Carg17258-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17258-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box/kelch-repeat protein SKIP11-like
Location	Carg_Chr18: 10881129 .. 10882391 (-)
Sequence length	1263
RNA-Seq Expression	Carg17258-RA
Synteny	Carg17258-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATCGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCAGAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCTTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAATTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAAGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGCTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGAGAGAAGGACATGGTACACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGTGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCGAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAA

mRNA sequence

ATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATCGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCAGAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCTTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAATTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAAGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGCTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGAGAGAAGGACATGGTACACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGTGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCGAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAA

Coding sequence (CDS)

ATGTTGGAGGATCGCTCCTTCCTGGCGTCGAGGGTGTTCTCAAGCTCTTGCCAGCACGAAACTCAGTGGCCTTGCTTTAACTTAACTTATCGCCTCGAGGCCGGAATGGGAAACGGTAAGCGCCCATCAGATCATGATGCTGATGAACTTCAGAGAAACGTCAGGCCTCGATCTTCATGGGATTCTGGCGACAGTTCTGATTCGGGCTCTCTAATCTCTTCCATTGGCAGAGACAACTCTATTAACTGCTTAATTCGCTGCTCCAGGTCGGATTATGGTTCTCTAGCATCTTTGAATCGAAGTTTTCGCTCGTTAATTCGTTCCGGGGAGCTTTACAAACTGAGGCGTTTGAATGATGTGATTGAACATTGGGTTTATTTCTCTTGTCATCTTCTTGAATGGGAAGCTTTCGATCCAATTCAGCGCAGATGGATGCATCTGCCCAGAATGGATTTTAATGAATGCTTCATGTGTTCTGATAAGGAATCCTTAGGAGTGGGGACTGACCTTCTTGTTTTTGGTAAGGATTTGAATTCCCATGTCACATATAGATACAGTATATTGACAAATTCCTGGTGTCCTGGGGTTAGTATGAATGACCCCAGATGCTTGTTTGGGTCTGCTAGCAGAGGAGAGATAGCAATTCTAGCAGGTGGGTGTGATTCAAATGGCAACATACTCAGCTCAGCTGAGCTCTACAACTCCGAGACTAAAACATGGGTGACCCTTCCAAATATGACCAAACCCAGAAAGCTCTGTTCTGGGGTTTTCATGGACAAGAAATTCTACGTCATTGGTGGAGTGGGAGGAAGTGAAGCTAAGGTTCTTACATGCGGGGAAGAGTACGATTTAGACACTGGAAAATGGACTGAAATCCCCAACATGTCGCCTGGGCGGAGTGGTGCAGCTAGGGAGGGTGATATGCCAGCAGCAGCTGAAGCGCCGCCTCTTCTTGCTGTGGTGAATGATGAACTGTATGCTGCAGATCACGCTGAGATGGAGGTTAGGAAGTATGACAAAGAGAGAAGGACATGGTACACTGTTGGGAGGTTGCCTGAACGAGCTGTATCAACGAATGGTTGGGGGCTTGCGTTTAGAGCATGTGGAGATAGGCTGATTGTAATTGGTGGACCGAGGGTGATGGGGGAAGGGTATATAGAGCTGAACTCATGGGTGCCAAGTGAAGGCCCTCCGAGGTGGGATTTGCTTGCGAGGAAGTCATCTGCTAGCTTTGTGTATAACTGTGCTGTGATGGGATGCTAA

Protein sequence

MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC

Homology

[Close]

BLAST of Carg17258-RA vs. NCBI nr
Match: KAG6574096.1 (F-box/kelch-repeat protein SKIP11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013154.1 F-box/kelch-repeat protein SKIP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 879.0 bits (2270), Expect = 1.6e-251
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
           GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG
Sbjct: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. NCBI nr
Match: XP_022945570.1 (F-box/kelch-repeat protein SKIP11-like [Cucurbita moschata] >XP_022945571.1 F-box/kelch-repeat protein SKIP11-like [Cucurbita moschata])

HSP 1 Score: 865.5 bits (2235), Expect = 1.8e-247
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSCQHETQWPCFNLTY LEAGMGNGKRPSDHDADEL RNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEA+VLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
           GA REGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDK RRTW+TVGRLPERAVSTNG
Sbjct: 301 GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. NCBI nr
Match: XP_023541314.1 (F-box/kelch-repeat protein SKIP11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 863.2 bits (2229), Expect = 9.1e-247
Identity = 413/420 (98.33%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSC HETQWPCFNLTYRLEAGMGNGKRPSDHDADEL RNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCPHETQWPCFNLTYRLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DS DSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSSDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
            AAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG
Sbjct: 301 AAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLARK SASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKLSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. NCBI nr
Match: XP_022968356.1 (F-box/kelch-repeat protein SKIP11-like [Cucurbita maxima] >XP_022968357.1 F-box/kelch-repeat protein SKIP11-like [Cucurbita maxima])

HSP 1 Score: 861.7 bits (2225), Expect = 2.7e-246
Identity = 412/420 (98.10%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADEL RNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDP QRRWMHLPRMD NECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPNQRRWMHLPRMDSNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMAKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
           GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDK RRTW+TVGRLPERAVSTNG
Sbjct: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLARK SASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKPSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. NCBI nr
Match: XP_038892224.1 (F-box/kelch-repeat protein SKIP11 [Benincasa hispida] >XP_038892225.1 F-box/kelch-repeat protein SKIP11 [Benincasa hispida] >XP_038892226.1 F-box/kelch-repeat protein SKIP11 [Benincasa hispida] >XP_038892227.1 F-box/kelch-repeat protein SKIP11 [Benincasa hispida])

HSP 1 Score: 809.3 bits (2089), Expect = 1.6e-230
Identity = 392/435 (90.11%), Postives = 403/435 (92.64%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADEL-------QRN 60
           MLEDRSFLASRVFSSSCQ ETQW CFNLTYRLE GMGNGKRPSDHD DE         RN
Sbjct: 1   MLEDRSFLASRVFSSSCQQETQWACFNLTYRLEVGMGNGKRPSDHDGDEFVRTSSSYGRN 60

Query: 61  VRPRSS--------WDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSL 120
           VRPRSS         DSGDSSDSGSLIS IGRDNSINCLIRCSRSDYGS+ASLNRSFRSL
Sbjct: 61  VRPRSSRNHHPNDESDSGDSSDSGSLISPIGRDNSINCLIRCSRSDYGSIASLNRSFRSL 120

Query: 121 IRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLG 180
           IRSGELYKLRRLN VIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLG
Sbjct: 121 IRSGELYKLRRLNGVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLG 180

Query: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGN 240
           VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSAS+GEIAILAGGCDSNGN
Sbjct: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASKGEIAILAGGCDSNGN 240

Query: 241 ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLD 300
           IL++AELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDL+
Sbjct: 241 ILNTAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLE 300

Query: 301 TGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTW 360
           T KWTEIPNMSPGRS AAR+ DMPAAAEAPPLLAVVN+ELYAADH +MEVRKYDK+RR W
Sbjct: 301 TRKWTEIPNMSPGRSAAARDSDMPAAAEAPPLLAVVNNELYAADHTDMEVRKYDKQRREW 360

Query: 361 YTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLAR 420
           +TVGRLPERAVSTNGWGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLAR
Sbjct: 361 FTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 420

[Close]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot
Match: Q8L736 (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana OX=3702 GN=SKIP11 PE=1 SV=2)

HSP 1 Score: 561.2 bits (1445), Expect = 9.7e-159
Identity = 271/390 (69.49%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 33  EAGMGNGKRPSDHDADELQRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDY 92
           +A +G+G   S     E Q +       + GDSSDS SLI+ IGRDNSI+CLIRCSRSDY
Sbjct: 85  DAAIGDGS--SSRQEQEQQSDFND----NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDY 144

Query: 93  GSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDF 152
           GS+ASLNR+FRSL++SGE+Y+LRR N  +EHWVYFSC LLEW AFDP++RRWM LP M  
Sbjct: 145 GSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERRWMQLPTMPS 204

Query: 153 NECFMCSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRG 212
           +  FMC+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS G
Sbjct: 205 SVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLG 264

Query: 213 EIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGS 272
           EIAI AGGCDS G IL  AE+YNSE +TW+TLP M KPRK+CSGVFMD KFYVIGG+GG+
Sbjct: 265 EIAIFAGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGA 324

Query: 273 EAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHA 332
           ++K LTCGEEYDL+T KWT+IP++SP RS  A + DM  AAEAPPL+AVVN++LYAADHA
Sbjct: 325 DSKGLTCGEEYDLETKKWTQIPDLSPPRS-RADQADMSPAAEAPPLVAVVNNQLYAADHA 384

Query: 333 EMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSW 392
           +MEVRKYDKE + W TVGRLPERA S NGWGLAFRACG+RLIVIGGP+  G G+IELNSW
Sbjct: 385 DMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCSGGGFIELNSW 444

Query: 393 VPSE-GPPRWDLLARKSSASFVYNCAVMGC 421
           +PS+ GPP+W LL RK S +FVYNCAVMGC
Sbjct: 445 IPSDGGPPQWTLLDRKHSPTFVYNCAVMGC 467

[Close]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot
Match: Q84M94 (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana OX=3702 GN=At1g26930 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-148
Identity = 262/418 (62.68%), Postives = 307/418 (73.44%), Query Frame = 0


Query: 6   SFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSWDSGDS 65
           S L S +F+     ET+W   +     +    N      H     +         D+G S
Sbjct: 9   SCLVSTLFTMPSHKETKW---SFLVSGKRSFLNNDESDLHFKKMYKLTTDSSEGEDNGSS 68

Query: 66  SDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWV 125
           SDSG+LI  + RD+S++CLIRCSR+DY S+AS+NRS RSLIRSGE+Y+LRRL   +EHWV
Sbjct: 69  SDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWV 128

Query: 126 YFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRY 185
           YFSCHL EWEAFDP  +RWMHLP M  NECF  +DKESL VGTDLLVFG +++S+V YRY
Sbjct: 129 YFSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVSSYVIYRY 188

Query: 186 SILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPN 245
           S+LTNSW    SMN PRCLFGSAS GEIA+LAGGCDS+G IL +AELYN E +TW+ LP 
Sbjct: 189 SLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQTWLVLPG 248

Query: 246 MTKPRKLCSGVFMDKKFYVIGGVG---GSEAKVLTCGEEYDLDTGKWTEIPNMSPGRSGA 305
           M K RK+CSGVFMD KFYVIGG+G    +E KVLTCGEE+DL T KWTEIP MSP RS  
Sbjct: 249 MNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEMSPPRSN- 308

Query: 306 AREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNGWG 365
            +   M AAA APPL+AVVND+LYAADHA M VR+YDKE+R W  VG LPE+A S NGWG
Sbjct: 309 -QGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAGSMNGWG 368

Query: 366 LAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 421
           LAFRACGDR+IVIGGP+  GEG+IELNSWVPS   P W LL +K S +FVYNCAVM C
Sbjct: 369 LAFRACGDRIIVIGGPKAPGEGFIELNSWVPSVTTPEWHLLGKKQSVNFVYNCAVMSC 421

[Close]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot
Match: Q9CA63 (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana OX=3702 GN=At1g74510 PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 8.9e-136
Identity = 245/451 (54.32%), Postives = 307/451 (68.07%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQW----PC---FNLTYRL------EAGMGNGKRPSDH-- 60
           MLE  S+L SR   SSC+ E++W     C    +L  RL      E          DH  
Sbjct: 1   MLEAPSYLVSRDLPSSCEEESKWIYNAHCVLQLSLRKRLLDDTDVEGSSAKKMLRVDHGS 60

Query: 61  --DADELQRNVRPRSSWDSGDSSDSG-------SLISSIGRDNSINCLIRCSRSDYGSLA 120
             ++D++  +++   ++ S + S  G       S ++ + ++  +NCL  CS SD+GS+A
Sbjct: 61  RGESDKITDSLQLAKTYQSSNQSQQGGGGDQQSSPVTRLDQNALLNCLAHCSLSDFGSIA 120

Query: 121 SLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECF 180
           S NR+FRSLI+  ELY+LRR   ++EHW+YFSC LLEWEA+DP   RW+ +P+M FNECF
Sbjct: 121 STNRTFRSLIKDSELYRLRRAKGIVEHWIYFSCRLLEWEAYDPNGDRWLRVPKMTFNECF 180

Query: 181 MCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAIL 240
           MCSDKESL VGT+LLVFGK++ SHV YRYSILTN+W  G+ MN PRCLFGSAS GEIA++
Sbjct: 181 MCSDKESLAVGTELLVFGKEIMSHVIYRYSILTNTWTSGMQMNVPRCLFGSASLGEIAVI 240

Query: 241 AGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVL 300
           AGGCD  G ILSSAELYNSET  W  +P+M K RK+CS VFMD  FY IGG+G   +K+L
Sbjct: 241 AGGCDPRGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIGEGNSKML 300

Query: 301 TCGEEYDLDTGKWTEIPNMSPGRSG------AAREGDMPAAAEAPPLLAVVNDELYAADH 360
            CGE YDL    WT IPNM P RS       A       AA+EAPPL+AVV DELYAA++
Sbjct: 301 LCGEVYDLKKKTWTLIPNMLPERSSGGGGDQAKEIAAATAASEAPPLVAVVKDELYAANY 360

Query: 361 AEMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNS 420
           A+ EV+KYDK    W  VG LPERA S NGWG+AFRACGD+L+V+GGPR +G G+IE+N+
Sbjct: 361 AQQEVKKYDKRLNVWNKVGNLPERASSMNGWGMAFRACGDQLVVVGGPRAIGGGFIEINA 420

[Close]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.7e-86
Identity = 168/359 (46.80%), Postives = 226/359 (62.95%), Query Frame = 0


Query: 68  SGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYF 127
           S S++  +  D ++NCL    RSDY SL+ +N+ +  LI SG L+ LR+   ++E+ V+ 
Sbjct: 46  SDSVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFM 105

Query: 128 SCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSI 187
            C    W  F P++++WM LP+M  +ECF  +DKESL V  +LLVFG++L     ++YS+
Sbjct: 106 VCDPRGWLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYSL 165

Query: 188 LTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMT 247
            +  W     M+ PRCLF S S G IAI+AGG D NGNIL+SAELY+S +  W  LPNM 
Sbjct: 166 RSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSGRWEMLPNMH 225

Query: 248 KPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGD 307
            PR+LCSG FMD KFYVIGG+      V T GEE+DL+T KW +I  M P         +
Sbjct: 226 SPRRLCSGFFMDGKFYVIGGMSSPNVSV-TFGEEFDLETRKWRKIEGMYP---------N 285

Query: 308 MPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRA 367
           +  AA+APPL+ VVN+EL+  +++   V+KYDK +  W  +GRLP    S+NGWGLAF+ 
Sbjct: 286 VNRAAQAPPLVVVVNNELFTLEYSTNMVKKYDKVKNKWEVMGRLPPMVDSSNGWGLAFKP 345

Query: 368 CGDRLIVIGGPR-VMGEGYIELNSWVPSEGPP----RWDLLARKSSAS-FVYNCAVMGC 421
           CGD+L+V  G R   GEG I +NSW P  G       W +L  K +   FVYNCAVMGC
Sbjct: 346 CGDQLLVFCGQRGPHGEG-IVVNSWCPKSGAKDGNLDWKVLGVKENVGVFVYNCAVMGC 393

[Close]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot
Match: Q9LI89 (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g27150 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.4e-55
Identity = 139/397 (35.01%), Postives = 198/397 (49.87%), Query Frame = 0


Query: 53  NVRPRSSWDSGDSSDSGSLISS-----------------IGRDNSINCLIRCSRSDYGSL 112
           NV P   WD  ++ ++   +SS                 +  +  +  L R  R +Y  L
Sbjct: 35  NVEPSLDWDGEETGEATKALSSTCLKPKDADYCLLNVPQLVYELEVEILARVPRFEYWKL 94

Query: 113 ASLNRSFRSLIRSGELYKLRRLNDVIEHWVY-FSCHLLEWEAFDPIQRRWMHLPRMDFNE 172
             LN+ F  L++S E++K+RR   V+E  V+  S     W  FD        LP +  + 
Sbjct: 95  KLLNKGFSRLLKSDEIFKVRRERGVVEPSVFMLSSGDTCWTMFDKGFGNCQKLPELPSDI 154

Query: 173 CFMCSDKESLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIA 232
           CF+  DKESL  GT L+V GK+  S   +RY + T+ W  G +M  PR LF SA+ G + 
Sbjct: 155 CFLHGDKESLCAGTHLIVTGKEEKSIALWRYELETSKWFKGPAMITPRILFASATCGTVV 214

Query: 233 ILAGGCDSNGN----ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGG 292
            +AGG    GN    ++ S E Y+S+TKTW  L  M K RK CSG ++  KFYV+GG   
Sbjct: 215 FVAGGLKIEGNGTMEVVDSVEKYDSKTKTWTLLRGMHKRRKFCSGCYLRGKFYVLGG-RD 274

Query: 293 SEAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADH 352
              + LTCGE YD  T  W  IP++    S         ++ ++PPL+AVV D+LY+ + 
Sbjct: 275 ENGQNLTCGESYDEKTNTWELIPDILKDMSF--------SSVQSPPLIAVVGDDLYSLET 334

Query: 353 AEMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNS 412
           +  E+R YD    +W  +G +P RA S  GWG+AF++ GD+L+VIG     G    E  S
Sbjct: 335 SANELRVYDANANSWKKLGDVPVRAKSNGGWGVAFKSLGDKLLVIGAS--AGPSRAETMS 394

Query: 413 WV---PSEGPPR---WDLLARKSSA---SFVYNCAVM 419
                PS  P     W+   R        F+ NC VM
Sbjct: 395 VYTSRPSANPANKLYWEESKRCCGVRFNHFILNCCVM 420

[Close]

BLAST of Carg17258-RA vs. ExPASy TrEMBL
Match: A0A6J1G1B1 (F-box/kelch-repeat protein SKIP11-like OS=Cucurbita moschata OX=3662 GN=LOC111449766 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 8.9e-248
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSCQHETQWPCFNLTY LEAGMGNGKRPSDHDADEL RNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYCLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEA+VLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEARVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
           GA REGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDK RRTW+TVGRLPERAVSTNG
Sbjct: 301 GAGREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. ExPASy TrEMBL
Match: A0A6J1HTC3 (F-box/kelch-repeat protein SKIP11-like OS=Cucurbita maxima OX=3661 GN=LOC111467619 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.3e-246
Identity = 412/420 (98.10%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSW 60
           MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADEL RNVRPRSSW
Sbjct: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELHRNVRPRSSW 60

Query: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120
           DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV
Sbjct: 61  DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDV 120

Query: 121 IEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSH 180
           IEHWVYFSCHLLEWEAFDP QRRWMHLPRMD NECFMCSDKESLGVGTDLLVFGKDLNSH
Sbjct: 121 IEHWVYFSCHLLEWEAFDPNQRRWMHLPRMDSNECFMCSDKESLGVGTDLLVFGKDLNSH 180

Query: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240
           VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW
Sbjct: 181 VTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTW 240

Query: 241 VTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300
           VTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS
Sbjct: 241 VTLPNMAKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLDTGKWTEIPNMSPGRS 300

Query: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNG 360
           GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDK RRTW+TVGRLPERAVSTNG
Sbjct: 301 GAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKVRRTWFTVGRLPERAVSTNG 360

Query: 361 WGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 420
           WGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLARK SASFVYNCAVMGC
Sbjct: 361 WGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLARKPSASFVYNCAVMGC 420

[Close]

BLAST of Carg17258-RA vs. ExPASy TrEMBL
Match: A0A5D3D261 (F-box/kelch-repeat protein SKIP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00590 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.5e-226
Identity = 384/435 (88.28%), Postives = 398/435 (91.49%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADEL-------QRN 60
           MLEDRSFLASRVFSSSC  E QWPCFNLTYRLE GM NGKRPSDHD ++         RN
Sbjct: 1   MLEDRSFLASRVFSSSCHQENQWPCFNLTYRLEVGMANGKRPSDHDGEDFVKTSSSYGRN 60

Query: 61  VRPRSS--------WDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSL 120
           VRPRSS         DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGS+ASLNRSFR L
Sbjct: 61  VRPRSSRDHHPNDESDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSIASLNRSFRKL 120

Query: 121 IRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLG 180
           IR+GELYKLRRLN VIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLG
Sbjct: 121 IRNGELYKLRRLNGVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLG 180

Query: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGN 240
           VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSAS+GEIAILAGGCDSNGN
Sbjct: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASKGEIAILAGGCDSNGN 240

Query: 241 ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLD 300
           IL++AELYNSETKTWVTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEA VLTCGEEYDL+
Sbjct: 241 ILNTAELYNSETKTWVTLPNMIKPRKLCSGVFMDKKFYVIGGVGGSEANVLTCGEEYDLE 300

Query: 301 TGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTW 360
           T KWTEIPNMSPGRS AAR+ +MPAAAEAPPLLAVVN+ELYAADH +MEVRKYDK+RR W
Sbjct: 301 TRKWTEIPNMSPGRSAAARDTEMPAAAEAPPLLAVVNNELYAADHTDMEVRKYDKQRREW 360

Query: 361 YTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLAR 420
            TVGRLPERAVSTNGWGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLAR
Sbjct: 361 NTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 420

[Close]

BLAST of Carg17258-RA vs. ExPASy TrEMBL
Match: A0A0A0KVW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604950 PE=4 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 7.3e-226
Identity = 383/435 (88.05%), Postives = 398/435 (91.49%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADEL-------QRN 60
           MLEDRSFLASRVFSSSC  E QW CFNLTYRLE GMGNGKRPSDHD ++         RN
Sbjct: 1   MLEDRSFLASRVFSSSCHQENQWACFNLTYRLEVGMGNGKRPSDHDGEDFVKTSSSYGRN 60

Query: 61  VRPRSSW--------DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSL 120
           VRPRSS         DSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGS+ASLNRSFR L
Sbjct: 61  VRPRSSTDHHPNDESDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSIASLNRSFRKL 120

Query: 121 IRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLG 180
           IR+GELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKESLG
Sbjct: 121 IRNGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKESLG 180

Query: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGN 240
           VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSAS+GEIAILAGGCDSNGN
Sbjct: 181 VGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASKGEIAILAGGCDSNGN 240

Query: 241 ILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEYDLD 300
           IL++AELYNSETKTWVTLPNM KPRKLCSGVFMDKKFYVIGGVGGSEA VLTCGEEYDL+
Sbjct: 241 ILNTAELYNSETKTWVTLPNMIKPRKLCSGVFMDKKFYVIGGVGGSEANVLTCGEEYDLE 300

Query: 301 TGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTW 360
           T KWTEIPNMSPGRS AAR+ +M AAAEAPPLLAVVN+ELYAADH +MEVRKYDK+RR W
Sbjct: 301 TRKWTEIPNMSPGRSAAARDPEMRAAAEAPPLLAVVNNELYAADHTDMEVRKYDKQRREW 360

Query: 361 YTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLAR 420
            T+GRLPERAVSTNGWGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDLLAR
Sbjct: 361 NTIGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDLLAR 420

[Close]

BLAST of Carg17258-RA vs. ExPASy TrEMBL
Match: A0A6J1DE00 (F-box/kelch-repeat protein SKIP11 OS=Momordica charantia OX=3673 GN=LOC111019206 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 386/438 (88.13%), Postives = 401/438 (91.55%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRP--SDHDADEL-------Q 60
           MLEDRSF+ASRVFSSSCQ ETQW  FN TYRLE GMGNGKRP  SDH AD+L        
Sbjct: 1   MLEDRSFVASRVFSSSCQQETQWAYFNFTYRLEVGMGNGKRPSESDHHADDLPKTSSSCS 60

Query: 61  RNVRPRSS---------WDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSF 120
           RNVRPRSS          DSGD+SDSGSLISSIGRDNSINCLIRCSRSDYGS+ASL+R+F
Sbjct: 61  RNVRPRSSRDHPNHPSDSDSGDASDSGSLISSIGRDNSINCLIRCSRSDYGSIASLSRTF 120

Query: 121 RSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKE 180
           RSLIRSGELYKLRRLN VIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMD NECFMCSDKE
Sbjct: 121 RSLIRSGELYKLRRLNGVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDSNECFMCSDKE 180

Query: 181 SLGVGTDLLVFGKDLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDS 240
           SLGVGTDLLVFGKDLNSHVTYRYSILTNSW PGVSMNDPRCLFGSAS+GEIAILAGGCDS
Sbjct: 181 SLGVGTDLLVFGKDLNSHVTYRYSILTNSWSPGVSMNDPRCLFGSASQGEIAILAGGCDS 240

Query: 241 NGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVLTCGEEY 300
           NGNIL+SAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSE+KVLTCGEEY
Sbjct: 241 NGNILNSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSESKVLTCGEEY 300

Query: 301 DLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKER 360
           DL+T KWTEIPNMSPGR+ AAR+GDMPAAAEAPPLLAVVN+ELYAADH +MEVRKYDK R
Sbjct: 301 DLETRKWTEIPNMSPGRNAAARDGDMPAAAEAPPLLAVVNNELYAADHTDMEVRKYDKRR 360

Query: 361 RTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDL 420
           R W TVGRLPERAVSTNGWGLAFRACGDRLIVIGGPR MGEGYIELNSWVPSEGPPRWDL
Sbjct: 361 REWSTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRAMGEGYIELNSWVPSEGPPRWDL 420

[Close]

BLAST of Carg17258-RA vs. TAIR 10
Match: AT1G14330.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 578.2 bits (1489), Expect = 5.5e-165
Identity = 287/446 (64.35%), Postives = 340/446 (76.23%), Query Frame = 0


Query: 1   MLEDRSFLASRVFSSSCQHETQWPCF--NLTYRLEAGMGNGKRPSDHDADELQRNVRPR- 60
           M+EDR++L SR+FSSS   E++WP          E+ + NGKR  ++D DEL+++  PR 
Sbjct: 1   MVEDRTYLMSRIFSSSRLSESKWPYMYPQPEDSSESNLINGKRALENDVDELRQSKSPRL 60

Query: 61  --------------------SSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDYGSLAS 120
                               S  ++  +SD  SLI+ IGRDNSI+CLIRCSRS YGS+AS
Sbjct: 61  MGFSIHGNEAIEEDEQEQDQSDSNNNGNSDGDSLINDIGRDNSISCLIRCSRSGYGSIAS 120

Query: 121 LNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDFNECFM 180
           LNRSFRSL+++GE+Y+LRR N ++EHWVYFSC LLEW AF+P +RRWM+LP M     FM
Sbjct: 121 LNRSFRSLVKTGEIYRLRRQNQIVEHWVYFSCQLLEWVAFNPFERRWMNLPTMPSGVTFM 180

Query: 181 CSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRGEIAIL 240
           C+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS GEIAI 
Sbjct: 181 CADKESLAVGTDLLVLGKDDYSSHVIYRYSLLTNSWSSGMRMNSPRCLFGSASLGEIAIF 240

Query: 241 AGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGSEAKVL 300
           AGG DS G I  SAE+YNSE +TW TLP M KPRK+CSGVFMD KFYVIGG+GG+++KVL
Sbjct: 241 AGGFDSFGKISDSAEMYNSELQTWTTLPKMNKPRKMCSGVFMDGKFYVIGGIGGNDSKVL 300

Query: 301 TCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHAEMEVR 360
           TCGEE+DL+T KWTEIP MSP RS      +MPAAAEAPPL+AVVN+ELYAADHA+MEVR
Sbjct: 301 TCGEEFDLETKKWTEIPEMSPPRS-----REMPAAAEAPPLVAVVNNELYAADHADMEVR 360

Query: 361 KYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSWVPS-- 420
           KYDKE + W+T+GRLPERA S NGWGLAFRACG+RLIVIGGPR  G GYIELNSW+PS  
Sbjct: 361 KYDKESKKWFTLGRLPERADSVNGWGLAFRACGERLIVIGGPRSSGGGYIELNSWIPSSD 420

[Close]

BLAST of Carg17258-RA vs. TAIR 10
Match: AT2G02870.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 6.9e-160
Identity = 271/390 (69.49%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 33  EAGMGNGKRPSDHDADELQRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDY 92
           +A +G+G   S     E Q +       + GDSSDS SLI+ IGRDNSI+CLIRCSRSDY
Sbjct: 85  DAAIGDGS--SSRQEQEQQSDFND----NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDY 144

Query: 93  GSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDF 152
           GS+ASLNR+FRSL++SGE+Y+LRR N  +EHWVYFSC LLEW AFDP++RRWM LP M  
Sbjct: 145 GSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERRWMQLPTMPS 204

Query: 153 NECFMCSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRG 212
           +  FMC+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS G
Sbjct: 205 SVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLG 264

Query: 213 EIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGS 272
           EIAI AGGCDS G IL  AE+YNSE +TW+TLP M KPRK+CSGVFMD KFYVIGG+GG+
Sbjct: 265 EIAIFAGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGA 324

Query: 273 EAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHA 332
           ++K LTCGEEYDL+T KWT+IP++SP RS  A + DM  AAEAPPL+AVVN++LYAADHA
Sbjct: 325 DSKGLTCGEEYDLETKKWTQIPDLSPPRS-RADQADMSPAAEAPPLVAVVNNQLYAADHA 384

Query: 333 EMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSW 392
           +MEVRKYDKE + W TVGRLPERA S NGWGLAFRACG+RLIVIGGP+  G G+IELNSW
Sbjct: 385 DMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCSGGGFIELNSW 444

Query: 393 VPSE-GPPRWDLLARKSSASFVYNCAVMGC 421
           +PS+ GPP+W LL RK S +FVYNCAVMGC
Sbjct: 445 IPSDGGPPQWTLLDRKHSPTFVYNCAVMGC 467

[Close]

BLAST of Carg17258-RA vs. TAIR 10
Match: AT2G02870.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 6.9e-160
Identity = 271/390 (69.49%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 33  EAGMGNGKRPSDHDADELQRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDY 92
           +A +G+G   S     E Q +       + GDSSDS SLI+ IGRDNSI+CLIRCSRSDY
Sbjct: 85  DAAIGDGS--SSRQEQEQQSDFND----NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDY 144

Query: 93  GSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDF 152
           GS+ASLNR+FRSL++SGE+Y+LRR N  +EHWVYFSC LLEW AFDP++RRWM LP M  
Sbjct: 145 GSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERRWMQLPTMPS 204

Query: 153 NECFMCSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRG 212
           +  FMC+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS G
Sbjct: 205 SVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLG 264

Query: 213 EIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGS 272
           EIAI AGGCDS G IL  AE+YNSE +TW+TLP M KPRK+CSGVFMD KFYVIGG+GG+
Sbjct: 265 EIAIFAGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGA 324

Query: 273 EAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHA 332
           ++K LTCGEEYDL+T KWT+IP++SP RS  A + DM  AAEAPPL+AVVN++LYAADHA
Sbjct: 325 DSKGLTCGEEYDLETKKWTQIPDLSPPRS-RADQADMSPAAEAPPLVAVVNNQLYAADHA 384

Query: 333 EMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSW 392
           +MEVRKYDKE + W TVGRLPERA S NGWGLAFRACG+RLIVIGGP+  G G+IELNSW
Sbjct: 385 DMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCSGGGFIELNSW 444

Query: 393 VPSE-GPPRWDLLARKSSASFVYNCAVMGC 421
           +PS+ GPP+W LL RK S +FVYNCAVMGC
Sbjct: 445 IPSDGGPPQWTLLDRKHSPTFVYNCAVMGC 467

[Close]

BLAST of Carg17258-RA vs. TAIR 10
Match: AT2G02870.3 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 561.2 bits (1445), Expect = 6.9e-160
Identity = 271/390 (69.49%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 33  EAGMGNGKRPSDHDADELQRNVRPRSSWDSGDSSDSGSLISSIGRDNSINCLIRCSRSDY 92
           +A +G+G   S     E Q +       + GDSSDS SLI+ IGRDNSI+CLIRCSRSDY
Sbjct: 85  DAAIGDGS--SSRQEQEQQSDFND----NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDY 144

Query: 93  GSLASLNRSFRSLIRSGELYKLRRLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRMDF 152
           GS+ASLNR+FRSL++SGE+Y+LRR N  +EHWVYFSC LLEW AFDP++RRWM LP M  
Sbjct: 145 GSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERRWMQLPTMPS 204

Query: 153 NECFMCSDKESLGVGTDLLVFGK-DLNSHVTYRYSILTNSWCPGVSMNDPRCLFGSASRG 212
           +  FMC+DKESL VGTDLLV GK D +SHV YRYS+LTNSW  G+ MN PRCLFGSAS G
Sbjct: 205 SVTFMCADKESLAVGTDLLVLGKDDFSSHVIYRYSLLTNSWSSGMKMNSPRCLFGSASLG 264

Query: 213 EIAILAGGCDSNGNILSSAELYNSETKTWVTLPNMTKPRKLCSGVFMDKKFYVIGGVGGS 272
           EIAI AGGCDS G IL  AE+YNSE +TW+TLP M KPRK+CSGVFMD KFYVIGG+GG+
Sbjct: 265 EIAIFAGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGA 324

Query: 273 EAKVLTCGEEYDLDTGKWTEIPNMSPGRSGAAREGDMPAAAEAPPLLAVVNDELYAADHA 332
           ++K LTCGEEYDL+T KWT+IP++SP RS  A + DM  AAEAPPL+AVVN++LYAADHA
Sbjct: 325 DSKGLTCGEEYDLETKKWTQIPDLSPPRS-RADQADMSPAAEAPPLVAVVNNQLYAADHA 384

Query: 333 EMEVRKYDKERRTWYTVGRLPERAVSTNGWGLAFRACGDRLIVIGGPRVMGEGYIELNSW 392
           +MEVRKYDKE + W TVGRLPERA S NGWGLAFRACG+RLIVIGGP+  G G+IELNSW
Sbjct: 385 DMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERLIVIGGPKCSGGGFIELNSW 444

Query: 393 VPSE-GPPRWDLLARKSSASFVYNCAVMGC 421
           +PS+ GPP+W LL RK S +FVYNCAVMGC
Sbjct: 445 IPSDGGPPQWTLLDRKHSPTFVYNCAVMGC 467

[Close]

BLAST of Carg17258-RA vs. TAIR 10
Match: AT1G26930.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-149
Identity = 262/418 (62.68%), Postives = 307/418 (73.44%), Query Frame = 0


Query: 6   SFLASRVFSSSCQHETQWPCFNLTYRLEAGMGNGKRPSDHDADELQRNVRPRSSWDSGDS 65
           S L S +F+     ET+W   +     +    N      H     +         D+G S
Sbjct: 9   SCLVSTLFTMPSHKETKW---SFLVSGKRSFLNNDESDLHFKKMYKLTTDSSEGEDNGSS 68

Query: 66  SDSGSLISSIGRDNSINCLIRCSRSDYGSLASLNRSFRSLIRSGELYKLRRLNDVIEHWV 125
           SDSG+LI  + RD+S++CLIRCSR+DY S+AS+NRS RSLIRSGE+Y+LRRL   +EHWV
Sbjct: 69  SDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWV 128

Query: 126 YFSCHLLEWEAFDPIQRRWMHLPRMDFNECFMCSDKESLGVGTDLLVFGKDLNSHVTYRY 185
           YFSCHL EWEAFDP  +RWMHLP M  NECF  +DKESL VGTDLLVFG +++S+V YRY
Sbjct: 129 YFSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFGWEVSSYVIYRY 188

Query: 186 SILTNSWCPGVSMNDPRCLFGSASRGEIAILAGGCDSNGNILSSAELYNSETKTWVTLPN 245
           S+LTNSW    SMN PRCLFGSAS GEIA+LAGGCDS+G IL +AELYN E +TW+ LP 
Sbjct: 189 SLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQTWLVLPG 248

Query: 246 MTKPRKLCSGVFMDKKFYVIGGVG---GSEAKVLTCGEEYDLDTGKWTEIPNMSPGRSGA 305
           M K RK+CSGVFMD KFYVIGG+G    +E KVLTCGEE+DL T KWTEIP MSP RS  
Sbjct: 249 MNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPEMSPPRSN- 308

Query: 306 AREGDMPAAAEAPPLLAVVNDELYAADHAEMEVRKYDKERRTWYTVGRLPERAVSTNGWG 365
            +   M AAA APPL+AVVND+LYAADHA M VR+YDKE+R W  VG LPE+A S NGWG
Sbjct: 309 -QGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAGSMNGWG 368

Query: 366 LAFRACGDRLIVIGGPRVMGEGYIELNSWVPSEGPPRWDLLARKSSASFVYNCAVMGC 421
           LAFRACGDR+IVIGGP+  GEG+IELNSWVPS   P W LL +K S +FVYNCAVM C
Sbjct: 369 LAFRACGDRIIVIGGPKAPGEGFIELNSWVPSVTTPEWHLLGKKQSVNFVYNCAVMSC 421

The following BLAST results are available for this feature:

BLAST of Carg17258-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574096.1	1.6e-251	100.00	F-box/kelch-repeat protein SKIP11, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945570.1	1.8e-247	98.33	F-box/kelch-repeat protein SKIP11-like [Cucurbita moschata] >XP_022945571.1 F-bo...	[more]
XP_023541314.1	9.1e-247	98.33	F-box/kelch-repeat protein SKIP11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968356.1	2.7e-246	98.10	F-box/kelch-repeat protein SKIP11-like [Cucurbita maxima] >XP_022968357.1 F-box/...	[more]
XP_038892224.1	1.6e-230	90.11	F-box/kelch-repeat protein SKIP11 [Benincasa hispida] >XP_038892225.1 F-box/kelc...	[more]

BLAST of Carg17258-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L736	9.7e-159	69.49	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana OX=3702 GN=SKIP11 PE=1...	[more]
Q84M94	1.6e-148	62.68	F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana OX=3702 GN=At1g2693...	[more]
Q9CA63	8.9e-136	54.32	F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana OX=3702 GN=At1g7451...	[more]
Q9FKJ0	1.7e-86	46.80	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]
Q9LI89	3.4e-55	35.01	F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana OX=3702 GN=At3g2715...	[more]

BLAST of Carg17258-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1B1	8.9e-248	98.33	F-box/kelch-repeat protein SKIP11-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HTC3	1.3e-246	98.10	F-box/kelch-repeat protein SKIP11-like OS=Cucurbita maxima OX=3661 GN=LOC1114676...	[more]
A0A5D3D261	2.5e-226	88.28	F-box/kelch-repeat protein SKIP11-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KVW7	7.3e-226	88.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604950 PE=4 SV=1	[more]
A0A6J1DE00	1.1e-224	88.13	F-box/kelch-repeat protein SKIP11 OS=Momordica charantia OX=3673 GN=LOC111019206...	[more]

BLAST of Carg17258-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14330.1	5.5e-165	64.35	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.1	6.9e-160	69.49	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.2	6.9e-160	69.49	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G02870.3	6.9e-160	69.49	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G26930.1	1.1e-149	62.68	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 213..260 e-value: 2.8E-7 score: 40.2 coord: 261..305 e-value: 0.12 score: 19.9 coord: 169..212 e-value: 12.0 score: 2.3
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 201..246 e-value: 1.9E-9 score: 37.0 coord: 249..296 e-value: 5.6E-10 score: 38.7
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 118..399 e-value: 2.6E-40 score: 140.2
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 131..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..55
None	No IPR available	PANTHER	PTHR46122	GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED	coord: 59..420
None	No IPR available	PANTHER	PTHR46122:SF2	F-BOX/KELCH-REPEAT PROTEIN SKIP11	coord: 59..420

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg17258	Carg17258	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17258-RA:1	Carg17258-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17258-RA:cds	Carg17258-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg17258-RA	Carg17258-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding