATTTTGGCGAAGCAAAGGGAGATTCAAGGGCTTCCATCTCTCCAAAATACTCTCAAGAAGTCTTACAAACAGATAGCAAAAACCTACATCCTCTACTCACATAAACACCCTTAAAAACCTCCTGCAACAACAAATCATTACGATACTCTAGCTCACTCATAAAACAAACAGCATAGAATGTTCTCATTATCATTCTCTCTTTTTCTCTCTTTCCTATGTGTATACACTTGGGTCAACAATTCCAGAACCACATCATTTAAGTCAGTTAATCATTTAACTTCTCCAATCAAATTCTATTAGCGTCATTAATGTAATAGTGATTTCATAGACCTAATTGAACCATTTCATACCTCAAGTATTATAATGTTGCTTTATCAAAGCATAGGAACTGAAATGATCTTTTTCAGACTCTAAACATGCTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTACTATTTTTTACTTATTAATTACTTAATTTACAATGAGTGTCTGGTTTTACCTCAGCCAACTTTGGAGCAAATTGTTAGACAGAAGCTAGGTGGCGGAAGAAAGGTAATCAAACATATCAGTAGCCTCGATATGTTTATGTCTTGCAATGAGTTATTTCATTAAAAATGGATAACATTTTAATCCCATTGACCATTCATCAGACGTAAGCTTAACCTTGCTATTTAACATTTATCATTCTACGTGCTCTAAAGCCTACCCGTTGAAGTTGGCATTCATCTCGTACAAGCATATAAAACATATGTTGAAATGGCAAGTTCTGATTCCAAATTCTTGTTATTTCAGGTAACTTGCCGTCTACTTGGAATCATTTTGGAGGAAAACAGTTCAGAAGAGCTGCAAGTTGTGGTATTTTTCCTATCTGTGTATTTGTGAATGAAATGATATTTGAGAACGAAGCTTGGTTGGGTTTGATGTTTTGTAATGTTACTGGCAGAATCAAGCAACTGTGAGGTCCTCTGTCGTGGATATGCTTTTAGAGATCACAAAACATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGGTGAGATTTCAATTTATCAGGATGAACTTTTAAAATGTTAGTGAACGCTGTAAAATGTTTTCTCGCTTACAATTATTGGCAGAGAAGATTGTGCTTTCTCTCTCTCTCTCCCTGTGCTTTACAGTCAAACCATGCACAGACTTAAACAACAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATTTAGCATCTAAATATATTGGAAAGCCAACCTGAAGCGTTAAAAGTTTATTTCAATACAAAAATATTATGCTTTCTGATACTTGGCTTTTACTGCGAGTATTTCCAAATATAGCATGCGTTGGATCTCATTTTCAGTGCAACGAACACCGTGAGAAGGCTTTTATATTCGACTTCAGTTATGTTAGTTTTTAATCTTTTTAAATTTCAAATACCGAAGTCCACGTATGGATTATTTTATTTATGGTAGTCCTGGAGCTGCACTCTACCTTATTCACTAAGACTCCAGGATTTATAGCCATTTTTGGCAGTATCTTCATTTATCATCGCATCAATAATTTTAATACTGAAAAAAATATCTTTTGCAGAGAAAGGTTATTGTGGCTCTGGAAGATGCTGGTGTTTTCACATCAGGTGACATGATCAAGGATAAGGTTGATCCCCATACATGAACTTTCTTGTTTAATTTTGCTCAGTCGGATTCTATTTGCCTATTCTTCTTGTATTCTTCATAGTTTCAGTACCTGGACTTGAATTCTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTAAGGTTGATAAAACGAATCTTAGTGTTCTTCAGTTATTTATTTTCTTGTTTCTCGGTTGCTGCAATGTTATGGGCATTTGACATCATTTTGTCAGTTACCTCTTTTTCTTATTACGTTTCTTAACACTTTTGGGATCCCACCCCACCTCATGCGGCCTACCACTGTATTTTAAGACCTGTGAAATGCCAGAGAGAAGCTAGCTGAACTTTTTATATTCTTGACATGTCATCTCGATATCATCACTTTATATAATTTCAGCTACTTTTTGCTTTCCTTTGTTAACTAATTTCATCTTAAATTTTGTACCGCCTGCTGTGTTTAGGTTCTCTTCTGTAGCACAGAAAGTGGGCGGAGGTCTTTCGTTCGGCAACTAGAACCTGATTGGCATATTGACTCGGATCCTGAAATTGTTTCTCAACTTGCGGTATATTTCCATTAAACTTTACCGTGGCTAGATTATGAAGAGTGATCGGACATGAACAAAATTTTCAATATTTTTTTAAACCAGTCTGCTAAGTTTGTTTTTATGTCACAGAGATACATCAAGTGTCAGCTTCACATAACTGAAGTTAAGCCCGACCGGACAGCCTCCAATGTTTTTACCTCGGCATCACTGGAGCAGTTCTTTCAATGCACATGACACAGAGAGCAGCAGAAATATATGTAGAAATTTCCTTCTTCAATTGTGTTCTTCATCTTCGATTTTATGCGCATTACTTCCTGCAAATGATCTCCATTTCAGGCAATGCTCGGTTTTTGTTTCATCCTGTAAGTGCATCTCTTTAATAAGTGACTGTGTTACTCCCAACCCAATAAGTGCAGAGGCATATGGATAGCAGCAATTAGATGAAGATGCTCTCCCCATCTTTAGGAAATCTTAGGCTCTGTTTTTCTGTGTTATCCCCCAAGGTTTTGCCTAGTCCATCACACCAAGTTGTACTAACCTTTAGCTCTTTAGTTTTGAGAAACCTTGTTCTACTGCCCCTTTCCCCCTTTTTAGCTCTTTAGTTTTGACTTCATTTATACACCAATTTATTTTCTACATGTTATAAATATGATCTCTTAAATTTTCAAATCCCCTCTCACGGTTTCCGTAATTCAATTTAGAATTATACAAATATTGCATTGAATTGCTTGAAAGAAGTAAATTAGTGCATTGAAATGCTTGTACTAGTTCAGAGAGATTATCTTCGCCATGATGATTCAAAAAAAGCAACCAAAATCTACCATGAAAAAATAGAATGGAGAGGTCATCGGTATCTGATATGCTAAATCACAAACTCGAAAATTACAAGTGTATTAAACAAGAACGTATAAAACCCCAACCTGTGCGCAACTCTATGAAACTAATTACTTTACTAAGAATTCATTTAATCTCTACAACAGGATTCAATGTTAGGCATTGTCCAAGCGTGCCCTTTCGTCATCGAGCGCCACCACATCTACATTTTGATCTTCACTTTCATACTGCAAATCAAATATTATGTTAGATGCTACAAGTAAGAGGTGACAATAGTTTTATTCTTTGTTAAAGAAATAAAACCATACTGAATAACACTCGTGACTTTCTACGGTAACAACTCAAGCCCACCGCTAGCGGGGCTTTCCCTCAAAGTTTTTAAAATGTGTCTGATAGAAAAAGGTTTCCACACTCTGCTTCGTTCTCCTCCCCAACCGATGTAGGATCTCACAATCCACCTCCCTTCAAGGGCGAGCGTCCTCGCTGGCACTCATTCCCTTCTCTAATATATATGGATTAAACGAAAAAAGTGAAAGTGGTGAAATTCAGAGAACTTGCTAACCTTTGAATGGTTAATTTCACGGATTGGAGGTGGAGGGGGCGGAAAGGGCAGGCTACCGAACGAAGCTTCCTTAGTATTT

mRNA sequence

GAAGGGGGGAAGCAAATTCTCTCTCGGCCGTAACAATCCAGCGAGCATCGGCGGCGGAGGGATGCGATTCTCTGATATTTATCGAGTTATCGGAAATTTATAAAGGCTGTTACAGTGTGTTAGGGCTCTATCATGGCGGAATTTTCTTCAAAAGAGGCGCTCGTCCGGCTGATCAAGCGGTTTGGGAGTAATCTAAGCGTCAAGCTATCCAGTTTATTCTCGATATTGTTTCAAAGCCGAAATCTGCGGTCTCTTAGTGCTATTGCGGGCTTTGCTCTTGCTGTAATCTTCTCATGGAAAATGTTAAAACCACCTAGTGAACATCACAGAAGGCAACGGAAAAGGCAAACTTCTGCAGCAGGCAACTCTGACATTGGCACCGATTCAAATTCCCAATTGACTACTTCTGCAACTTGTTCTCCATCAGAGGATTCAGGTGCACAAACTGTTGACAATGAAGTTTACCGGCCATTGAAGCCAACTTTGGAGCAAATTGTTAGACAGAAGCTAGGTGGCGGAAGAAAGGTAACTTGCCGTCTACTTGGAATCATTTTGGAGGAAAACAGTTCAGAAGAGCTGCAAGTTGTGAATCAAGCAACTGTGAGGTCCTCTGTCGTGGATATGCTTTTAGAGATCACAAAACATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGAGAAAGGTTATTGTGGCTCTGGAAGATGCTGGTGTTTTCACATCAGGTGACATGATCAAGGATAAGGTTCTCTTCTGTAGCACAGAAAGTGGGCGGAGGTCTTTCGTTCGGCAACTAGAACCTGATTGGCATATTGACTCGGATCCTGAAATTGTTTCTCAACTTGCGAGATACATCAAGTGTCAGCTTCACATAACTGAAGTTAAGCCCGACCGGACAGCCTCCAATGTTTTTACCTCGGCATCACTGGAGCAGTTCTTTCAATGCACATGACACAGAGAGCAGCAGAAATATATGTAGAAATTTCCTTCTTCAATTGTGTTCTTCATCTTCGATTTTATGCGCATTACTTCCTGCAAATGATCTCCATTTCAGGCAATGCTCGGTTTTTGTTTCATCCTGTAAGTGCATCTCTTTAATAAGTGACTGTGTTACTCCCAACCCAATAAGTGCAGAGGCATATGGATAGCAGCAATTAGATGAAGATGCTCTCCCCATCTTTAGGAAATCTTAGGCTCTGTTTTTCTGTGTTATCCCCCAAGGTTTTGCCTAGTCCATCACACCAAGTTGTACTAACCTTTAGCTCTTTAGTTTTGAGAAACCTTGTTCTACTGCCCCTTTCCCCCTTTTTAGCTCTTTAGTTTTGACTTCATTTATACACCAATTTATTTTCTACATGTTATAAATATGATCTCTTAAATTTTCAAATCCCCTCTCACGGTTTCCGTAATTCAATTTAGAATTATACAAATATTGCATTGAATTGCTTGAAAGAAGTAAATTAGTGCATTGAAATGCTTGTACTAGTTCAGAGAGATTATCTTCGCCATGATGATTCAAAAAAAGCAACCAAAATCTACCATGAAAAAATAGAATGGAGAGGTCATCGGTATCTGATATGCTAAATCACAAACTCGAAAATTACAAGTGTATTAAACAAGAACGTATAAAACCCCAACCTGTGCGCAACTCTATGAAACTAATTACTTTACTAAGAATTCATTTAATCTCTACAACAGGATTCAATGTTAGGCATTGTCCAAGCGTGCCCTTTCGTCATCGAGCGCCACCACATCTACATTTTGATCTTCACTTTCATACTGCAAATCAAATATTATGTTAGATGCTACAAGTAAGAGGTGACAATAGTTTTATTCTTTGTTAAAGAAATAAAACCATACTGAATAACACTCGTGACTTTCTACGGTAACAACTCAAGCCCACCGCTAGCGGGGCTTTCCCTCAAAGTTTTTAAAATGTGTCTGATAGAAAAAGGTTTCCACACTCTGCTTCGTTCTCCTCCCCAACCGATGTAGGATCTCACAATCCACCTCCCTTCAAGGGCGAGCGTCCTCGCTGGCACTCATTCCCTTCTCTAATATATATGGATTAAACGAAAAAAGTGAAAGTGGTGAAATTCAGAGAACTTGCTAACCTTTGAATGGTTAATTTCACGGATTGGAGGTGGAGGGGGCGGAAAGGGCAGGCTACCGAACGAAGCTTCCTTAGTATTT

Coding sequence (CDS)

ATGGCGGAATTTTCTTCAAAAGAGGCGCTCGTCCGGCTGATCAAGCGGTTTGGGAGTAATCTAAGCGTCAAGCTATCCAGTTTATTCTCGATATTGTTTCAAAGCCGAAATCTGCGGTCTCTTAGTGCTATTGCGGGCTTTGCTCTTGCTGTAATCTTCTCATGGAAAATGTTAAAACCACCTAGTGAACATCACAGAAGGCAACGGAAAAGGCAAACTTCTGCAGCAGGCAACTCTGACATTGGCACCGATTCAAATTCCCAATTGACTACTTCTGCAACTTGTTCTCCATCAGAGGATTCAGGTGCACAAACTGTTGACAATGAAGTTTACCGGCCATTGAAGCCAACTTTGGAGCAAATTGTTAGACAGAAGCTAGGTGGCGGAAGAAAGGTAACTTGCCGTCTACTTGGAATCATTTTGGAGGAAAACAGTTCAGAAGAGCTGCAAGTTGTGAATCAAGCAACTGTGAGGTCCTCTGTCGTGGATATGCTTTTAGAGATCACAAAACATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGAGAAAGGTTATTGTGGCTCTGGAAGATGCTGGTGTTTTCACATCAGGTGACATGATCAAGGATAAGGTTCTCTTCTGTAGCACAGAAAGTGGGCGGAGGTCTTTCGTTCGGCAACTAGAACCTGATTGGCATATTGACTCGGATCCTGAAATTGTTTCTCAACTTGCGAGATACATCAAGTGTCAGCTTCACATAACTGAAGTTAAGCCCGACCGGACAGCCTCCAATGTTTTTACCTCGGCATCACTGGAGCAGTTCTTTCAATGCACATGA

Protein sequence

MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKPPSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQIVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERVLDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQLARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT

Homology

[Close]

BLAST of Carg19082-RA vs. NCBI nr
Match: KAG6589179.1 (Peroxisome biogenesis protein 22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022879.1 Peroxisome biogenesis protein 22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.9 bits (1361), Expect = 2.7e-146
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 276

[Close]

BLAST of Carg19082-RA vs. NCBI nr
Match: XP_022930839.1 (peroxisome biogenesis protein 22-like [Cucurbita moschata])

HSP 1 Score: 525.0 bits (1351), Expect = 3.9e-145
Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEENS EELQVVNQATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEENSIEELQVVNQATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 276

[Close]

BLAST of Carg19082-RA vs. NCBI nr
Match: XP_022988884.1 (peroxisome biogenesis protein 22-like [Cucurbita maxima])

HSP 1 Score: 518.5 bits (1334), Expect = 3.6e-143
Identity = 271/276 (98.19%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSL AIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLGAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNE YRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEFYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIIL ENSSEELQVVNQATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILVENSSEELQVVNQATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCST SGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTGSGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 276

[Close]

BLAST of Carg19082-RA vs. NCBI nr
Match: XP_023531638.1 (peroxisome biogenesis protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.7 bits (1332), Expect = 6.2e-143
Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSN+SVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNISVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNE YRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEFYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEENSSEELQ VNQATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQDVNQATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQ T
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQYT 276

[Close]

BLAST of Carg19082-RA vs. NCBI nr
Match: XP_038886874.1 (peroxisome biogenesis protein 22-like isoform X1 [Benincasa hispida] >XP_038886875.1 peroxisome biogenesis protein 22-like isoform X1 [Benincasa hispida] >XP_038886876.1 peroxisome biogenesis protein 22-like isoform X1 [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.6e-125
Identity = 240/276 (86.96%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAE SSKE L+RLIKRFGSNLSVKLSSLFSILFQ++N RSLSAIAGFALAVIFSWK+LKP
Sbjct: 1   MAELSSKEELIRLIKRFGSNLSVKLSSLFSILFQTQNFRSLSAIAGFALAVIFSWKLLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQT AAGNSDIGT S+SQL TS T SP EDSGAQ VDNE YRP+KPTLEQ
Sbjct: 61  PSEHHRRQRKRQTPAAGNSDIGTSSDSQLITSGTSSPPEDSGAQNVDNEFYRPVKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEE+S EELQ VNQATVRSSVVD+LL I  +CDLYLMER 
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEESSPEELQ-VNQATVRSSVVDVLLVIINYCDLYLMERA 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSG +IKDKVLFCSTE+GR SFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGGLIKDKVLFCSTENGRTSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LAR+IKCQLHI++VKP++ ASNVFTSASLEQFFQCT
Sbjct: 241 LARFIKCQLHISQVKPEKMASNVFTSASLEQFFQCT 275

[Close]

BLAST of Carg19082-RA vs. ExPASy Swiss-Prot
Match: Q9LSX7 (Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.5e-80
Identity = 175/283 (61.84%), Postives = 213/283 (75.27%), Query Frame = 0


Query: 1   MAEFSS---KEALVRLIKRFGSNLSVKLSSLFSILFQSRNL--RSLSAIAGFALAVIFSW 60
           MAE SS    E +VRLIKR  + ++ K+SSLFS     RNL  RS+ AIAG A+AVIF+W
Sbjct: 1   MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTT-SIRNLDSRSIGAIAGLAIAVIFTW 60

Query: 61  KMLKPPSE-HHRRQRKRQT-SAAGNSDIGTDSNSQLTTSA---TCSPSEDSGAQTVDNEV 120
           + ++ P E   RRQ KR+  +A  +S     S S L +S      SP ED+  Q V ++ 
Sbjct: 61  RAIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQF 120

Query: 121 YRPLKPTLEQIVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITK 180
           ++P+KPTL QIVRQKL  GRKVTCRLLG+ILEE S EELQ   QATVRSSV+++LLEITK
Sbjct: 121 FQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQ--KQATVRSSVLEVLLEITK 180

Query: 181 HCDLYLMERVLDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWH 240
           + DLYLMERVLD+ESE KV+ ALE+AGVFTSG ++KDKVLFCSTE GR SFVRQLEPDWH
Sbjct: 181 YSDLYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWH 240

Query: 241 IDSDPEIVSQLARYIKCQLHITEVKPDRTASNVFTSASLEQFF 274
           ID++PEI +QLAR+IK QLH+  VKP+RTA NVFTS S+EQFF
Sbjct: 241 IDTNPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFF 280

[Close]

BLAST of Carg19082-RA vs. ExPASy TrEMBL
Match: A0A6J1ESM5 (peroxisome biogenesis protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111437207 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.9e-145
Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEENS EELQVVNQATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEENSIEELQVVNQATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 276

[Close]

BLAST of Carg19082-RA vs. ExPASy TrEMBL
Match: A0A6J1JMU7 (peroxisome biogenesis protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111486105 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 271/276 (98.19%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSL AIAGFALAVIFSWKMLKP
Sbjct: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLGAIAGFALAVIFSWKMLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNE YRPLKPTLEQ
Sbjct: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEFYRPLKPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIIL ENSSEELQVVNQATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILVENSSEELQVVNQATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVFTSGDMIKDKVLFCST SGRRSFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTGSGRRSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT
Sbjct: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 276

[Close]

BLAST of Carg19082-RA vs. ExPASy TrEMBL
Match: A0A0A0K1M8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044800 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.3e-117
Identity = 228/276 (82.61%), Postives = 245/276 (88.77%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKE LVRLIKR GSNLSVKLS+LFSILFQ+RN RSLSAIAG ALAVIFSWK+L+P
Sbjct: 1   MAEFSSKEELVRLIKRLGSNLSVKLSTLFSILFQTRNFRSLSAIAGLALAVIFSWKLLRP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PS H RRQ KRQTS+AGNSDI T SNSQL TSA  SPS+D+GAQ          KPTLEQ
Sbjct: 61  PSGHRRRQPKRQTSSAGNSDISTSSNSQLITSAVFSPSDDAGAQ----------KPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEE S EELQ VNQATVRSSVVD+LLEIT +CDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEEKSPEELQAVNQATVRSSVVDVLLEITNYCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDEESERKVIVALEDAGVF SG +IK+KVLFCSTE+GR SFVRQLEPDWHIDSDPEI+SQ
Sbjct: 181 LDEESERKVIVALEDAGVFASGGLIKEKVLFCSTENGRTSFVRQLEPDWHIDSDPEIISQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQCT 277
           LAR+IKCQLH++EVKP+R ASNVFTSASLE FFQCT
Sbjct: 241 LARFIKCQLHVSEVKPERMASNVFTSASLEHFFQCT 266

[Close]

BLAST of Carg19082-RA vs. ExPASy TrEMBL
Match: A0A6J1C6G4 (peroxisome biogenesis protein 22-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007820 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.4e-116
Identity = 230/274 (83.94%), Postives = 251/274 (91.61%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MA  SSKE LV+LIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWK+LKP
Sbjct: 1   MAGSSSKEELVQLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKLLKP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PS HHRRQ KRQTSA  NSD  + ++SQL TS TCSPS+DSGAQ  DNE+Y+P+KPTL Q
Sbjct: 61  PSGHHRRQPKRQTSATSNSD--STTSSQLITSRTCSPSDDSGAQNFDNELYQPVKPTLGQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           IVRQKLGGGRKVTCRLLGIILEE+S EELQ VN+ATVRSSVVD+LLEITKHCDLYLMERV
Sbjct: 121 IVRQKLGGGRKVTCRLLGIILEEHSPEELQ-VNEATVRSSVVDVLLEITKHCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
           LDE+SERKVI+ALE AGVFTSG +IKDKVLFCSTE+GR SFVRQLEPDWHIDSDPEIVSQ
Sbjct: 181 LDEDSERKVIMALEGAGVFTSGGLIKDKVLFCSTENGRTSFVRQLEPDWHIDSDPEIVSQ 240

Query: 241 LARYIKCQLHITEVK-PDRTASNVFTSASLEQFF 274
           LAR+I CQLHI++VK PDRT+SNV +SASLEQFF
Sbjct: 241 LARFINCQLHISQVKPPDRTSSNVLSSASLEQFF 271

[Close]

BLAST of Carg19082-RA vs. ExPASy TrEMBL
Match: A0A1S3C0F2 (peroxisome biogenesis protein 22-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495582 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.4e-116
Identity = 225/275 (81.82%), Postives = 244/275 (88.73%), Query Frame = 0


Query: 1   MAEFSSKEALVRLIKRFGSNLSVKLSSLFSILFQSRNLRSLSAIAGFALAVIFSWKMLKP 60
           MAEFSSKE LVRLIKRFGSNLSVKLSSLFSILFQ+RN RSLSA+AG ALAVIFSWK+L+P
Sbjct: 1   MAEFSSKEELVRLIKRFGSNLSVKLSSLFSILFQTRNFRSLSAVAGLALAVIFSWKLLRP 60

Query: 61  PSEHHRRQRKRQTSAAGNSDIGTDSNSQLTTSATCSPSEDSGAQTVDNEVYRPLKPTLEQ 120
           PS H RRQ KRQ+S+AGNSDIGT SNSQL TSA  SPS+D+GAQ          KPTLEQ
Sbjct: 61  PSGHRRRQPKRQSSSAGNSDIGTSSNSQLITSAIVSPSDDAGAQ----------KPTLEQ 120

Query: 121 IVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITKHCDLYLMERV 180
           I+RQKLGGGRKVTCRLLGIILEE S EELQ VNQATVRSSVVD+LLE+T +CDLYLMERV
Sbjct: 121 IIRQKLGGGRKVTCRLLGIILEERSPEELQAVNQATVRSSVVDVLLELTNYCDLYLMERV 180

Query: 181 LDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWHIDSDPEIVSQ 240
            DEESERKVIVALEDAGVF SG +IKDKVLFCSTE+GR SFVRQLEPDWHIDSDPEI+SQ
Sbjct: 181 FDEESERKVIVALEDAGVFASGGLIKDKVLFCSTENGRTSFVRQLEPDWHIDSDPEIISQ 240

Query: 241 LARYIKCQLHITEVKPDRTASNVFTSASLEQFFQC 276
           LAR+I CQLHI++VKP+R ASNVFTSASLE FFQC
Sbjct: 241 LARFITCQLHISQVKPERMASNVFTSASLEHFFQC 265

[Close]

BLAST of Carg19082-RA vs. TAIR 10
Match: AT3G21865.1 (peroxin 22 )

HSP 1 Score: 299.7 bits (766), Expect = 2.5e-81
Identity = 175/283 (61.84%), Postives = 213/283 (75.27%), Query Frame = 0


Query: 1   MAEFSS---KEALVRLIKRFGSNLSVKLSSLFSILFQSRNL--RSLSAIAGFALAVIFSW 60
           MAE SS    E +VRLIKR  + ++ K+SSLFS     RNL  RS+ AIAG A+AVIF+W
Sbjct: 1   MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTT-SIRNLDSRSIGAIAGLAIAVIFTW 60

Query: 61  KMLKPPSE-HHRRQRKRQT-SAAGNSDIGTDSNSQLTTSA---TCSPSEDSGAQTVDNEV 120
           + ++ P E   RRQ KR+  +A  +S     S S L +S      SP ED+  Q V ++ 
Sbjct: 61  RAIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQF 120

Query: 121 YRPLKPTLEQIVRQKLGGGRKVTCRLLGIILEENSSEELQVVNQATVRSSVVDMLLEITK 180
           ++P+KPTL QIVRQKL  GRKVTCRLLG+ILEE S EELQ   QATVRSSV+++LLEITK
Sbjct: 121 FQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQ--KQATVRSSVLEVLLEITK 180

Query: 181 HCDLYLMERVLDEESERKVIVALEDAGVFTSGDMIKDKVLFCSTESGRRSFVRQLEPDWH 240
           + DLYLMERVLD+ESE KV+ ALE+AGVFTSG ++KDKVLFCSTE GR SFVRQLEPDWH
Sbjct: 181 YSDLYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWH 240

Query: 241 IDSDPEIVSQLARYIKCQLHITEVKPDRTASNVFTSASLEQFF 274
           ID++PEI +QLAR+IK QLH+  VKP+RTA NVFTS S+EQFF
Sbjct: 241 IDTNPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFF 280

The following BLAST results are available for this feature:

BLAST of Carg19082-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589179.1	2.7e-146	100.00	Peroxisome biogenesis protein 22, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022930839.1	3.9e-145	99.28	peroxisome biogenesis protein 22-like [Cucurbita moschata]	[more]
XP_022988884.1	3.6e-143	98.19	peroxisome biogenesis protein 22-like [Cucurbita maxima]	[more]
XP_023531638.1	6.2e-143	98.19	peroxisome biogenesis protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_038886874.1	2.6e-125	86.96	peroxisome biogenesis protein 22-like isoform X1 [Benincasa hispida] >XP_0388868...	[more]

BLAST of Carg19082-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSX7	3.5e-80	61.84	Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 S...	[more]

BLAST of Carg19082-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESM5	1.9e-145	99.28	peroxisome biogenesis protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111437...	[more]
A0A6J1JMU7	1.8e-143	98.19	peroxisome biogenesis protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC11148610...	[more]
A0A0A0K1M8	6.3e-117	82.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044800 PE=4 SV=1	[more]
A0A6J1C6G4	1.4e-116	83.94	peroxisome biogenesis protein 22-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3C0F2	2.4e-116	81.82	peroxisome biogenesis protein 22-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Carg19082-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21865.1	2.5e-81	61.84	peroxin 22	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..105
IPR037485	Peroxisome biogenesis protein 22	PANTHER	PTHR34126	PEROXISOME BIOGENESIS PROTEIN 22	coord: 4..275

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19082	Carg19082	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19082-RA:8	Carg19082-RA:8	exon
Carg19082-RA:7	Carg19082-RA:7	exon
Carg19082-RA:6	Carg19082-RA:6	exon
Carg19082-RA:5	Carg19082-RA:5	exon
Carg19082-RA:4	Carg19082-RA:4	exon
Carg19082-RA:3	Carg19082-RA:3	exon
Carg19082-RA:2	Carg19082-RA:2	exon
Carg19082-RA:1	Carg19082-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19082-RA:three_prime_utr	Carg19082-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19082-RA:cds	Carg19082-RA:cds_8	CDS
Carg19082-RA:cds	Carg19082-RA:cds_7	CDS
Carg19082-RA:cds	Carg19082-RA:cds_6	CDS
Carg19082-RA:cds	Carg19082-RA:cds_5	CDS
Carg19082-RA:cds	Carg19082-RA:cds_4	CDS
Carg19082-RA:cds	Carg19082-RA:cds_3	CDS
Carg19082-RA:cds	Carg19082-RA:cds_2	CDS
Carg19082-RA:cds	Carg19082-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19082-RA:five_prime_utr	Carg19082-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19082-RA	Carg19082-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007031	peroxisome organization
cellular_component	GO:0016021	integral component of membrane