Carg16004-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16004-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Phosphoglycerate kinase
Location	Carg_Chr07: 2373540 .. 2375523 (+)
Sequence length	1473
RNA-Seq Expression	Carg16004-RA
Synteny	Carg16004-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCGAAGATAACATTGGTGATGAGTTACACCACAATCGTCCGGCTCTTGGAAACCTAACCAATCGTCCGTTTAAGCGAAAAATCTCGTCAATTTTAAGTGATTCAGGGGTTAAATCTAGGGATGGTTGCGGCAAAAATGTGGACGGGAAATACGGAGAACCCAAATTCCCGAAGCATGTGCGTTTACAAGCTGCCAAATATGTCAAGGAGAACTGTAAACGTTCGTGTGGAAAATTCTGTTATACAATGGCTCTTTCTAGGTTTAGTAAGGAGCAGGAATCTGAATGCTGTCCTGCTTCCAGCGAAGTTGAAGCTGCTTTGTCTGATGTACCTATGGAAATTGTGCAGTGTGATTTGTTGAACGATGGAGTACATCCTGTGCAAGATGATAAAGAAAGAATTACTGACGGTGAAACACTGGAAGTTCCTTGCTTGCCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGTAGTTCCTCCTTGCTTCCCCATCTCTGTAGTCCCTACTTACCCTGAGGATGACAAGAAAAATTGCCCTGGAATCATGCAAAACAGTGCTGACAATGAAGAAGCAGTTGATCATGTTTCAAGGAATGGCAAAAAGGATATTGAATTTGGTAAAATTGGCTCAAGCGACCATGATTGCACGGAGTTGATGAGATTACCTATGTCAGGGGATCCCAAGTCTCTGGCACTGGAAAGGTGCTCCGGACTTAAGAATGATGGTTGTGCTAATTTAGACATTGACGACTTGTTTGAAACATGTTCTTGTTCATTCTGCATGAAAGGTAAGTAGAATGTAATTTATTTGTTATGTCTATAATTAGAGGTTTTTGAAAATTCATGCCAAGAAAAGGCTAAATTAGTCTGCTTTTGTAATCAGCATCATACATTTGGTCAGACCTTCATTACCAGGACATTAAGGGACGGATTTCAGGTAAACTTGTTCTTCCTTGTATAGTAATAACACCTGCCTTTTGGGTTATACCCTCCTATAGCTAATCATGATATTTTCATTCTTTAGCACTTAAGAAAAGCCAGAAAGATGCAAGCATCTTGGCTCAGAAATGCAGCAAAGAGAAAGAGACTTATCATGATCAAGGAAATTCTTCCAAATCAAAGCTAGAATTTGATCTTTGGGGTCAGTGGATGTCACTATTCCGTCATATGGAAGATACGTTTTCTCAAGAAGGCAGCCAACTTGTAAGTGTAAATTCTTTGTACTTGTTCCCATTAGAAATGTGCGTTTACATTTGAACTGTGATCTTTTCAATTAACCTGTCCATGAAAAAATGAAATTATTATTATTTCCTTAAAATAACCAATTGAAGGAAGAGGGACTGTGTCAGAAGCCTAAAAGAGCTTAATTAATTAAAGCAATTACAATTTTCTGGCATTGTTAGTATGGAGGGATTCACTAGCATAGGTTCAGTATACTCTTTTAGATTCTTGAATATTTACTTCACCATTTCCATTTACTTGAACCTTGGAAAAAGACTAACTGTGGTAAATCTTTCTTTTCTTCTATATAGCAAACCAGTTTTGTTACCCTAAAAGATCTGAGGGAGGAATGCAAGATGAATCTGGAGATGCTTAATGGCATGCCTATGGAGAAGCACTAGGGTGTTGATTTCTTTTTTTACCTGACATTCTGGTGGTTGTGGGCCGTGTGGTTAGTCACTAATGCTGTCCATATTTGTGCTTTTGAACTTCTCGCTATGGATAGGGTAGCTGTATTAGAAAATTTGGAATGCATGTAAAATAATCCAATTCTGTTGCTGAATAACCCTATCTTCATCTTTGCTTCTCGGCTTTCATGTATATTTTTAGCTACTTGAACGATTTTTTGTAGTTTAGTTTAGTAGCTTACCAGATCTTGCTGAATTAGGTGATATGATAAATGATTTAGGGTTGACATCTTAAAAATAGAAAGAATATCATATTATCAAATC

mRNA sequence

ATGCGCGAAGATAACATTGGTGATGAGTTACACCACAATCGTCCGGCTCTTGGAAACCTAACCAATCGTCCGTTTAAGCGAAAAATCTCGTCAATTTTAAGTGATTCAGGGGTTAAATCTAGGGATGGTTGCGGCAAAAATGTGGACGGGAAATACGGAGAACCCAAATTCCCGAAGCATGTGCGTTTACAAGCTGCCAAATATGTCAAGGAGAACTGTAAACGTTCGTGTGGAAAATTCTGTTATACAATGGCTCTTTCTAGGTTTAGTAAGGAGCAGGAATCTGAATGCTGTCCTGCTTCCAGCGAAGTTGAAGCTGCTTTGTCTGATGTACCTATGGAAATTGTGCAGTGTGATTTGTTGAACGATGGAGTACATCCTGTGCAAGATGATAAAGAAAGAATTACTGACGGTGAAACACTGGAAGTTCCTTGCTTGCCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGTAGTTCCTCCTTGCTTCCCCATCTCTGTAGTCCCTACTTACCCTGAGGATGACAAGAAAAATTGCCCTGGAATCATGCAAAACAGTGCTGACAATGAAGAAGCAGTTGATCATGTTTCAAGGAATGGCAAAAAGGATATTGAATTTGGTAAAATTGGCTCAAGCGACCATGATTGCACGGAGTTGATGAGATTACCTATGTCAGGGGATCCCAAGTCTCTGGCACTGGAAAGGTGCTCCGGACTTAAGAATGATGGTTGTGCTAATTTAGACATTGACGACTTGTTTGAAACATGTTCTTGTTCATTCTGCATGAAAGCATCATACATTTGGTCAGACCTTCATTACCAGGACATTAAGGGACGGATTTCAGCACTTAAGAAAAGCCAGAAAGATGCAAGCATCTTGGCTCAGAAATGCAGCAAAGAGAAAGAGACTTATCATGATCAAGGAAATTCTTCCAAATCAAAGCTAGAATTTGATCTTTGGGGTCAGTGGATGTCACTATTCCGTCATATGGAAGATACGTTTTCTCAAGAAGGCAGCCAACTTCAAACCAGTTTTGTTACCCTAAAAGATCTGAGGGAGGAATGCAAGATGAATCTGGAGATGCTTAATGGCATGCCTATGGAGAAGCACTAGGGTGTTGATTTCTTTTTTTACCTGACATTCTGGTGGTTGTGGGCCGTGTGGTTAGTCACTAATGCTGTCCATATTTGTGCTTTTGAACTTCTCGCTATGGATAGGGTAGCTGTATTAGAAAATTTGGAATGCATGTAAAATAATCCAATTCTGTTGCTGAATAACCCTATCTTCATCTTTGCTTCTCGGCTTTCATGTATATTTTTAGCTACTTGAACGATTTTTTGTAGTTTAGTTTAGTAGCTTACCAGATCTTGCTGAATTAGGTGATATGATAAATGATTTAGGGTTGACATCTTAAAAATAGAAAGAATATCATATTATCAAATC

Coding sequence (CDS)

ATGCGCGAAGATAACATTGGTGATGAGTTACACCACAATCGTCCGGCTCTTGGAAACCTAACCAATCGTCCGTTTAAGCGAAAAATCTCGTCAATTTTAAGTGATTCAGGGGTTAAATCTAGGGATGGTTGCGGCAAAAATGTGGACGGGAAATACGGAGAACCCAAATTCCCGAAGCATGTGCGTTTACAAGCTGCCAAATATGTCAAGGAGAACTGTAAACGTTCGTGTGGAAAATTCTGTTATACAATGGCTCTTTCTAGGTTTAGTAAGGAGCAGGAATCTGAATGCTGTCCTGCTTCCAGCGAAGTTGAAGCTGCTTTGTCTGATGTACCTATGGAAATTGTGCAGTGTGATTTGTTGAACGATGGAGTACATCCTGTGCAAGATGATAAAGAAAGAATTACTGACGGTGAAACACTGGAAGTTCCTTGCTTGCCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGCAGTTCCTCCTTGCTTACCCATTTCTGTAGTTCCTCCTTGCTTCCCCATCTCTGTAGTCCCTACTTACCCTGAGGATGACAAGAAAAATTGCCCTGGAATCATGCAAAACAGTGCTGACAATGAAGAAGCAGTTGATCATGTTTCAAGGAATGGCAAAAAGGATATTGAATTTGGTAAAATTGGCTCAAGCGACCATGATTGCACGGAGTTGATGAGATTACCTATGTCAGGGGATCCCAAGTCTCTGGCACTGGAAAGGTGCTCCGGACTTAAGAATGATGGTTGTGCTAATTTAGACATTGACGACTTGTTTGAAACATGTTCTTGTTCATTCTGCATGAAAGCATCATACATTTGGTCAGACCTTCATTACCAGGACATTAAGGGACGGATTTCAGCACTTAAGAAAAGCCAGAAAGATGCAAGCATCTTGGCTCAGAAATGCAGCAAAGAGAAAGAGACTTATCATGATCAAGGAAATTCTTCCAAATCAAAGCTAGAATTTGATCTTTGGGGTCAGTGGATGTCACTATTCCGTCATATGGAAGATACGTTTTCTCAAGAAGGCAGCCAACTTCAAACCAGTTTTGTTACCCTAAAAGATCTGAGGGAGGAATGCAAGATGAATCTGGAGATGCTTAATGGCATGCCTATGGAGAAGCACTAG

Protein sequence

MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKHVRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDLLNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPTYPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKSLALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDASILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKDLREECKMNLEMLNGMPMEKH

Homology

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BLAST of Carg16004-RA vs. NCBI nr
Match: KAG7026834.1 (hypothetical protein SDJN02_10841, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 776.5 bits (2004), Expect = 1.0e-220
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH
Sbjct: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. NCBI nr
Match: KAG6594869.1 (hypothetical protein SDJN03_11422, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 775.4 bits (2001), Expect = 2.3e-220
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH
Sbjct: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. NCBI nr
Match: XP_022962720.1 (uncharacterized protein LOC111463126 [Cucurbita moschata])

HSP 1 Score: 770.4 bits (1988), Expect = 7.3e-219
Identity = 377/380 (99.21%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRP LGNLTNRPFKRKISSILSDS VKSRDGCGKNVDGKYGEPKFPKH
Sbjct: 1   MREDNIGDELHHNRPVLGNLTNRPFKRKISSILSDSVVKSRDGCGKNVDGKYGEPKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. NCBI nr
Match: XP_023518820.1 (uncharacterized protein LOC111782225 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 770.0 bits (1987), Expect = 9.5e-219
Identity = 377/380 (99.21%), Postives = 379/380 (99.74%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDG GKNVDGKYGEPKFPKH
Sbjct: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGYGKNVDGKYGEPKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGN+SKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNASKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. NCBI nr
Match: XP_023004026.1 (uncharacterized protein LOC111497458 [Cucurbita maxima])

HSP 1 Score: 758.1 bits (1956), Expect = 3.7e-215
Identity = 372/380 (97.89%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRPALGNLTN PFKRKISSILSDSGVKSRDGCGK VDGKYGE KFPKH
Sbjct: 1   MREDNIGDELHHNRPALGNLTNLPFKRKISSILSDSGVKSRDGCGKIVDGKYGESKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQ DL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQFDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDG HPVQDDK+RITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGAHPVQDDKQRITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQT+FVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTNFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. ExPASy TrEMBL
Match: A0A6J1HFW9 (uncharacterized protein LOC111463126 OS=Cucurbita moschata OX=3662 GN=LOC111463126 PE=4 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 3.5e-219
Identity = 377/380 (99.21%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRP LGNLTNRPFKRKISSILSDS VKSRDGCGKNVDGKYGEPKFPKH
Sbjct: 1   MREDNIGDELHHNRPVLGNLTNRPFKRKISSILSDSVVKSRDGCGKNVDGKYGEPKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. ExPASy TrEMBL
Match: A0A6J1KQY6 (uncharacterized protein LOC111497458 OS=Cucurbita maxima OX=3661 GN=LOC111497458 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 1.8e-215
Identity = 372/380 (97.89%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNIGDELHHNRPALGNLTN PFKRKISSILSDSGVKSRDGCGK VDGKYGE KFPKH
Sbjct: 1   MREDNIGDELHHNRPALGNLTNLPFKRKISSILSDSGVKSRDGCGKIVDGKYGESKFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
           VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQ DL
Sbjct: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQFDL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LNDG HPVQDDK+RITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT
Sbjct: 121 LNDGAHPVQDDKQRITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
           YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTEL+RLPMSGDPKS
Sbjct: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELLRLPMSGDPKS 240

Query: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300
           LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA
Sbjct: 241 LALERCSGLKNDGCANLDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDA 300

Query: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKD 360
           SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQT+FVTLKD
Sbjct: 301 SILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTNFVTLKD 360

Query: 361 LREECKMNLEMLNGMPMEKH 381
           LREECKMNLEMLNGMPMEKH
Sbjct: 361 LREECKMNLEMLNGMPMEKH 380

[Close]

BLAST of Carg16004-RA vs. ExPASy TrEMBL
Match: A0A6J1IQB8 (uncharacterized protein LOC111478471 OS=Cucurbita maxima OX=3661 GN=LOC111478471 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.4e-144
Identity = 272/383 (71.02%), Postives = 298/383 (77.81%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNI D   +NR ALGNLTNRP KRK+SSILSDSG+K+RDGCGK VDGK  E + PKH
Sbjct: 1   MREDNIDDVFGNNRSALGNLTNRPLKRKLSSILSDSGIKTRDGCGKTVDGKDEESRCPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQ-ESECCPASSEVEAALSDVPMEIVQCD 120
           VRLQAA+YVKENC+RSCG+ CY+M LSRFS EQ ES C PASSE + AL +   E VQC+
Sbjct: 61  VRLQAAEYVKENCERSCGENCYSMGLSRFSTEQLESACSPASSEGDTALFETAKETVQCN 120

Query: 121 LLNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVP 180
           L N   HP  +D+ RITD E L VPCLP S VP C                         
Sbjct: 121 LTNGEAHPEHEDEHRITDSEALGVPCLPTSVVPTC------------------------- 180

Query: 181 TYPEDDKKNCPGIMQNSADNE-EAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDP 240
             PEDDK++CPG M N+ADNE  AVDHVSRNG+KDI  GKIGSS+HD T+  RLP+SG  
Sbjct: 181 --PEDDKEDCPGFMINNADNEAAAVDHVSRNGEKDIGIGKIGSSNHDSTQWSRLPVSGGS 240

Query: 241 KSLALERCSGLKNDGCANLDI-DDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQ 300
           KSLALERCSG K D CANL + DDL +TCSCSFC+KASYIWSDLHYQDIKGRISALKKSQ
Sbjct: 241 KSLALERCSGFKTDNCANLGMYDDLLKTCSCSFCLKASYIWSDLHYQDIKGRISALKKSQ 300

Query: 301 KDASILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVT 360
           KDASILAQK SKEKETYHDQGNSSKSKLEFDL GQWMSLFRHMED F+ EGSQLQTSFVT
Sbjct: 301 KDASILAQKSSKEKETYHDQGNSSKSKLEFDLCGQWMSLFRHMEDMFAHEGSQLQTSFVT 356

Query: 361 LKDLREECKMNLEMLNGMPMEKH 381
           LKDLRE+CKMNLEMLNGMPMEKH
Sbjct: 361 LKDLREDCKMNLEMLNGMPMEKH 356

[Close]

BLAST of Carg16004-RA vs. ExPASy TrEMBL
Match: A0A6J1GE57 (uncharacterized protein LOC111453172 OS=Cucurbita moschata OX=3662 GN=LOC111453172 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.3e-141
Identity = 265/382 (69.37%), Postives = 295/382 (77.23%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNI D   HNR ALGNLTNRP KRK+SSILSDSG+K+RDGCGK VDGK  E + PKH
Sbjct: 1   MREDNIDDVFGHNRSALGNLTNRPLKRKLSSILSDSGIKTRDGCGKPVDGKDEESRCPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQ-ESECCPASSEVEAALSDVPMEIVQCD 120
           VRLQAA+YVKENC+ SCG+ CY+M LSRFS E+ ES C PASSE +  L +   E VQC+
Sbjct: 61  VRLQAAEYVKENCELSCGENCYSMGLSRFSTEKLESACSPASSEGDTVLFERAKETVQCN 120

Query: 121 LLNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVP 180
           L ND  HP Q+D+ RITD E L +PCLP S +P C                         
Sbjct: 121 LPNDEAHPEQEDEHRITDSEALGLPCLPTSVIPTC------------------------- 180

Query: 181 TYPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPK 240
             PEDDK++CPG M N+AD E AVD VSRNG+KDI  GKIGSS+HD T+  RLP+S   K
Sbjct: 181 --PEDDKEDCPGFMMNNADTEAAVDPVSRNGEKDIGIGKIGSSNHDSTQWSRLPISEGSK 240

Query: 241 SLALERCSGLKNDGCANLDI-DDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQK 300
           SLALERCSG K D CANL + DDL +TCSCSFC+KASYIWSDLHYQDIKGRISALKKSQK
Sbjct: 241 SLALERCSGFKTDNCANLGMYDDLLKTCSCSFCLKASYIWSDLHYQDIKGRISALKKSQK 300

Query: 301 DASILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTL 360
           DASILAQK SKEK+TYHDQGNSSKSKLEFDL GQWMSLFRHMED F+ EGSQLQTSFVTL
Sbjct: 301 DASILAQKSSKEKDTYHDQGNSSKSKLEFDLCGQWMSLFRHMEDMFAHEGSQLQTSFVTL 355

Query: 361 KDLREECKMNLEMLNGMPMEKH 381
           KDLRE+CKMNLEMLNGMP+EKH
Sbjct: 361 KDLREDCKMNLEMLNGMPLEKH 355

[Close]

BLAST of Carg16004-RA vs. ExPASy TrEMBL
Match: A0A6J1BTM4 (uncharacterized protein LOC111005240 OS=Momordica charantia OX=3673 GN=LOC111005240 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.8e-137
Identity = 263/381 (69.03%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           MREDNI D L HNR  LGNLTNRP KRKISSIL+DSGVKSRD C K +DGK  E +FPKH
Sbjct: 1   MREDNIEDVLDHNRTVLGNLTNRPLKRKISSILNDSGVKSRDDCSKTLDGKDEESRFPKH 60

Query: 61  VRLQAAKYVKENCKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDL 120
            RL+AAK+VKENC RS G+ C TMAL RF KEQES+C PASSE + ALS V  E VQC L
Sbjct: 61  ERLKAAKFVKENCNRSSGEVCSTMALPRFDKEQESDCSPASSEADTALSYVLKETVQCSL 120

Query: 121 LNDGVHPVQDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPT 180
           LND V  +Q+DK+R+TD E L VP L  S VP C                          
Sbjct: 121 LNDEVRLIQEDKQRVTDSEALGVPSLSTSVVPTC-------------------------- 180

Query: 181 YPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKS 240
            PED KK+C GIMQ +ADNEEA+DHV RN +KDI   K+GSS+H  TE  RLP+S   K 
Sbjct: 181 -PEDSKKDCSGIMQINADNEEAIDHVLRNDEKDIGICKLGSSNHGSTEWSRLPISEGSKC 240

Query: 241 LALERCSGLKNDGCANLDI-DDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKD 300
           LAL+RCSGLK D CAN D+  DL +TCSCSFC+KASYIWSDLHYQDIKGRIS LKKSQKD
Sbjct: 241 LALQRCSGLKTDNCANQDMYGDLLKTCSCSFCLKASYIWSDLHYQDIKGRISTLKKSQKD 300

Query: 301 ASILAQKCSKEKETYHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLK 360
           ASILAQK SKEKET HDQG SSKSKLEFDL GQW+SLFRHMED F+QEGSQLQTSFVTLK
Sbjct: 301 ASILAQKSSKEKETCHDQGISSKSKLEFDLCGQWISLFRHMEDMFAQEGSQLQTSFVTLK 354

Query: 361 DLREECKMNLEMLNGMPMEKH 381
           DLREECKMNLEMLNGMPMEKH
Sbjct: 361 DLREECKMNLEMLNGMPMEKH 354

[Close]

BLAST of Carg16004-RA vs. TAIR 10
Match: AT5G10110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-34
Identity = 131/392 (33.42%), Postives = 169/392 (43.11%), Query Frame = 0


Query: 1   MREDNIGDELHHNRPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGEPKFPKH 60
           M ED+        RP L +LTN P KR ISSIL D      D  GK V  +  + KF K 
Sbjct: 1   MTEDSSKSVSEQTRPVLSDLTNLPKKRGISSILGD----LLDESGKTVAHEVSKEKFSKR 60

Query: 61  VRLQAAKYVKENC------KRSCGKFCYTMALSRFSKEQESECCP--ASSEVEAALSDVP 120
           + L     VKEN       + SC  F    +     KE+  +     +S + +A      
Sbjct: 61  LCLVVDDLVKENATPLDTIQGSC-SFDKNTSGDAVDKEEYHDAVMEFSSGDCKALKESKS 120

Query: 121 MEIVQCDLLNDGVHPV----QDDKERITDGETLEVPCLPISAVPPCLPISAVPPCLPISV 180
           ++I       DG   +      D+  +T GE L +  L                      
Sbjct: 121 IQIYFEPGDRDGARELNAAANADQTDVTGGEGLALSLL---------------------- 180

Query: 181 VPPCFPISVVPTYPEDDKKNCPGIMQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTE 240
                                      ++D E      SRN        K G    DC  
Sbjct: 181 ---------------------------TSDTE------SRN------LLKTGKELSDCQN 240

Query: 241 LMRLPMSGDPKSLALERCSGLKNDGCANLDI-DDLFETCSCSFCMKASYIWSDLHYQDIK 300
           L         +S  + RCS +KN    NL+  DDL  +C CSFC+ ASYIWSDL+YQD K
Sbjct: 241 L---------RSFEMSRCSNVKNKEHVNLNTGDDLLRSCCCSFCLTASYIWSDLNYQDSK 300

Query: 301 GRISALKKSQKDASILAQKCSKEKET-YHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQ 360
           GR+SA+KKSQK AS L Q   KE+ T +H  GNS  +K E  L  QW SLF  M D  S+
Sbjct: 301 GRLSAMKKSQKAASNLIQGNVKERSTDFHATGNSVSAKQESKLMAQWRSLFLSMGDILSE 317

Query: 361 EGSQLQTSFVTLKDLREECKMNLEMLNGMPME 379
           E S LQ SFV +K LR++CKM+LE     P +
Sbjct: 361 ESSHLQNSFVRMKKLRDDCKMDLERAMKKPQQ 317

[Close]

BLAST of Carg16004-RA vs. TAIR 10
Match: AT5G65120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-29
Identity = 111/361 (30.75%), Postives = 164/361 (45.43%), Query Frame = 0


Query: 14  RPALGNLTNRPFKRKISSILSDSGVKSRDGCGKNVDGKYGE-PKFPKHVRLQAAKYVKEN 73
           R AL ++TN P KR +S+IL D  +KS D  GK++  + G   KF K + L     VKE+
Sbjct: 15  RVALCDMTNLPSKRGLSAILGDLLLKSGDDSGKSLAAREGSGVKFSKRLCLVVDDLVKES 74

Query: 74  CKRSCGKFCYTMALSRFSKEQESECCPASSEVEAALSDVPMEIVQCDLLNDGVHPVQDDK 133
            +                          +S+   A S        CD  N  V   Q + 
Sbjct: 75  TR--------------------------TSDTNEASSSEDKISYDCDSENLDVKESQGE- 134

Query: 134 ERITDGETLEVPCLPISAVPPCLPISAVPPCLPISVVPPCFPISVVPTYPEDDKKNCPGI 193
              T+   ++                          V P    +V  T  +D   N  G 
Sbjct: 135 ---TNAGDID--------------------------VEPSKDDTVKETCEKDSNMNVCGS 194

Query: 194 MQNSADNEEAVDHVSRNGKKDIEFGKIGSSDHDCTELMRLPMSGDPKSLALERCSGLKND 253
             ++  +E+                 + SS+++ +E + +P     KS  + RCS +   
Sbjct: 195 QTDAVTSEDLA-------------MTLFSSNNNESEGLLVPNPQAIKSFNMNRCSNVDGM 254

Query: 254 GCAN--LDIDDLFETCSCSFCMKASYIWSDLHYQDIKGRISALKKSQKDASILAQKCSKE 313
           G  N  ++ D   ++CSCSFC+ A+YIWSDLHYQDIKGR+S LKKSQK+AS L Q+  + 
Sbjct: 255 GIVNHHMEADGELKSCSCSFCLTAAYIWSDLHYQDIKGRLSVLKKSQKEASGLIQRNDRG 306

Query: 314 KET-YHDQGNSSKSKLEFDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKDLREECKMNL 371
             T  +   NS+ S    +   QW SLFR+ME   ++E + L  SFV +K+LRE CK++L
Sbjct: 315 TPTDIYGSENSNNSTNTDNPMEQWTSLFRNMEGILARESNHLHNSFVAMKELRENCKIDL 306

[Close]

BLAST of Carg16004-RA vs. TAIR 10
Match: AT5G05240.1 (Uncharacterised conserved protein (UCP030365) )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 33/122 (27.05%), Postives = 59/122 (48.36%), Query Frame = 0


Query: 278 WSDLHYQDIKGRISALKKSQKDASILAQ-----------KCSKEKETYHDQGNSSKSKLE 337
           W +L +QDIKGR+SAL++S+K    +                +E +     G +SK+   
Sbjct: 373 WLELLHQDIKGRVSALRRSRKRVRAVVTIELPHLIRKEFPADQENDPTLLLGGASKASTV 432

Query: 338 FDLWGQWMSLFRHMEDTFSQEGSQLQTSFVTLKDLREECKMNLEMLN----------GMP 379
                +WM+LF+ +E   S+E SQL++    ++ ++  C   L+ L+          GMP
Sbjct: 433 DIHKSRWMTLFKQLEHKLSEEESQLESWLNQVRYMQSHCDEGLQHLSLSSGQNFLQLGMP 492

The following BLAST results are available for this feature:

BLAST of Carg16004-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026834.1	1.0e-220	100.00	hypothetical protein SDJN02_10841, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6594869.1	2.3e-220	99.74	hypothetical protein SDJN03_11422, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962720.1	7.3e-219	99.21	uncharacterized protein LOC111463126 [Cucurbita moschata]	[more]
XP_023518820.1	9.5e-219	99.21	uncharacterized protein LOC111782225 [Cucurbita pepo subsp. pepo]	[more]
XP_023004026.1	3.7e-215	97.89	uncharacterized protein LOC111497458 [Cucurbita maxima]	[more]

BLAST of Carg16004-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16004-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFW9	3.5e-219	99.21	uncharacterized protein LOC111463126 OS=Cucurbita moschata OX=3662 GN=LOC1114631...	[more]
A0A6J1KQY6	1.8e-215	97.89	uncharacterized protein LOC111497458 OS=Cucurbita maxima OX=3661 GN=LOC111497458...	[more]
A0A6J1IQB8	6.4e-144	71.02	uncharacterized protein LOC111478471 OS=Cucurbita maxima OX=3661 GN=LOC111478471...	[more]
A0A6J1GE57	2.3e-141	69.37	uncharacterized protein LOC111453172 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1BTM4	5.8e-137	69.03	uncharacterized protein LOC111005240 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of Carg16004-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10110.1	3.1e-34	33.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65120.1	1.0e-29	30.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05240.1	1.2e-04	27.05	Uncharacterised conserved protein (UCP030365)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33924:SF1	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 1..133 coord: 190..379
None	No IPR available	PANTHER	PTHR33924	CATION-TRANSPORTING ATPASE	coord: 190..379
None	No IPR available	PANTHER	PTHR33924	CATION-TRANSPORTING ATPASE	coord: 1..133

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16004	Carg16004	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16004-RA:4	Carg16004-RA:4	exon
Carg16004-RA:3	Carg16004-RA:3	exon
Carg16004-RA:2	Carg16004-RA:2	exon
Carg16004-RA:1	Carg16004-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16004-RA:cds	Carg16004-RA:cds	CDS
Carg16004-RA:cds	Carg16004-RA:cds_2	CDS
Carg16004-RA:cds	Carg16004-RA:cds_3	CDS
Carg16004-RA:cds	Carg16004-RA:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16004-RA:three_prime_utr	Carg16004-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16004-RA	Carg16004-RA-protein	polypeptide