Carg18005-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18005-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Carg_Chr11: 3889239 .. 3892060 (-)
Sequence length	1152
RNA-Seq Expression	Carg18005-RA
Synteny	Carg18005-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGGTTGTGTTCTTCATCTGGGTTTCTTCATTTCTAGGCTGTTGAATGTTTTTTTGGTGTTTTCCCCTTTTTTGATTGTGGGTTCTTGTTTTTATTGGGAAATCTTGTGTTTGTGATTGTTTTTCTTCTCCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGGTTTGTGGGACTTAAGCTCTCTTGCTCATTGATTGATCTATGAACTTATGAACACACTAAATTCAGCTGAACTTGTTATGTCAATATCATGAACTGAAGAATTCGATCACTTCTACATTGAATGTTAGGCTGGAAGCTATGCTTTGTAACTCTAATTGATAGGACGTTCTTGTTTATCGTTTCCTTTTTGTAATATCTCATTATATGAATGTGATATCTATATCCTACTAAAAAGAGTGTCTGGAATGCTAGGCTTGTAGCCCATCTACAATTCTAAATGATCCTTGTGTGCAATGTTTTTGAGTTGAAATGTTCATTGCAGTTTTAAGCTGCTACTACATTTCAATCCTGCTTTTAATAATGTGTTTGATCTTATATCCTAGAGTTTGGAATGGTCATTCATGTTCGTGGTTGATGTACAATATCTAATATCCATTGGATGTAAACTAAACTTGTTATGTCAATTATCAACGAAAGGGTCATATCATTATGGGACTTTGTGATGTTGCACCATTTTCTCTGTTAAATGACACTAGAGCTAGAAATATGGCGGTAAGAGCCTAGACCCACGATATTGTCCTCTTTGAGTTTTCCCGTTTGGGCTTTCCTTCAAGGTTTTTAAGACATGTATGCTAGGAAGAGGTTTCCACACCCTTATAATGAATGCTTTGTTCTCCTCTTCAACCAATGTGGGATCTCACAATCCACCCCCTTTCGGGGCTTGGCGTCCTCATTGGCTCACCACCTGGTGTCTGGCTCTGAGACCTTTTTTTGATTTGTGTGTGTCATCCTTATGTAGGGTCATGCTAATCTTCTCTGTATCGTTTCAATTTTATTGGATGTCCCCTTTATTGTGAGATTCATCATTGGTTGAAGAGGGGAACGAAACATTCACTATAAGGGTTTGGAAACCTCTTCCTAGCAAACGTGTTTTAAATACCTTGAGGGGAAGCTCGAAAGGAAAATCCCAAAGAGGACAATATTTGCTAGCGGTGGACTTAGGCGGTTACAAATAATATTAGAGCCAATCACTGGACGGTGCGAGAAACTGGTTGGAGTAGGGCTAGACCCTCTCCATAGTAGACACATTTTAAAACTTTGAGGGGAAGCTCAAAGTGGAAAGCCCAAAAAGGACAATATTTGCTAGCAGTGGGCTTCGGCTGTTACAAATGATATTAGAGCCAGTCACCGGACGGTGCAAGACATTGGTCGGAGTAGGGCTAAACTCTCTCCATAGTAAACGCGTTTTAAAAACCTTGAGGGAAAAATTAAAAGAGAAAGCCCAAAAAGGACAATATCTACTAGTACATTTCATCTAGAATTGTGAACGAACATTCTACTTTCTTGTTTTTATTGGCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGTTTTAAATCCATTCCTTCATTTCTATATATAATGCGATGTCTGGTATCTACACCGTTCACTCTTCACACACGCAAGCCATTTCCTTTTCATTTCGTTTCGTTTCATGATTCTCAAAGACATTACGACATAGGAGACGTCGTTTCGTTGTTATAAACATCGCTTGGTTTGTCATTGGTAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGATACTGCTTTTACACCTCTCTGTATTTTATATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATGAGCGGTTTCTATTTGACTTAAAATTCATTGTCATAAAGATCAAAAGAAAAAGAGTATTTCTGAGATCCCGCATCGGTTGGAGAGGAGAACAAAACATCATTTATAAGAGTGTTGAAACCTCTCCCTAGCTTGAAGGGAAGCCCGAAAGG

mRNA sequence

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGATACTGCTTTTACACCTCTCTGTATTTTATATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATGAGCGGTTTCTATTTGACTTAAAATTCATTGTCATAAAGATCAAAAGAAAAAGAGTATTTCTGAGATCCCGCATCGGTTGGAGAGGAGAACAAAACATCATTTATAAGAGTGTTGAAACCTCTCCCTAGCTTGAAGGGAAGCCCGAAAGG

Coding sequence (CDS)

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGA

Protein sequence

MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

Homology

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BLAST of Carg18005-RA vs. NCBI nr
Match: KAG7022052.1 (hypothetical protein SDJN02_15781, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 593.2 bits (1528), Expect = 1.3e-165
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF 60
           MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF
Sbjct: 1   MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF 60

Query: 61  TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL 120
           TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL
Sbjct: 61  TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL 120

Query: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD 180
           IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD
Sbjct: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD 180

Query: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI 240
           EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI
Sbjct: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI 240

Query: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 300
           RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
Sbjct: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 300

[Close]

BLAST of Carg18005-RA vs. NCBI nr
Match: XP_022927378.1 (uncharacterized protein LOC111434216 [Cucurbita moschata])

HSP 1 Score: 568.5 bits (1464), Expect = 3.3e-158
Identity = 291/300 (97.00%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF 60
           MDKLIRNRIFTKSLN VVLGLKSFTVSSLSRSA ITVSSAC+SRMLHSLVQTTLPSPYQF
Sbjct: 1   MDKLIRNRIFTKSLNVVVLGLKSFTVSSLSRSASITVSSACSSRMLHSLVQTTLPSPYQF 60

Query: 61  TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL 120
           TSFRFNLHN DSINLLPKAFFPDFGRESKNS KTFIIF KRFSKSRSNRLNSSIVAHASL
Sbjct: 61  TSFRFNLHNIDSINLLPKAFFPDFGRESKNSSKTFIIFRKRFSKSRSNRLNSSIVAHASL 120

Query: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD 180
           IEAPILWAGRVCIFYALLRAGLAGSQSNPL SDLEFSDGESISDLGFSKWLEVVRGKPVD
Sbjct: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLFSDLEFSDGESISDLGFSKWLEVVRGKPVD 180

Query: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI 240
           EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL AIASLLSDDDHFIDATSHKGCQI
Sbjct: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLIAIASLLSDDDHFIDATSHKGCQI 240

Query: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 300
           RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRS PSV
Sbjct: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSCPSV 300

[Close]

BLAST of Carg18005-RA vs. NCBI nr
Match: KAG6588159.1 (hypothetical protein SDJN03_16724, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 515.4 bits (1326), Expect = 3.3e-142
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFP+FGRESKNSFKTFIIFHKRFSK
Sbjct: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPNFGRESKNSFKTFIIFHKRFSK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD
Sbjct: 61  SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

[Close]

BLAST of Carg18005-RA vs. NCBI nr
Match: XP_023531897.1 (uncharacterized protein LOC111794024 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 252/256 (98.44%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPK  FPDFGRESKNSFKTFIIFHKRFSK
Sbjct: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKRFSK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLR GLAGSQSNPLVSDLEFSDGE ISD
Sbjct: 61  SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDGEIISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

[Close]

BLAST of Carg18005-RA vs. NCBI nr
Match: XP_022967949.1 (uncharacterized protein LOC111467324 isoform X2 [Cucurbita maxima])

HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134
Identity = 242/256 (94.53%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSP QFT FRFNL +  SINLLPK  FPDFGRE+KNSFKTFIIFHKRF+K
Sbjct: 1   MLHSLVQTTLPSPCQFTYFRFNLQSLHSINLLPKTLFPDFGREAKNSFKTFIIFHKRFNK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSI+AHASLIEAPILWAGR+CIFYALLR GLAGSQSNPLVSDLEFSDGESISD
Sbjct: 61  SRSNRLNSSIIAHASLIEAPILWAGRLCIFYALLRVGLAGSQSNPLVSDLEFSDGESISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

[Close]

BLAST of Carg18005-RA vs. ExPASy TrEMBL
Match: A0A6J1EKU4 (uncharacterized protein LOC111434216 OS=Cucurbita moschata OX=3662 GN=LOC111434216 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.6e-158
Identity = 291/300 (97.00%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF 60
           MDKLIRNRIFTKSLN VVLGLKSFTVSSLSRSA ITVSSAC+SRMLHSLVQTTLPSPYQF
Sbjct: 1   MDKLIRNRIFTKSLNVVVLGLKSFTVSSLSRSASITVSSACSSRMLHSLVQTTLPSPYQF 60

Query: 61  TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL 120
           TSFRFNLHN DSINLLPKAFFPDFGRESKNS KTFIIF KRFSKSRSNRLNSSIVAHASL
Sbjct: 61  TSFRFNLHNIDSINLLPKAFFPDFGRESKNSSKTFIIFRKRFSKSRSNRLNSSIVAHASL 120

Query: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD 180
           IEAPILWAGRVCIFYALLRAGLAGSQSNPL SDLEFSDGESISDLGFSKWLEVVRGKPVD
Sbjct: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLFSDLEFSDGESISDLGFSKWLEVVRGKPVD 180

Query: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI 240
           EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL AIASLLSDDDHFIDATSHKGCQI
Sbjct: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLIAIASLLSDDDHFIDATSHKGCQI 240

Query: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 300
           RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRS PSV
Sbjct: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSCPSV 300

[Close]

BLAST of Carg18005-RA vs. ExPASy TrEMBL
Match: A0A6J1HY66 (uncharacterized protein LOC111467324 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467324 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.3e-135
Identity = 242/256 (94.53%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSP QFT FRFNL +  SINLLPK  FPDFGRE+KNSFKTFIIFHKRF+K
Sbjct: 1   MLHSLVQTTLPSPCQFTYFRFNLQSLHSINLLPKTLFPDFGREAKNSFKTFIIFHKRFNK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSI+AHASLIEAPILWAGR+CIFYALLR GLAGSQSNPLVSDLEFSDGESISD
Sbjct: 61  SRSNRLNSSIIAHASLIEAPILWAGRLCIFYALLRVGLAGSQSNPLVSDLEFSDGESISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

[Close]

BLAST of Carg18005-RA vs. ExPASy TrEMBL
Match: A0A6J1HS64 (uncharacterized protein LOC111467324 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467324 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.1e-130
Identity = 242/286 (84.62%), Postives = 247/286 (86.36%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSP QFT FRFNL +  SINLLPK  FPDFGRE+KNSFKTFIIFHKRF+K
Sbjct: 1   MLHSLVQTTLPSPCQFTYFRFNLQSLHSINLLPKTLFPDFGREAKNSFKTFIIFHKRFNK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVS------------ 164
           SRSNRLNSSI+AHASLIEAPILWAGR+CIFYALLR GLAGSQSNPLVS            
Sbjct: 61  SRSNRLNSSIIAHASLIEAPILWAGRLCIFYALLRVGLAGSQSNPLVSGCVLHLCFFISR 120

Query: 165 ------------------DLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP 224
                             DLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP
Sbjct: 121 LLNVFIGKSCVCDCFSSPDLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP 180

Query: 225 TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN 284
           TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN
Sbjct: 181 TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN 240

Query: 285 VRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 301
           VRALFDELPTPHL VEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
Sbjct: 241 VRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 286

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BLAST of Carg18005-RA vs. ExPASy TrEMBL
Match: A0A6J1DW78 (uncharacterized protein LOC111024066 OS=Momordica charantia OX=3673 GN=LOC111024066 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.3e-111
Identity = 207/261 (79.31%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           ML S+V TT  SPYQ+T+F F+ H+  SINLLP+  FP FG E  N+ K F+ FH+   K
Sbjct: 1   MLLSIVHTTFTSPYQYTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFS-----DG 164
           S  +   S     ASLIEAPILWAGR+CIFYALLRAG AGSQSNPLVSDL+ S      G
Sbjct: 61  SHFSTFTSLTTTRASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYGGGAAG 120

Query: 165 ESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 224
           ES SDLGFSKWLE VRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI
Sbjct: 121 ESGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 180

Query: 225 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPL 284
           ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPL
Sbjct: 181 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPL 240

Query: 285 NQKDYTKAEKLERVLRSGPSV 301
           NQKDYTKAEKLERVLRSGPSV
Sbjct: 241 NQKDYTKAEKLERVLRSGPSV 261

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BLAST of Carg18005-RA vs. ExPASy TrEMBL
Match: A0A6J1JIW4 (uncharacterized protein LOC111485505 OS=Cucurbita maxima OX=3661 GN=LOC111485505 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.3e-111
Identity = 211/261 (80.84%), Postives = 221/261 (84.67%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           ML SLV TT  SPYQ  +F F+  N  SINL P      FG ++KN+ KTF+ FHKR   
Sbjct: 1   MLLSLVHTTFTSPYQSITFPFDFQNLHSINLHPTTRSSGFGSQAKNALKTFLYFHKR--- 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFS-----DG 164
            RSN  NS+  A ASLIEAPILWAGR+CIFYALL+AGLAGSQSNPLVSDLE S     DG
Sbjct: 61  -RSNTFNSATTARASLIEAPILWAGRLCIFYALLKAGLAGSQSNPLVSDLELSSGGSADG 120

Query: 165 ESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 224
           ES SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI
Sbjct: 121 ESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 180

Query: 225 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPL 284
           ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPL
Sbjct: 181 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPL 240

Query: 285 NQKDYTKAEKLERVLRSGPSV 301
           N+ DYTKAEKLERVLRSGPSV
Sbjct: 241 NENDYTKAEKLERVLRSGPSV 257

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BLAST of Carg18005-RA vs. TAIR 10
Match: AT3G32930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-82
Identity = 163/262 (62.21%), Postives = 193/262 (73.66%), Query Frame = 0


Query: 48  SLVQTTLPSPYQFTSFRFNLHNFD-SINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSR 107
           SLVQ +  S ++  S    L N + S  LL K+ FP     SK +      + K+ S   
Sbjct: 4   SLVQVSSVSNFRSQSTIPTLSNSNPSCLLLQKSIFPG----SKLTLHRIFRYPKKISNGS 63

Query: 108 SNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVS-------DLEFSDG 167
           +          ASL+E PILWAGR+C+FYAL++AG AGS+SNP+VS       D+E+ DG
Sbjct: 64  T---------RASLLETPILWAGRICVFYALVKAGFAGSKSNPIVSGLDTGGVDVEYDDG 123

Query: 168 ESISDLGFSKWLEVVRG-KPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 227
              +DLGFSKWL+ ++G KP  +A DKRKLVSKWHPTTKGTLRRNYR+PSK+EG RLLKA
Sbjct: 124 ---ADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKA 183

Query: 228 IASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGP 287
           IASLLSDDDHF DATSHKGCQIRRESAHG+SVCCNNVRALFDELPTPHL VEITPFPAGP
Sbjct: 184 IASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAGP 243

Query: 288 LNQKDYTKAEKLERVLRSGPSV 301
           L + DY KAEKLER+LRSG ++
Sbjct: 244 LTENDYLKAEKLERILRSGANI 249

The following BLAST results are available for this feature:

BLAST of Carg18005-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022052.1	1.3e-165	100.00	hypothetical protein SDJN02_15781, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022927378.1	3.3e-158	97.00	uncharacterized protein LOC111434216 [Cucurbita moschata]	[more]
KAG6588159.1	3.3e-142	99.61	hypothetical protein SDJN03_16724, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531897.1	1.8e-140	98.44	uncharacterized protein LOC111794024 [Cucurbita pepo subsp. pepo]	[more]
XP_022967949.1	1.5e-134	94.53	uncharacterized protein LOC111467324 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg18005-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18005-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKU4	1.6e-158	97.00	uncharacterized protein LOC111434216 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A6J1HY66	7.3e-135	94.53	uncharacterized protein LOC111467324 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HS64	4.1e-130	84.62	uncharacterized protein LOC111467324 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DW78	3.3e-111	79.31	uncharacterized protein LOC111024066 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1JIW4	4.3e-111	80.84	uncharacterized protein LOC111485505 OS=Cucurbita maxima OX=3661 GN=LOC111485505...	[more]

BLAST of Carg18005-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32930.1	1.4e-82	62.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37229	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 45..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18005	Carg18005	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18005-RA:4	Carg18005-RA:4	exon
Carg18005-RA:3	Carg18005-RA:3	exon
Carg18005-RA:2	Carg18005-RA:2	exon
Carg18005-RA:1	Carg18005-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18005-RA:three_prime_utr	Carg18005-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18005-RA:cds	Carg18005-RA:cds_4	CDS
Carg18005-RA:cds	Carg18005-RA:cds_3	CDS
Carg18005-RA:cds	Carg18005-RA:cds_2	CDS
Carg18005-RA:cds	Carg18005-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18005-RA	Carg18005-RA-protein	polypeptide