Carg16260-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16260-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	carbon catabolite repressor protein 4 homolog 1-like
Location	Carg_Chr06: 2846643 .. 2854003 (-)
Sequence length	3746
RNA-Seq Expression	Carg16260-RA
Synteny	Carg16260-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCCTCTGCGCCCCGTCTCCAGGTCTTCTCTCGTTCTCTTCACTTTCAAAGGCATTAAAATCGGAAAAAGGAGAGAAAAAACTCCAAAATTTTGGCGCTTCCTTTCTGTAAAACCCTAATCAACGATCCATTTTTCTTCCTCCGTTCTTCTCTCTCTTGGATTCTCCGATTCTCCGATTCTCCGATTCCATTTGGCCGATCTGTTTCACTTCCCTCACTGTTCTACTTCCTGAATCTTCTCCTTTCAAGATCTCTGCGGATTTCTGATTTTTGAACCTGCAGTTTAGTAGCTGAACTCTGGCGGTTTTTCGTCGAGTGTAAATGGCGGATCCGCCAGGTATCCGCCATCTCTCCGCCTTTTGTGATCTACGTAAAGCTGCGAGTGTTTCTGTTCTTGTTGTTATTGGTTTTTGTTGCGTTCGATTCGCGCTCGTAGACTTGCCGTGCTGTGACGATTGACGTGACTGAAGCATGCTGAACGTGGTACGCGTGCATCTGCCCTCTGATATTCCTATTGTAGGTTGCGAACTCACGCCCTACGTGCTCCATCGACGGCCTGATAAGAACATTAGCACTGATGATGTTTCTGAGTCCGCTGCACTTGGCGGTCAATTCCTGAGATACAGATGGTAAGTTTGAGTGGTCTGTTGCGTAATTTGAATTGGTTTTCTGTCTGTGGTTACTGTCGTTTATTGGTTGTTTACTACTTCACGGTCATGGTACTTCAATTGGATGTGGTTGCGGTTTAGTGATTATTTTTAGGAGTTCGAACTTGTTTAGGGCTATTTTTGAAACAGCTTTTATTGTAAATTGACATGAACCGCAATGGCTGCATTTTTTTTTTTTTTTTTTTTGGTCTTTTGCATAGCTTGATTAGCATTTCAAACTAGTTTTCTGCTGTTCTTTCTATTGGCTTCCTGTTCTAAGGAAAAAGATGGCCATGCCCATTATTTGTGAATTAGAGATTAATTTGTATGAAATCATCTGTTTTTTTTATTAAGATACTAAATGTTATTTTCTATTGAATTGGTATTTTTGTACGTGTTCGGAGCTGTTACTGTCTTTTGTTTGTTTTTTAGTCATTTAGAAAGCTATCAAAGAAGGCGTGTTGGAGATTGAAAATTTAATGCTTGGAAAATCAACTCTCTTTGCTAAGAGGTTATGGTGGATCCTTTTACAACCCGATGTTTTGTGGCAACTAGCATGACGTTGTAATGAGTAAATAATGGGACTTCATGCTAGGTTGGATTCGGTCATAGTGACTCGAGTAGTTTCAAGAATTTTGGAAAAAAAAAAAGGAAAATTTATGATATCTAAATCAAGCTTTGGTCGTCAGAAATTTGTTGAACTTTTGTCCATAAGTGGATGGAGTTTCCTCATAAAAAGCTACATCTCTTAGTTTGATGAATTAAAAAAATAGAGGTGGGAGGTTGGGGGAGGGCATAATGTAGCTCTGGAGGGAGTGGCGGCTTCAATCATGGAGACGACGGGGAGTAAGAAATTAAGACTGTGAAGGAAAATGAGATAGAGATGAATCCTTTCACTGTTCTTTCATGCTAGATTATAGGGATTTTCGAAAGAAATGATCAAATTTATACAAAGGTCCAAGTAGAGGTGGAGATTTGAACCTTGGATGGAATAAAAGCCTTAGCCTTAAGCTAATATGTTATTTTCTTTTATTATTTTTAATTTCTGCGCAGAAGAATGTAGCCCTTAAATGTTATTACAGTTTGAAAATCCAATTATTGACTTCTCTGCGAGATCTATTTTTTTTTTCCTATGTAGATATTTGAAATTACCTTGGTTCGATATCTATCTTTTTTTCAAAATGATGCTGCTGATGTTAAACTTATTACATAAATTGTTTTCAGGTATCGCTTACAAAGTGATAAAAAAGTTGCTGTTTGTAGTGTACATCCTTCTGAGCAAGCCACTTTACAATGTTTAGGTTGCGTTAAAGCCAAAATTCCTGCTTTTAAAAGTTATCATTGCACCACCAAATGCTTTTCTGATTCTTGGCAGCATCATCGTGTTCTACATGACCGTGCTGCTAGTGCTATGAATGAAAATAGTAATGAAGAGGAAGAGTTATTTGGACGTCATAACAATAATAATAATGCAGCACCTGGTGCCATCAACCCCAGCTCTTCTAGCATGCTCAATGGTTCAACAACATTGTACCCTGCAGCTGTTACCCAAAAGACTGGTGTGGAAACTTGGTTAGAAGTTGGACGTTGTAAGAGTTACACACCAACGGCTGAAGATATTGGCCACGTTCTTAAGTTTGAATGTGCTGTGGTTGATGTGGAAACCATGTTATCTGTGGCATCTCCACTTACTGTCTCAACTTCTCGGGTCATTCCAGCTCCATCTCCTACTCCACGTCACTTAATACCTGTTAATGGGGTTGATACGATGGGAAAGATGGATTTGGATGGTCGAGTACCATCATCAGGAACTTTTACAGTGCTTTCCTACAATATTTTGGCTGATGTTTATGCCACAAGTGAAACATTCAGTTATTGCCCTTCATGGGCTCTTTCATGGCCATATCGGCGACAAAATCTGCTACGGGAAATAGTTGGCTATCGTGCAGATATAATTTGTCTTCAGGAGGTAGGTATCACTCTGTCTTCATGTTTGTGTACAAATATAATTTTGTCTATAGTTGCGTTGGTGGCATATGTTAAAATTCAAGAAGTTTGCTCTGTTAAGAATGAAATTTTCTAAGCATTATAAATTTTCAGGACCTTGCAATACCGTATATCTACTTTAAAGTCGATAAAGAATGCAGTAAATATTTTTGAAGAAATTTGACTACATTTTAATAAAACACGTTTGGTAGATGGAAATACATAAATATGATATTTGGGTACTAGCTGCAGTACTCTGAGACCTCCATTTGGTGTTGGTATGGATTTCAAGTGATTCTTTGGACTAAACTGTGTTGTGTATTTACATAATCATAAGTTCATTGCCCGTAAGAATTCTTCATTTGGCATTGATTTTGTTTTGTAAGAGATCTGGTGCTGTTATGATCTCTAAAATGTAAGCTTATGTTTTTTTTAACCAATGTCAGTATTTACTTATTTTGGTTATAACTTTATTGTTTATAAGCATGTTTCATTTTGTATTAATTTTGTAAATTTCTTTAAAAAGATTTGTCATACTGACTGAAACAATCTAGGCCACAGCACGTGTTAATTTTCTGTGATGTATGGAATATGTGACGAAAGTGGAGTGTCAAGCTAATGTTTATTGATTATTGATCACACGTGTCAGTAAGGCTCAAGTTAGACATTCAATTGTGCAATTTGAATGATATAGAGGATGCCTTCTAATTATATAAAAAAAAATGACACTAAAAATATTTCTATTTTCAGCTCAAAGAGATGAGTAGTATCCCAAATAATGAGAGATGGAATAGATAGGTCCAAGGAAACTATAAAAGAGCAAAAATTTAAAACGTTCTCTTTCTTGTTTATTCTTTCTGGAGTGTTGACTTTGTTAACTTCACAGCATTGTGAAAAATTGGGAATTTTCTCCAACTTTCTTTTAGTCAAAATATTGAATGTTCGTGTATGAAGCAGTTTACAAGATATTCATCTTTTCGAAACAGGTTCAGAGCGATCACTTTCTGGAATTTTTTGCTCCTGAACTTGACAAACATGGTTATCAAGCACTTTACAAGAGAAAAACCAATGAGGTTGATTTCACACTTTTCATTTGTATATTCCCTATATATAATATTTATATTCAATTTTAAGGTCTGTCTGTTCTCATCCTCTGTATTTATCTTTTTCAGGTCTACAATGGGAACATTCAAACAATTGATGGCTGTGCAACATTTTTTCGTAGAGATAGATTTGCACATGTCAAAAAATATGAGGTTAGGAAGTGTCTTCATCATTTTACATTCTGTGTGTTGCTGCGTCCTAAATGTATTTTGGCTTGTTTGCAGGTTGAGTTCAACAAAGCTGCACAATCTTTGACTGACCCAGCTACTATTTTAACTGCTCAAAAGAGAAATGCTTTAAACAGATTAATCAAGGTGATTAGCTTGGTGCTTCTTTCCCACCTCTTAGCCATGCATTTTGACTGCAAAGCTTGTTGTGAATTAATATGTAAGTTTGTGCTGCATGGATTGTTAGGATGATGTTGCACTTATCGTAGTTCTTGAATCAAAATTCAGCACTCCAACGGTCGATAATCCAGGAAAAAGGCAGCTTGTTTGCGTGGTAAGAATTCTGGAATGTTTGTTTAATGTTTCTGTGGTCTGACTTTGTCGTGCCTTCAATATAACTGCTAGTTAATATTATTGATGAGGCTTGTGAATTTACTATAAATATCGAAATTCTATTTTTTCTTTCCAAAGGTTTTTCTTTTAGGACTGCTAAATATGCAGCAGTGTGTCATGCTTGCTTTTTCTGATGCATCATGGAAAACCTATTTTTCGGTGAACTTAGTGGGTTATTCTATGTCCAAAGCCTAGAATATGTTCGGTATTCTTGGACACCCTCATGGGTTTTGATTGTCCCTGGACACTTTTGGTTTCTGTTTCGAAATTTCAACCGTGCTATTTGATATGCTACTCTACAAGCAGAGTCATAGAGTTGGATTCTTTTGGTTGTTTTTCTGCAATTTGCAGTCGTTGGGGGAGCCAGACTTGCAGTCCCCTTACCCCTTTTCTCCTTCTTAGATTCCAGTGTTCGCTAACGTTTCCTATTTCTGTTTATTAGGCTAATACGCATATTAATGGGAATCAAGATTTAAAAGATGTCAAACTCTGGCAGGTAATTTGATTTTCATTATACTATATTGTATTTTCCTTCTTTTTCCTTTTCTCCCCTTGATTATGACTGGTTTGGTTTAACATTCTGGAAACTAGGTGCATACTTTATTGAAAGGACTGGAGAAAATAGCTGTTAGTGCAGATATTCCAATGTTGGTCTGTGGGGATTTTAATTCTGTTCCTGGAAGGTTTGTTTTCTGCGTAGTTCTTTATTTGCACTTATTGTCAAATAGCACCATATGGTTATGTCAAAGATCTGCACAATTATCTTAGTAATCGAACGTTGTTGCAGTGCCCCACATCATCTCCTTGCTAGGGGGAAGGTGGAACCAACACATCCAGATTTAGCTGTAGATTCTCTAAATCTATGTCAGCCACATAGCAAATTGTCACATCAACTACCTTTGGTAAATCTTCTATCTACATTTTCAATGTCTGTCGATAAGTTCATCTGTTTTTCACCTTTAAGGTTGTGGTCAAGAATTAATAAATGGAGGTCGGCTTGGAAGTTATATTCCCTGTTGGAAAGCTGAATGATGATTCCTCTTCAGGTTAGTGCATACTCCTACTTTGCAATAAAGGGAGTTGGTAACGGTTCAGATAAGCAGAGGAAAAGGCTGGATCCTACAACAAATGAACCCTTATTTACGAATTGTACTAGAGATTTCATTGGAACCCTGGACTACATTTTCTACACAGGTATATCTCTGCCTACAGATTTCTGTTCTTTTTTTCTTTTTTTTTTTTTAATTCATTTTATTCAACTGGGATGAATTTTGAAATGGAAATTTGATCACTGTTTCCCCAGCGGACACTTTAACAGTGGAGTCTTTGTTAGAGCTCCTGGATGAGGAGAGCTTGAGGAAAGATACAGCACTTCCATCCCCAATATGGTCCTCCGATCACACAGCACTCCTTGCCGAGTTTCGGTGCAAATCTCGGTCTAGACGTTAACCACGCATAGTGTAGGTAACTCCTTTCTACATCGTCTAACCATTAGTTATTGTCTTGCTTATCTTCTTTATTCTATCTTACATTTCATTGCGGGAAAAGGCAAATCTAAAAGTAAAATTAATTATTGGTTATTTGTAGTTCAGGCGTGGAAGAAAAGCATCGTAGCAAAGATGCAGAAGAAAGAGAAGTTTGTGTTTGTTGAGAAAGTAAATTGAATATAGTAGGAATGGTGGCGGATCATGCGGTGTTCAATGTCCACAGGTATCTCCACATGAGATCTCATCGTCACTATGATCTGCTTTTGTATTTGTGGTACCTTCTTCATCTCATAGTAAAAGTTTTTTTCTTCGATCTCATGCCTTAATCCCTTTGCATTGCACACCACTTTTGATTCTTTCCTTTCACTCTCCAATACCAATTTCGTAACCTGGGCACAAGTGCAAAACCTTACCCCTCCCTCTGTAGAGCCCCTTTCTAAAAGAGAGAGATGCCTAAATGACCTTTGCAGCAATTATATTTTATCTAATGTCTTTTTTTCCCCTTTTGCTTAGAGAGTGGGAATGAGAGATAAATATGCATGTAGTCGGGTTGATGGACGACTGGAGTAACGAACGAGAGAAGATTGTGAAATGCCCTACTAAGTATATGACAGTTTTGAAATAAGAAGCTTTGATAGTTTAATGCGCCTGGATTTAATGTATTGTGCAGAAGTATTAGAGTAGGATTAACAGCTTTTTGAGGAATGTGATGGAAGAAACAACTAGACTAATTAGAGTTCTCTTATCTACATTGGTTAAGGATGTCAGCTTTGGGGTAGTTGAGTGGTTAAGGTATTTGTGGTGCAATTGGTGAAAGGAGGGCTAAACCATGTTCTATGGTTCTAGAATTTGATGACCAAGTCGAAGTGGTTATTTAAAAATTATTTTTCATAGACGGTTATTTTGAGGAAAAAAATTGTGTAGAATATGTTCTGGTACTTCTTATCTTTAAACATTTTTACTTGGTGATGAAAATATAACCACTATGGTAATGAAAATATAACCACTATGGTAATGAAATAAAGAATAAATCTCTATTTTGATGGTTATATATGTAGAAATTAGATAGATTCCATCTAATCCAATGTTACCAATACGTTGAAACTTTGTTTGTTTTTGTGTTCAGGTAAGTGAACAAACCGAATATAAGCACATTATTTAGTAAATGTGTTGGAATTGTTGTTTAAAATTAATGTTTTTCTTTTAACTGGACTATAAACACGAGAACCGGACCCATTTTGGTAAACTGTAAAATTCTCTTACATTAACCATTCATTTTTCCTTTTTTTTCCCCTCAATCGTGAGATGTGCAATTCTTAGGCGCAATTTTTTTTTTCTTTTGATGAGGTAAAGTGATTTAATCTGCAATTTTTGGCCATTAAGTAGGGTACCTTTGGGAGTATTTATGGTAAAAACTTCAAAAACTTTTGTCAAACCATGCAACAAGGAATAAAAACATCTATTGTGAAGTAATAAAATAGTGTTATGAAGAAAACAGTAAAAAGAGAGCAATTGGTGTTTAGGTTCACAATTTGTGAACAGAAAACACTTCGCTTTTAAAAAGTTCGAAACTA

mRNA sequence

TTCTTCCTCTGCGCCCCGTCTCCAGGTCTTCTCTCGTTCTCTTCACTTTCAAAGGCATTAAAATCGGAAAAAGGAGAGAAAAAACTCCAAAATTTTGGCGCTTCCTTTCTGTAAAACCCTAATCAACGATCCATTTTTCTTCCTCCGTTCTTCTCTCTCTTGGATTCTCCGATTCTCCGATTCTCCGATTCCATTTGGCCGATCTGTTTCACTTCCCTCACTGTTCTACTTCCTGAATCTTCTCCTTTCAAGATCTCTGCGGATTTCTGATTTTTGAACCTGCAGTTTAGTAGCTGAACTCTGGCGGTTTTTCGTCGAGTGTAAATGGCGGATCCGCCAGGTATCCGCCATCTCTCCGCCTTTTGTGATCTACGTAAAGCTGCGAGTGTTTCTGTTCTTGTTGTTATTGGTTTTTGTTGCGTTCGATTCGCGCTCGTAGACTTGCCGTGCTGTGACGATTGACGTGACTGAAGCATGCTGAACGTGGTACGCGTGCATCTGCCCTCTGATATTCCTATTGTAGGTTGCGAACTCACGCCCTACGTGCTCCATCGACGGCCTGATAAGAACATTAGCACTGATGATGTTTCTGAGTCCGCTGCACTTGGCGGTCAATTCCTGAGATACAGATGGTATCGCTTACAAAGTGATAAAAAAGTTGCTGTTTGTAGTGTACATCCTTCTGAGCAAGCCACTTTACAATGTTTAGGTTGCGTTAAAGCCAAAATTCCTGCTTTTAAAAGTTATCATTGCACCACCAAATGCTTTTCTGATTCTTGGCAGCATCATCGTGTTCTACATGACCGTGCTGCTAGTGCTATGAATGAAAATAGTAATGAAGAGGAAGAGTTATTTGGACGTCATAACAATAATAATAATGCAGCACCTGGTGCCATCAACCCCAGCTCTTCTAGCATGCTCAATGGTTCAACAACATTGTACCCTGCAGCTGTTACCCAAAAGACTGGTGTGGAAACTTGGTTAGAAGTTGGACGTTGTAAGAGTTACACACCAACGGCTGAAGATATTGGCCACGTTCTTAAGTTTGAATGTGCTGTGGTTGATGTGGAAACCATGTTATCTGTGGCATCTCCACTTACTGTCTCAACTTCTCGGGTCATTCCAGCTCCATCTCCTACTCCACGTCACTTAATACCTGTTAATGGGGTTGATACGATGGGAAAGATGGATTTGGATGGTCGAGTACCATCATCAGGAACTTTTACAGTGCTTTCCTACAATATTTTGGCTGATGTTTATGCCACAAGTGAAACATTCAGTTATTGCCCTTCATGGGCTCTTTCATGGCCATATCGGCGACAAAATCTGCTACGGGAAATAGTTGGCTATCGTGCAGATATAATTTGTCTTCAGGAGGTTCAGAGCGATCACTTTCTGGAATTTTTTGCTCCTGAACTTGACAAACATGGTTATCAAGCACTTTACAAGAGAAAAACCAATGAGGTCTACAATGGGAACATTCAAACAATTGATGGCTGTGCAACATTTTTTCGTAGAGATAGATTTGCACATGTCAAAAAATATGAGGTTGAGTTCAACAAAGCTGCACAATCTTTGACTGACCCAGCTACTATTTTAACTGCTCAAAAGAGAAATGCTTTAAACAGATTAATCAAGGATGATGTTGCACTTATCGTAGTTCTTGAATCAAAATTCAGCACTCCAACGGTCGATAATCCAGGAAAAAGGCAGCTTGTTTGCGTGGCTAATACGCATATTAATGGGAATCAAGATTTAAAAGATGTCAAACTCTGGCAGGTGCATACTTTATTGAAAGGACTGGAGAAAATAGCTGTTAGTGCAGATATTCCAATGTTGGTCTGTGGGGATTTTAATTCTGTTCCTGGAAGTGCCCCACATCATCTCCTTGCTAGGGGGAAGGTGGAACCAACACATCCAGATTTAGCTGTAGATTCTCTAAATCTATGTCAGCCACATAGCAAATTGTCACATCAACTACCTTTGGTTAGTGCATACTCCTACTTTGCAATAAAGGGAGTTGGTAACGGTTCAGATAAGCAGAGGAAAAGGCTGGATCCTACAACAAATGAACCCTTATTTACGAATTGTACTAGAGATTTCATTGGAACCCTGGACTACATTTTCTACACAGCGGACACTTTAACAGTGGAGTCTTTGTTAGAGCTCCTGGATGAGGAGAGCTTGAGGAAAGATACAGCACTTCCATCCCCAATATGGTCCTCCGATCACACAGCACTCCTTGCCGAGTTTCGGTGCAAATCTCGGTCTAGACGTTAACCACGCATAGTGTAGTTCAGGCGTGGAAGAAAAGCATCGTAGCAAAGATGCAGAAGAAAGAGAAGTTTGTGTTTGTTGAGAAAGTAAATTGAATATAGTAGGAATGGTGGCGGATCATGCGGTGTTCAATGTCCACAGGTATCTCCACATGAGATCTCATCGTCACTATGATCTGCTTTTGTATTTGTGGTACCTTCTTCATCTCATAGTAAAAGTTTTTTTCTTCGATCTCATGCCTTAATCCCTTTGCATTGCACACCACTTTTGATTCTTTCCTTTCACTCTCCAATACCAATTTCGTAACCTGGGCACAAGTGCAAAACCTTACCCCTCCCTCTGTAGAGCCCCTTTCTAAAAGAGAGAGATGCCTAAATGACCTTTGCAGCAATTATATTTTATCTAATGTCTTTTTTTCCCCTTTTGCTTAGAGAGTGGGAATGAGAGATAAATATGCATGTAGTCGGGTTGATGGACGACTGGAGTAACGAACGAGAGAAGATTGTGAAATGCCCTACTAAGTATATGACAGTTTTGAAATAAGAAGCTTTGATAGTTTAATGCGCCTGGATTTAATGTATTGTGCAGAAGTATTAGAGTAGGATTAACAGCTTTTTGAGGAATGTGATGGAAGAAACAACTAGACTAATTAGAGTTCTCTTATCTACATTGGTTAAGGATGTCAGCTTTGGGGTAGTTGAGTGGTTAAGGTATTTGTGGTGCAATTGGTGAAAGGAGGGCTAAACCATGTTCTATGGTTCTAGAATTTGATGACCAAGTCGAAGTGGTTATTTAAAAATTATTTTTCATAGACGGTTATTTTGAGGAAAAAAATTGTGTAGAATATGTTCTGGTACTTCTTATCTTTAAACATTTTTACTTGGTGATGAAAATATAACCACTATGGTAATGAAATAAAGAATAAATCTCTATTTTGATGGTTATATATGTAGAAATTAGATAGATTCCATCTAATCCAATGTTACCAATACGTTGAAACTTTGTTTGTTTTTGTGTTCAGGTAAGTGAACAAACCGAATATAAGCACATTATTTAGTAAATGTGTTGGAATTGTTGTTTAAAATTAATGTTTTTCTTTTAACTGGACTATAAACACGAGAACCGGACCCATTTTGGTAAACTGTAAAATTCTCTTACATTAACCATTCATTTTTCCTTTTTTTTCCCCTCAATCGTGAGATGTGCAATTCTTAGGCGCAATTTTTTTTTTCTTTTGATGAGGTAAAGTGATTTAATCTGCAATTTTTGGCCATTAAGTAGGGTACCTTTGGGAGTATTTATGGTAAAAACTTCAAAAACTTTTGTCAAACCATGCAACAAGGAATAAAAACATCTATTGTGAAGTAATAAAATAGTGTTATGAAGAAAACAGTAAAAAGAGAGCAATTGGTGTTTAGGTTCACAATTTGTGAACAGAAAACACTTCGCTTTTAAAAAGTTCGAAACTA

Coding sequence (CDS)

ATGCTGAACGTGGTACGCGTGCATCTGCCCTCTGATATTCCTATTGTAGGTTGCGAACTCACGCCCTACGTGCTCCATCGACGGCCTGATAAGAACATTAGCACTGATGATGTTTCTGAGTCCGCTGCACTTGGCGGTCAATTCCTGAGATACAGATGGTATCGCTTACAAAGTGATAAAAAAGTTGCTGTTTGTAGTGTACATCCTTCTGAGCAAGCCACTTTACAATGTTTAGGTTGCGTTAAAGCCAAAATTCCTGCTTTTAAAAGTTATCATTGCACCACCAAATGCTTTTCTGATTCTTGGCAGCATCATCGTGTTCTACATGACCGTGCTGCTAGTGCTATGAATGAAAATAGTAATGAAGAGGAAGAGTTATTTGGACGTCATAACAATAATAATAATGCAGCACCTGGTGCCATCAACCCCAGCTCTTCTAGCATGCTCAATGGTTCAACAACATTGTACCCTGCAGCTGTTACCCAAAAGACTGGTGTGGAAACTTGGTTAGAAGTTGGACGTTGTAAGAGTTACACACCAACGGCTGAAGATATTGGCCACGTTCTTAAGTTTGAATGTGCTGTGGTTGATGTGGAAACCATGTTATCTGTGGCATCTCCACTTACTGTCTCAACTTCTCGGGTCATTCCAGCTCCATCTCCTACTCCACGTCACTTAATACCTGTTAATGGGGTTGATACGATGGGAAAGATGGATTTGGATGGTCGAGTACCATCATCAGGAACTTTTACAGTGCTTTCCTACAATATTTTGGCTGATGTTTATGCCACAAGTGAAACATTCAGTTATTGCCCTTCATGGGCTCTTTCATGGCCATATCGGCGACAAAATCTGCTACGGGAAATAGTTGGCTATCGTGCAGATATAATTTGTCTTCAGGAGGTTCAGAGCGATCACTTTCTGGAATTTTTTGCTCCTGAACTTGACAAACATGGTTATCAAGCACTTTACAAGAGAAAAACCAATGAGGTCTACAATGGGAACATTCAAACAATTGATGGCTGTGCAACATTTTTTCGTAGAGATAGATTTGCACATGTCAAAAAATATGAGGTTGAGTTCAACAAAGCTGCACAATCTTTGACTGACCCAGCTACTATTTTAACTGCTCAAAAGAGAAATGCTTTAAACAGATTAATCAAGGATGATGTTGCACTTATCGTAGTTCTTGAATCAAAATTCAGCACTCCAACGGTCGATAATCCAGGAAAAAGGCAGCTTGTTTGCGTGGCTAATACGCATATTAATGGGAATCAAGATTTAAAAGATGTCAAACTCTGGCAGGTGCATACTTTATTGAAAGGACTGGAGAAAATAGCTGTTAGTGCAGATATTCCAATGTTGGTCTGTGGGGATTTTAATTCTGTTCCTGGAAGTGCCCCACATCATCTCCTTGCTAGGGGGAAGGTGGAACCAACACATCCAGATTTAGCTGTAGATTCTCTAAATCTATGTCAGCCACATAGCAAATTGTCACATCAACTACCTTTGGTTAGTGCATACTCCTACTTTGCAATAAAGGGAGTTGGTAACGGTTCAGATAAGCAGAGGAAAAGGCTGGATCCTACAACAAATGAACCCTTATTTACGAATTGTACTAGAGATTTCATTGGAACCCTGGACTACATTTTCTACACAGCGGACACTTTAACAGTGGAGTCTTTGTTAGAGCTCCTGGATGAGGAGAGCTTGAGGAAAGATACAGCACTTCCATCCCCAATATGGTCCTCCGATCACACAGCACTCCTTGCCGAGTTTCGGTGCAAATCTCGGTCTAGACGTTAA

Protein sequence

MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDKKVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENSNEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSRR

Homology

[Close]

BLAST of Carg16260-RA vs. NCBI nr
Match: KAG6596662.1 (Carbon catabolite repressor protein 4-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028200.1 Carbon catabolite repressor protein 4-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. NCBI nr
Match: XP_022938709.1 (carbon catabolite repressor protein 4 homolog 1-like [Cucurbita moschata] >XP_022938717.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita moschata] >XP_022938726.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita moschata] >XP_022938733.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 600/601 (99.83%), Postives = 600/601 (99.83%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVD MGKMDL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDMMGKMDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. NCBI nr
Match: XP_023539808.1 (carbon catabolite repressor protein 4 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023539809.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023539810.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023539811.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1218.8 bits (3152), Expect = 0.0e+00
Identity = 599/601 (99.67%), Postives = 600/601 (99.83%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVSSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQ+KRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQKKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. NCBI nr
Match: XP_023005723.1 (carbon catabolite repressor protein 4 homolog 1-like [Cucurbita maxima] >XP_023005724.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita maxima] >XP_023005725.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita maxima] >XP_023005726.1 carbon catabolite repressor protein 4 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 599/601 (99.67%), Postives = 600/601 (99.83%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGK+DL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKIDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVSSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. NCBI nr
Match: XP_022151398.1 (carbon catabolite repressor protein 4 homolog 1-like [Momordica charantia] >XP_022151399.1 carbon catabolite repressor protein 4 homolog 1-like [Momordica charantia] >XP_022151400.1 carbon catabolite repressor protein 4 homolog 1-like [Momordica charantia] >XP_022151401.1 carbon catabolite repressor protein 4 homolog 1-like [Momordica charantia])

HSP 1 Score: 1144.0 bits (2958), Expect = 0.0e+00
Identity = 568/607 (93.57%), Postives = 578/607 (95.22%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+VVRVHLPSDIPIVGCELTPYVLHRRPDKNI+TDDVSESA L GQFLRYRWYRLQSDK
Sbjct: 1   MLSVVRVHLPSDIPIVGCELTPYVLHRRPDKNINTDDVSESAPLDGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNEN 
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENG 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSS------SMLNGSTTLYPAAVTQKTGVETWLEVGR 180
           NEEEELFGR+NNN+ +  GAIN SSS      S+ NGST LYP AVTQKTGVETWLEVGR
Sbjct: 121 NEEEELFGRYNNNSTS--GAINSSSSSSTLSTSLTNGSTPLYPTAVTQKTGVETWLEVGR 180

Query: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDT 240
           CKSYTPTAEDIGHVLKFECAVVDVETML VASPLTV TSRVIPAPS +PR LIPVNGVD 
Sbjct: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLPVASPLTVLTSRVIPAPSASPRRLIPVNGVDV 240

Query: 241 MGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300
           MGKMDLDGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA
Sbjct: 241 MGKMDLDGRVSSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300

Query: 301 DIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360
           DIICLQEVQSDHF+EFFAPE DKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV
Sbjct: 301 DIICLQEVQSDHFVEFFAPEFDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360

Query: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420
           KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL
Sbjct: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420

Query: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480
           VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNS+PGSAPHHLLAR
Sbjct: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSIPGSAPHHLLAR 480

Query: 481 GKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEP 540
           GKVEPTHPDLAVD LNLCQPHSKLSHQLPLVSAYS FAIKGVG   DKQRKRLDPTTNEP
Sbjct: 481 GKVEPTHPDLAVDPLNLCQPHSKLSHQLPLVSAYSSFAIKGVGISLDKQRKRLDPTTNEP 540

Query: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFR 600
           LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP+WSSDH ALLAEFR
Sbjct: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPVWSSDHIALLAEFR 600

Query: 601 CKSRSRR 602
           CKSRSRR
Sbjct: 601 CKSRSRR 605

[Close]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot
Match: Q8W0Z9 (Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CCR4-1 PE=2 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 2.5e-256
Identity = 438/603 (72.64%), Postives = 507/603 (84.08%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+V+RVHLPS+IPIVGCELTPYVL RRPDK  STDDV ESA L G FL+YRW+R+QSDK
Sbjct: 1   MLSVIRVHLPSEIPIVGCELTPYVLLRRPDKTPSTDDVPESAPLEGHFLKYRWFRVQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVA+CSVHPSE ATLQCLGC+K+K+P  KSYHC+TKCFSD+WQHHRVLH+RAASA  E  
Sbjct: 61  KVAICSVHPSETATLQCLGCLKSKVPVAKSYHCSTKCFSDAWQHHRVLHERAASAATE-G 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGV--ETWLEVGRCKSY 180
           N+EEEL      N++ +   +  +S S+ NGS+++YP+A+TQKTG   ET +EVGR K+Y
Sbjct: 121 NDEEEL---PRLNSSGSGSGVLSTSVSLTNGSSSVYPSAITQKTGAGGETLVEVGRSKTY 180

Query: 181 TPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKM 240
           TP A+DI HVLKFEC VV+ ET  +V    T+ TSRVIPAPSP+PR LI ++G D  G +
Sbjct: 181 TPMADDICHVLKFECVVVNAETKQNVGLSCTILTSRVIPAPSPSPRRLISISGTDVTGHL 240

Query: 241 DLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIIC 300
           D +GR  S GTFTVLSYNIL+D YA+S+ +SYCP+WAL+W YRRQNLLREIV YRADI+C
Sbjct: 241 DSNGRPLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVC 300

Query: 301 LQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYE 360
           LQEVQ+DHF EFF PELDKHGYQ L+KRKTNEV+ GN  TIDGCATFFRRDRF+HVKKYE
Sbjct: 301 LQEVQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYE 360

Query: 361 VEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVA 420
           VEFNKAAQSLT+ A I  +QK+NALNRL+KD+VALIVVLE+KF +   DNPGKRQL+CVA
Sbjct: 361 VEFNKAAQSLTE-AIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVA 420

Query: 421 NTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVE 480
           NTH+N   +LKDVKLWQVHTLLKGLEKIA SADIPMLVCGDFN+VP SAPH LLA GKV+
Sbjct: 421 NTHVNVPHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVD 480

Query: 481 PTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTN 540
           P HPDL VD L + +PHSKL+HQLPLVSAYS FA  G    +++QR+RLDP ++EPLFTN
Sbjct: 481 PLHPDLMVDPLGILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTN 540

Query: 541 CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSR 600
           CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP WSSDH ALLAEFRC  R
Sbjct: 541 CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCMPR 598

Query: 601 SRR 602
           +RR
Sbjct: 601 ARR 598

[Close]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot
Match: Q9M2F8 (Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CCR4-2 PE=2 SV=2)

HSP 1 Score: 870.9 bits (2249), Expect = 8.2e-252
Identity = 431/609 (70.77%), Postives = 496/609 (81.44%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+V+RVHLPS+IPIVGCELTPYVL RRPDKN +TDDV ESA L G FLRYRWYR+QSDK
Sbjct: 1   MLSVIRVHLPSEIPIVGCELTPYVLVRRPDKNSTTDDVPESAPLEGYFLRYRWYRVQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KV +CSVHP+EQATLQC+ C K +    KSYHC+ KCF+D+WQHHR LH+RAA+    N+
Sbjct: 61  KVTICSVHPTEQATLQCVFCSKRRSLVPKSYHCSPKCFTDAWQHHRTLHERAAA--ENNA 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSML-------NGSTTLYPAAVTQKTGVETWLEVG 180
           NE+++L    N NN+A  G++  S S  +       NG    YP+ +TQK G ET +EVG
Sbjct: 121 NEDDDL----NRNNSAGSGSLAGSLSGSMSNLSIANNGPAPFYPSNITQKNGGETLVEVG 180

Query: 181 RCKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVD 240
            CK+YTPTA+DI HVLKFEC V + ET   V  P T+ TSRVIPAPSP+PR LIPVNG D
Sbjct: 181 GCKTYTPTADDISHVLKFECVVANAETKQIVGHPSTILTSRVIPAPSPSPRKLIPVNGAD 240

Query: 241 TMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYR 300
            MG +D D R+ S+G+FTVLSYNIL+D  A+S+ +SYCP WALSWPYRRQNLLREIVGYR
Sbjct: 241 GMGHLDQDARIQSAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYR 300

Query: 301 ADIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAH 360
           AD++CLQEVQSDHF E FAPELDKHGYQALYKRKTNEV +G+   IDGCATFFRRDRF+H
Sbjct: 301 ADVVCLQEVQSDHFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSH 360

Query: 361 VKKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQ 420
           VKKY+VEFNKAAQSLTD A I  AQKR ALNRL+KD++ALIVVLE+KF     D  GKRQ
Sbjct: 361 VKKYDVEFNKAAQSLTD-ALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQ 420

Query: 421 LVCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLA 480
           L+CVANTH+N  QDLKDVKLWQVHTLLKGLEKIA SADIPMLVCGDFN++PGSAPH LL 
Sbjct: 421 LICVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTLPGSAPHTLLV 480

Query: 481 RGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGV-GNGSDKQRKRLDPTTN 540
            GKV+P HPDLAVD LN+ +PH+KL+HQLPLVSAYS F  KG+ G G ++ R+R+D  TN
Sbjct: 481 MGKVDPMHPDLAVDPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGLEQHRRRIDLNTN 540

Query: 541 EPLFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAE 600
           EPLFTNCTRDFIGT DYIFYTADTL VESLLELLDE+ LRKDTALPSP WSS+H ALLAE
Sbjct: 541 EPLFTNCTRDFIGTHDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAE 600

Query: 601 FRCKSRSRR 602
           FRC  R+RR
Sbjct: 601 FRCTPRTRR 602

[Close]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot
Match: O74874 (CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ccr4 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.0e-49
Identity = 125/373 (33.51%), Postives = 193/373 (51.74%), Query Frame = 0


Query: 250 FTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHFLE 309
           FT++SYN+L + YATS  + Y PSWALSW YR+  +++E+ GY ADIICLQEV  +++  
Sbjct: 336 FTIMSYNVLCERYATSTLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQEVDVENYDT 395

Query: 310 FFAPELDKHGYQALY--KRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVEFNKAAQS 369
           FFAP++   GY+ ++  K +   +     + +DGCATFF+  ++   +K  +E+N+ A S
Sbjct: 396 FFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMVIEYNQ-APS 455

Query: 370 LTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANTHINGNQD 429
           L      LT+   N +  + KD++++I +LE+K         G R  + VAN HI+ +  
Sbjct: 456 LRRQDIKLTSNMYNRV--MTKDNISVITLLENK-------ENGSR--LIVANCHIHWDPQ 515

Query: 430 LKDVKLWQVHTLLKGLEKIAVS-----------------------ADIPMLVCGDFNSVP 489
            +DVK+ QV  L+  + ++A                           IP+L+CGDFNSV 
Sbjct: 516 FRDVKVIQVAMLMDEIAQVATKFRNMPSKIPSDQLKDERPTYPEYLKIPILICGDFNSVQ 575

Query: 490 GSAPHHLLARGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQR 549
           GS  +  L+ G +   H D   +       + + SH   L SAY                
Sbjct: 576 GSGVYDFLSSGSISQNHEDFMNNDYGEYTVNGR-SHAFNLKSAYG--------------- 635

Query: 550 KRLDPTTNEPL-FTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWS 597
                  +E L FTN T  F G +D+I+YT ++L V  LL+ +D++ L      P+  + 
Sbjct: 636 ------ESEALSFTNYTPGFKGAIDHIWYTGNSLEVTGLLKGVDKDYLSGVVGFPNAHFP 674

[Close]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot
Match: Q1EA11 (CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Coccidioides immitis (strain RS) OX=246410 GN=CCR4 PE=3 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 2.0e-48
Identity = 140/428 (32.71%), Postives = 208/428 (48.60%), Query Frame = 0


Query: 223 PRHLIPVNG----VDTMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSW 282
           P HL P N     +D  GK   +G   +   FT L+YN L D YAT++ + Y PS AL+W
Sbjct: 354 PVHLPPSNRDWLILDETGKNSANG--GNDNKFTALTYNTLCDRYATNQQYGYAPSRALAW 413

Query: 283 PYRRQNLLREIVGYRADIICLQEVQSDHFLEFFAPELDKHGYQALY--KRKTNEVYNGNI 342
            +RR  LL EI G+ ADI+CLQE+    +  FF  +L  + Y+ +Y  K +   +     
Sbjct: 414 EFRRDLLLNEIRGHDADIVCLQEIDQGSYHGFFREQLAYNDYKGVYWPKGRAQGMPEEEA 473

Query: 343 QTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLTDPATILTAQKRNALNRL-IKDDVALIV 402
           + +DGCATFF+  ++  ++K  + F + A    D        + +  NRL  KD++A+IV
Sbjct: 474 KLVDGCATFFKGSKYILLEKNMIHFGQTAVRRPD-----AKGQDDIYNRLWQKDNIAVIV 533

Query: 403 VLESKFSTPTVDNPGKRQLVCVANTHINGNQDLKDVKLWQVHTLLKGLEKIA-------- 462
            LE++ +       G+R  + V N HI  +   KDVKL QV  +++ + ++A        
Sbjct: 534 FLENRLT-------GER--LIVVNAHIYWDPAYKDVKLIQVAIMMEEVTQLAEKYVKIPP 593

Query: 463 ----------------------------------VSADIPMLVCGDFNSVPGSAPHHLLA 522
                                              ++ IP+LVCGDFNS PGSA ++LLA
Sbjct: 594 CTDKTAFRFSEPEDGKESQGTSTPVEPAPSVEYSSASQIPILVCGDFNSCPGSAVYNLLA 653

Query: 523 RGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNE 582
            G++   HPDL    L        +SH   L SAYS                    T  E
Sbjct: 654 HGRMAEEHPDLE-QRLYGNLSRMGMSHPFTLKSAYS--------------------TIGE 713

Query: 583 PLFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEF 602
             FTN T  F   +DYI+Y+++TL V +LL  +D+E L++    P+  + SDH AL+AEF
Sbjct: 714 LSFTNYTPGFTDVIDYIWYSSNTLQVTALLGEVDKEYLKRVPGFPNYHFPSDHLALMAEF 744

[Close]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot
Match: Q4P9T3 (CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=CCR4 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.6e-48
Identity = 130/413 (31.48%), Postives = 203/413 (49.15%), Query Frame = 0


Query: 217 PAPSPTP-RHLIPVNGVDTMGKMDLDGRV--PSSGTFTVLSYNILADVYATSETFSYCPS 276
           P P P P R  I ++    +  +D D      +  +F VLSYNIL D YAT++ + Y PS
Sbjct: 270 PVPLPPPEREWIMID--PDLPDLDADKHANDATQESFNVLSYNILFDRYATAQMYGYTPS 329

Query: 277 WALSWPYRRQNLLREIVGYRADIICLQEVQSDHFLEFFAPELDKHGYQALY--KRKTNEV 336
           WAL+W YR++ +L+E++ Y ADI CLQEV  + + ++F   L +  Y+ ++  K +   +
Sbjct: 330 WALAWDYRKEFILQEVMSYSADICCLQEVGVEQYEDYFLHHLSQQDYEGVFYPKSRARTM 389

Query: 337 YNGNIQTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLTDPATILTAQKRNALNRLI-KDD 396
            +   + +DGCA F++ +++  ++K  VEFN+ A    D       +  +  NR++ KD+
Sbjct: 390 RDDERRRVDGCAIFYKSNKYQLIEKQLVEFNQIALQRPD-----FKKSEDMYNRVMTKDN 449

Query: 397 VALIVVLESKFSTPTVDNPGKRQLVCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAV-- 456
           +A+I +LE+K S       G R  + VAN H + +   +DVKL QV  L+  +EK     
Sbjct: 450 IAVIALLENKLS-------GSR--IVVANVHTHWDPAFRDVKLVQVAMLMDEVEKAGARF 509

Query: 457 ---------------------SADIPMLVCGDFNSVPGSAPHHLLARGKVEPTHPDLAVD 516
                                +  IP ++CGDFNSVP +  +  LA G V   H D  +D
Sbjct: 510 AKLPPKPSVAEGYPPPPKYTHANQIPTIICGDFNSVPETGVYDFLANGAVPGDHEDF-MD 569

Query: 517 SLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCTRDFIGTL 576
            +        L H   L S+Y                        E  FTN T  + G +
Sbjct: 570 HVYGNYTAQGLQHSYKLESSY--------------------VPIGELPFTNYTPGYEGAI 629

Query: 577 DYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 601
           DYIFYT +TL+V  +L  +D++ L K    P+  + SDH  +++EF  K   R
Sbjct: 630 DYIFYTKNTLSVTGVLGEIDKQYLSKVVGFPNAHFPSDHICIMSEFNVKRSDR 645

[Close]

BLAST of Carg16260-RA vs. ExPASy TrEMBL
Match: A0A6J1FEV7 (carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444853 PE=4 SV=1)

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 600/601 (99.83%), Postives = 600/601 (99.83%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVD MGKMDL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDMMGKMDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. ExPASy TrEMBL
Match: A0A6J1KY73 (carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498636 PE=4 SV=1)

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 599/601 (99.67%), Postives = 600/601 (99.83%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK
Sbjct: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180
           NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP
Sbjct: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGVETWLEVGRCKSYTP 180

Query: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKMDL 240
           TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGK+DL
Sbjct: 181 TAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKIDL 240

Query: 241 DGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300
           DGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ
Sbjct: 241 DGRVSSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQ 300

Query: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360
           EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE
Sbjct: 301 EVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVE 360

Query: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420
           FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT
Sbjct: 361 FNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANT 420

Query: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480
           HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT
Sbjct: 421 HINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVEPT 480

Query: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540
           HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT
Sbjct: 481 HPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCT 540

Query: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600
           RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR
Sbjct: 541 RDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSRSR 600

Query: 601 R 602
           R
Sbjct: 601 R 601

[Close]

BLAST of Carg16260-RA vs. ExPASy TrEMBL
Match: A0A6J1DCZ0 (carbon catabolite repressor protein 4 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111019342 PE=4 SV=1)

HSP 1 Score: 1144.0 bits (2958), Expect = 0.0e+00
Identity = 568/607 (93.57%), Postives = 578/607 (95.22%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+VVRVHLPSDIPIVGCELTPYVLHRRPDKNI+TDDVSESA L GQFLRYRWYRLQSDK
Sbjct: 1   MLSVVRVHLPSDIPIVGCELTPYVLHRRPDKNINTDDVSESAPLDGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNEN 
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENG 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSS------SMLNGSTTLYPAAVTQKTGVETWLEVGR 180
           NEEEELFGR+NNN+ +  GAIN SSS      S+ NGST LYP AVTQKTGVETWLEVGR
Sbjct: 121 NEEEELFGRYNNNSTS--GAINSSSSSSTLSTSLTNGSTPLYPTAVTQKTGVETWLEVGR 180

Query: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDT 240
           CKSYTPTAEDIGHVLKFECAVVDVETML VASPLTV TSRVIPAPS +PR LIPVNGVD 
Sbjct: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLPVASPLTVLTSRVIPAPSASPRRLIPVNGVDV 240

Query: 241 MGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300
           MGKMDLDGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA
Sbjct: 241 MGKMDLDGRVSSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300

Query: 301 DIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360
           DIICLQEVQSDHF+EFFAPE DKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV
Sbjct: 301 DIICLQEVQSDHFVEFFAPEFDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360

Query: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420
           KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL
Sbjct: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420

Query: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480
           VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNS+PGSAPHHLLAR
Sbjct: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSIPGSAPHHLLAR 480

Query: 481 GKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEP 540
           GKVEPTHPDLAVD LNLCQPHSKLSHQLPLVSAYS FAIKGVG   DKQRKRLDPTTNEP
Sbjct: 481 GKVEPTHPDLAVDPLNLCQPHSKLSHQLPLVSAYSSFAIKGVGISLDKQRKRLDPTTNEP 540

Query: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFR 600
           LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP+WSSDH ALLAEFR
Sbjct: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPVWSSDHIALLAEFR 600

Query: 601 CKSRSRR 602
           CKSRSRR
Sbjct: 601 CKSRSRR 605

[Close]

BLAST of Carg16260-RA vs. ExPASy TrEMBL
Match: A0A6J1IXT3 (carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481600 PE=4 SV=1)

HSP 1 Score: 1134.0 bits (2932), Expect = 0.0e+00
Identity = 565/607 (93.08%), Postives = 579/607 (95.39%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+VVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESA + GQFLRYRWYRLQSDK
Sbjct: 1   MLSVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAPIDGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAAS+MNEN 
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASSMNENG 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSS------SMLNGSTTLYPAAVTQKTGVETWLEVGR 180
           NEEEELFGR+NNNN+A+ G IN SSS      S+ NG T LYPAAVTQKTGVETWLEVGR
Sbjct: 121 NEEEELFGRYNNNNSAS-GVINSSSSSSTISTSLTNGLTPLYPAAVTQKTGVETWLEVGR 180

Query: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDT 240
            KSYTPTAEDIGHVLKFECAVVD+ETML VASPLTV TSRVIPAPS +PR LIPVNGVD 
Sbjct: 181 YKSYTPTAEDIGHVLKFECAVVDMETMLPVASPLTVLTSRVIPAPSASPRCLIPVNGVDV 240

Query: 241 MGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300
           MGK+DLDGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA
Sbjct: 241 MGKLDLDGRV-SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300

Query: 301 DIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360
           DIICLQEVQSDHF+EFFAPELDKHGYQALYKRKTNE+YNGNIQTIDGCATFFRRDRFAHV
Sbjct: 301 DIICLQEVQSDHFMEFFAPELDKHGYQALYKRKTNELYNGNIQTIDGCATFFRRDRFAHV 360

Query: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420
           KKYEVEFNKAAQSLTDPATILTAQKRNA+NRLIKDDVALIVVLESKFSTPTVDNPGKRQL
Sbjct: 361 KKYEVEFNKAAQSLTDPATILTAQKRNAINRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420

Query: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480
           VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR
Sbjct: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480

Query: 481 GKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEP 540
           GKVEPTHPDLAVD LNLCQPHSKLSHQLPLVSAYS FAIKGVG G DKQRKRLDPTTNEP
Sbjct: 481 GKVEPTHPDLAVDPLNLCQPHSKLSHQLPLVSAYSSFAIKGVGIGLDKQRKRLDPTTNEP 540

Query: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFR 600
           LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP+WSSDH ALLAEFR
Sbjct: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPVWSSDHIALLAEFR 600

Query: 601 CKSRSRR 602
           CKSR RR
Sbjct: 601 CKSRPRR 605

[Close]

BLAST of Carg16260-RA vs. ExPASy TrEMBL
Match: A0A6J1F264 (carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441499 PE=4 SV=1)

HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 564/607 (92.92%), Postives = 578/607 (95.22%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+VVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESA + GQFLRYRWYRLQSDK
Sbjct: 1   MLSVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAPIDGQFLRYRWYRLQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNEN 
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENG 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSS------SMLNGSTTLYPAAVTQKTGVETWLEVGR 180
           NEEEELFGR+NNNN+A+ G IN SSS      S+ NG T LYPAAVTQKTGVETWLEVGR
Sbjct: 121 NEEEELFGRYNNNNSAS-GVINSSSSSSTISTSLTNGLTPLYPAAVTQKTGVETWLEVGR 180

Query: 181 CKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDT 240
            KSYTPTAEDIGHVLKFECAVVD+ET L VASPLTV TSRVIPAPS +PR LIPVNGVD 
Sbjct: 181 YKSYTPTAEDIGHVLKFECAVVDMETTLPVASPLTVLTSRVIPAPSASPRCLIPVNGVDV 240

Query: 241 MGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300
           MGK+DLDGRV SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA
Sbjct: 241 MGKLDLDGRV-SSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRA 300

Query: 301 DIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHV 360
           DIICLQEVQSDHF+EFFAPELDKHGYQALYKRKTNE+YNGNIQTIDGCATFFRRDRFAHV
Sbjct: 301 DIICLQEVQSDHFMEFFAPELDKHGYQALYKRKTNELYNGNIQTIDGCATFFRRDRFAHV 360

Query: 361 KKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420
           KKYEVEFNKAAQSLTDPATILTAQKRNA+NRLIKDDVALIVVLESKFSTPTVDNPGKRQL
Sbjct: 361 KKYEVEFNKAAQSLTDPATILTAQKRNAINRLIKDDVALIVVLESKFSTPTVDNPGKRQL 420

Query: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480
           VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR
Sbjct: 421 VCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLAR 480

Query: 481 GKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEP 540
           GKVEPTHPDLA+D LNLCQPHSKLSHQLPLVSAYS FAIKGVG G DKQRKRLDPTTNEP
Sbjct: 481 GKVEPTHPDLAIDPLNLCQPHSKLSHQLPLVSAYSSFAIKGVGIGLDKQRKRLDPTTNEP 540

Query: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFR 600
           LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP+WSSDH ALLAEFR
Sbjct: 541 LFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPVWSSDHIALLAEFR 600

Query: 601 CKSRSRR 602
           CKSR RR
Sbjct: 601 CKSRPRR 605

[Close]

BLAST of Carg16260-RA vs. TAIR 10
Match: AT3G58560.1 (DNAse I-like superfamily protein )

HSP 1 Score: 885.9 bits (2288), Expect = 1.8e-257
Identity = 438/603 (72.64%), Postives = 507/603 (84.08%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+V+RVHLPS+IPIVGCELTPYVL RRPDK  STDDV ESA L G FL+YRW+R+QSDK
Sbjct: 1   MLSVIRVHLPSEIPIVGCELTPYVLLRRPDKTPSTDDVPESAPLEGHFLKYRWFRVQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KVA+CSVHPSE ATLQCLGC+K+K+P  KSYHC+TKCFSD+WQHHRVLH+RAASA  E  
Sbjct: 61  KVAICSVHPSETATLQCLGCLKSKVPVAKSYHCSTKCFSDAWQHHRVLHERAASAATE-G 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSMLNGSTTLYPAAVTQKTGV--ETWLEVGRCKSY 180
           N+EEEL      N++ +   +  +S S+ NGS+++YP+A+TQKTG   ET +EVGR K+Y
Sbjct: 121 NDEEEL---PRLNSSGSGSGVLSTSVSLTNGSSSVYPSAITQKTGAGGETLVEVGRSKTY 180

Query: 181 TPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVDTMGKM 240
           TP A+DI HVLKFEC VV+ ET  +V    T+ TSRVIPAPSP+PR LI ++G D  G +
Sbjct: 181 TPMADDICHVLKFECVVVNAETKQNVGLSCTILTSRVIPAPSPSPRRLISISGTDVTGHL 240

Query: 241 DLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIIC 300
           D +GR  S GTFTVLSYNIL+D YA+S+ +SYCP+WAL+W YRRQNLLREIV YRADI+C
Sbjct: 241 DSNGRPLSMGTFTVLSYNILSDTYASSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVC 300

Query: 301 LQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYE 360
           LQEVQ+DHF EFF PELDKHGYQ L+KRKTNEV+ GN  TIDGCATFFRRDRF+HVKKYE
Sbjct: 301 LQEVQNDHFEEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYE 360

Query: 361 VEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVA 420
           VEFNKAAQSLT+ A I  +QK+NALNRL+KD+VALIVVLE+KF +   DNPGKRQL+CVA
Sbjct: 361 VEFNKAAQSLTE-AIIPVSQKKNALNRLVKDNVALIVVLEAKFGSQAADNPGKRQLLCVA 420

Query: 421 NTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLARGKVE 480
           NTH+N   +LKDVKLWQVHTLLKGLEKIA SADIPMLVCGDFN+VP SAPH LLA GKV+
Sbjct: 421 NTHVNVPHELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTVPASAPHTLLAVGKVD 480

Query: 481 PTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTN 540
           P HPDL VD L + +PHSKL+HQLPLVSAYS FA  G    +++QR+RLDP ++EPLFTN
Sbjct: 481 PLHPDLMVDPLGILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASSEPLFTN 540

Query: 541 CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCKSR 600
           CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSP WSSDH ALLAEFRC  R
Sbjct: 541 CTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCMPR 598

Query: 601 SRR 602
           +RR
Sbjct: 601 ARR 598

[Close]

BLAST of Carg16260-RA vs. TAIR 10
Match: AT3G58580.1 (DNAse I-like superfamily protein )

HSP 1 Score: 870.9 bits (2249), Expect = 5.8e-253
Identity = 431/609 (70.77%), Postives = 496/609 (81.44%), Query Frame = 0


Query: 1   MLNVVRVHLPSDIPIVGCELTPYVLHRRPDKNISTDDVSESAALGGQFLRYRWYRLQSDK 60
           ML+V+RVHLPS+IPIVGCELTPYVL RRPDKN +TDDV ESA L G FLRYRWYR+QSDK
Sbjct: 1   MLSVIRVHLPSEIPIVGCELTPYVLVRRPDKNSTTDDVPESAPLEGYFLRYRWYRVQSDK 60

Query: 61  KVAVCSVHPSEQATLQCLGCVKAKIPAFKSYHCTTKCFSDSWQHHRVLHDRAASAMNENS 120
           KV +CSVHP+EQATLQC+ C K +    KSYHC+ KCF+D+WQHHR LH+RAA+    N+
Sbjct: 61  KVTICSVHPTEQATLQCVFCSKRRSLVPKSYHCSPKCFTDAWQHHRTLHERAAA--ENNA 120

Query: 121 NEEEELFGRHNNNNNAAPGAINPSSSSML-------NGSTTLYPAAVTQKTGVETWLEVG 180
           NE+++L    N NN+A  G++  S S  +       NG    YP+ +TQK G ET +EVG
Sbjct: 121 NEDDDL----NRNNSAGSGSLAGSLSGSMSNLSIANNGPAPFYPSNITQKNGGETLVEVG 180

Query: 181 RCKSYTPTAEDIGHVLKFECAVVDVETMLSVASPLTVSTSRVIPAPSPTPRHLIPVNGVD 240
            CK+YTPTA+DI HVLKFEC V + ET   V  P T+ TSRVIPAPSP+PR LIPVNG D
Sbjct: 181 GCKTYTPTADDISHVLKFECVVANAETKQIVGHPSTILTSRVIPAPSPSPRKLIPVNGAD 240

Query: 241 TMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYR 300
            MG +D D R+ S+G+FTVLSYNIL+D  A+S+ +SYCP WALSWPYRRQNLLREIVGYR
Sbjct: 241 GMGHLDQDARIQSAGSFTVLSYNILSDTSASSDLYSYCPPWALSWPYRRQNLLREIVGYR 300

Query: 301 ADIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAH 360
           AD++CLQEVQSDHF E FAPELDKHGYQALYKRKTNEV +G+   IDGCATFFRRDRF+H
Sbjct: 301 ADVVCLQEVQSDHFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSH 360

Query: 361 VKKYEVEFNKAAQSLTDPATILTAQKRNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQ 420
           VKKY+VEFNKAAQSLTD A I  AQKR ALNRL+KD++ALIVVLE+KF     D  GKRQ
Sbjct: 361 VKKYDVEFNKAAQSLTD-ALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGKRQ 420

Query: 421 LVCVANTHINGNQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHHLLA 480
           L+CVANTH+N  QDLKDVKLWQVHTLLKGLEKIA SADIPMLVCGDFN++PGSAPH LL 
Sbjct: 421 LICVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTLPGSAPHTLLV 480

Query: 481 RGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGV-GNGSDKQRKRLDPTTN 540
            GKV+P HPDLAVD LN+ +PH+KL+HQLPLVSAYS F  KG+ G G ++ R+R+D  TN
Sbjct: 481 MGKVDPMHPDLAVDPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGLEQHRRRIDLNTN 540

Query: 541 EPLFTNCTRDFIGTLDYIFYTADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAE 600
           EPLFTNCTRDFIGT DYIFYTADTL VESLLELLDE+ LRKDTALPSP WSS+H ALLAE
Sbjct: 541 EPLFTNCTRDFIGTHDYIFYTADTLMVESLLELLDEDGLRKDTALPSPEWSSNHIALLAE 600

Query: 601 FRCKSRSRR 602
           FRC  R+RR
Sbjct: 601 FRCTPRTRR 602

[Close]

BLAST of Carg16260-RA vs. TAIR 10
Match: AT1G31500.1 (DNAse I-like superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 5.4e-33
Identity = 118/404 (29.21%), Postives = 170/404 (42.08%), Query Frame = 0


Query: 217 PAPSPTPRHLIPVNGVDTMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWAL 276
           PA  P  R    V GVD   +   DG       F ++SYNILA VY  S    + P   L
Sbjct: 35  PAIEPKVRKFESVEGVDIGSRNKSDGI-----RFRLVSYNILAQVYVKSALLPHSPPACL 94

Query: 277 SWPYRRQNLLREIVGYRADIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNI 336
            W  R   +L  +   +AD  CLQEV  D +  F+   +D  GY  +Y ++T +      
Sbjct: 95  KWKARSHAILSVLKNLQADFFCLQEV--DEYDSFYRNNMDSLGYSGIYIQRTGQ------ 154

Query: 337 QTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLTDPATILTAQK----------------- 396
           +  DGCA F++      V K  +E+N    S+   +   + QK                 
Sbjct: 155 RKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKDSRKDSRDL 214

Query: 397 RNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANTHINGNQDLKDVKLWQVHTL 456
            + L RL +D V ++             N   + +V VANTH+  + +L DVKL Q   L
Sbjct: 215 NDPLVRLKRDCVGIMAAFRI--------NKPFQHIVIVANTHLYWDPELADVKLAQAKYL 274

Query: 457 LKGLE--KIAVSADI----PMLVCGDFNSVPGSAPHHLLARGKVEPTHPDLAVDSLNLCQ 516
           L  L   K  +S +      +L+ GDFNS+PG   +  L  G  +PT            +
Sbjct: 275 LSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPT------------E 334

Query: 517 PHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCTRDFIGTLDYIFYT 576
              +    +PL S Y                   + T  EP FTNCT  F  TLDYIF +
Sbjct: 335 TIEEEEAPVPLSSVY-------------------EVTRGEPKFTNCTPGFTNTLDYIFIS 386

Query: 577 -ADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCK 597
            +D +   S+L+L + +S      LP+    SDH  + AEF  +
Sbjct: 395 PSDFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEIR 386

[Close]

BLAST of Carg16260-RA vs. TAIR 10
Match: AT1G31500.2 (DNAse I-like superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 5.4e-33
Identity = 118/404 (29.21%), Postives = 170/404 (42.08%), Query Frame = 0


Query: 217 PAPSPTPRHLIPVNGVDTMGKMDLDGRVPSSGTFTVLSYNILADVYATSETFSYCPSWAL 276
           PA  P  R    V GVD   +   DG       F ++SYNILA VY  S    + P   L
Sbjct: 5   PAIEPKVRKFESVEGVDIGSRNKSDGI-----RFRLVSYNILAQVYVKSALLPHSPPACL 64

Query: 277 SWPYRRQNLLREIVGYRADIICLQEVQSDHFLEFFAPELDKHGYQALYKRKTNEVYNGNI 336
            W  R   +L  +   +AD  CLQEV  D +  F+   +D  GY  +Y ++T +      
Sbjct: 65  KWKARSHAILSVLKNLQADFFCLQEV--DEYDSFYRNNMDSLGYSGIYIQRTGQ------ 124

Query: 337 QTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLTDPATILTAQK----------------- 396
           +  DGCA F++      V K  +E+N    S+   +   + QK                 
Sbjct: 125 RKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKDSRKDSRDL 184

Query: 397 RNALNRLIKDDVALIVVLESKFSTPTVDNPGKRQLVCVANTHINGNQDLKDVKLWQVHTL 456
            + L RL +D V ++             N   + +V VANTH+  + +L DVKL Q   L
Sbjct: 185 NDPLVRLKRDCVGIMAAFRI--------NKPFQHIVIVANTHLYWDPELADVKLAQAKYL 244

Query: 457 LKGLE--KIAVSADI----PMLVCGDFNSVPGSAPHHLLARGKVEPTHPDLAVDSLNLCQ 516
           L  L   K  +S +      +L+ GDFNS+PG   +  L  G  +PT            +
Sbjct: 245 LSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYLVSGNAKPT------------E 304

Query: 517 PHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKRLDPTTNEPLFTNCTRDFIGTLDYIFYT 576
              +    +PL S Y                   + T  EP FTNCT  F  TLDYIF +
Sbjct: 305 TIEEEEAPVPLSSVY-------------------EVTRGEPKFTNCTPGFTNTLDYIFIS 356

Query: 577 -ADTLTVESLLELLDEESLRKDTALPSPIWSSDHTALLAEFRCK 597
            +D +   S+L+L + +S      LP+    SDH  + AEF  +
Sbjct: 365 PSDFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEIR 356

[Close]

BLAST of Carg16260-RA vs. TAIR 10
Match: AT1G31500.4 (DNAse I-like superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 3.9e-31
Identity = 108/371 (29.11%), Postives = 159/371 (42.86%), Query Frame = 0


Query: 250 FTVLSYNILADVYATSETFSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHFLE 309
           F ++SYNILA VY  S    + P   L W  R   +L  +   +AD  CLQEV  D +  
Sbjct: 92  FRLVSYNILAQVYVKSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEV--DEYDS 151

Query: 310 FFAPELDKHGYQALYKRKTNEVYNGNIQTIDGCATFFRRDRFAHVKKYEVEFNKAAQSLT 369
           F+   +D  GY  +Y ++T +      +  DGCA F++      V K  +E+N    S+ 
Sbjct: 152 FYRNNMDSLGYSGIYIQRTGQ------RKRDGCAIFYKPSCAELVTKERIEYNDLVDSIK 211

Query: 370 DPATILTAQK-----------------RNALNRLIKDDVALIVVLESKFSTPTVDNPGKR 429
             +   + QK                  + L RL +D V ++             N   +
Sbjct: 212 ADSVSCSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRI--------NKPFQ 271

Query: 430 QLVCVANTHINGNQDLKDVKLWQVHTLLKGLE--KIAVSADI----PMLVCGDFNSVPGS 489
            +V VANTH+  + +L DVKL Q   LL  L   K  +S +      +L+ GDFNS+PG 
Sbjct: 272 HIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGD 331

Query: 490 APHHLLARGKVEPTHPDLAVDSLNLCQPHSKLSHQLPLVSAYSYFAIKGVGNGSDKQRKR 549
             +  L  G  +PT            +   +    +PL S Y                  
Sbjct: 332 MVYSYLVSGNAKPT------------ETIEEEEAPVPLSSVY------------------ 391

Query: 550 LDPTTNEPLFTNCTRDFIGTLDYIFYT-ADTLTVESLLELLDEESLRKDTALPSPIWSSD 597
            + T  EP FTNCT  F  TLDYIF + +D +   S+L+L + +S      LP+    SD
Sbjct: 392 -EVTRGEPKFTNCTPGFTNTLDYIFISPSDFIKPVSILQLPEPDSPDVVGFLPNHHHPSD 415

The following BLAST results are available for this feature:

BLAST of Carg16260-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596662.1	0.0e+00	100.00	Carbon catabolite repressor protein 4-like 1, partial [Cucurbita argyrosperma su...	[more]
XP_022938709.1	0.0e+00	99.83	carbon catabolite repressor protein 4 homolog 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023539808.1	0.0e+00	99.67	carbon catabolite repressor protein 4 homolog 1-like [Cucurbita pepo subsp. pepo...	[more]
XP_023005723.1	0.0e+00	99.67	carbon catabolite repressor protein 4 homolog 1-like [Cucurbita maxima] >XP_0230...	[more]
XP_022151398.1	0.0e+00	93.57	carbon catabolite repressor protein 4 homolog 1-like [Momordica charantia] >XP_0...	[more]

BLAST of Carg16260-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W0Z9	2.5e-256	72.64	Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M2F8	8.2e-252	70.77	Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana OX=3702 ...	[more]
O74874	4.0e-49	33.51	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Schizosaccharomyces pombe...	[more]
Q1EA11	2.0e-48	32.71	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Coccidioides immitis (str...	[more]
Q4P9T3	7.6e-48	31.48	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Ustilago maydis (strain 5...	[more]

BLAST of Carg16260-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEV7	0.0e+00	99.83	carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KY73	0.0e+00	99.67	carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1DCZ0	0.0e+00	93.57	carbon catabolite repressor protein 4 homolog 1-like OS=Momordica charantia OX=3...	[more]
A0A6J1IXT3	0.0e+00	93.08	carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1F264	0.0e+00	92.92	carbon catabolite repressor protein 4 homolog 1-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Carg16260-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58560.1	1.8e-257	72.64	DNAse I-like superfamily protein	[more]
AT3G58580.1	5.8e-253	70.77	DNAse I-like superfamily protein	[more]
AT1G31500.1	5.4e-33	29.21	DNAse I-like superfamily protein	[more]
AT1G31500.2	5.4e-33	29.21	DNAse I-like superfamily protein	[more]
AT1G31500.4	3.9e-31	29.11	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 253..586 e-value: 5.6E-29 score: 101.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 221..601 e-value: 5.6E-112 score: 376.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 245..597
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..144
None	No IPR available	PANTHER	PTHR12121:SF83	CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE	coord: 34..598
None	No IPR available	PANTHER	PTHR12121	CARBON CATABOLITE REPRESSOR PROTEIN 4	coord: 34..598
None	No IPR available	CDD	cd09097	Deadenylase_CCR4	coord: 252..595 e-value: 1.72423E-157 score: 452.528

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16260	Carg16260	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16260-RA:13	Carg16260-RA:13	exon
Carg16260-RA:12	Carg16260-RA:12	exon
Carg16260-RA:11	Carg16260-RA:11	exon
Carg16260-RA:10	Carg16260-RA:10	exon
Carg16260-RA:9	Carg16260-RA:9	exon
Carg16260-RA:8	Carg16260-RA:8	exon
Carg16260-RA:7	Carg16260-RA:7	exon
Carg16260-RA:6	Carg16260-RA:6	exon
Carg16260-RA:5	Carg16260-RA:5	exon
Carg16260-RA:4	Carg16260-RA:4	exon
Carg16260-RA:3	Carg16260-RA:3	exon
Carg16260-RA:2	Carg16260-RA:2	exon
Carg16260-RA:1	Carg16260-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16260-RA:three_prime_utr	Carg16260-RA:three_prime_utr_3	three_prime_UTR
Carg16260-RA:three_prime_utr	Carg16260-RA:three_prime_utr_2	three_prime_UTR
Carg16260-RA:three_prime_utr	Carg16260-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16260-RA:cds	Carg16260-RA:cds_11	CDS
Carg16260-RA:cds	Carg16260-RA:cds_10	CDS
Carg16260-RA:cds	Carg16260-RA:cds_9	CDS
Carg16260-RA:cds	Carg16260-RA:cds_8	CDS
Carg16260-RA:cds	Carg16260-RA:cds_7	CDS
Carg16260-RA:cds	Carg16260-RA:cds_6	CDS
Carg16260-RA:cds	Carg16260-RA:cds_5	CDS
Carg16260-RA:cds	Carg16260-RA:cds_4	CDS
Carg16260-RA:cds	Carg16260-RA:cds_3	CDS
Carg16260-RA:cds	Carg16260-RA:cds_2	CDS
Carg16260-RA:cds	Carg16260-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16260-RA:five_prime_utr	Carg16260-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16260-RA	Carg16260-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity