Carg18572-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18572-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Gibberellin regulated protein
Location	Carg_Chr07: 3023514 .. 3023907 (+)
Sequence length	285
RNA-Seq Expression	Carg18572-RA
Synteny	Carg18572-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTGGTTCTCTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCCTTCCTCCTCCAACATGCCATTGCTGATTCCTCTGCAACCTATGCTCCAAGTAATACAAATGCTTTACCATTAATATCAATACTATTAGCAATGAAGATATAACCCTTCATTCATCCAAGAGAATAACTGATTTATTGTTTTTCCTTTTTCTTTGGAAGGTTTTTGTGATTCAAAATGTGGGGCAAGATGTTTGAATGCAGGGGTGAAGGACAGATGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGTAAGTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGTCCTTGCTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA

mRNA sequence

ATGAAGTCTGGTTCTCTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCCTTCCTCCTCCAACATGCCATTGCTGATTCCTCTGCAACCTATGCTCCAAGTTTTTGTGATTCAAAATGTGGGGCAAGATGTTTGAATGCAGGGGTGAAGGACAGATGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGTAAGTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGTCCTTGCTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA

Coding sequence (CDS)

ATGAAGTCTGGTTCTCTCAGTTTGGTTCTTGTTTCATTGGTTCTGAGCTCCTTCCTCCTCCAACATGCCATTGCTGATTCCTCTGCAACCTATGCTCCAAGTTTTTGTGATTCAAAATGTGGGGCAAGATGTTTGAATGCAGGGGTGAAGGACAGATGTCTTAAGTATTGTGGACTCTGCTGCCAACAATGTAAGTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGTCCTTGCTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA

Protein sequence

MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Homology

[Close]

BLAST of Carg18572-RA vs. NCBI nr
Match: KAG7026958.1 (Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 2.4e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC
Sbjct: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. NCBI nr
Match: XP_022963307.1 (peamaclein-like [Cucurbita moschata])

HSP 1 Score: 193.4 bits (490), Expect = 9.1e-46
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKSGSLSLVLVSLVLSSFLLQHAIADS ATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC
Sbjct: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. NCBI nr
Match: XP_023003134.1 (peamaclein-like [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 7.7e-45
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKSGSLSLVLVSL+LSSFLL HAIADSSATY PSFCDSKCGARCLNAGVKDRC+KYCGLC
Sbjct: 1  MKSGSLSLVLVSLILSSFLLPHAIADSSATYVPSFCDSKCGARCLNAGVKDRCIKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. NCBI nr
Match: XP_038880848.1 (peamaclein-like [Benincasa hispida])

HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKS S+ LVL+SL+LSSFLLQ+AIADSS TYAPS CDSKCG RCLNAGVKDRCLKYCG+C
Sbjct: 1  MKSASVILVLLSLILSSFLLQYAIADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGIC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. NCBI nr
Match: XP_031742788.1 (peamaclein-like isoform X2 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKS S++LVL+SL+LSSF LQ+A ADSS TYAPS CDSKCG RCLNAGVKDRCLKYCGLC
Sbjct: 1  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.2e-29
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MK   L+L+LV+LV++  L+Q  +A S      SFCDSKC  RC  AG+ DRCLKYCG+C
Sbjct: 1  MKLFLLTLLLVTLVITPSLIQTTMAGS------SFCDSKCKLRCSKAGLADRCLKYCGIC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          C++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Sbjct: 61 CEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 34 SFCDSKCGARCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKC 93
          SFCDSKCG RC  AG ++RCLKYCG+CC++C CVPSGTYGNK ECPCYRD  NSKG  KC
Sbjct: 3  SFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKC 62

Query: 94 P 95
          P
Sbjct: 63 P 63

[Close]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-23
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 7   SLVLVSLVLSSFLLQHAIADSSATYAP---------SFCDSKCGARCLNAGVKDRCLKYC 66
           SL+L+S  L+S  +  A    +   AP          +C  KC  RC  AG+KDRCLKYC
Sbjct: 12  SLLLISSSLASATISDAFGSGAVAPAPQSKDGPALEKWCGQKCEGRCKEAGMKDRCLKYC 71

Query: 67  GLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
           G+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Sbjct: 72  GICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MK  ++ ++++SL+++S L   + ADSS       C  KC  RC  AG +DRCLKYC +C
Sbjct: 1  MKFPAVKVLIISLLITSSLFILSTADSSP------CGGKCNVRCSKAGRQDRCLKYCNIC 60

Query: 61 CQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          C++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 61 CEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 6  LSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK 65
          + LV+V   + S LL  + +  S+  A S C  KC  RC  AG  + CLKYC +CCQ+C 
Sbjct: 1  MKLVVVQFFIISLLLTSSFSVLSS--ADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCN 60

Query: 66 CVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CVPSGT+G+K ECPCYRD  NSKG SKCP
Sbjct: 61 CVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Carg18572-RA vs. ExPASy TrEMBL
Match: A0A6J1HEX9 (peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111463556 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.4e-46
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKSGSLSLVLVSLVLSSFLLQHAIADS ATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC
Sbjct: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSPATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. ExPASy TrEMBL
Match: A0A6J1KSF0 (peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111496836 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-45
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKSGSLSLVLVSL+LSSFLL HAIADSSATY PSFCDSKCGARCLNAGVKDRC+KYCGLC
Sbjct: 1  MKSGSLSLVLVSLILSSFLLPHAIADSSATYVPSFCDSKCGARCLNAGVKDRCIKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. ExPASy TrEMBL
Match: A0A1S3B1M5 (peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103484820 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.2e-40
Identity = 81/94 (86.17%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MKS S++LVL+S +LSSF LQ+  ADSS TYAPS CDSKCG RCLNAGVKDRCLKYCGLC
Sbjct: 1  MKSLSVTLVLLSFILSSFFLQYGTADSSTTYAPSVCDSKCGVRCLNAGVKDRCLKYCGLC 60

Query: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 94

[Close]

BLAST of Carg18572-RA vs. ExPASy TrEMBL
Match: A0A0A0KLG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493840 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAP-SFCDSKCGARCLNAGVKDRCLKYCGL 60
          MKS S++LVL+SL+LSSF LQ+A ADSS TYAP   CDSKCG RCLNAGVKDRCLKYCGL
Sbjct: 1  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGL 60

Query: 61 CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Sbjct: 61 CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95

[Close]

BLAST of Carg18572-RA vs. ExPASy TrEMBL
Match: A0A5N6QNF2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004086 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-31
Identity = 69/100 (69.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 1   MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAP------SFCDSKCGARCLNAGVKDRCL 60
           MK    +L+L+S++L S  LQ A+AD     AP      SFCDSKCGARC NAGVKDRCL
Sbjct: 1   MKLALATLLLISMLLRSSFLQFAMADPPTVAAPPTVAASSFCDSKCGARCANAGVKDRCL 60

Query: 61  KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
           +YCG+CC QCKCVPSGTYGNKSECPCYRD LNSKGK+KCP
Sbjct: 61  RYCGICCLQCKCVPSGTYGNKSECPCYRDMLNSKGKAKCP 100

[Close]

BLAST of Carg18572-RA vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 108.2 bits (269), Expect = 3.6e-24
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 7   SLVLVSLVLSSFLLQHAIADSSATYAP---------SFCDSKCGARCLNAGVKDRCLKYC 66
           SL+L+S  L+S  +  A    +   AP          +C  KC  RC  AG+KDRCLKYC
Sbjct: 12  SLLLISSSLASATISDAFGSGAVAPAPQSKDGPALEKWCGQKCEGRCKEAGMKDRCLKYC 71

Query: 67  GLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
           G+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Sbjct: 72  GICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Carg18572-RA vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 1  MKSGSLSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLC 60
          MK  ++ ++++SL+++S L   + ADSS       C  KC  RC  AG +DRCLKYC +C
Sbjct: 1  MKFPAVKVLIISLLITSSLFILSTADSSP------CGGKCNVRCSKAGRQDRCLKYCNIC 60

Query: 61 CQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          C++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 61 CEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Carg18572-RA vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.8e-22
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 6  LSLVLVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAGVKDRCLKYCGLCCQQCK 65
          + LV+V   + S LL  + +  S+  A S C  KC  RC  AG  + CLKYC +CCQ+C 
Sbjct: 1  MKLVVVQFFIISLLLTSSFSVLSS--ADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCN 60

Query: 66 CVPSGTYGNKSECPCYRDKLNSKGKSKCP 95
          CVPSGT+G+K ECPCYRD  NSKG SKCP
Sbjct: 61 CVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Carg18572-RA vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein )

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 10 LVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVP 69
          ++SL+L+S     + ADSSA      C  KC  RC  A    + CL+ C +CCQ+C CVP
Sbjct: 11 IISLLLTSSFYVLSSADSSA------CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVP 70

Query: 70 SGTYGNKSECPCYRDKLNSKGKSKCP 95
          SGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 71 SGTYGNKDECPCYRDMKNSKGGSKCP 90

[Close]

BLAST of Carg18572-RA vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein )

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-19
Identity = 46/86 (53.49%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 10 LVSLVLSSFLLQHAIADSSATYAPSFCDSKCGARCLNAG-VKDRCLKYCGLCCQQCKCVP 69
          ++SL+L+S     + ADSS       C  KC  RC  A    + CL+ C +CCQ+C CVP
Sbjct: 11 IISLLLTSSFYVLSSADSS-------CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVP 70

Query: 70 SGTYGNKSECPCYRDKLNSKGKSKCP 95
          SGTYGNK ECPCYRD  NSKG SKCP
Sbjct: 71 SGTYGNKDECPCYRDMKNSKGGSKCP 89

The following BLAST results are available for this feature:

BLAST of Carg18572-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026958.1	2.4e-46	100.00	Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022963307.1	9.1e-46	98.94	peamaclein-like [Cucurbita moschata]	[more]
XP_023003134.1	7.7e-45	95.74	peamaclein-like [Cucurbita maxima]	[more]
XP_038880848.1	6.7e-41	88.30	peamaclein-like [Benincasa hispida]	[more]
XP_031742788.1	1.2e-40	88.30	peamaclein-like isoform X2 [Cucumis sativus]	[more]

BLAST of Carg18572-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q948Z4	6.2e-29	65.96	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
P86888	2.0e-24	75.41	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]
O82328	5.0e-23	53.61	Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV...	[more]
Q8LFM2	3.3e-22	54.74	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
O80641	1.4e-20	53.93	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]

BLAST of Carg18572-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEX9	4.4e-46	98.94	peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111463556 PE=3 SV=1	[more]
A0A6J1KSF0	3.7e-45	95.74	peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111496836 PE=3 SV=1	[more]
A0A1S3B1M5	6.2e-40	86.17	peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103484820 PE=3 SV=1	[more]
A0A0A0KLG3	4.0e-39	86.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493840 PE=3 SV=1	[more]
A0A5N6QNF2	5.2e-31	69.00	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004086 PE=3 SV=1	[more]

BLAST of Carg18572-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14900.1	3.6e-24	53.61	Gibberellin-regulated family protein	[more]
AT5G59845.1	2.3e-23	54.74	Gibberellin-regulated family protein	[more]
AT2G39540.1	9.8e-22	53.93	Gibberellin-regulated family protein	[more]
AT1G10588.1	1.6e-19	54.65	Gibberellin-regulated family protein	[more]
AT1G10588.2	5.9e-19	53.49	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 35..94 e-value: 4.3E-22 score: 78.0
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..94
None	No IPR available	PANTHER	PTHR23201:SF54	SUBFAMILY NOT NAMED	coord: 6..94

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18572	Carg18572	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18572-RA:1	Carg18572-RA:1	exon
Carg18572-RA:2	Carg18572-RA:2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18572-RA:cds	Carg18572-RA:cds	CDS
Carg18572-RA:cds	Carg18572-RA:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18572-RA	Carg18572-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region