Carg18639-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18639-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein Brevis radix-like 4 isoform X1
Location	Carg_Chr12: 11927460 .. 11931052 (-)
Sequence length	1463
RNA-Seq Expression	Carg18639-RA
Synteny	Carg18639-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATATAGCCGGTAGCAGGTAAGGACGATGGGACATTGAAGACATGTCATAATTGCAATTGCCCGGCAACCAACAATTTGTTTCACACTCATTTGCGCTCCTTTACATTTCCCGCCGGAGCAACACTCTGTTTCCATTTCCACTAGGTTCCTTCGGTTTTCTTCTTCTCTGTTCTAAAAATTCCTTCAAGTATTAAATATGGTTTTTTACAGGGAATCACTGGTGCTTCGTCTATGCTTGGATTGAATCAGTCTGACGGCGGAGAACGGCGGCGTCTTACGTTCATCGCGTCAAAATTGAACCACAACAGTTGATCCATAATTTTAGAGGAGAAAGTAGAGATTCTAGTCTCCATCATCTTGTTCTTTTAGAAACTTGTTCGAAATTGGAGTACTGGAGAAGTGCTGCGAGAGGTGAAAATGCTGACATGCATAGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGACTCACTCAATGGACCTGGAAACAAGCAACAATCTGTCAAATCTCTGACAGGTCAGGTACTATGAGATCAAATTCTTTCTCTCCTAGTTACCAATTTCATGTTCTCGTGACAGGAATGCGGGCTTACATTCCTTGCTTGTTCATTGTTTTTAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGGTACGCTCTATACTCATCCATATCAACGACACAGATTTTCTTTGTTTGGGTCTATTTAATTCCTTCCCTGTTTCACTATAATCATATACCATATTTCAGGGATTCGCCACCATCTTTTTCCACTTTTTAATTAGCAATACAAGGCCCTCTTAGTGGGTCATTTACTGGGTTTTATTTTTTGGGTTTATTTGTCCTTCTGGAGTTTCTCTGTCTCTTTGGTGTTAGGATGGTTAGGAGGGGAACGATCATTGGGTTTACAAGTAAAGAATACTGTCGGAATACTGTCGGAATACTGTCTCCAACGACACGAGACCTTTTAAGGAAGCTCAAAACAAAGTCATCAGTCTTTTTAAGGAAGCTCAAAACAAAGTCACAAGAGTATAAGGGAAGCATCATTAGTCATTCCTAAGCTTAAAAAAAAAAAAAAGAGGAAATAAAAAAATTCAGACGCGGCGTTCAAACATAGGGTTGGAGTAATTTCCGTTGGAACAGCATTGGGTAGGTAGGGTCAGACTTTGATCAGTAAAGATCACGCCTTCTCATGAAAAGCAATCAAGAAAAAGTCCAAAAGTAGAACTCAATTTGATGGTGGTGGGGTAGCTTTCTTCCCAGTTTTTGTCTTTGTGTCGGGGAAGTAATCTCTTTGTTGTCAAGAATTCTTCACGCCCACCCTGATTCTCCTGGATTTGTCTTCTCCTAAATTGAGTTCCGCCACTATGCCTGGACACACATACACCCCACATGCCACACAAAACTTACCATCTTACGAAAACGACCCAGGAGGGAGGGCGACCTTATTCTTCAAGGGGGACAAGACAAGACTTAGGGAGTAATTGTGTATACTGTTGGTCTCTGCTACATGTCGGACCTCAGTCCTTCTTCCACCCCAAATAATTGAATAAACTGTTGTGTGTGTTTCATCCGTAACCATTTGGACCCTCTGCGCATTGACTTTAAACTACGTGACACCAACTAGACCATCCTATCCTATCATATTGGCTTGCTCTGTTAGCGAAATAAAGTTGGAGGGGTTTGGATCTAGTCTCCATAGCTCTTGGGTTGGGTACACAGTCAATATTGACACCTCGAGAACTACTTTATTCAAAGCATTAAAGTGTTCACATTCCCTTTTTCCCCTTTTTATTAGTTATTTTTTTACTGAAGAAAATTGGGTTTCTCTTTGAGAATTTTCATGATTAGCAGCACTTGGGTGGGTTGGGTAAAAAGTTGTTGCAAGGGACGAGAACAATATCCCTTGCTATGTTCTTATCTTGTTAGCTATGTAAGAAAACAAAAGGAGTGGGAGTTGATTTGGTTTCATCTTTCAGTAGTTGATTATCTGGTTAGTATCTCTATCTAGAGTTTGATTATTGTTTTGATAACCATCTTTGATTAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGGTAACCTTCTATATAATTATAGAAAGAGGATGAGGCTGTGAGTGTTAAATTTGTTTTGTTCATATTATCTATGTTGCTATATCCTATTGATGAGGCTCCCCTTTCCCCCCGAAACAACAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCAAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGGTATGAAGATACTACATAATCTTGATTTGGAAGTAGTTAACGAACATTGCTTTCAGAAAGTCTTCCAAACGAGTATAGATCCAAAATCAATCAAAAGCCAATTATATATCATGGTCATTAAGATCTCTTTCTGCCTATTTATGAGGTGATATAATGCTATAGTCATAAAAATACTCATTCCTCTGCCCTAGATAACACTTTTAGATATCCTGTAAATCTCTTCAAATGTTCTTTGTCTTATGGGTTGCTATGGCTCTAATGGTCCCTCCAGCTAGTCTACTTTCATGCTCTAGTATGTTTGGAGATCATTTAAACTAAAGGTAGTCCTAGGCCAGGTGACCCACAGGCTTTCTAGCAGCGTTCATTATGTCGGGGAATAGCATGATTTGTTTATTCAAGGTCATTTTCGTAGCCAGAATTCTTATTGTCAAGTCCATTTTGAATTTTGTAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATAC

mRNA sequence

GTATATAGCCGGTAGCAGGTAAGGACGATGGGACATTGAAGACATGTCATAATTGCAATTGCCCGGCAACCAACAATTTGTTTCACACTCATTTGCGCTCCTTTACATTTCCCGCCGGAGCAACACTCTGTTTCCATTTCCACTAGGGAATCACTGGTGCTTCGTCTATGCTTGGATTGAATCAGTCTGACGGCGGAGAACGGCGGCGTCTTACGTTCATCGCGTCAAAATTGAACCACAACAGTTGATCCATAATTTTAGAGGAGAAAGTAGAGATTCTAGTCTCCATCATCTTGTTCTTTTAGAAACTTGTTCGAAATTGGAGTACTGGAGAAGTGCTGCGAGAGGTGAAAATGCTGACATGCATAGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGACTCACTCAATGGACCTGGAAACAAGCAACAATCTGTCAAATCTCTGACAGGTCAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCAAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATAC

Coding sequence (CDS)

ATGCTGACATGCATAGCTCGTTCTAAGAAACTCGGAGATGGCTCATTGAGTCAAATTGAAGAACCGGACTCACTCAATGGACCTGGAAACAAGCAACAATCTGTCAAATCTCTGACAGGTCAGCTCAGAGACATGGCGTTGAAAGCCTCAGGATCGTACCGGACTTGCAACCCTTGCGCAGGGCCGATACCGCCGAGTCGACTCAAGAACTGCAACTCACAGCCGGACGCCGACTCGGACCGGATCAAGTGGGCTTACAAGAGGAGCGGGAGCTTGAGCTCGACGAAAACGAGGACATGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGAACCCCGAATTCAGTGAGTGGGCGGCGAGTTGACCCAGTTGTTTACGTTGAGGAAAAGGAACCAAAGGAGTGGGTGGCCCAGGTGGAACCCGGTGTGTTAATCACATTCGTTTCGCTTCCTCGCGGAGGGAATGATCTGAAACGGATACGTTTCAGTCGGGACGTGTTCAATAAATGGCAAGCTCAGAGATGGTGGGCCGAGAACTATGATAAAGTTATGGAACTATACAATGTCCAGAGGTTCGACCGCCAAGCTTTTCCTCTTCCTACCCCACCGAGATCTGAGGATGAGAGCTCAAAAATTGAATCTATAGAGAACAGCCCTGTGACACCTCCACTAACCACAGAACGCTTGCCTCGCAATCTCTACCGTCCTACTGGAGCTGGGGCAAGCTATTCATCCTCAGATTCACTTGAATACCAGCCAATGCAGTATCGCCAGTACCAAGATTCAGGTCTGACCTCTACTCCGAAACTCTCTAGCATCAGTGGTGCCAAGACGGAAACATCTTCCATTGATGCATCCATGAGAAGCAGTTCATCTAGGGATGCAGATCGTTCAGGAGAGCTATCCATCAGCAATGCTAGTGATCTTGAGTCTGAATGGGTTGAACAGGATGAACCAGGGGTTTATATTACAATCAGAGCATTGCCTGGCGGCAAAAGGGAACTAAGAAGAGTCAGATTCAGCCGGGAAAAGTTCGGGGAGATGCATGCAAAAGTGTGGTGGGAAGAGAATCGAGCCAGGATACACGAGCAATAC

Protein sequence

MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCAGPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQY

Homology

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BLAST of Carg18639-RA vs. NCBI nr
Match: KAG7021346.1 (Protein Brevis radix-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 734.9 bits (1896), Expect = 3.3e-208
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. NCBI nr
Match: KAG6586487.1 (Protein Brevis radix-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 733.8 bits (1893), Expect = 7.4e-208
Identity = 369/370 (99.73%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELS+SNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSMSNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. NCBI nr
Match: XP_023537650.1 (protein Brevis radix-like 4 [Cucurbita pepo subsp. pepo] >XP_023537651.1 protein Brevis radix-like 4 [Cucurbita pepo subsp. pepo] >XP_023537652.1 protein Brevis radix-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 733.4 bits (1892), Expect = 9.6e-208
Identity = 369/370 (99.73%), Postives = 369/370 (99.73%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDS NGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. NCBI nr
Match: XP_022965520.1 (protein Brevis radix-like 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 731.1 bits (1886), Expect = 4.8e-207
Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDS NGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAK ETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKMETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. NCBI nr
Match: XP_022938081.1 (protein Brevis radix-like 4 isoform X1 [Cucurbita moschata] >XP_022938082.1 protein Brevis radix-like 4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 729.6 bits (1882), Expect = 1.4e-206
Identity = 367/370 (99.19%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSKKLGDGSLSQIEEP S NGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot
Match: Q8GZ92 (Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 7.1e-137
Identity = 268/393 (68.19%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSK+ GD S  Q ++PDS N         KSLT QL+DMALKASG+YR C PC 
Sbjct: 1   MLTCIARSKRAGDESSGQPDDPDSKN--------AKSLTSQLKDMALKASGAYRHCTPCT 60

Query: 61  ---------GPIPPSRLKNCNSQPDADSD-RIKWAYKRSGS----------LSSTKTRTW 120
                    GPI  +   + + + D +SD R K  Y RS S              + R W
Sbjct: 61  AAQGQGQGQGPI-KNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVW 120

Query: 121 GKEMEARLKGISSGEGTPNSVSGR-RVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
           GKEMEARLKGISSGE TP S SGR RVDP+V+VEEKEPKEWVAQVEPGVLITFVSLP GG
Sbjct: 121 GKEMEARLKGISSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIE- 240
           NDLKRIRFSRD+FNK QAQRWWA+NYDKVMELYNVQ+  RQAFPLPTPPRSEDE++K+E 
Sbjct: 181 NDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENAKVEY 240

Query: 241 SIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSG-LTSTPKLSS 300
             E++P TPPL  ERLPR ++RP G  A+YSSSDSL++  MQ +Q+ DSG L STPK+SS
Sbjct: 241 HPEDTPATPPLNKERLPRTIHRPPGL-AAYSSSDSLDHNSMQSQQFYDSGLLNSTPKVSS 300

Query: 301 ISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGK 360
           IS AKTETSSIDAS+RSSSSRDADRS E+S+SNASD+++EWVEQDEPGVYITI+ LPGGK
Sbjct: 301 ISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGK 360

Query: 361 RELRRVRFSREKFGEMHAKVWWEENRARIHEQY 371
           RELRRVRFSRE+FGEMHA++WWEENRARIHEQY
Sbjct: 361 RELRRVRFSRERFGEMHARLWWEENRARIHEQY 383

[Close]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot
Match: Q8GYL9 (Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 4.5e-115
Identity = 233/385 (60.52%), Postives = 287/385 (74.55%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDS----LNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTCIA +K+L     GS  Q E+ +     +  P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQY 371
           SREKFGE +A++WWE+NRARI +QY
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQY 373

[Close]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot
Match: Q5HZ09 (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 9.9e-107
Identity = 219/400 (54.75%), Postives = 275/400 (68.75%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCN 60
           MLTCIA +K+L     GS  + +E   + G    +Q++KSLT QL+DMA+KASG+Y+ C 
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60

Query: 61  PCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEG 120
           PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS EG
Sbjct: 61  PCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEEG 120

Query: 121 TPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF--------- 180
           TP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF         
Sbjct: 121 TPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYYR 180

Query: 181 -----------------SRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRS 240
                             R++FNKWQAQ+WW EN++KVMELYNVQ F++Q+ PL TPP S
Sbjct: 181 DQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPVS 240

Query: 241 EDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLT 300
           ED  S+I+S+++SPVTPPL  ER  RN+                            SG  
Sbjct: 241 EDGGSQIQSVKDSPVTPPLERERPHRNI-------------------------PGSSGFA 300

Query: 301 STPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITI 360
           STPKLSSISG KTETSSID S RSSS    DRS E+S+SNASD+ESEWVEQDEPG+YITI
Sbjct: 301 STPKLSSISGTKTETSSIDGSARSSS---VDRSEEVSVSNASDMESEWVEQDEPGIYITI 360

Query: 361 RALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQY 371
           RALP G RELRRVRFSR+KFGE HA++WWE+NRARI +QY
Sbjct: 361 RALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369

[Close]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot
Match: Q6YUB8 (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.6e-101
Identity = 229/410 (55.85%), Postives = 268/410 (65.37%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLN------GPG-----NKQQSVKSLTGQLRDMALKA 60
           MLTCIA SK+L  G+    E+ D  +      G G     + +Q++K+LT Q++DMALKA
Sbjct: 1   MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKA 60

Query: 61  SGSYRTCNPCAGPIPPS------RLKNCNSQPDADSDRIKWAYKRSGS----LSSTKTRT 120
           SG+YR C PCAG    S      R    ++  D+ SDR  +AY+R+GS      S   RT
Sbjct: 61  SGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATPSVSART 120

Query: 121 WGKEMEARLKGISSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
                   L G    E       G   D     E+ E KEWVAQVEPGVLITF+SLP GG
Sbjct: 121 ------DFLAGDEEEEEEEEEEEGTTADG---SEDDEAKEWVAQVEPGVLITFLSLPEGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIES 240
           NDLKRIRFSR++FNKWQAQRWWAENY+KVMELYNVQRF++Q  PLPT P+SEDES K   
Sbjct: 181 NDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT-PLPTTPKSEDESLK--- 240

Query: 241 IENSPVTPPLTTERLPRNLYRPTGAG--ASYSSSDSLEYQP--------------MQYRQ 300
            E+ P TPPL +ERLP  L+R    G    Y   DSL +Q                 ++ 
Sbjct: 241 -EDIPATPPLNSERLPHTLHRSLTGGRTTGYGQPDSLGHQHNLGNGHRQQHHHCYTGHQC 300

Query: 301 YQDSGLTSTPKLSSISGAKTETSSIDASMRSSSS-RDADRSGEL--SISNASDLESEWVE 360
           Y   GL STPKLSSISGAKTETSS+DASMRSSSS  + DRS EL  S+SNASD E EWVE
Sbjct: 301 YGSVGLASTPKLSSISGAKTETSSMDASMRSSSSPEEVDRSRELSVSVSNASDQEREWVE 360

Query: 361 QDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQY 371
           +DEPGVYITIRALPGG RELRRVRFSREKF EMHA++WWEENRARIH+QY
Sbjct: 361 EDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396

[Close]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot
Match: Q17TI5 (Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 3.7e-69
Identity = 166/379 (43.80%), Postives = 221/379 (58.31%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           M +CIA +K   DG   ++E         N +++VKSLT Q++DMALK SG+Y+ C PC 
Sbjct: 1   MFSCIACTK--ADGG-EEVEHGARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPCT 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTW---------GKEMEARLKGI 120
           G       K   S PD D+      Y   G  S+  T  W            +E++   I
Sbjct: 61  GSSSSPLKKGHRSFPDYDNASEGVPYPFMGG-SAGSTPAWDFTNSSHHPAGRLESKFTSI 120

Query: 121 SSGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDV 180
              +    S+S +  D  V +++  PKEW+AQVEPGV ITF SLP GGNDLKRIRFSR++
Sbjct: 121 YGND--RESISAQSCD--VVLDDDGPKEWMAQVEPGVHITFASLPTGGNDLKRIRFSREM 180

Query: 181 FNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTT 240
           F+KWQAQRWW ENYDK++ELYNVQRF+RQA  L TP RS+D+S + +S  +   +   + 
Sbjct: 181 FDKWQAQRWWGENYDKIVELYNVQRFNRQA--LQTPARSDDQSQR-DSTYSKMDSARESK 240

Query: 241 ERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDAS 300
           +  PR+ +RP G+   +    S  Y P  Y                          +DA+
Sbjct: 241 DWTPRHNFRPPGSVPHHFYGGSSNYGPGSYH---------------------GGPPMDAA 300

Query: 301 MRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFG 360
             ++SSRD       S+SNAS++++EW+E+DEPGVYITIR L  G RELRRVRFSRE+FG
Sbjct: 301 RTTTSSRD----DPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFG 343

Query: 361 EMHAKVWWEENRARIHEQY 371
           E+HAK WWE+NR RI  QY
Sbjct: 361 EVHAKTWWEQNRERIQTQY 343

[Close]

BLAST of Carg18639-RA vs. ExPASy TrEMBL
Match: A0A6J1HNY5 (protein Brevis radix-like 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465400 PE=3 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.3e-207
Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDS NGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAK ETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKMETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. ExPASy TrEMBL
Match: A0A6J1FC55 (protein Brevis radix-like 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444276 PE=3 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 6.7e-207
Identity = 367/370 (99.19%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTC+ARSKKLGDGSLSQIEEP S NGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCMARSKKLGDGSLSQIEEPGSFNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. ExPASy TrEMBL
Match: A0A1S4E1T5 (protein Brevis radix-like 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498685 PE=3 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.7e-199
Identity = 353/370 (95.41%), Postives = 362/370 (97.84%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGDGSLSQIEEPDS+NG  NKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDGSLSQIEEPDSVNGLENKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIP SRLKNC+SQ DADS+R KWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPQSRLKNCSSQSDADSERFKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           +SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 LSGRRVDPVVYVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           P GAG SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PIGAGVSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++WWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. ExPASy TrEMBL
Match: A0A0A0LFQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000270 PE=3 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.3e-197
Identity = 352/370 (95.14%), Postives = 360/370 (97.30%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSKKLGD SLSQIEEPDS NG  NKQQSVKSLTGQLRDMALKASGSYRTCNPCA
Sbjct: 1   MLTCIARSKKLGDASLSQIEEPDSDNGLENKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60

Query: 61  GPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120
           GPIP SRLKNC+SQ DADS+R KWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS
Sbjct: 61  GPIPQSRLKNCSSQSDADSERFKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTPNS 120

Query: 121 VSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180
           +SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW
Sbjct: 121 LSGRRVDPVVYVEESEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQRW 180

Query: 181 WAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNLYR 240
           WAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNLYR
Sbjct: 181 WAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNLYR 240

Query: 241 PTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300
           P GAG SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA
Sbjct: 241 PIGAGVSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSRDA 300

Query: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVWWE 360
           DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++WWE
Sbjct: 301 DRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWE 360

Query: 361 ENRARIHEQY 371
           ENRARIHEQY
Sbjct: 361 ENRARIHEQY 370

[Close]

BLAST of Carg18639-RA vs. ExPASy TrEMBL
Match: A0A6J1DN08 (protein Brevis radix-like 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021910 PE=3 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 5.0e-194
Identity = 346/372 (93.01%), Postives = 358/372 (96.24%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPD--SLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNP 60
           MLTCIARSKKLGDGSLSQIEE D  S++GPG+KQQSVKSLTGQLRDMALKASGSYRTCNP
Sbjct: 1   MLTCIARSKKLGDGSLSQIEESDSVSVSGPGSKQQSVKSLTGQLRDMALKASGSYRTCNP 60

Query: 61  CAGPIPPSRLKNCNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEGTP 120
           CAGPI  SRLKNC+SQ D DS+R +WAYKRSGSLSS KTRTWGKEMEARLKGISSGEGTP
Sbjct: 61  CAGPITQSRLKNCSSQSDGDSERFRWAYKRSGSLSSMKTRTWGKEMEARLKGISSGEGTP 120

Query: 121 NSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ 180
           NS+SGRRVDPVVYVEE EPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ
Sbjct: 121 NSLSGRRVDPVVYVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQAQ 180

Query: 181 RWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPRNL 240
           RWWAENYD+VMELYNVQRF+RQAFPLPTPPRSEDESSKIES+ENSPVTPPLTTERLPRNL
Sbjct: 181 RWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKIESVENSPVTPPLTTERLPRNL 240

Query: 241 YRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSSSR 300
           YRP G G SYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISG KTETSSIDASMRSSSSR
Sbjct: 241 YRPAGTGMSYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGVKTETSSIDASMRSSSSR 300

Query: 301 DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAKVW 360
           DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHA++W
Sbjct: 301 DADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLW 360

Query: 361 WEENRARIHEQY 371
           WEENRARIHEQY
Sbjct: 361 WEENRARIHEQY 372

[Close]

BLAST of Carg18639-RA vs. TAIR 10
Match: AT5G20540.1 (BREVIS RADIX-like 4 )

HSP 1 Score: 488.4 bits (1256), Expect = 5.0e-138
Identity = 268/393 (68.19%), Postives = 307/393 (78.12%), Query Frame = 0


Query: 1   MLTCIARSKKLGDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCNPCA 60
           MLTCIARSK+ GD S  Q ++PDS N         KSLT QL+DMALKASG+YR C PC 
Sbjct: 1   MLTCIARSKRAGDESSGQPDDPDSKN--------AKSLTSQLKDMALKASGAYRHCTPCT 60

Query: 61  ---------GPIPPSRLKNCNSQPDADSD-RIKWAYKRSGS----------LSSTKTRTW 120
                    GPI  +   + + + D +SD R K  Y RS S              + R W
Sbjct: 61  AAQGQGQGQGPI-KNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVW 120

Query: 121 GKEMEARLKGISSGEGTPNSVSGR-RVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGG 180
           GKEMEARLKGISSGE TP S SGR RVDP+V+VEEKEPKEWVAQVEPGVLITFVSLP GG
Sbjct: 121 GKEMEARLKGISSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGG 180

Query: 181 NDLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIE- 240
           NDLKRIRFSRD+FNK QAQRWWA+NYDKVMELYNVQ+  RQAFPLPTPPRSEDE++K+E 
Sbjct: 181 NDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPPRSEDENAKVEY 240

Query: 241 SIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSG-LTSTPKLSS 300
             E++P TPPL  ERLPR ++RP G  A+YSSSDSL++  MQ +Q+ DSG L STPK+SS
Sbjct: 241 HPEDTPATPPLNKERLPRTIHRPPGL-AAYSSSDSLDHNSMQSQQFYDSGLLNSTPKVSS 300

Query: 301 ISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGK 360
           IS AKTETSSIDAS+RSSSSRDADRS E+S+SNASD+++EWVEQDEPGVYITI+ LPGGK
Sbjct: 301 ISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGK 360

Query: 361 RELRRVRFSREKFGEMHAKVWWEENRARIHEQY 371
           RELRRVRFSRE+FGEMHA++WWEENRARIHEQY
Sbjct: 361 RELRRVRFSRERFGEMHARLWWEENRARIHEQY 383

[Close]

BLAST of Carg18639-RA vs. TAIR 10
Match: AT3G14000.1 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein )

HSP 1 Score: 416.0 bits (1068), Expect = 3.2e-116
Identity = 233/385 (60.52%), Postives = 287/385 (74.55%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDS----LNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTCIA +K+L     GS  Q E+ +     +  P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQY 371
           SREKFGE +A++WWE+NRARI +QY
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQY 373

[Close]

BLAST of Carg18639-RA vs. TAIR 10
Match: AT3G14000.2 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein )

HSP 1 Score: 416.0 bits (1068), Expect = 3.2e-116
Identity = 233/385 (60.52%), Postives = 287/385 (74.55%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDS----LNGPGNKQQSVKSLTGQLRDMALKASGSY 60
           MLTCIA +K+L     GS  Q E+ +     +  P +KQ  +KSLT Q++DMA+KASG+Y
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ--IKSLTSQIKDMAVKASGAY 60

Query: 61  RTCNPCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGIS 120
           ++C PC+G    ++ ++  +S   ++S R ++AYKR+GS SST  +  GKEME+RLKG  
Sbjct: 61  KSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSST-PKILGKEMESRLKGFL 120

Query: 121 SGEGTPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVF 180
           SGEGTP S+SGR    V   EE E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR++F
Sbjct: 121 SGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMF 180

Query: 181 NKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTE 240
           +KWQAQ+WWAEN+DKVMELYNVQ+F++Q+ PLPTPPRSED SS+I+S +N P TPPL  E
Sbjct: 181 DKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQSTKNGPATPPLNKE 240

Query: 241 RLPRNLYRPTGAGASYSSSDSLEYQP---MQYRQYQDSGLTSTPKLSSISGAKTETSSID 300
                       G  Y+SS SL +QP    Q R +  SGL +TPKLSSISG KTETSS+D
Sbjct: 241 ---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGLATTPKLSSISGTKTETSSVD 300

Query: 301 ASMRSSSSR---DADRSG-ELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRF 360
            S RSS SR   +AD SG ELS+SNASD+E+EWVEQDE GVYITIRALP G RELRRVRF
Sbjct: 301 ESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRF 360

Query: 361 SREKFGEMHAKVWWEENRARIHEQY 371
           SREKFGE +A++WWE+NRARI +QY
Sbjct: 361 SREKFGETNARLWWEQNRARIQQQY 373

[Close]

BLAST of Carg18639-RA vs. TAIR 10
Match: AT1G54180.2 (BREVIS RADIX-like 3 )

HSP 1 Score: 404.4 bits (1038), Expect = 9.5e-113
Identity = 220/374 (58.82%), Postives = 276/374 (73.80%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCN 60
           MLTCIA +K+L     GS  + +E   + G    +Q++KSLT QL+DMA+KASG+Y+ C 
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60

Query: 61  PCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEG 120
           PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS EG
Sbjct: 61  PCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEEG 120

Query: 121 TPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDVFNKWQ 180
           TP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRFSR++FNKWQ
Sbjct: 121 TPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQ 180

Query: 181 AQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRSEDESSKIESIENSPVTPPLTTERLPR 240
           AQ+WW EN++KVMELYNVQ F++Q+ PL TPP SED  S+I+S+++SPVTPPL  ER  R
Sbjct: 181 AQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPVSEDGGSQIQSVKDSPVTPPLERERPHR 240

Query: 241 NLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLTSTPKLSSISGAKTETSSIDASMRSSS 300
           N+                            SG  STPKLSSISG KTETSSID S RSSS
Sbjct: 241 NI-------------------------PGSSGFASTPKLSSISGTKTETSSIDGSARSSS 300

Query: 301 SRDADRSGELSISNASDLESEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHAK 360
               DRS E+S+SNASD+ESEWVEQDEPG+YITIRALP G RELRRVRFSR+KFGE HA+
Sbjct: 301 ---VDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHAR 343

Query: 361 VWWEENRARIHEQY 371
           +WWE+NRARI +QY
Sbjct: 361 LWWEQNRARIQQQY 343

[Close]

BLAST of Carg18639-RA vs. TAIR 10
Match: AT1G54180.1 (BREVIS RADIX-like 3 )

HSP 1 Score: 388.3 bits (996), Expect = 7.1e-108
Identity = 219/400 (54.75%), Postives = 275/400 (68.75%), Query Frame = 0


Query: 1   MLTCIARSKKL---GDGSLSQIEEPDSLNGPGNKQQSVKSLTGQLRDMALKASGSYRTCN 60
           MLTCIA +K+L     GS  + +E   + G    +Q++KSLT QL+DMA+KASG+Y+ C 
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCK 60

Query: 61  PCAGPIPPSRLKN-CNSQPDADSDRIKWAYKRSGSLSSTKTRTWGKEMEARLKGISSGEG 120
           PC+G    ++ +N  +S   +DS R  ++Y+R+G+ +ST  + WG EME+RLKGISS EG
Sbjct: 61  PCSGTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATST-PKIWGNEMESRLKGISSEEG 120

Query: 121 TPNSVSGRRVDPVVYVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF--------- 180
           TP S+SG R + +V++E+ E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF         
Sbjct: 121 TPTSMSG-RTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYYR 180

Query: 181 -----------------SRDVFNKWQAQRWWAENYDKVMELYNVQRFDRQAFPLPTPPRS 240
                             R++FNKWQAQ+WW EN++KVMELYNVQ F++Q+ PL TPP S
Sbjct: 181 DQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQQSVPLQTPPVS 240

Query: 241 EDESSKIESIENSPVTPPLTTERLPRNLYRPTGAGASYSSSDSLEYQPMQYRQYQDSGLT 300
           ED  S+I+S+++SPVTPPL  ER  RN+                            SG  
Sbjct: 241 EDGGSQIQSVKDSPVTPPLERERPHRNI-------------------------PGSSGFA 300

Query: 301 STPKLSSISGAKTETSSIDASMRSSSSRDADRSGELSISNASDLESEWVEQDEPGVYITI 360
           STPKLSSISG KTETSSID S RSSS    DRS E+S+SNASD+ESEWVEQDEPG+YITI
Sbjct: 301 STPKLSSISGTKTETSSIDGSARSSS---VDRSEEVSVSNASDMESEWVEQDEPGIYITI 360

Query: 361 RALPGGKRELRRVRFSREKFGEMHAKVWWEENRARIHEQY 371
           RALP G RELRRVRFSR+KFGE HA++WWE+NRARI +QY
Sbjct: 361 RALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369

The following BLAST results are available for this feature:

BLAST of Carg18639-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021346.1	3.3e-208	100.00	Protein Brevis radix-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6586487.1	7.4e-208	99.73	Protein Brevis radix-like 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023537650.1	9.6e-208	99.73	protein Brevis radix-like 4 [Cucurbita pepo subsp. pepo] >XP_023537651.1 protein...	[more]
XP_022965520.1	4.8e-207	99.46	protein Brevis radix-like 4 isoform X1 [Cucurbita maxima]	[more]
XP_022938081.1	1.4e-206	99.19	protein Brevis radix-like 4 isoform X1 [Cucurbita moschata] >XP_022938082.1 prot...	[more]

BLAST of Carg18639-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ92	7.1e-137	68.19	Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1	[more]
Q8GYL9	4.5e-115	60.52	Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1	[more]
Q5HZ09	9.9e-107	54.75	Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2	[more]
Q6YUB8	1.6e-101	55.85	Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE...	[more]
Q17TI5	3.7e-69	43.80	Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2	[more]

BLAST of Carg18639-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNY5	2.3e-207	99.46	protein Brevis radix-like 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114654...	[more]
A0A6J1FC55	6.7e-207	99.19	protein Brevis radix-like 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S4E1T5	6.7e-199	95.41	protein Brevis radix-like 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498685 P...	[more]
A0A0A0LFQ5	1.3e-197	95.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000270 PE=3 SV=1	[more]
A0A6J1DN08	5.0e-194	93.01	protein Brevis radix-like 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Carg18639-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20540.1	5.0e-138	68.19	BREVIS RADIX-like 4	[more]
AT3G14000.1	3.2e-116	60.52	DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain ...	[more]
AT3G14000.2	3.2e-116	60.52	DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain ...	[more]
AT1G54180.2	9.5e-113	58.82	BREVIS RADIX-like 3	[more]
AT1G54180.1	7.1e-108	54.75	BREVIS RADIX-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013591	Brevis radix (BRX) domain	PFAM	PF08381	BRX	coord: 138..192 e-value: 5.6E-27 score: 92.9 coord: 315..370 e-value: 1.2E-28 score: 98.2
IPR013591	Brevis radix (BRX) domain	PROSITE	PS51514	BRX	coord: 316..370 score: 34.94529
IPR013591	Brevis radix (BRX) domain	PROSITE	PS51514	BRX	coord: 138..193 score: 30.393908
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	PFAM	PF13713	BRX_N	coord: 28..59 e-value: 4.5E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..308
None	No IPR available	PANTHER	PTHR46058:SF3	PROTEIN BREVIS RADIX-LIKE 4	coord: 1..370
IPR044532	Protein BREVIS RADIX-like	PANTHER	PTHR46058	PROTEIN BREVIS RADIX-LIKE 1	coord: 1..370

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18639	Carg18639	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18639-RA:6	Carg18639-RA:6	exon
Carg18639-RA:5	Carg18639-RA:5	exon
Carg18639-RA:4	Carg18639-RA:4	exon
Carg18639-RA:3	Carg18639-RA:3	exon
Carg18639-RA:2	Carg18639-RA:2	exon
Carg18639-RA:1	Carg18639-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18639-RA:cds	Carg18639-RA:cds_5	CDS
Carg18639-RA:cds	Carg18639-RA:cds_4	CDS
Carg18639-RA:cds	Carg18639-RA:cds_3	CDS
Carg18639-RA:cds	Carg18639-RA:cds_2	CDS
Carg18639-RA:cds	Carg18639-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18639-RA:five_prime_utr	Carg18639-RA:five_prime_utr_2	five_prime_UTR
Carg18639-RA:five_prime_utr	Carg18639-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18639-RA	Carg18639-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus