Carg16364-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16364-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein TIC 21, chloroplastic
Location	Carg_Chr19: 6154639 .. 6160212 (-)
Sequence length	1389
RNA-Seq Expression	Carg16364-RA
Synteny	Carg16364-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCAATTCGCCTTCTGTAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCGAAGGTTTATTCGATCATCAATAATGCAGTCGCTACTCTCGCCGGTCGGTCGCGGCGGTCCCTTCCCGTCCGCCGCAGTTTATACATCGGAGTTACACCTCAGCTGTTTCAATCGTCGACCTTTCTCTGTCCGATACGCATCCAATTTCAAATCTCCTCATAATTCCCTCCCTTCATTTAGTGCAATTCGACCTCCTTCTTCTTTTTCGTTGTTGCTTTTCAAGAATTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGATACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTCCCCCAAACGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTTTTCTTTCTTCCAAGTCTTTTTGTTCTTTTCTACTAACGTTTTTGATATGGCCAAGAAATGTAGTATTGAAACTTAGGCTGACCTTGCTTTAATTTCTTGAGTGAAACCCCAAAAGGATTTTAGATGAATCGTCTTGTTTACTAGTTTCTTGAAGTTCTGCTTTATCTAATTTGATTGACTTTGGACGTTTTCTTACATTCCTACGAAGATTTTCGCTTTGTAACTTTTTATCTCCTTCCCGATAAACCAGAATAACGAAACAGATAAATCATATTTAAGCTAGGGTAGATTAGATATTGAGCACAAGCAATTCCGCATAAAAATTAAGCAACTAGAGCTAGTGGAGATTCCTAAAAGAATGCATACAGAACCTTTGATACCGAAAATGAAGGGGGAGTTACAAGGGGAGCCTGTTATTCTCCTAATAGATTGTGATGCAATGCACAACTTCATTGCAGGTAAGGTGGTGGATGAGCTTCATTTAATCCAATCTGGAACAGATGAGTATGGGACTCCACTGGGTTTAGATTATGCAATTAAGGGAAAAGAGTTTGCCTGAGAGTTCCACTCCTCCAAATTTGGAGGAAATCGAGGATTATCTTCTTTTTGAGGTAGGTAAGTCTAATATTATAGTTGCAACCGTGGTTAAGCATTCGTGGAAGCCTGCAAATGAACTAAACGACTCAAGATGAGGTTATGAAGGGGAACAAAGATGGTTGTTCTAGAAGGGGTTCCTTTCCTAAGCCATTCCCTAGTTTCACTAAAAGCTATGGTTAAGGATTTCGTAACGGGGTTGGGATTGTTACTAGAATGATGATGATCGTATCTCAAGGGAAGAACCAATCCCATCCTAGCTAAGTTACAAGTGCTTAATGAGTCTGAAAAGTCGTTCGCCATGACTCTGAGTTTACCCACTATCAACAGGTATGATCGTGTAGTAATCTTAATGACACCTCCTCCAAGTCTAGAAGAACAAGATTGAGTGGTGGTGGGGAAATTCTAGCTGGCAACATAATTGAGCCGAACGACACTCTCTATTCTAGTCCTCTATTTTTGGTAAAAATGAAGAGATGTCTGCAACTTACTGTAGACTTTAAAGCACTGAACCTTGAGGTTGTCCTTAATAACTCTCATTCACTCGTAGTGGTTTTTAACCTAACCCTTTTGATATGTTTAAGTAATGAGATTACTTCTCGTCCTTTCAATCATTTAGGTTTTCCTTTAGTAATAACTTTGTGTCTCCTTTTGGAATCCAGCGATTGAAAAGATTCAAAAGTGTCTTGCTTCTTTTAAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTGAAAAGGTGAGAGAGGTACTCTCATTTAGTTGGTTCTGAGTGGGATCCCAATTTATTTCGTGTCCCGTTTTAAGATCTTCCCTTGGGTGGGTTCTAGGATCAAGAAGATATTAAGAGATTTCTTGTGGGAAGGGATCCAAGAAGGGTGGAGACTTTCATCTTGTTGGATGGGAGATTATGTCCAAGCCAATTTCTTTAGGAGGATTAGGGATAGGAAATCTGAATCTTTGGGAAAAGGCCTTGCTTAAAAGGCTTTGGCGCTTCCCTTTGGAAGTCCACGCTTTATGGGATAGGATCATTGTGACCATGCATTGGCTTCTACCTTCTAATTGGGTCTCTAATCCTAGGATCAAAGGAACTTTTGGGAATACGTGGAGATCGATTACTATGGGATACACAAAATTCTCAAGCTTTCATTGTCGGGGATAGATTGTCAATTTTCTTCTGGGAGGATTTCTGGCTGTGGGATAGTCCCCATTGCTGCTGCTTTCTTTATCATCATTGCTTGCAAGTTTTCATCTTCTGTAAAGGAAGCCTCTTCTTAACTTTTATATGGTAGTGTGATAAGAGTGGAAAGGCGCCAGTGCATTTAACGTATTTAGGGCGAATTAGCGTTAGTCTAAGTAGGGAAGGTGGAGTGACTTTGTCCAGGAGAAGAGATTACTTGAGCAGAGAGCAGGTGAGAAAGTGATGGAACTGTGAGTATGCAAATGTGTAAACGTGAGCTCCAAAGGAGGTTCTGAATTGGGCCTTATCTCCCTCAGTTTACTACTGCCTTTCATTGAAGCACAAGGAAGCGCTAGACCACTTTTTCCTCCATTGTTCTTATACCTTTAACGGTTGGATGTGTTGGATCAGGGAGTTTCAGTTATCATTTTGTTTACTTAATAACCGCATAGAGGATTGGTTGTTTAGTTTGGATGTTTGACAGGTAGCTCTCTCAAAAACAAAGCAAGGATTTTGGGGAACTGTGCTATTAGAGCCTTTGTCTGGATCTTATGGAAAGAAAGAAACCAGAGATCGTTTGAAAACAAGGGTGTTAGAGAGTTTTTTATTTTTATTATTCTTTAGGAATGTACAGTGTACGGCTTCATGGTGGTGTTCAAATCACAACAAATCCTTTTGTAATTATAGCCCCACTTTAATTATGGCTTGATTGGAAGGCTTTTCTTTAGTGCCTTTGGGAGGTAGACAAGCGGGGAGTACATTTATGGAAAAAGTATAAACAGTAAGAGGGGACACAAATAACAAGCATCACTGAGAATATCATTGAATTTTGGATTCGATTCCGTTGTCTTATATGTATATATTATGAAATGGGAAGCCATGGTGGGATAATATGAAGCTTGAATTATGTCCAAAACTGTCTCACTGCATAACCTCTTTAATTCCAAAATTGGACAGGTTGTTTAGGTCTTTCAAATGCTTCTTTATTACGATTTCTCGTGATTTTTCTTGAGAGGTTCCTAGACTGCATGACTATCATTATTGCTATCAATACTGAACTAAGTTGCTTTGATGGTTTAGGTGGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAGGAGGTTGGGTAATCTCGGATTTTGGGGACAGTTGGTGTGCACGATTGTCGCTGCTGTTATTCTTTCATTCTCTGTTGTCGTCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCCTTCGGGTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGTATTATAATTTCTGAGTCTCCGCGTGTTTTCTGATTGCTCGAGATTACTGGAACGTCAAAAAACAATTTATTTGTTCTTCCAGCCTTCTAAACCACAGAACCAAGTCGGCCAATTTAATCTAACAATAAATAGGATTTCTTTGCTATAAAAAATAGATTTGTTATGAGATTTATCTATTTGAAAATGAAAAAGATAACCTGTACACCACCTCTTGGAATACAATAGGTTATATATCCCAGCTTTTGGCATTCTTCCTTCTTTCCCCATTTTATTTTTGCAAAACTACCTCCAATAGACTATTTTAGCTGCTAAATACGTGCATGTGCAAAATAAAGTAGAATTTTGACTGAATTCATGCTTCCTCTTTTTATTAATTGATCCTGATTTCAGGCTCCTCCCCGAGCCGATGTCGTGAATAGCTTAAAAAATGGAATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACCGTAGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGTACGTTTTTTCTTTCCTCTTCTCAATGGTTATTTTGTTGAAAAACGTAAAAGATCTTCAGATTTTGGATGTGAATATAATATTATATGCTGTATTGACTGCTAGAGCATATCAATCTACTTCTCCGATAAGTATAGACTATCGGGAGAGTATAAAGAATATACGTTCTTTTGAAAGGAACAATAGGAGCATGGCTGTTAGGATAGGTGAAAGACTTGGGAGTGACGCAAAACAGGAAATCTGCGAGATCCCACAATGGTTGGAGAGGGAACGAAATATTCTTTATGAGGATGTGGAAATCTCTTCCTAGTAGACGCGTTTTAAAATCTTGAGAGAAAGTCCAAAGAAGATAATATCTGCTAGCGGTGGGTTTGGGCCGTTACAAATGGTATCAGAATTAGATACCAAGTGATGAGGTTGAGCCCCAAAGGGGGTGGACACGACGTGGTGTGCCAGCAAGGACGCTAGGCTTCAAAGGGGGGTGGACACGACGTTGGTGTGCCAAGCAAGGAGCGCGTTGGGCTTGAAAGGGGGGTGGATTGTGAGGGTCCCACATCGATTGGAGAGGGAAAGGACATGCTTTGTGGATGGAACGTTGTAACGTGTTTTAAAAACTGAAGGGGGGTGGATTGTGAGATCCGACACCTCTCCCTAGTAGACGTGTTTTAAAACCTCGAGGTCGGTTGGAGAGGGGAACAAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTCGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTAGACCGTTACAAAACCTCACTCGAGCGTATAATGAACCCAACTTGTATAAGGCATATCAAAATGTGCTATGATTCTGATGAGATAGCCGTGTGGCATGTAACGACTCCTCAACTTTCCTTTTTGCAGGCTTCTGCAAACACAATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACTGAGAGTATTCCTATACCCCGAATGGCATAATCTCCACCGTCGCCCTTCTAGTTGCTTAGATTCGACATCAGAGGCAATGCGATATGAACTGATCACGAGTTCAGTGTCCATTTTCAAGTATCGTTTGTATTTTTGTTGCGAGCGTTCTCGTCCATCTGATCAGGGCGCTCTCTTTTCTGGTGTGAGCGGGAATCAAAAGCCGCTGTTGGTAGGGAACATGAATAGTTGCAGAGGTCCTCGAAGGTGTTTTCTGCGGATAGCTTCAATTGTATTAGAAGACTGAATCGGCCATGTCAAACTCTACTATCAAAATGTAGATTCAAATATGGTTCTTTGAGTTTTAAGCTCTCTTCCATTTTAATATTTACTTTGTTTTCCTTTTTCTTTAATGAAAAATATTTACATGGTTGGAACTTCTACATCTGGTTTATTACAAGATTTATT

mRNA sequence

CCAGCAATTCGCCTTCTGTAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCGAAGGTTTATTCGATCATCAATAATGCAGTCGCTACTCTCGCCGGTCGGTCGCGGCGGTCCCTTCCCGTCCGCCGCAGTTTATACATCGGAGTTACACCTCAGCTGTTTCAATCGTCGACCTTTCTCTGTCCGATACGCATCCAATTTCAAATCTCCTCATAATTCCCTCCCTTCATTTAGTGCAATTCGACCTCCTTCTTCTTTTTCGTTGTTGCTTTTCAAGAATTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGATACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTCCCCCAAACGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAGGAGGTTGGGTAATCTCGGATTTTGGGGACAGTTGGTGTGCACGATTGTCGCTGCTGTTATTCTTTCATTCTCTGTTGTCGTCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCCTTCGGGTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCCGATGTCGTGAATAGCTTAAAAAATGGAATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACCGTAGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCTTCTGCAAACACAATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACTGAGAGTATTCCTATACCCCGAATGGCATAATCTCCACCGTCGCCCTTCTAGTTGCTTAGATTCGACATCAGAGGCAATGCGATATGAACTGATCACGAGTTCAGTGTCCATTTTCAAGTATCGTTTGTATTTTTGTTGCGAGCGTTCTCGTCCATCTGATCAGGGCGCTCTCTTTTCTGGTGTGAGCGGGAATCAAAAGCCGCTGTTGGTAGGGAACATGAATAGTTGCAGAGGTCCTCGAAGGTGTTTTCTGCGGATAGCTTCAATTGTATTAGAAGACTGAATCGGCCATGTCAAACTCTACTATCAAAATGTAGATTCAAATATGGTTCTTTGAGTTTTAAGCTCTCTTCCATTTTAATATTTACTTTGTTTTCCTTTTTCTTTAATGAAAAATATTTACATGGTTGGAACTTCTACATCTGGTTTATTACAAGATTTATT

Coding sequence (CDS)

ATGCAGTCGCTACTCTCGCCGGTCGGTCGCGGCGGTCCCTTCCCGTCCGCCGCAGTTTATACATCGGAGTTACACCTCAGCTGTTTCAATCGTCGACCTTTCTCTGTCCGATACGCATCCAATTTCAAATCTCCTCATAATTCCCTCCCTTCATTTAGTGCAATTCGACCTCCTTCTTCTTTTTCGTTGTTGCTTTTCAAGAATTTTGGTACTCTGGAGCATAGAAGAGGACAGTTTTGCTCGGATACACGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTCCCCCAAACGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAGGAGGTTGGGTAATCTCGGATTTTGGGGACAGTTGGTGTGCACGATTGTCGCTGCTGTTATTCTTTCATTCTCTGTTGTCGTCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCCTTCGGGTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCCGATGTCGTGAATAGCTTAAAAAATGGAATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACCGTAGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCTTCTGCAAACACAATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACTGAGAGTATTCCTATACCCCGAATGGCATAA

Protein sequence

MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSSFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA

Homology

[Close]

BLAST of Carg16364-RA vs. NCBI nr
Match: KAG6571949.1 (Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011639.1 Protein TIC 21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 570.5 bits (1469), Expect = 8.7e-159
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR
Sbjct: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA
Sbjct: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 298

[Close]

BLAST of Carg16364-RA vs. NCBI nr
Match: XP_023553835.1 (protein TIC 21, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.9 bits (1439), Expect = 2.6e-155
Identity = 292/298 (97.99%), Postives = 294/298 (98.66%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFPSAAVYTSELH SCFNRRPFSVRYASN KSPHNSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHPSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLL KNFG+LEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF+
Sbjct: 61  FSLLLLKNFGSLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFK 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQG SPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA
Sbjct: 241 YYQGVSPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 298

[Close]

BLAST of Carg16364-RA vs. NCBI nr
Match: XP_022952785.1 (protein TIC 21, chloroplastic [Cucurbita moschata])

HSP 1 Score: 553.9 bits (1426), Expect = 8.4e-154
Identity = 291/298 (97.65%), Postives = 293/298 (98.32%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFP AAVYTSELHLSCFNRRPFSVRYASN KSP NSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLL KNFGTLEHRRGQFCSDT ASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF+
Sbjct: 61  FSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFK 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPR+A
Sbjct: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Carg16364-RA vs. NCBI nr
Match: XP_022972396.1 (protein TIC 21, chloroplastic [Cucurbita maxima])

HSP 1 Score: 550.4 bits (1417), Expect = 9.3e-153
Identity = 287/298 (96.31%), Postives = 291/298 (97.65%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASN KSPHNSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLL K FG LEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF+
Sbjct: 61  FSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFK 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQG  PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVT+PA ESIPIP++A
Sbjct: 241 YYQGVPPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTMPAAESIPIPKIA 298

[Close]

BLAST of Carg16364-RA vs. NCBI nr
Match: XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 501.9 bits (1291), Expect = 3.8e-138
Identity = 266/299 (88.96%), Postives = 283/299 (94.65%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPS 60
           MQSLLSPV R GPFP +AAVY+S+LHLS F+RRPFSVR++SN  SP NSL SF+A+R  S
Sbjct: 1   MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVRSSS 60

Query: 61  SFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
           S SLLL K FGTLEHRRGQF S+T ASSSPISP VPPNDEA+KAKLAQVAKRLEKTS+YF
Sbjct: 61  SSSLLLLKTFGTLEHRRGQFFSETHASSSPISPAVPPNDEADKAKLAQVAKRLEKTSKYF 120

Query: 121 RRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           +RLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SIPIPR+A
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 299

[Close]

BLAST of Carg16364-RA vs. ExPASy Swiss-Prot
Match: Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 184/302 (60.93%), Postives = 224/302 (74.17%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKS---PHNSLPSFSAIRP 60
           MQSLL P        + A+     H   FN +  S R    F           + S+ + 
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQH--SFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQS 60

Query: 61  PSSFSLLLFKNFGTLEHRRGQFCSDTRASSSPISP-TVPPNDEAEKAKLAQVAKRLEKTS 120
           P S S+  F+  G+    +  F   T A S P SP +VP ++E +KAKLAQVAKRLEKTS
Sbjct: 61  PPSLSVYGFQIGGS----KPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTS 120

Query: 121 RYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFG 180
           RYF+RLG++GFWGQLV T+VAAVILSFS+VVTGK TSPATFYATA GI AAF+SVFWSFG
Sbjct: 121 RYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFG 180

Query: 181 YIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTS 240
           YIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+
Sbjct: 181 YIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTT 240

Query: 241 SAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPR 299
           SA P+YQG S G SPVLALDVFLVQASANT+LSHFLGLV SLELLRSVT+P +ES+ +P+
Sbjct: 241 SANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPK 296

[Close]

BLAST of Carg16364-RA vs. ExPASy TrEMBL
Match: A0A6J1GMQ4 (protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.1e-154
Identity = 291/298 (97.65%), Postives = 293/298 (98.32%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFP AAVYTSELHLSCFNRRPFSVRYASN KSP NSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLL KNFGTLEHRRGQFCSDT ASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF+
Sbjct: 61  FSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFK 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPR+A
Sbjct: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298

[Close]

BLAST of Carg16364-RA vs. ExPASy TrEMBL
Match: A0A6J1I5V5 (protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.5e-153
Identity = 287/298 (96.31%), Postives = 291/298 (97.65%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPSS 60
           MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASN KSPHNSLPSFSAIRPPSS
Sbjct: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPSS 60

Query: 61  FSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFR 120
           FSLLL K FG LEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF+
Sbjct: 61  FSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYFK 120

Query: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180
           RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL
Sbjct: 121 RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRL 180

Query: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240
           SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP
Sbjct: 181 SDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIP 240

Query: 241 YYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           YYQG  PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVT+PA ESIPIP++A
Sbjct: 241 YYQGVPPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTMPAAESIPIPKIA 298

[Close]

BLAST of Carg16364-RA vs. ExPASy TrEMBL
Match: A0A0A0K4J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.8e-133
Identity = 263/299 (87.96%), Postives = 277/299 (92.64%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPS 60
           MQSLLSPV R GPFP +AAVY+S+LHLS F+RRP SVR++       NSLP FSAI P S
Sbjct: 1   MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHS------FNSLPPFSAI-PSS 60

Query: 61  SFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
           S SLLL K FGTL+H RGQ CS+TRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61  SSSLLLLKTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120

Query: 121 RRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
           +RLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180

Query: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
           LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240

Query: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 299
           PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SIPIPRMA
Sbjct: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292

[Close]

BLAST of Carg16364-RA vs. ExPASy TrEMBL
Match: A0A6J1D437 (protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132
Identity = 259/303 (85.48%), Postives = 276/303 (91.09%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIR---- 60
           MQSLLSPV   GP+ +AAVY+S+LHLS F+R P S+R+ASN  SP NS+PS +AIR    
Sbjct: 1   MQSLLSPVAPAGPYSAAAVYSSDLHLSRFHRLPLSLRHASNLNSPPNSIPSVNAIRSSYS 60

Query: 61  -PPSSFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKT 120
              SS SLL+ K FGTL +RRG FCS+TRASSSPISPT PPNDEAEKAKLAQVAKRLEKT
Sbjct: 61  SSSSSSSLLILKAFGTLGNRRGLFCSETRASSSPISPTAPPNDEAEKAKLAQVAKRLEKT 120

Query: 121 SRYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSF 180
           SRYF+RLGNLGFWGQLVCTIV+AVILSFSVV+TGKITSPATFYATAG IVAAFISVFWSF
Sbjct: 121 SRYFKRLGNLGFWGQLVCTIVSAVILSFSVVITGKITSPATFYATAGSIVAAFISVFWSF 180

Query: 181 GYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALT 240
           GYIRLSDKL RTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALT
Sbjct: 181 GYIRLSDKLLRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALT 240

Query: 241 SSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIP 299
           SSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPA ESIPIP
Sbjct: 241 SSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAAESIPIP 300

[Close]

BLAST of Carg16364-RA vs. ExPASy TrEMBL
Match: A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.4e-132
Identity = 263/306 (85.95%), Postives = 276/306 (90.20%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPF-PSAAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAI---- 60
           MQSLLSPV R GPF P+AAVY+S+ HLS  +RRPFSVR++       NSLP FSAI    
Sbjct: 1   MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHS------FNSLPQFSAISSSS 60

Query: 61  ---RPPSSFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRL 120
                 SS SLLL K FGTLEHRRGQ CS+TRASSSPISPTVPPNDEAEKAKLAQVAKRL
Sbjct: 61  SSSSSSSSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRL 120

Query: 121 EKTSRYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVF 180
           EKTSRYF+RLG+LGFWGQLVCTIVAAVILSFSVV+TGKI SPATFYATAGGIVAAFISVF
Sbjct: 121 EKTSRYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVF 180

Query: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAK 240
           WSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAK
Sbjct: 181 WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAK 240

Query: 241 ALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESI 299
           ALTSSAIPYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SI
Sbjct: 241 ALTSSAIPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSI 300

[Close]

BLAST of Carg16364-RA vs. TAIR 10
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-86
Identity = 184/302 (60.93%), Postives = 224/302 (74.17%), Query Frame = 0


Query: 1   MQSLLSPVGRGGPFPSAAVYTSELHLSCFNRRPFSVRYASNFKS---PHNSLPSFSAIRP 60
           MQSLL P        + A+     H   FN +  S R    F           + S+ + 
Sbjct: 1   MQSLLLPPASSSGVSAVALRPGFQH--SFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQS 60

Query: 61  PSSFSLLLFKNFGTLEHRRGQFCSDTRASSSPISP-TVPPNDEAEKAKLAQVAKRLEKTS 120
           P S S+  F+  G+    +  F   T A S P SP +VP ++E +KAKLAQVAKRLEKTS
Sbjct: 61  PPSLSVYGFQIGGS----KPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTS 120

Query: 121 RYFRRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFG 180
           RYF+RLG++GFWGQLV T+VAAVILSFS+VVTGK TSPATFYATA GI AAF+SVFWSFG
Sbjct: 121 RYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFG 180

Query: 181 YIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTS 240
           YIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+
Sbjct: 181 YIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTT 240

Query: 241 SAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPR 299
           SA P+YQG S G SPVLALDVFLVQASANT+LSHFLGLV SLELLRSVT+P +ES+ +P+
Sbjct: 241 SANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPK 296

The following BLAST results are available for this feature:

BLAST of Carg16364-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571949.1	8.7e-159	100.00	Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023553835.1	2.6e-155	97.99	protein TIC 21, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022952785.1	8.4e-154	97.65	protein TIC 21, chloroplastic [Cucurbita moschata]	[more]
XP_022972396.1	9.3e-153	96.31	protein TIC 21, chloroplastic [Cucurbita maxima]	[more]
XP_038888764.1	3.8e-138	88.96	protein TIC 21, chloroplastic [Benincasa hispida]	[more]

BLAST of Carg16364-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHU7	2.3e-85	60.93	Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1	[more]

BLAST of Carg16364-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMQ4	4.1e-154	97.65	protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4...	[more]
A0A6J1I5V5	4.5e-153	96.31	protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 S...	[more]
A0A0A0K4J8	6.8e-133	87.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1	[more]
A0A6J1D437	1.2e-132	85.48	protein TIC 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017409 PE=...	[more]
A0A5A7SP50	3.4e-132	85.95	Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ...	[more]

BLAST of Carg16364-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15290.1	1.6e-86	60.93	translocon at inner membrane of chloroplasts 21	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022051	Protein of unknown function DUF3611	PFAM	PF12263	DUF3611	coord: 110..284 e-value: 9.8E-55 score: 185.2
IPR022051	Protein of unknown function DUF3611	PANTHER	PTHR34548	PROTEIN TIC 21, CHLOROPLASTIC	coord: 1..297

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16364	Carg16364	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16364-RA:4	Carg16364-RA:4	exon
Carg16364-RA:3	Carg16364-RA:3	exon
Carg16364-RA:2	Carg16364-RA:2	exon
Carg16364-RA:1	Carg16364-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16364-RA:three_prime_utr	Carg16364-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16364-RA:cds	Carg16364-RA:cds_4	CDS
Carg16364-RA:cds	Carg16364-RA:cds_3	CDS
Carg16364-RA:cds	Carg16364-RA:cds_2	CDS
Carg16364-RA:cds	Carg16364-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16364-RA:five_prime_utr	Carg16364-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16364-RA	Carg16364-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane