Homology
BLAST of Carg17950-RA vs. NCBI nr
Match:
KAG7023207.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 956.1 bits (2470), Expect = 1.2e-274
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN
Sbjct: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 472
BLAST of Carg17950-RA vs. NCBI nr
Match:
XP_022921576.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita moschata])
HSP 1 Score: 945.3 bits (2442), Expect = 2.1e-271
Identity = 468/472 (99.15%), Postives = 470/472 (99.58%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479
BLAST of Carg17950-RA vs. NCBI nr
Match:
KAG6589519.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 940.6 bits (2430), Expect = 5.1e-270
Identity = 466/472 (98.73%), Postives = 468/472 (99.15%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCT HRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTLHRFCSLHSTVKNGASVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68 IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479
BLAST of Carg17950-RA vs. NCBI nr
Match:
XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])
HSP 1 Score: 925.2 bits (2390), Expect = 2.2e-265
Identity = 458/472 (97.03%), Postives = 461/472 (97.67%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+AR MFDE SLRRCVSLLKLKWD FVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8 MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH LEDEDFN
Sbjct: 68 IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQNLEE NRAEKQN
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQN 479
BLAST of Carg17950-RA vs. NCBI nr
Match:
XP_023516447.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 914.8 bits (2363), Expect = 3.0e-262
Identity = 453/472 (95.97%), Postives = 459/472 (97.25%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+ARQMFDE SLRRCVSL KLKW FVQSVCT HRFCSLHSTV+NG SVSKLCEVVSCT
Sbjct: 8 MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELE TLNK VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68 IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFS+NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY+IAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQN 479
BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match:
Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)
HSP 1 Score: 575.9 bits (1483), Expect = 4.3e-163
Identity = 267/419 (63.72%), Postives = 342/419 (81.62%), Query Frame = 0
Query: 37 FCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPN 96
FCS H ++ ++ ++ +VS +GGLD+LE LN+ +VS +S+LVTQVI+SCKNE
Sbjct: 24 FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83
Query: 97 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 156
RRLLRFFSWS K L L D++FNY +R+ A+KKD+TA+ ILLSDL+K RAMD QTF +
Sbjct: 84 RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143
Query: 157 VAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 216
VAE LVK+ +E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203
Query: 217 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPS 276
SG +YRSLL+GWS+Q+N KEARR++++MKS G PDLF +N+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263
Query: 277 GLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISY 336
GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MK++GC PD SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323
Query: 337 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 396
Y V RVL+L+GRFGKG +IV+EMIE G P+RKFYYDLIG+LCGVE +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
Query: 397 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR 456
SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS +LDPS+T+VFKP +
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMK 442
BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match:
Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)
HSP 1 Score: 173.7 bits (439), Expect = 4.9e-42
Identity = 109/403 (27.05%), Postives = 197/403 (48.88%), Query Frame = 0
Query: 71 LNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKK 130
L+ S ++ L+ Q ++ + R L F W N DE ++ + F ++K
Sbjct: 100 LSFSHITPNPDLILQTLN--LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK 159
Query: 131 DYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDK-YKCPHDQFTV 190
D+ +L + K + G+T + LV+ R + F+ ++ Y D+ ++
Sbjct: 160 DFKG---MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL 219
Query: 191 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 250
T ++ LC KGHA AE +V + ++I + I L+ GW I + EA R+ EM
Sbjct: 220 TLVVKKLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSR 279
Query: 251 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 310
G +YN L C+C+ KK+P L PE V++EM + N+ ++N+L++ L
Sbjct: 280 GGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLC 339
Query: 311 RARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPD 370
+ RR +E+ + M + GC PD +Y ++ R L+ + R G+G ++++M G + +
Sbjct: 340 KIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLN 399
Query: 371 RKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWE 430
+K YY + ILCG+E ++A+ +F+ MK + YD+L+ K+C L++
Sbjct: 400 KKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYK 459
Query: 431 EAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEK 471
EA G+ + +DP K K T+++D+ + EK
Sbjct: 460 EAAKKGIAVSPKEYRVDPRFMK--KKTKEVDSNVKKRETLPEK 494
BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match:
Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 4.5e-27
Identity = 99/406 (24.38%), Postives = 174/406 (42.86%), Query Frame = 0
Query: 26 LFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQ 85
LF +S+CT +L + A+++KL ++S + + L+ T T +LV
Sbjct: 4 LFSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNS 63
Query: 86 VIDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKK 145
V+ N P + L+FF + + D F+ AI + A+ + + L+ ++
Sbjct: 64 VLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS 123
Query: 146 ARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKR 205
R +TF +VAE + D+A+ LF N+ ++ C D + I+ LC ++
Sbjct: 124 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 183
Query: 206 AEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLR 265
A + + + S + Y +L GW + K T +A +LKEM G P+L +YNT L+
Sbjct: 184 AYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 243
Query: 266 CLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETM 325
RA +++ + M
Sbjct: 244 GFF------------------------------------------RAGQIRHAWEFFLEM 303
Query: 326 KQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESE 385
K+ C D ++Y V ++G + + +EMI EG++P Y +I +LC ++
Sbjct: 304 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 359
Query: 386 KYALELFEKMKRSSLGGYGP---VYDVLIPKLCRGGDFEMGRQLWE 428
+ A+ +FE+M R GY P Y+VLI L G+F G +L +
Sbjct: 364 ENAVVMFEEMVRR---GYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 3.2e-25
Identity = 78/313 (24.92%), Postives = 138/313 (44.09%), Query Frame = 0
Query: 150 DGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 209
D T+ V L K+ EA+ + + C + T +I+ LC + + A +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 210 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQ 269
K C + SL+ G + +N + A + +EM+S G PD F+YN + LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 270 NLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGC 329
G + EALN++ +M A + I+YN L+ +A + +E+ I + M+ G
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508
Query: 330 PPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 389
+ ++Y + L S R +++++MI EG PD+ Y L+ C K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568
Query: 390 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 449
+ + M + Y LI LC+ G E+ +L G+ L + +P I
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628
Query: 450 VFKPTRKIDNQNL 463
+F+ + + NL
Sbjct: 629 LFRKRKTTEAINL 632
BLAST of Carg17950-RA vs. ExPASy Swiss-Prot
Match:
Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 2.1e-24
Identity = 84/370 (22.70%), Postives = 167/370 (45.14%), Query Frame = 0
Query: 50 VSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKK 109
+ K+C+ ++ +++ L+K V +T SLV QV+ N + FF W+ +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWANSQ 161
Query: 110 LNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMDRE 169
+ +N + + + +++ + L++++ K + + T V L K +
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221
Query: 170 DEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRS 229
++A+ F ++K Y D + +++ AL + + A V L D I + +
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281
Query: 230 LLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVM 289
L++G+ + +AR ++ MK PD+ +Y +F+ C++ G ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEML 341
Query: 290 MEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLS 349
EMR PN ++Y I++ LG++++V E+ + E MK+ GC PD Y + +L +
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401
Query: 350 GRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVY 409
GRF I E+M +G+ D Y +I ++ AL L ++M+ P
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461
Query: 410 DVLIP--KLC 415
+ P K+C
Sbjct: 462 ETYAPLLKMC 461
BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match:
A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)
HSP 1 Score: 945.3 bits (2442), Expect = 9.9e-272
Identity = 468/472 (99.15%), Postives = 470/472 (99.58%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 68 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEES+RAEKQN
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQN 479
BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match:
A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)
HSP 1 Score: 925.2 bits (2390), Expect = 1.1e-265
Identity = 458/472 (97.03%), Postives = 461/472 (97.67%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+AR MFDE SLRRCVSLLKLKWD FVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT
Sbjct: 8 MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELEATLNK TVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH LEDEDFN
Sbjct: 68 IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQNLEE NRAEKQN
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQN 479
BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match:
A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)
HSP 1 Score: 832.0 bits (2148), Expect = 1.2e-237
Identity = 403/472 (85.38%), Postives = 437/472 (92.58%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+AR +FDE SLRRCVSLLKLKWD QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1 MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELE++LNK T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61 IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCL + RRVKESC+ILE MK+TGC PDC+SYYL+ARVLFL+GRFGKG IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGL PDRKFYYDLIGILCGVE YALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQN 472
BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match:
A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)
HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 402/472 (85.17%), Postives = 436/472 (92.37%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+AR MFDE LRRCVSLLKLKWD QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1 MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELE++LN+ T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61 IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCL + RRVKESCRILE MK++GC PDC+SYYLVARVLFL+GRFGKG IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGL PDRKFYY+LIGILCGVE YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQN 472
BLAST of Carg17950-RA vs. ExPASy TrEMBL
Match:
A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)
HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 402/472 (85.17%), Postives = 436/472 (92.37%), Query Frame = 0
Query: 1 MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60
M+AR MFDE LRRCVSLLKLKWD QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 1 MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
Query: 61 IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120
IGGLDELE++LN+ T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61 IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
Query: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180
AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
Query: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240
KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
Query: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300
RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
Query: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360
YNILLSCL + RRVKESCRILE MK++GC PDC+SYYLVARVLFL+GRFGKG IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
Query: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
EEGL PDRKFYY+LIGILCGVE YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
Query: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 473
MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE N AEKQN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQN 472
BLAST of Carg17950-RA vs. TAIR 10
Match:
AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 575.9 bits (1483), Expect = 3.0e-164
Identity = 267/419 (63.72%), Postives = 342/419 (81.62%), Query Frame = 0
Query: 37 FCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPN 96
FCS H ++ ++ ++ +VS +GGLD+LE LN+ +VS +S+LVTQVI+SCKNE
Sbjct: 24 FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83
Query: 97 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 156
RRLLRFFSWS K L L D++FNY +R+ A+KKD+TA+ ILLSDL+K RAMD QTF +
Sbjct: 84 RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143
Query: 157 VAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 216
VAE LVK+ +E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203
Query: 217 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPS 276
SG +YRSLL+GWS+Q+N KEARR++++MKS G PDLF +N+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263
Query: 277 GLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISY 336
GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MK++GC PD SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323
Query: 337 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 396
Y V RVL+L+GRFGKG +IV+EMIE G P+RKFYYDLIG+LCGVE +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
Query: 397 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR 456
SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS +LDPS+T+VFKP +
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMK 442
BLAST of Carg17950-RA vs. TAIR 10
Match:
AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 173.7 bits (439), Expect = 3.5e-43
Identity = 109/403 (27.05%), Postives = 197/403 (48.88%), Query Frame = 0
Query: 71 LNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKK 130
L+ S ++ L+ Q ++ + R L F W N DE ++ + F ++K
Sbjct: 100 LSFSHITPNPDLILQTLN--LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK 159
Query: 131 DYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDK-YKCPHDQFTV 190
D+ +L + K + G+T + LV+ R + F+ ++ Y D+ ++
Sbjct: 160 DFKG---MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL 219
Query: 191 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 250
T ++ LC KGHA AE +V + ++I + I L+ GW I + EA R+ EM
Sbjct: 220 TLVVKKLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSR 279
Query: 251 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 310
G +YN L C+C+ KK+P L PE V++EM + N+ ++N+L++ L
Sbjct: 280 GGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLC 339
Query: 311 RARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPD 370
+ RR +E+ + M + GC PD +Y ++ R L+ + R G+G ++++M G + +
Sbjct: 340 KIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLN 399
Query: 371 RKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWE 430
+K YY + ILCG+E ++A+ +F+ MK + YD+L+ K+C L++
Sbjct: 400 KKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYK 459
Query: 431 EAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEK 471
EA G+ + +DP K K T+++D+ + EK
Sbjct: 460 EAAKKGIAVSPKEYRVDPRFMK--KKTKEVDSNVKKRETLPEK 494
BLAST of Carg17950-RA vs. TAIR 10
Match:
AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 124.0 bits (310), Expect = 3.2e-28
Identity = 99/406 (24.38%), Postives = 174/406 (42.86%), Query Frame = 0
Query: 26 LFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQ 85
LF +S+CT +L + A+++KL ++S + + L+ T T +LV
Sbjct: 4 LFSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNS 63
Query: 86 VIDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKK 145
V+ N P + L+FF + + D F+ AI + A+ + + L+ ++
Sbjct: 64 VLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS 123
Query: 146 ARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKR 205
R +TF +VAE + D+A+ LF N+ ++ C D + I+ LC ++
Sbjct: 124 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 183
Query: 206 AEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLR 265
A + + + S + Y +L GW + K T +A +LKEM G P+L +YNT L+
Sbjct: 184 AYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 243
Query: 266 CLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETM 325
RA +++ + M
Sbjct: 244 GFF------------------------------------------RAGQIRHAWEFFLEM 303
Query: 326 KQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESE 385
K+ C D ++Y V ++G + + +EMI EG++P Y +I +LC ++
Sbjct: 304 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 359
Query: 386 KYALELFEKMKRSSLGGYGP---VYDVLIPKLCRGGDFEMGRQLWE 428
+ A+ +FE+M R GY P Y+VLI L G+F G +L +
Sbjct: 364 ENAVVMFEEMVRR---GYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
BLAST of Carg17950-RA vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 117.9 bits (294), Expect = 2.3e-26
Identity = 78/313 (24.92%), Postives = 138/313 (44.09%), Query Frame = 0
Query: 150 DGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 209
D T+ V L K+ EA+ + + C + T +I+ LC + + A +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 210 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQ 269
K C + SL+ G + +N + A + +EM+S G PD F+YN + LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 270 NLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGC 329
G + EALN++ +M A + I+YN L+ +A + +E+ I + M+ G
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508
Query: 330 PPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 389
+ ++Y + L S R +++++MI EG PD+ Y L+ C K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568
Query: 390 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 449
+ + M + Y LI LC+ G E+ +L G+ L + +P I
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628
Query: 450 VFKPTRKIDNQNL 463
+F+ + + NL
Sbjct: 629 LFRKRKTTEAINL 632
BLAST of Carg17950-RA vs. TAIR 10
Match:
AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 115.2 bits (287), Expect = 1.5e-25
Identity = 84/370 (22.70%), Postives = 167/370 (45.14%), Query Frame = 0
Query: 50 VSKLCEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKK 109
+ K+C+ ++ +++ L+K V +T SLV QV+ N + FF W+ +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWANSQ 161
Query: 110 LNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMDRE 169
+ +N + + + +++ + L++++ K + + T V L K +
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221
Query: 170 DEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRS 229
++A+ F ++K Y D + +++ AL + + A V L D I + +
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281
Query: 230 LLYGWSIQKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVM 289
L++G+ + +AR ++ MK PD+ +Y +F+ C++ G ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEML 341
Query: 290 MEMRSYSIAPNSISYNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLS 349
EMR PN ++Y I++ LG++++V E+ + E MK+ GC PD Y + +L +
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401
Query: 350 GRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVY 409
GRF I E+M +G+ D Y +I ++ AL L ++M+ P
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461
Query: 410 DVLIP--KLC 415
+ P K+C
Sbjct: 462 ETYAPLLKMC 461
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023207.1 | 1.2e-274 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022921576.1 | 2.1e-271 | 99.15 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... | [more] |
KAG6589519.1 | 5.1e-270 | 98.73 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022987424.1 | 2.2e-265 | 97.03 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... | [more] |
XP_023516447.1 | 3.0e-262 | 95.97 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9FLJ6 | 4.3e-163 | 63.72 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... | [more] |
Q9FME4 | 4.9e-42 | 27.05 | Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... | [more] |
Q9S7R4 | 4.5e-27 | 24.38 | Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 3.2e-25 | 24.92 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9LUJ4 | 2.1e-24 | 22.70 | Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E1S0 | 9.9e-272 | 99.15 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... | [more] |
A0A6J1JIV3 | 1.1e-265 | 97.03 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... | [more] |
A0A0A0LPF4 | 1.2e-237 | 85.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1 | [more] |
A0A5A7US52 | 3.0e-236 | 85.17 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BV55 | 3.0e-236 | 85.17 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT5G61370.1 | 3.0e-164 | 63.72 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G60960.1 | 3.5e-43 | 27.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74900.1 | 3.2e-28 | 24.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 2.3e-26 | 24.92 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22670.1 | 1.5e-25 | 22.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |