Carg15628-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15628-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	phosphoglucan phosphatase LSF1, chloroplastic isoform X1
Location	Carg_Chr11: 11232661 .. 11236710 (+)
Sequence length	1556
RNA-Seq Expression	Carg15628-RA
Synteny	Carg15628-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTTTAAGCGTAAGAACGAGAGGATTCTGAGTTCGAAAATGGCGGTTCTGCCTCTGCAGCTTTCTTGTGTGAGGACTATTGACAGTTCGTCTTCGCCATTGTTGAGAGGAGGTAAATCGTCGTTGTTTTGGGGAAGACATTTGCGCTTTGGAATTGGAGGTATTAGGGATGGTCCGGGAGTGAAAGCTGGATTCAATGGTCGAGGTTTTGAGGTTTTCGCTATGTCGGATGGCTCTTCTTCTTCGTATAAGATGAATCTCAATGAGTACTTGGTTACTCTCCAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGTATTTTAATTTCTCTTCATTTTAAATTTTGGTTTTGGTGTGTGTTGTCTGTGGTGCACTTGTTTGGAGTATCATATGTAGATTGAGTTGTGTACGGTTTCTCTTATGGTGTTCCTGTGAAGCCATGGTTTCAAATGTGTTCTTCAATTGAATTGAAATGTTGGGAGGCATGATACGAATTTTGTTCTCGTCTGTTGGCAGAGATGATTACTAGGGATAGATTGACAGTTAATACAACGAAGAATTTAGTTTCAAAATCAGAATTGTACCAGATTTAGATCTCTAAAAATTACCTCAAAGTCTGTTTTACTAGGACTGCTATGCTGTCTAATTGTGTTTTCTGGTTTAATTTATGTAACTAAACTCTTTGAATGCTTTGATGTTTGTATAACCTGTATCCGAGTGATGCCTCAATGATTCAACCAGATATTTGACTGCAAGAAACTTGATCTTTATAGGGTAATGCTGAGAAGTCGAGAATAATCATGGTGGGGGACACTTTAAAGAAGGCGAGCGATTCTTCTGGCGTCAAGCTCGTTGAGATCAAAGACTTTGGAGATACACAGTATGCACTATTCACTTGACGTAGAGTCTACAAGAATTGGGTGTATATTTCCTTTCTAAGTTATTAAATATTTGATTTAGAATTATGGAAATGCAAAACTTGTGTGTTAGTCTTAGAAGTTGATCGACTTTTCTATGATTTTCTTTTCAAGATTTTTCCCATTCATCATTTTTATGTTTGTTTTATTTTCAGTATTTGGTTTCTTCAGGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGCCTGGTTCTTGAAAGACCTTTCACTCCTTTTCCGATTCAACATCTTCTGCTTTCAAATGATTTAGATATTTTATTTAATCGAGGTCGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACACCTGATGCAAACAGTGGGAATTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACATCATTAGGTTGGAAACTTCTAAATAATCAAAATGGAGATGTTAAATCACCCATGCAGAGAAACACTCTCACACCTCAGATCAGCCAGGTTGTTTGTATATTTACCGAAGAGGATCCTGGAGAAGGAGAATGGGCTCATGGGAGCTTTCCCATAGACGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGGTGGGTTTTCGTTACTCATATAGTACTGTTACAGCTTGCTTAGAAATTCAACGTATTTGAGTCAAGAATTCATTAATACACTGAGAGCTCAAACTTTTTTTTTTGTCTGTTCATAACTCATACCATAGCATGGAGCTAACTTTCTTGACTAAATGTGCTGTGGTGATAGATCACAGAGCAAATTTATGTGGGGTCATGTTTACAGACTGAAGCAGATGTTGAGGCTTTGTCAAATAACGTGGTTAGTGCCCTTTCAATGTCTTTTTTTTTTCTTCTTCTTAAATTTATGTACTATGATCGTGCATGCTTAGAGGTTCATGTTGCTGATAGTAGCCATTAGGCACCTTTTTATTGTAGTTCAGTACTTTTTAGCTGTATTGCAGGATGGTCTTCGGCATTATTCTCAAGAAATTGGGGAAAAGTTGTGATTTAAGTCAAGCTATGGACTAACTAATAAAGATATGCTATCATAATCTACCTAAGTTTACAGACAAGATGATAAATGATCAACTTATAGTACCAAAGTGGATGTTACTCTAGATTTTATGAGGGATAGCAATATTTGCAGCTGTTCAATATAATCGACGTTCTGAATGAACAGTGTGAATATGTTATACACTATGAGTCATCTTGAGTCACCAATGTACCCTGAGTAACAATCAATGCAGAGTCACAATTGGTTTGATTTGAATCAAACCGAGACTTATTTTTTGGGTTTTCTTTGTTCTGTGTCTTGTCTATATTGGGTCCTGTACAATTAGGCCAAGTTTTTGAACCATGCCCTTATTGTATCTTGGATGCAAGCAGATTTTTGTTCTGTCTACTTAGTATTGAAAATGTTGAAGCTAACATTTGTTATGTTTCTTCTGTTTTAAATTTTCTGTTCCTGATGTTCGTCTGCACAGTTCTTAGTCCATCTTGGTTACACTTTTTTTGAACATTTGCTACAGGGAATCACCGCAGTTCTGAATTTTCAAAGTGCAACCGAGGCAGAAAACTGGGGGATTAGCTCCAAGTTAATCAATGAGTCGTGCCAAAAATATGATATTCTCATGATCAACTATCCTATTAGGTGAGTAAGGACTTTGTACCATATCCTGTAAATTTGATCACTCAAGAACGTTGATGATTGAAAAATTGATGCATTATGAGCGCAATTGTGAGGTTTCTGAATTTGAATTTTATTGGTCTTGCTAAATGAATTCCTTTTATTCAGAGATGAAATTATAGCCTTTTATTTTTTAAATTCGCTTTAATTAATGTTAACCATCTTGTTCATTTACCCGTCCCTAGATGTGATTATGCTACTTTGTGAATCCCATGACGAGAAATAAAAAATTGGGTATTATGAATTTCTCATGCTAAGAGCCATTATGTTGATCTCATAATCTTGTAATAGCATGACCGATTTATATAATTTATTTTTCTTCAGGGAAGGAGATTCTTATGATATGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTAACTTGTACCACCGGTTTTGATCGAGCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGTTTTCCTCAATACCACCTGCCATGTAGGAGTCGAGCACATCACAATTCAGTTGAATAGAATGACATTTCATATACATTGGAAGAACTAATGTGATTGCCCTTCGCTGATTTAGAAGTTGCATAAGTTATACATCCATCTAGAAGTGGAGAAAATCAAATACTATTCTTGTAAACGGCTGCTCATTGTTTGCATATCAGATAAATGTAGTGAATATCCATATAATACTAGTAAGAATAACTTCAGTAATACAAATTATTTTAGGTAGAATTCATTTAGGTTTAAAGTAGACAATATCATATCCTCAATACATGTTATCGAGGGACATGTTGCCATGTGTTGAGGACTTTACTTTTTTCAAGTTCTCACTTATTAACTCTTCCCCACTCCTTCCAATGTTATGGCTGGTCTGAAGCAGAGTTAAATATACATGATGCATATCCATCGCAATACATATTTCCTCTGCTATGATTTAAATTACATTCTTCAAAGCTTTTTGCAGGCCAGCAATTGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAACATGGAAGGCACGATGGACCTCCCACTCACGCCGTTACTTTTGTATGGAATGGTCAAGAGGTAATCGTGGAATCAGTCTCCATATCTTTACCAATCTTCTTGTTATTCTATTTATGAAGAAAATTATCTCCACTTTTTGTTTGCTACAGGGGGAGGATGTAAATTTGGTAGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCTAGTCACAAGGGTGGGCCAAGATATGAAGTAGAAATGAAACTTCCTCAAGGGAAGTAA

mRNA sequence

GATATTTTAAGCGTAAGAACGAGAGGATTCTGAGTTCGAAAATGGCGGTTCTGCCTCTGCAGCTTTCTTGTGTGAGGACTATTGACAGTTCGTCTTCGCCATTGTTGAGAGGAGGTAAATCGTCGTTGTTTTGGGGAAGACATTTGCGCTTTGGAATTGGAGGTATTAGGGATGGTCCGGGAGTGAAAGCTGGATTCAATGGTCGAGGTTTTGAGGTTTTCGCTATGTCGGATGGCTCTTCTTCTTCGTATAAGATGAATCTCAATGAGTACTTGGTTACTCTCCAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCGAGAATAATCATGGTGGGGGACACTTTAAAGAAGGCGAGCGATTCTTCTGGCGTCAAGCTCGTTGAGATCAAAGACTTTGGAGATACACAGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGCCTGGTTCTTGAAAGACCTTTCACTCCTTTTCCGATTCAACATCTTCTGCTTTCAAATGATTTAGATATTTTATTTAATCGAGGTCGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACACCTGATGCAAACAGTGGGAATTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACATCATTAGGTTGGAAACTTCTAAATAATCAAAATGGAGATGTTAAATCACCCATGCAGAGAAACACTCTCACACCTCAGATCAGCCAGGTTGTTTGTATATTTACCGAAGAGGATCCTGGAGAAGGAGAATGGGCTCATGGGAGCTTTCCCATAGACGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTTTACAGACTGAAGCAGATGTTGAGGCTTTGTCAAATAACGTGGGAATCACCGCAGTTCTGAATTTTCAAAGTGCAACCGAGGCAGAAAACTGGGGGATTAGCTCCAAGTTAATCAATGAGTCGTGCCAAAAATATGATATTCTCATGATCAACTATCCTATTAGGGAAGGAGATTCTTATGATATGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTAACTTGTACCACCGGTTTTGATCGAGCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCAGCAATTGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAACATGGAAGGCACGATGGACCTCCCACTCACGCCGTTACTTTTGTATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTAGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCTAGTCACAAGGGTGGGCCAAGATATGAAGTAGAAATGAAACTTCCTCAAGGGAAGTAA

Coding sequence (CDS)

ATGGCGGTTCTGCCTCTGCAGCTTTCTTGTGTGAGGACTATTGACAGTTCGTCTTCGCCATTGTTGAGAGGAGGTAAATCGTCGTTGTTTTGGGGAAGACATTTGCGCTTTGGAATTGGAGGTATTAGGGATGGTCCGGGAGTGAAAGCTGGATTCAATGGTCGAGGTTTTGAGGTTTTCGCTATGTCGGATGGCTCTTCTTCTTCGTATAAGATGAATCTCAATGAGTACTTGGTTACTCTCCAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCGAGAATAATCATGGTGGGGGACACTTTAAAGAAGGCGAGCGATTCTTCTGGCGTCAAGCTCGTTGAGATCAAAGACTTTGGAGATACACAGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGCCTGGTTCTTGAAAGACCTTTCACTCCTTTTCCGATTCAACATCTTCTGCTTTCAAATGATTTAGATATTTTATTTAATCGAGGTCGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACACCTGATGCAAACAGTGGGAATTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACATCATTAGGTTGGAAACTTCTAAATAATCAAAATGGAGATGTTAAATCACCCATGCAGAGAAACACTCTCACACCTCAGATCAGCCAGGTTGTTTGTATATTTACCGAAGAGGATCCTGGAGAAGGAGAATGGGCTCATGGGAGCTTTCCCATAGACGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTTTACAGACTGAAGCAGATGTTGAGGCTTTGTCAAATAACGTGGGAATCACCGCAGTTCTGAATTTTCAAAGTGCAACCGAGGCAGAAAACTGGGGGATTAGCTCCAAGTTAATCAATGAGTCGTGCCAAAAATATGATATTCTCATGATCAACTATCCTATTAGGGAAGGAGATTCTTATGATATGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTAACTTGTACCACCGGTTTTGATCGAGCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCAGCAATTGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAACATGGAAGGCACGATGGACCTCCCACTCACGCCGTTACTTTTGTATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTAGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCTAGTCACAAGGGTGGGCCAAGATATGAAGTAGAAATGAAACTTCCTCAAGGGAAGTAA

Protein sequence

MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVFAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGK

Homology

[Close]

BLAST of Carg15628-RA vs. NCBI nr
Match: KAG7022728.1 (Phosphoglucan phosphatase LSF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1031.2 bits (2665), Expect = 3.0e-297
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60
           MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF
Sbjct: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60

Query: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120
           AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL
Sbjct: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120

Query: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180
           KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG
Sbjct: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180

Query: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240
           RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL
Sbjct: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240

Query: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300
           TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY
Sbjct: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300

Query: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360
           VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE
Sbjct: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360

Query: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420
           GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF
Sbjct: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420

Query: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480
           ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW
Sbjct: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480

Query: 481 KEPVKASHKGGPRYEVEMKLPQGK 505
           KEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 KEPVKASHKGGPRYEVEMKLPQGK 504

[Close]

BLAST of Carg15628-RA vs. NCBI nr
Match: KAG6588960.1 (Phosphoglucan phosphatase LSF1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1029.6 bits (2661), Expect = 8.8e-297
Identity = 503/504 (99.80%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60
           MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF
Sbjct: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60

Query: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120
           A+SDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL
Sbjct: 61  AISDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120

Query: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180
           KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG
Sbjct: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180

Query: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240
           RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL
Sbjct: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240

Query: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300
           TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY
Sbjct: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300

Query: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360
           VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE
Sbjct: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360

Query: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420
           GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF
Sbjct: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420

Query: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480
           ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW
Sbjct: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480

Query: 481 KEPVKASHKGGPRYEVEMKLPQGK 505
           KEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 KEPVKASHKGGPRYEVEMKLPQGK 504

[Close]

BLAST of Carg15628-RA vs. NCBI nr
Match: XP_022928117.1 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 1028.1 bits (2657), Expect = 2.6e-296
Identity = 503/504 (99.80%), Postives = 503/504 (99.80%), Query Frame = 0


Query: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60
           MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKA FNGRGFEVF
Sbjct: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKARFNGRGFEVF 60

Query: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120
           AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL
Sbjct: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120

Query: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180
           KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG
Sbjct: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180

Query: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240
           RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL
Sbjct: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240

Query: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300
           TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY
Sbjct: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300

Query: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360
           VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE
Sbjct: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360

Query: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420
           GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF
Sbjct: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420

Query: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480
           ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW
Sbjct: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480

Query: 481 KEPVKASHKGGPRYEVEMKLPQGK 505
           KEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 KEPVKASHKGGPRYEVEMKLPQGK 504

[Close]

BLAST of Carg15628-RA vs. NCBI nr
Match: XP_023529352.1 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1019.6 bits (2635), Expect = 9.1e-294
Identity = 498/504 (98.81%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60
           MAVLPLQL CVRTIDSSSSPLLRGGKSSLFWGRHLR GIGGIRDGPGVKA FNGRGFEVF
Sbjct: 1   MAVLPLQLPCVRTIDSSSSPLLRGGKSSLFWGRHLRLGIGGIRDGPGVKARFNGRGFEVF 60

Query: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120
           AMSDGSSSSYKMNLNEY+VTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL
Sbjct: 61  AMSDGSSSSYKMNLNEYMVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120

Query: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180
           KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG
Sbjct: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180

Query: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240
           RVPIATWKKEVLASNLQTPDAN GNSGFATFSSKFST+LGWKLLNNQNGDVKSPMQRNTL
Sbjct: 181 RVPIATWKKEVLASNLQTPDANIGNSGFATFSSKFSTALGWKLLNNQNGDVKSPMQRNTL 240

Query: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300
           TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY
Sbjct: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300

Query: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360
           VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE
Sbjct: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360

Query: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420
           GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF
Sbjct: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420

Query: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480
           ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW
Sbjct: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480

Query: 481 KEPVKASHKGGPRYEVEMKLPQGK 505
           KEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 KEPVKASHKGGPRYEVEMKLPQGK 504

[Close]

BLAST of Carg15628-RA vs. NCBI nr
Match: XP_022989154.1 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 1003.8 bits (2594), Expect = 5.2e-289
Identity = 495/505 (98.02%), Postives = 497/505 (98.42%), Query Frame = 0


Query: 1   MAVLPL-QLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV 60
           MAVLPL QL CVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV
Sbjct: 1   MAVLPLQQLPCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV 60

Query: 61  FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT 120
           FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT
Sbjct: 61  FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT 120

Query: 121 LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR 180
           LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR
Sbjct: 121 LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR 180

Query: 181 GRVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNT 240
           GRVPIATWKKEVLA  +QT DAN GNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRN 
Sbjct: 181 GRVPIATWKKEVLA--VQTSDANCGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNI 240

Query: 241 LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQI 300
           LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERS+GELYYDHSRGMSYSKITEQI
Sbjct: 241 LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSRGELYYDHSRGMSYSKITEQI 300

Query: 301 YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR 360
           YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR
Sbjct: 301 YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR 360

Query: 361 EGDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN 420
           EGDSYD RKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN
Sbjct: 361 EGDSYDTRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN 420

Query: 421 FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN 480
           FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN
Sbjct: 421 FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN 480

Query: 481 WKEPVKASHKGGPRYEVEMKLPQGK 505
           WKEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 WKEPVKASHKGGPRYEVEMKLPQGK 503

[Close]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot
Match: F4J117 (Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSF1 PE=1 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 4.4e-198
Identity = 334/487 (68.58%), Postives = 399/487 (81.93%), Query Frame = 0


Query: 28  SLFWGRHLRFGIGGIRDGPGV-------KAGFNGRG---FEVFAMSDGSSSSYKMNLNEY 87
           S+  G   R G G + DG G+       K GFN R      V AMS  SS+ +KMNLNEY
Sbjct: 19  SIMIGSSFRSGNGRVFDGRGIAYLGSREKFGFNRRRRVVLRVVAMS-SSSTPFKMNLNEY 78

Query: 88  LVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLVEIKDF 147
           +VTL+KPLGIRFA+S DG+IFVH++KKG NAEK+RIIMVGDTLKKASDSSG  LVEIKDF
Sbjct: 79  MVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKASDSSGGTLVEIKDF 138

Query: 148 GDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIATWKKEVLASNLQ 207
           GDT+ ML EK GSFSLVLERPF+PFPIQ+LL  +DLD+L+NRGRV   TW K +L+SNL+
Sbjct: 139 GDTKKMLVEKTGSFSLVLERPFSPFPIQYLLHLSDLDLLYNRGRVSFVTWNKNLLSSNLR 198

Query: 208 TPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQISQVVCIFTEEDPG 267
                SGNSG+A FSSKF T  GWKLLN Q+   +S  ++N L+P IS +V +F+E+ PG
Sbjct: 199 ASSQGSGNSGYAAFSSKFFTPQGWKLLNRQSNSFQSGTKKNILSPPISPLVSVFSEDVPG 258

Query: 268 EGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNN 327
           +GEW +G+FP++EY+KAL+RSKGEL Y+H+ GM YSKITEQIYVGSC+QTE DVE LS  
Sbjct: 259 DGEWGYGNFPLEEYIKALDRSKGELSYNHALGMRYSKITEQIYVGSCIQTEEDVENLS-E 318

Query: 328 VGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYDMRKKLPFCVGLL 387
            GITA+LNFQ  TEA+NWGI S+ IN++CQK ++LMINYPI++ DS+D+RKKLP CVGLL
Sbjct: 319 AGITAILNFQGGTEAQNWGIDSQSINDACQKSEVLMINYPIKDADSFDLRKKLPLCVGLL 378

Query: 388 LRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWA 447
           LRLLKKNHRVFVTCTTGFDR+ A VIAYLHWMTDTSLHAAY+F+T LH+CKPDRPAIAWA
Sbjct: 379 LRLLKKNHRVFVTCTTGFDRSSACVIAYLHWMTDTSLHAAYSFVTGLHACKPDRPAIAWA 438

Query: 448 TWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVE 505
           TWDLIAMV+ G+HDG PTH+VTFVWNG EGE+V LVGDFTGNWKEP+KA+HKGGPR+E E
Sbjct: 439 TWDLIAMVDDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETE 498

[Close]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot
Match: Q9SRK5 (Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSF2 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.8e-24
Identity = 65/201 (32.34%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 244 ISQVVCIFTEEDPG-EGEWAHGSFPIDEYVKALERSKGELY-YDHSRGMSYSKITEQIYV 303
           ++ V C F+ E+PG  G        +++Y  A++R     Y Y H  GM+Y+ I +++ V
Sbjct: 43  LAGVSCKFSGENPGTNGVSLSSKNKMEDYNTAMKRLMRSPYEYHHDLGMNYTLIRDELIV 102

Query: 304 GSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREG 363
           GS  Q   D++ L     +  +LN Q   + E WGI    I   C++  I  +  P ++ 
Sbjct: 103 GSQPQKPEDIDHLKQEQNVAYILNLQQDKDIEYWGIDLDSIVRRCKELGIRHMRRPAKDF 162

Query: 364 DSYDMRKKLPFCVGLLLRLLKKNH-RVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 423
           D   +R +LP  V  L   + +   RV+V C+ G  RAP   IAY++W  D +L+ AY+ 
Sbjct: 163 DPLSLRSQLPKAVSSLEWAVSEGKGRVYVHCSAGLGRAPGVSIAYMYWFCDMNLNTAYDT 222

Query: 424 ITSLHSCKPDRPAIAWATWDL 442
           + S   C P++ AI  AT+DL
Sbjct: 223 LVSKRPCGPNKGAIRGATYDL 243

[Close]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot
Match: Q9FEB5 (Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.5e-23
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 269 DEYVKALERSKGE-LYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQ 328
           DEY + + ++ G  L Y H  GM+Y+ I   + VGSCLQT  DV+ L   +G+  +   Q
Sbjct: 74  DEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKL-RKIGVKTIFCLQ 133

Query: 329 SATEAENWGISSKLINESCQKY-DILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHR 388
              + E +G+    I    +KY DI  I   IR+ D++D+R +LP  VG L + +K+N  
Sbjct: 134 QDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGG 193

Query: 389 V-FVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLI 443
           V +V CT G  RAPA  + Y+ W+    L  A+  + S  SC P   AI  AT D++
Sbjct: 194 VTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDIL 249

[Close]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot
Match: G4LTX4 (Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa OX=21020 GN=DSP4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.1e-21
Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 0


Query: 282 LYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKL 341
           L Y H  G++Y+ I   + VGSCLQT  DV+ L  ++G+  +   Q  ++ E +G+    
Sbjct: 83  LTYRHELGINYNFIRPDLIVGSCLQTPEDVDKL-RSIGVKTIFCLQQNSDLEYFGVDING 142

Query: 342 INESCQKY-DILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHRV-FVTCTTGFDRAP 401
           I E  + Y DI  +   IR+ D++D+R +LP  V  L + + +N  V +V CT G  RAP
Sbjct: 143 IREYAKTYDDIQHLRAEIRDFDAFDLRVRLPAVVSKLYKAINRNGGVTYVHCTAGLGRAP 202

Query: 402 ASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVT 461
           A  +AY+ W+    L  A+N + S  SC P   AI  A  D++         G     VT
Sbjct: 203 AVTLAYMFWVQGYKLIEAHNLLQSKRSCFPKLDAIKSAAADILT--------GLRKKVVT 262

Query: 462 FVWNGQEGEDVNLVG 475
             W   +   + + G
Sbjct: 263 LTWKNPDCTTLEISG 268

[Close]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot
Match: O95278 (Laforin OS=Homo sapiens OX=9606 GN=EPM2A PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-08
Identity = 59/210 (28.10%), Postives = 94/210 (44.76%), Query Frame = 0


Query: 249 CIFTEEDPGEGEWAHGSFPIDEYVKALERSK-----GELYYDHS--RGMSYSKITEQIYV 308
           C + E +  +G +     PI  +++A   +       + Y++ +  + M YS+I   I++
Sbjct: 110 CTYNENNLVDGVYC---LPIGHWIEATGHTNEMKHTTDFYFNIAGHQAMHYSRILPNIWL 169

Query: 309 GSC-LQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKY-----DILMIN 368
           GSC  Q E     L + +GITAV+NFQ+      W I     +  C +Y        MI 
Sbjct: 170 GSCPRQVEHVTIKLKHELGITAVMNFQT-----EWDIVQN--SSGCNRYPEPMTPDTMIK 229

Query: 369 YPIREGDSY------DMR-----KKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIA 428
               EG +Y      DM      + LP  V LL  LL+K H V+V C  G  R+ A+V  
Sbjct: 230 LYREEGLAYIWMPTPDMSTEGRVQMLPQAVCLLHALLEKGHIVYVHCNAGVGRSTAAVCG 289

Query: 429 YLHWMTDTSLHAAYNFITSLHSCKPDRPAI 435
           +L ++   +L     F+ +       RPA+
Sbjct: 290 WLQYVMGWNLRKVQYFLMA------KRPAV 303

[Close]

BLAST of Carg15628-RA vs. ExPASy TrEMBL
Match: A0A6J1EJ02 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435043 PE=4 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 1.2e-296
Identity = 503/504 (99.80%), Postives = 503/504 (99.80%), Query Frame = 0


Query: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVF 60
           MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKA FNGRGFEVF
Sbjct: 1   MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKARFNGRGFEVF 60

Query: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120
           AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL
Sbjct: 61  AMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTL 120

Query: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180
           KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG
Sbjct: 121 KKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRG 180

Query: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240
           RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL
Sbjct: 181 RVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTL 240

Query: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300
           TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY
Sbjct: 241 TPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIY 300

Query: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360
           VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE
Sbjct: 301 VGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIRE 360

Query: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420
           GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF
Sbjct: 361 GDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 420

Query: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480
           ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW
Sbjct: 421 ITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNW 480

Query: 481 KEPVKASHKGGPRYEVEMKLPQGK 505
           KEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 KEPVKASHKGGPRYEVEMKLPQGK 504

[Close]

BLAST of Carg15628-RA vs. ExPASy TrEMBL
Match: A0A6J1JNK1 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486311 PE=4 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 2.5e-289
Identity = 495/505 (98.02%), Postives = 497/505 (98.42%), Query Frame = 0


Query: 1   MAVLPL-QLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV 60
           MAVLPL QL CVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV
Sbjct: 1   MAVLPLQQLPCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEV 60

Query: 61  FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT 120
           FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT
Sbjct: 61  FAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDT 120

Query: 121 LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR 180
           LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR
Sbjct: 121 LKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNR 180

Query: 181 GRVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNT 240
           GRVPIATWKKEVLA  +QT DAN GNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRN 
Sbjct: 181 GRVPIATWKKEVLA--VQTSDANCGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNI 240

Query: 241 LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQI 300
           LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERS+GELYYDHSRGMSYSKITEQI
Sbjct: 241 LTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSRGELYYDHSRGMSYSKITEQI 300

Query: 301 YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR 360
           YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR
Sbjct: 301 YVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIR 360

Query: 361 EGDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN 420
           EGDSYD RKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN
Sbjct: 361 EGDSYDTRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYN 420

Query: 421 FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN 480
           FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN
Sbjct: 421 FITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGN 480

Query: 481 WKEPVKASHKGGPRYEVEMKLPQGK 505
           WKEPVKASHKGGPRYEVEMKLPQGK
Sbjct: 481 WKEPVKASHKGGPRYEVEMKLPQGK 503

[Close]

BLAST of Carg15628-RA vs. ExPASy TrEMBL
Match: A0A0A0LCC8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837030 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 4.9e-261
Identity = 440/499 (88.18%), Postives = 469/499 (93.99%), Query Frame = 0


Query: 6   LQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVFAMSDG 65
           LQL CVR ID SSSPLLRG KSS FWGR L FG GG+RDGP  +A FNGR  +VFAMSD 
Sbjct: 4   LQLPCVRIIDYSSSPLLRGSKSSSFWGRDLCFGNGGVRDGPRPRASFNGRLVKVFAMSDT 63

Query: 66  SSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 125
           SSSS+KMNLNEY+VTL+KPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD
Sbjct: 64  SSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 123

Query: 126 SSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIA 185
           SSGV L+EIKDFGDTQMMLKEK GSFSLVLERPF+PFP+Q LLLSNDLDILFNRGRVPIA
Sbjct: 124 SSGVNLIEIKDFGDTQMMLKEKTGSFSLVLERPFSPFPVQQLLLSNDLDILFNRGRVPIA 183

Query: 186 TWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQIS 245
           TWKKE+LASNLQT D +SGNSGFA FSS F TS GWKLL +QN DVKS +QRN LTPQI 
Sbjct: 184 TWKKEILASNLQTSDESSGNSGFAAFSSNFLTSEGWKLLRDQNEDVKSHIQRNILTPQIG 243

Query: 246 QVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCL 305
           Q+V IFTE++PG+GEWAHGSFP+DEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSC+
Sbjct: 244 QLVGIFTEDEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCI 303

Query: 306 QTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYD 365
           QTEADVEALSNNVG+TAVLNFQSATEAENWGI++KLINESC K+DILMI+YPIREGDSYD
Sbjct: 304 QTEADVEALSNNVGVTAVLNFQSATEAENWGINAKLINESCLKFDILMISYPIREGDSYD 363

Query: 366 MRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLH 425
           +RKKLPFCVGLLLRLLKKNHRVF+TCT+GFDR+PASVIAYLHWMTDTSLHAAYNFITSLH
Sbjct: 364 LRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLH 423

Query: 426 SCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 485
           SCKPDRPAIAWATWDLIAMVE+GRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK
Sbjct: 424 SCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 483

Query: 486 ASHKGGPRYEVEMKLPQGK 505
           ASHKGGPRYEVEMKLPQGK
Sbjct: 484 ASHKGGPRYEVEMKLPQGK 502

[Close]

BLAST of Carg15628-RA vs. ExPASy TrEMBL
Match: A0A5D3BP45 (Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00410 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 5.5e-260
Identity = 438/499 (87.78%), Postives = 467/499 (93.59%), Query Frame = 0


Query: 6   LQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVFAMSDG 65
           LQL CV  ID SSSPLLR  KSSLFWGR L FG GGIRDGP  +A FNGR  ++FAMSD 
Sbjct: 4   LQLPCVGIIDYSSSPLLRASKSSLFWGRDLCFGNGGIRDGPRPRASFNGRVLKIFAMSDT 63

Query: 66  SSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 125
           SSSS+KMNLNEY+VTL+KPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD
Sbjct: 64  SSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 123

Query: 126 SSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIA 185
           SSGV L+EIKDFGDTQMMLKEK GSFSLVLERPF+PFPIQ LLLSNDL+ILFNRGRVPIA
Sbjct: 124 SSGVNLIEIKDFGDTQMMLKEKTGSFSLVLERPFSPFPIQQLLLSNDLEILFNRGRVPIA 183

Query: 186 TWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQIS 245
           TWKKE+LASNLQT D +SGNSGFA FSSKF TS GWKLL +QN D KS +QRN L PQI 
Sbjct: 184 TWKKEILASNLQTSDESSGNSGFAAFSSKFLTSEGWKLLRDQNEDTKSHIQRNILAPQIG 243

Query: 246 QVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCL 305
           Q+V IFTE++PG+GEWAHGSFP+DEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSC+
Sbjct: 244 QLVGIFTEDEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCI 303

Query: 306 QTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYD 365
           QTEADVEALSNNVG+TAVLNFQSATEAENWGI++KLINESCQK+DILMI+YPIREGDSYD
Sbjct: 304 QTEADVEALSNNVGVTAVLNFQSATEAENWGINAKLINESCQKFDILMISYPIREGDSYD 363

Query: 366 MRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLH 425
           +RKKLPFCVGLLLRLLKKNHRVF+TCT+GFDR+PASVIAYLHWMTDTSLHAAYNFITSLH
Sbjct: 364 LRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLH 423

Query: 426 SCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 485
           SCKPDRPAIAWATWDLIAMVE+GRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK
Sbjct: 424 SCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 483

Query: 486 ASHKGGPRYEVEMKLPQGK 505
           ASHKGGPRYE EMKLPQGK
Sbjct: 484 ASHKGGPRYEAEMKLPQGK 502

[Close]

BLAST of Carg15628-RA vs. ExPASy TrEMBL
Match: A0A1S3B8A8 (phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487090 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 5.5e-260
Identity = 438/499 (87.78%), Postives = 467/499 (93.59%), Query Frame = 0


Query: 6   LQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVFAMSDG 65
           LQL CV  ID SSSPLLR  KSSLFWGR L FG GGIRDGP  +A FNGR  ++FAMSD 
Sbjct: 4   LQLPCVGIIDYSSSPLLRASKSSLFWGRDLCFGNGGIRDGPRPRASFNGRVLKIFAMSDT 63

Query: 66  SSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 125
           SSSS+KMNLNEY+VTL+KPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD
Sbjct: 64  SSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASD 123

Query: 126 SSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIA 185
           SSGV L+EIKDFGDTQMMLKEK GSFSLVLERPF+PFPIQ LLLSNDL+ILFNRGRVPIA
Sbjct: 124 SSGVNLIEIKDFGDTQMMLKEKTGSFSLVLERPFSPFPIQQLLLSNDLEILFNRGRVPIA 183

Query: 186 TWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQIS 245
           TWKKE+LASNLQT D +SGNSGFA FSSKF TS GWKLL +QN D KS +QRN L PQI 
Sbjct: 184 TWKKEILASNLQTSDESSGNSGFAAFSSKFLTSEGWKLLRDQNEDTKSHIQRNILAPQIG 243

Query: 246 QVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCL 305
           Q+V IFTE++PG+GEWAHGSFP+DEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSC+
Sbjct: 244 QLVGIFTEDEPGDGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCI 303

Query: 306 QTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYD 365
           QTEADVEALSNNVG+TAVLNFQSATEAENWGI++KLINESCQK+DILMI+YPIREGDSYD
Sbjct: 304 QTEADVEALSNNVGVTAVLNFQSATEAENWGINAKLINESCQKFDILMISYPIREGDSYD 363

Query: 366 MRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLH 425
           +RKKLPFCVGLLLRLLKKNHRVF+TCT+GFDR+PASVIAYLHWMTDTSLHAAYNFITSLH
Sbjct: 364 LRKKLPFCVGLLLRLLKKNHRVFITCTSGFDRSPASVIAYLHWMTDTSLHAAYNFITSLH 423

Query: 426 SCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 485
           SCKPDRPAIAWATWDLIAMVE+GRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK
Sbjct: 424 SCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVK 483

Query: 486 ASHKGGPRYEVEMKLPQGK 505
           ASHKGGPRYE EMKLPQGK
Sbjct: 484 ASHKGGPRYEAEMKLPQGK 502

[Close]

BLAST of Carg15628-RA vs. TAIR 10
Match: AT3G01510.1 (like SEX4 1 )

HSP 1 Score: 692.2 bits (1785), Expect = 3.1e-199
Identity = 334/487 (68.58%), Postives = 399/487 (81.93%), Query Frame = 0


Query: 28  SLFWGRHLRFGIGGIRDGPGV-------KAGFNGRG---FEVFAMSDGSSSSYKMNLNEY 87
           S+  G   R G G + DG G+       K GFN R      V AMS  SS+ +KMNLNEY
Sbjct: 19  SIMIGSSFRSGNGRVFDGRGIAYLGSREKFGFNRRRRVVLRVVAMS-SSSTPFKMNLNEY 78

Query: 88  LVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLVEIKDF 147
           +VTL+KPLGIRFA+S DG+IFVH++KKG NAEK+RIIMVGDTLKKASDSSG  LVEIKDF
Sbjct: 79  MVTLEKPLGIRFALSADGKIFVHAIKKGSNAEKARIIMVGDTLKKASDSSGGTLVEIKDF 138

Query: 148 GDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIATWKKEVLASNLQ 207
           GDT+ ML EK GSFSLVLERPF+PFPIQ+LL  +DLD+L+NRGRV   TW K +L+SNL+
Sbjct: 139 GDTKKMLVEKTGSFSLVLERPFSPFPIQYLLHLSDLDLLYNRGRVSFVTWNKNLLSSNLR 198

Query: 208 TPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQISQVVCIFTEEDPG 267
                SGNSG+A FSSKF T  GWKLLN Q+   +S  ++N L+P IS +V +F+E+ PG
Sbjct: 199 ASSQGSGNSGYAAFSSKFFTPQGWKLLNRQSNSFQSGTKKNILSPPISPLVSVFSEDVPG 258

Query: 268 EGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNN 327
           +GEW +G+FP++EY+KAL+RSKGEL Y+H+ GM YSKITEQIYVGSC+QTE DVE LS  
Sbjct: 259 DGEWGYGNFPLEEYIKALDRSKGELSYNHALGMRYSKITEQIYVGSCIQTEEDVENLS-E 318

Query: 328 VGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYDMRKKLPFCVGLL 387
            GITA+LNFQ  TEA+NWGI S+ IN++CQK ++LMINYPI++ DS+D+RKKLP CVGLL
Sbjct: 319 AGITAILNFQGGTEAQNWGIDSQSINDACQKSEVLMINYPIKDADSFDLRKKLPLCVGLL 378

Query: 388 LRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWA 447
           LRLLKKNHRVFVTCTTGFDR+ A VIAYLHWMTDTSLHAAY+F+T LH+CKPDRPAIAWA
Sbjct: 379 LRLLKKNHRVFVTCTTGFDRSSACVIAYLHWMTDTSLHAAYSFVTGLHACKPDRPAIAWA 438

Query: 448 TWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVE 505
           TWDLIAMV+ G+HDG PTH+VTFVWNG EGE+V LVGDFTGNWKEP+KA+HKGGPR+E E
Sbjct: 439 TWDLIAMVDDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETE 498

[Close]

BLAST of Carg15628-RA vs. TAIR 10
Match: AT3G10940.1 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-25
Identity = 65/201 (32.34%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 244 ISQVVCIFTEEDPG-EGEWAHGSFPIDEYVKALERSKGELY-YDHSRGMSYSKITEQIYV 303
           ++ V C F+ E+PG  G        +++Y  A++R     Y Y H  GM+Y+ I +++ V
Sbjct: 43  LAGVSCKFSGENPGTNGVSLSSKNKMEDYNTAMKRLMRSPYEYHHDLGMNYTLIRDELIV 102

Query: 304 GSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREG 363
           GS  Q   D++ L     +  +LN Q   + E WGI    I   C++  I  +  P ++ 
Sbjct: 103 GSQPQKPEDIDHLKQEQNVAYILNLQQDKDIEYWGIDLDSIVRRCKELGIRHMRRPAKDF 162

Query: 364 DSYDMRKKLPFCVGLLLRLLKKNH-RVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNF 423
           D   +R +LP  V  L   + +   RV+V C+ G  RAP   IAY++W  D +L+ AY+ 
Sbjct: 163 DPLSLRSQLPKAVSSLEWAVSEGKGRVYVHCSAGLGRAPGVSIAYMYWFCDMNLNTAYDT 222

Query: 424 ITSLHSCKPDRPAIAWATWDL 442
           + S   C P++ AI  AT+DL
Sbjct: 223 LVSKRPCGPNKGAIRGATYDL 243

[Close]

BLAST of Carg15628-RA vs. TAIR 10
Match: AT3G52180.1 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 269 DEYVKALERSKGE-LYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQ 328
           DEY + + ++ G  L Y H  GM+Y+ I   + VGSCLQT  DV+ L   +G+  +   Q
Sbjct: 74  DEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKL-RKIGVKTIFCLQ 133

Query: 329 SATEAENWGISSKLINESCQKY-DILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHR 388
              + E +G+    I    +KY DI  I   IR+ D++D+R +LP  VG L + +K+N  
Sbjct: 134 QDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGG 193

Query: 389 V-FVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLI 443
           V +V CT G  RAPA  + Y+ W+    L  A+  + S  SC P   AI  AT D++
Sbjct: 194 VTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDIL 249

[Close]

BLAST of Carg15628-RA vs. TAIR 10
Match: AT3G52180.2 (dual specificity protein phosphatase (DsPTP1) family protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 269 DEYVKALERSKGE-LYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQ 328
           DEY + + ++ G  L Y H  GM+Y+ I   + VGSCLQT  DV+ L   +G+  +   Q
Sbjct: 74  DEYSQDMTQAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKL-RKIGVKTIFCLQ 133

Query: 329 SATEAENWGISSKLINESCQKY-DILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHR 388
              + E +G+    I    +KY DI  I   IR+ D++D+R +LP  VG L + +K+N  
Sbjct: 134 QDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGG 193

Query: 389 V-FVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLI 443
           V +V CT G  RAPA  + Y+ W+    L  A+  + S  SC P   AI  AT D++
Sbjct: 194 VTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDIL 249

The following BLAST results are available for this feature:

BLAST of Carg15628-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022728.1	3.0e-297	100.00	Phosphoglucan phosphatase LSF1, chloroplastic [Cucurbita argyrosperma subsp. arg...	[more]
KAG6588960.1	8.8e-297	99.80	Phosphoglucan phosphatase LSF1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022928117.1	2.6e-296	99.80	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023529352.1	9.1e-294	98.81	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_022989154.1	5.2e-289	98.02	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg15628-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J117	4.4e-198	68.58	Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SRK5	3.8e-24	32.34	Phosphoglucan phosphatase LSF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FEB5	5.5e-23	36.72	Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
G4LTX4	5.1e-21	32.31	Phosphoglucan phosphatase DSP4, amyloplastic OS=Castanea sativa OX=21020 GN=DSP4...	[more]
O95278	2.9e-08	28.10	Laforin OS=Homo sapiens OX=9606 GN=EPM2A PE=1 SV=2	[more]

BLAST of Carg15628-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ02	1.2e-296	99.80	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1JNK1	2.5e-289	98.02	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A0A0LCC8	4.9e-261	88.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837030 PE=4 SV=1	[more]
A0A5D3BP45	5.5e-260	87.78	Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B8A8	5.5e-260	87.78	phosphoglucan phosphatase LSF1, chloroplastic isoform X1 OS=Cucumis melo OX=3656...	[more]

BLAST of Carg15628-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01510.1	3.1e-199	68.58	like SEX4 1	[more]
AT3G10940.1	2.7e-25	32.34	dual specificity protein phosphatase (DsPTP1) family protein	[more]
AT3G52180.1	3.9e-24	36.72	dual specificity protein phosphatase (DsPTP1) family protein	[more]
AT3G52180.2	3.9e-24	36.72	dual specificity protein phosphatase (DsPTP1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000340	Dual specificity phosphatase, catalytic domain	PFAM	PF00782	DSPc	coord: 306..423 e-value: 3.0E-9 score: 36.8
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 453..504 e-value: 6.7E-6 score: 27.9
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10	Protein tyrosine phosphatase superfamily	coord: 280..452 e-value: 1.3E-37 score: 131.3
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 283..429
None	No IPR available	PIRSR	PIRSR000941-50	PIRSR000941-50	coord: 291..424 e-value: 8.8E-7 score: 26.1
None	No IPR available	PANTHER	PTHR47661	PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC	coord: 56..504
None	No IPR available	CDD	cd14526	DSP_laforin-like	coord: 290..436 e-value: 1.44827E-66 score: 209.36
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 458..504 e-value: 2.69488E-9 score: 51.8309
IPR030066	Putative phosphatase LSF1, chloroplastic	PANTHER	PTHR47661:SF2	PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC	coord: 56..504
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 78..159 score: 9.4308
IPR036034	PDZ superfamily	SUPERFAMILY	50156	PDZ domain-like	coord: 63..164

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15628	Carg15628	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15628-RA:1	Carg15628-RA:1	exon
Carg15628-RA:2	Carg15628-RA:2	exon
Carg15628-RA:3	Carg15628-RA:3	exon
Carg15628-RA:4	Carg15628-RA:4	exon
Carg15628-RA:5	Carg15628-RA:5	exon
Carg15628-RA:6	Carg15628-RA:6	exon
Carg15628-RA:7	Carg15628-RA:7	exon
Carg15628-RA:8	Carg15628-RA:8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15628-RA:five_prime_utr	Carg15628-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15628-RA:cds	Carg15628-RA:cds	CDS
Carg15628-RA:cds	Carg15628-RA:cds_2	CDS
Carg15628-RA:cds	Carg15628-RA:cds_3	CDS
Carg15628-RA:cds	Carg15628-RA:cds_4	CDS
Carg15628-RA:cds	Carg15628-RA:cds_5	CDS
Carg15628-RA:cds	Carg15628-RA:cds_6	CDS
Carg15628-RA:cds	Carg15628-RA:cds_7	CDS
Carg15628-RA:cds	Carg15628-RA:cds_8	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15628-RA	Carg15628-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0005983	starch catabolic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0043036	starch grain
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0004089	carbonate dehydratase activity
molecular_function	GO:0008270	zinc ion binding