Carg17950-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17950-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr10: 922940 .. 924358 (+)
Sequence length1419
RNA-Seq ExpressionCarg17950-RA
SyntenyCarg17950-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCACGCCAGATGTTCGATGAAAGGTCGCTGAGACGATGCGTCTCATTGTTGAAGTTAAAATGGGATTGCCTCTTTGTGCAATCCGTCTGTACGCAGCATCGCTTTTGTTCCCTTCATTCCACCGTCAAAAATGGAGCTTCTGTGTCAAAACTGTGTGAAGTGGTTTCGTGCACGATCGGAGGGTTAGATGAATTGGAAGCCACTCTGAACAAGAGCACAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCGTGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGATAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTCACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTCCTCAGGTGCCTCTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAGCATTGCTCCCAATTCAATCAGTTATAACATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTCGAGACAATGAAGCAAACCGGTTGTCCTCCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAAGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTATTCAAGCCAACAAGAAAGATTGACAATCAAAATCTTGAAGAATCCAATAGAGCTGAGAAGCAGAACTAA

mRNA sequence

ATGAACGCACGCCAGATGTTCGATGAAAGGTCGCTGAGACGATGCGTCTCATTGTTGAAGTTAAAATGGGATTGCCTCTTTGTGCAATCCGTCTGTACGCAGCATCGCTTTTGTTCCCTTCATTCCACCGTCAAAAATGGAGCTTCTGTGTCAAAACTGTGTGAAGTGGTTTCGTGCACGATCGGAGGGTTAGATGAATTGGAAGCCACTCTGAACAAGAGCACAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCGTGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGATAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTCACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTCCTCAGGTGCCTCTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAGCATTGCTCCCAATTCAATCAGTTATAACATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTCGAGACAATGAAGCAAACCGGTTGTCCTCCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAAGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTATTCAAGCCAACAAGAAAGATTGACAATCAAAATCTTGAAGAATCCAATAGAGCTGAGAAGCAGAACTAA

Coding sequence (CDS)

ATGAACGCACGCCAGATGTTCGATGAAAGGTCGCTGAGACGATGCGTCTCATTGTTGAAGTTAAAATGGGATTGCCTCTTTGTGCAATCCGTCTGTACGCAGCATCGCTTTTGTTCCCTTCATTCCACCGTCAAAAATGGAGCTTCTGTGTCAAAACTGTGTGAAGTGGTTTCGTGCACGATCGGAGGGTTAGATGAATTGGAAGCCACTCTGAACAAGAGCACAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCGTGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGATAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTCACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTCCTCAGGTGCCTCTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAGCATTGCTCCCAATTCAATCAGTTATAACATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTCGAGACAATGAAGCAAACCGGTTGTCCTCCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAAGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTATTCAAGCCAACAAGAAAGATTGACAATCAAAATCTTGAAGAATCCAATAGAGCTGAGAAGCAGAACTAA

Protein sequence

MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN
Homology
BLAST of Carg17950-RA vs. NCBI nr
Match: KAG7023207.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 956.1 bits (2470), Expect = 1.2e-274
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN
Sbjct: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 472

BLAST of Carg17950-RA vs. NCBI nr
Match: XP_022921576.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita moschata])

HSP 1 Score: 945.3 bits (2442), Expect = 2.1e-271
Identity = 468/472 (99.15%), Postives = 470/472 (99.58%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479

BLAST of Carg17950-RA vs. NCBI nr
Match: KAG6589519.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 940.6 bits (2430), Expect = 5.1e-270
Identity = 466/472 (98.73%), Postives = 468/472 (99.15%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCT HRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTLHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479

BLAST of Carg17950-RA vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 925.2 bits (2390), Expect = 2.2e-265
Identity = 458/472 (97.03%), Postives = 461/472 (97.67%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+AR MFDE SLRRCVSLLKLKWD  FVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQNLEE NRAEKQN
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQN 479

BLAST of Carg17950-RA vs. NCBI nr
Match: XP_023516447.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 914.8 bits (2363), Expect = 3.0e-262
Identity = 453/472 (95.97%), Postives = 459/472 (97.25%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+ARQMFDE SLRRCVSL KLKW   FVQSVCT HRFCSLHSTV+NG SVSKLCEVVSCT
Sbjct: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFS+NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY+IAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQN 479

BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.3e-163
Identity = 267/419 (63.72%), Postives = 342/419 (81.62%), Query Frame = 0

Query: 37  FCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPN 96
           FCS H   ++  ++ ++  +VS  +GGLD+LE  LN+ +VS +S+LVTQVI+SCKNE   
Sbjct: 24  FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83

Query: 97  RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 156
           RRLLRFFSWS K L   L D++FNY +R+ A+KKD+TA+ ILLSDL+K  RAMD QTF +
Sbjct: 84  RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143

Query: 157 VAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 216
           VAE LVK+ +E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203

Query: 217 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPS 276
           SG    +YRSLL+GWS+Q+N KEARR++++MKS G  PDLF +N+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263

Query: 277 GLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISY 336
           GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MK++GC PD  SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323

Query: 337 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 396
           Y V RVL+L+GRFGKG +IV+EMIE G  P+RKFYYDLIG+LCGVE   +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383

Query: 397 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR 456
           SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS  +LDPS+T+VFKP +
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMK 442

BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.9e-42
Identity = 109/403 (27.05%), Postives = 197/403 (48.88%), Query Frame = 0

Query: 71  LNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKK 130
           L+ S ++    L+ Q ++   +    R  L F  W     N    DE  ++ +  F ++K
Sbjct: 100 LSFSHITPNPDLILQTLN--LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK 159

Query: 131 DYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDK-YKCPHDQFTV 190
           D+     +L  + K +    G+T     + LV+  R  +    F+ ++  Y    D+ ++
Sbjct: 160 DFKG---MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL 219

Query: 191 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 250
           T ++  LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM  
Sbjct: 220 TLVVKKLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSR 279

Query: 251 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 310
            G      +YN  L C+C+   KK+P  L PE   V++EM    +  N+ ++N+L++ L 
Sbjct: 280 GGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLC 339

Query: 311 RARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPD 370
           + RR +E+  +   M + GC PD  +Y ++ R L+ + R G+G  ++++M   G   + +
Sbjct: 340 KIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLN 399

Query: 371 RKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWE 430
           +K YY  + ILCG+E  ++A+ +F+ MK +        YD+L+ K+C          L++
Sbjct: 400 KKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYK 459

Query: 431 EAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEK 471
           EA   G+ +      +DP   K  K T+++D+   +     EK
Sbjct: 460 EAAKKGIAVSPKEYRVDPRFMK--KKTKEVDSNVKKRETLPEK 494

BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.5e-27
Identity = 99/406 (24.38%), Postives = 174/406 (42.86%), Query Frame = 0

Query: 26  LFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQ 85
           LF +S+CT     +L     + A+++KL  ++S       + +  L+  T   T +LV  
Sbjct: 4   LFSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNS 63

Query: 86  VIDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKK 145
           V+    N  P  + L+FF +        + D   F+ AI + A+   +  +  L+  ++ 
Sbjct: 64  VLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS 123

Query: 146 ARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKR 205
            R     +TF +VAE      + D+A+ LF N+ ++ C  D  +   I+  LC     ++
Sbjct: 124 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 183

Query: 206 AEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLR 265
           A  +    + + S   +  Y  +L GW + K T +A  +LKEM   G  P+L +YNT L+
Sbjct: 184 AYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 243

Query: 266 CLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETM 325
                                                        RA +++ +      M
Sbjct: 244 GFF------------------------------------------RAGQIRHAWEFFLEM 303

Query: 326 KQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESE 385
           K+  C  D ++Y  V     ++G   +   + +EMI EG++P    Y  +I +LC  ++ 
Sbjct: 304 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 359

Query: 386 KYALELFEKMKRSSLGGYGP---VYDVLIPKLCRGGDFEMGRQLWE 428
           + A+ +FE+M R    GY P    Y+VLI  L   G+F  G +L +
Sbjct: 364 ENAVVMFEEMVRR---GYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359

BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.2e-25
Identity = 78/313 (24.92%), Postives = 138/313 (44.09%), Query Frame = 0

Query: 150 DGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 209
           D  T+  V   L K+    EA+ +   +    C  +  T   +I+ LC +   + A  + 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 210 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQ 269
                K      C + SL+ G  + +N + A  + +EM+S G  PD F+YN  +  LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 270 NLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGC 329
                  G + EALN++ +M     A + I+YN L+    +A + +E+  I + M+  G 
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508

Query: 330 PPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 389
             + ++Y  +   L  S R     +++++MI EG  PD+  Y  L+   C     K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568

Query: 390 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 449
           + + M  +        Y  LI  LC+ G  E+  +L       G+ L  +    +P I  
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628

Query: 450 VFKPTRKIDNQNL 463
           +F+  +  +  NL
Sbjct: 629 LFRKRKTTEAINL 632

BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-24
Identity = 84/370 (22.70%), Postives = 167/370 (45.14%), Query Frame = 0

Query: 50  VSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKK 109
           + K+C+ ++      +++   L+K  V +T SLV QV+    N     +   FF W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWANSQ 161

Query: 110 LNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMDRE 169
             +      +N  + +  + +++  +  L++++ K    + +   T   V   L K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 170 DEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRS 229
           ++A+  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 230 LLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVM 289
           L++G+   +   +AR ++  MK     PD+ +Y +F+   C++       G       ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEML 341

Query: 290 MEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLS 349
            EMR     PN ++Y I++  LG++++V E+  + E MK+ GC PD   Y  +  +L  +
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 350 GRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVY 409
           GRF     I E+M  +G+  D   Y  +I        ++ AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 410 DVLIP--KLC 415
           +   P  K+C
Sbjct: 462 ETYAPLLKMC 461

BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 9.9e-272
Identity = 468/472 (99.15%), Postives = 470/472 (99.58%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479

BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 1.1e-265
Identity = 458/472 (97.03%), Postives = 461/472 (97.67%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+AR MFDE SLRRCVSLLKLKWD  FVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQNLEE NRAEKQN
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQN 479

BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 832.0 bits (2148), Expect = 1.2e-237
Identity = 403/472 (85.38%), Postives = 437/472 (92.58%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+AR +FDE SLRRCVSLLKLKWD    QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELE++LNK T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
            AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCL + RRVKESC+ILE MK+TGC PDC+SYYL+ARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGL PDRKFYYDLIGILCGVE   YALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQN 472

BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 402/472 (85.17%), Postives = 436/472 (92.37%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+AR MFDE  LRRCVSLLKLKWD    QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELE++LN+ T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCL + RRVKESCRILE MK++GC PDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGL PDRKFYY+LIGILCGVE   YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQN 472

BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match: A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 402/472 (85.17%), Postives = 436/472 (92.37%), Query Frame = 0

Query: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
           M+AR MFDE  LRRCVSLLKLKWD    QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
           IGGLDELE++LN+ T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
           YNILLSCL + RRVKESCRILE MK++GC PDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           EEGL PDRKFYY+LIGILCGVE   YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQN 472

BLAST of Carg17950-RA vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 575.9 bits (1483), Expect = 3.0e-164
Identity = 267/419 (63.72%), Postives = 342/419 (81.62%), Query Frame = 0

Query: 37  FCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPN 96
           FCS H   ++  ++ ++  +VS  +GGLD+LE  LN+ +VS +S+LVTQVI+SCKNE   
Sbjct: 24  FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83

Query: 97  RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 156
           RRLLRFFSWS K L   L D++FNY +R+ A+KKD+TA+ ILLSDL+K  RAMD QTF +
Sbjct: 84  RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143

Query: 157 VAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 216
           VAE LVK+ +E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203

Query: 217 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPS 276
           SG    +YRSLL+GWS+Q+N KEARR++++MKS G  PDLF +N+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263

Query: 277 GLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISY 336
           GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MK++GC PD  SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323

Query: 337 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 396
           Y V RVL+L+GRFGKG +IV+EMIE G  P+RKFYYDLIG+LCGVE   +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383

Query: 397 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR 456
           SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS  +LDPS+T+VFKP +
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMK 442

BLAST of Carg17950-RA vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-43
Identity = 109/403 (27.05%), Postives = 197/403 (48.88%), Query Frame = 0

Query: 71  LNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKK 130
           L+ S ++    L+ Q ++   +    R  L F  W     N    DE  ++ +  F ++K
Sbjct: 100 LSFSHITPNPDLILQTLN--LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK 159

Query: 131 DYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDK-YKCPHDQFTV 190
           D+     +L  + K +    G+T     + LV+  R  +    F+ ++  Y    D+ ++
Sbjct: 160 DFKG---MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL 219

Query: 191 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 250
           T ++  LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM  
Sbjct: 220 TLVVKKLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSR 279

Query: 251 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 310
            G      +YN  L C+C+   KK+P  L PE   V++EM    +  N+ ++N+L++ L 
Sbjct: 280 GGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLC 339

Query: 311 RARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPD 370
           + RR +E+  +   M + GC PD  +Y ++ R L+ + R G+G  ++++M   G   + +
Sbjct: 340 KIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLN 399

Query: 371 RKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWE 430
           +K YY  + ILCG+E  ++A+ +F+ MK +        YD+L+ K+C          L++
Sbjct: 400 KKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYK 459

Query: 431 EAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEK 471
           EA   G+ +      +DP   K  K T+++D+   +     EK
Sbjct: 460 EAAKKGIAVSPKEYRVDPRFMK--KKTKEVDSNVKKRETLPEK 494

BLAST of Carg17950-RA vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-28
Identity = 99/406 (24.38%), Postives = 174/406 (42.86%), Query Frame = 0

Query: 26  LFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQ 85
           LF +S+CT     +L     + A+++KL  ++S       + +  L+  T   T +LV  
Sbjct: 4   LFSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNS 63

Query: 86  VIDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKK 145
           V+    N  P  + L+FF +        + D   F+ AI + A+   +  +  L+  ++ 
Sbjct: 64  VLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS 123

Query: 146 ARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKR 205
            R     +TF +VAE      + D+A+ LF N+ ++ C  D  +   I+  LC     ++
Sbjct: 124 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 183

Query: 206 AEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLR 265
           A  +    + + S   +  Y  +L GW + K T +A  +LKEM   G  P+L +YNT L+
Sbjct: 184 AYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 243

Query: 266 CLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETM 325
                                                        RA +++ +      M
Sbjct: 244 GFF------------------------------------------RAGQIRHAWEFFLEM 303

Query: 326 KQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESE 385
           K+  C  D ++Y  V     ++G   +   + +EMI EG++P    Y  +I +LC  ++ 
Sbjct: 304 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 359

Query: 386 KYALELFEKMKRSSLGGYGP---VYDVLIPKLCRGGDFEMGRQLWE 428
           + A+ +FE+M R    GY P    Y+VLI  L   G+F  G +L +
Sbjct: 364 ENAVVMFEEMVRR---GYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359

BLAST of Carg17950-RA vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-26
Identity = 78/313 (24.92%), Postives = 138/313 (44.09%), Query Frame = 0

Query: 150 DGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 209
           D  T+  V   L K+    EA+ +   +    C  +  T   +I+ LC +   + A  + 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 210 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQ 269
                K      C + SL+ G  + +N + A  + +EM+S G  PD F+YN  +  LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 270 NLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGC 329
                  G + EALN++ +M     A + I+YN L+    +A + +E+  I + M+  G 
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508

Query: 330 PPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 389
             + ++Y  +   L  S R     +++++MI EG  PD+  Y  L+   C     K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568

Query: 390 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 449
           + + M  +        Y  LI  LC+ G  E+  +L       G+ L  +    +P I  
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628

Query: 450 VFKPTRKIDNQNL 463
           +F+  +  +  NL
Sbjct: 629 LFRKRKTTEAINL 632

BLAST of Carg17950-RA vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-25
Identity = 84/370 (22.70%), Postives = 167/370 (45.14%), Query Frame = 0

Query: 50  VSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKK 109
           + K+C+ ++      +++   L+K  V +T SLV QV+    N     +   FF W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWANSQ 161

Query: 110 LNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMDRE 169
             +      +N  + +  + +++  +  L++++ K    + +   T   V   L K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 170 DEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRS 229
           ++A+  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 230 LLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVM 289
           L++G+   +   +AR ++  MK     PD+ +Y +F+   C++       G       ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEML 341

Query: 290 MEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLS 349
            EMR     PN ++Y I++  LG++++V E+  + E MK+ GC PD   Y  +  +L  +
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 350 GRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVY 409
           GRF     I E+M  +G+  D   Y  +I        ++ AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 410 DVLIP--KLC 415
           +   P  K+C
Sbjct: 462 ETYAPLLKMC 461

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7023207.11.2e-274100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022921576.12.1e-27199.15pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
KAG6589519.15.1e-27098.73Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022987424.12.2e-26597.03pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
XP_023516447.13.0e-26295.97pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9FLJ64.3e-16363.72Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
Q9FME44.9e-4227.05Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
Q9S7R44.5e-2724.38Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
Q9LFF13.2e-2524.92Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9LUJ42.1e-2422.70Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1E1S09.9e-27299.15pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... [more]
A0A6J1JIV31.1e-26597.03pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... [more]
A0A0A0LPF41.2e-23785.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1[more]
A0A5A7US523.0e-23685.17Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BV553.0e-23685.17pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT5G61370.13.0e-16463.72Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G60960.13.5e-4327.05Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74900.13.2e-2824.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.12.3e-2624.92Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22670.11.5e-2522.70Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 296..336
e-value: 3.9E-8
score: 33.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 335..367
e-value: 0.0011
score: 17.0
coord: 299..333
e-value: 1.1E-8
score: 32.7
coord: 223..255
e-value: 9.8E-4
score: 17.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 224..264
e-value: 3.8E-5
score: 23.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 297..331
score: 12.123256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 8.801982
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 220..442
e-value: 5.3E-35
score: 123.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..215
e-value: 7.7E-13
score: 50.4
NoneNo IPR availablePANTHERPTHR47938:SF9PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 35..469
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 35..469

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg17950Carg17950gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17950-RA:1Carg17950-RA:1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17950-RA:cdsCarg17950-RA:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg17950-RACarg17950-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding