Carg12304-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12304-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	tetraspanin-3-like
Location	Carg_Chr01: 2823120 .. 2825309 (+)
Sequence length	840
RNA-Seq Expression	Carg12304-RA
Synteny	Carg12304-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGCCAGCAACCACTTGATCGGTCTTCTAAACTTCCTAACCTTCCTCCTCTCCCTCCCCATCATCGGCGGCGGCATCTGGCTCAGCAGCCGCGCCAACACCACCGACTGCCTCAAATTCCTCCAGTGGCCTCTAATCGGCATCGGCGTCACCGTCATGATCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACCTTCCTAATGTGGTTCTACCTCTTCGTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGTCACCGAACGGGGCTCCGGCCGCCCCCTCCCCAACCGCGCCTACTTCGATTACTATCTCCAGGACTATTCTGGGTGGCTCAGGGACCGGGTCGCCGATGACTCCTACTGGGCTAAGATTAGCTCCTGTGTTAGAGACTCCGGATCATGCCGGAAAATTGTCAGAACCGTCAACGGTGTGCCGGAGACCGTTGATATGTTTTACCATAGACATCTCACTCCGGTCGAGGTACGTACACGTGGATTTTTTTTTTAATAATTATTTTAGAATATAATTTATTTATTTATTTATTAATTAATATTTTAGATAATCAAACTGATTATATTTAATAATTTTGTTTAATGTACTTAATTTAAGGATAGTTTTGTTGCATGTGGAGTGTTATTATTAGTGATGGGCCGAATGTCCCGGCCCACTAAGATCCCCCGGGCCCACCTTCTTTTATTAGTGATGGGTTAGATTGGTTACCCAAATTTATTAATAATTATTATTTTTTAAATAATTATTATTTATTTTCCATCACTCTCAAAAATAATTATTAATTAATTTTTCAAAATTTATATTTAAATTGAATCGTATGTTTGAAAATAAATAAATAAATGTTTTATGAATTAATTTTTTTTAATAAAAATTTGAATAAATGACTCGAACTAACTCAACCGGGAAAAATTATGTTTGAATTGGGTTCATTATTTAACAAAGTTTGTTCGGGTTGAAAAAATTGACAATTTAAATAATTAGATTAAGTCTAAAAAAATGTATCGACCAGCGTATTTACACAAAATAATAGATAATGTAGAATATTTTAAACCATTTGAAGGGATCGGGAGAGAGTGTAAAGAGAATAATATAAAAGTATCATAAAACTTTATTATATTCTTTTTTTTTTTTTGTATTGCAAAAAAGTGCCTTTTTTTTCCCTATGAATATTCTTATTTTATTTTATTTTTTCTTTTCCTTTTTCCTTTGTTTTGTGCATGCATATTCATATGGTCGGTCCATTGTAGTTAGAAAACGATCTTTTAGGAAAAATGAAATTAGAACCTTATCCATTGTAGAAAAAGAATCGTGGACCAAATTTTAGAATTGTGGTATCGAACCTATTTACTTAAAACGTATCGAGATTGTTAGATCCTGATCATCGTGTTCTTGAGACACTTATATTTTGAATGATATACGTTTAGTCTCTATTAGTAGACGATAGGCATGATCGTGATTATTGAACATAGTTTATTGACCCATATCTTGTAGTCTTTTAGATTATAAAAATAGAGTACCTTCCTCGGTAAAAGCTACAATGATATACTTGAAATGATAGAACAAAAGAAAAGTTAATAGCCAATGCAACATGGAGTTCTTCCAACGGTTACAAATACGACTAACATTGACTCGAGTCATGGATCGTTAAGTACTGACACGAGGTGTTTGAAAGATATCTATGGCGACACAAATAGAATCAGAGCTAACGACACCACGAATAGACCTATGAACATACGCAACGATTGAAATAGTTTAAGTTATGATTTGATTTCTTGAAACATGATATGATTCATCATCTTGGTTGCTATATGTGTGAAGTCTGGTTGCTGCAAGCCACCCACAGTTTGCGGATATGTATATGTGAACGAGACGGCGTGGGATGTGGGAGGAGGGGTGGTGGGCGGCGAGCCTGACTGTGGCAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCCAATCTCAAGAAGAGCTGGAGAAAGGTCTCGGTCGTCAACATCATCGTTTTGATTGTTCTTGTCGTCTCTTATGTTATTGGTTATGCAGCTTTTCGAAACAATCGTCGCATCGACAATAATGAACCTGCCAGTACTGCTCGCATGACCAAATCAAAACCG

mRNA sequence

ATGAGAGCCAGCAACCACTTGATCGGTCTTCTAAACTTCCTAACCTTCCTCCTCTCCCTCCCCATCATCGGCGGCGGCATCTGGCTCAGCAGCCGCGCCAACACCACCGACTGCCTCAAATTCCTCCAGTGGCCTCTAATCGGCATCGGCGTCACCGTCATGATCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACCTTCCTAATGTGGTTCTACCTCTTCGTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGTCACCGAACGGGGCTCCGGCCGCCCCCTCCCCAACCGCGCCTACTTCGATTACTATCTCCAGGACTATTCTGGGTGGCTCAGGGACCGGGTCGCCGATGACTCCTACTGGGCTAAGATTAGCTCCTGTGTTAGAGACTCCGGATCATGCCGGAAAATTGTCAGAACCGTCAACGGTGTGCCGGAGACCGTTGATATGTTTTACCATAGACATCTCACTCCGGTCGAGTCTGGTTGCTGCAAGCCACCCACAGTTTGCGGATATGTATATGTGAACGAGACGGCGTGGGATGTGGGAGGAGGGGTGGTGGGCGGCGAGCCTGACTGTGGCAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCCAATCTCAAGAAGAGCTGGAGAAAGGTCTCGGTCGTCAACATCATCGTTTTGATTGTTCTTGTCGTCTCTTATGTTATTGGTTATGCAGCTTTTCGAAACAATCGTCGCATCGACAATAATGAACCTGCCAGTACTGCTCGCATGACCAAATCAAAACCG

Coding sequence (CDS)

ATGAGAGCCAGCAACCACTTGATCGGTCTTCTAAACTTCCTAACCTTCCTCCTCTCCCTCCCCATCATCGGCGGCGGCATCTGGCTCAGCAGCCGCGCCAACACCACCGACTGCCTCAAATTCCTCCAGTGGCCTCTAATCGGCATCGGCGTCACCGTCATGATCGTCTCCCTCGCCGGCTTCGGCGGCGCCTGCTACCGCAACACCTTCCTAATGTGGTTCTACCTCTTCGTCATGTTCTTCGTCATCGGCGCCCTCGTCGGCTTCATCATCTTCGCCTACGCCGTCACCGAACGGGGCTCCGGCCGCCCCCTCCCCAACCGCGCCTACTTCGATTACTATCTCCAGGACTATTCTGGGTGGCTCAGGGACCGGGTCGCCGATGACTCCTACTGGGCTAAGATTAGCTCCTGTGTTAGAGACTCCGGATCATGCCGGAAAATTGTCAGAACCGTCAACGGTGTGCCGGAGACCGTTGATATGTTTTACCATAGACATCTCACTCCGGTCGAGTCTGGTTGCTGCAAGCCACCCACAGTTTGCGGATATGTATATGTGAACGAGACGGCGTGGGATGTGGGAGGAGGGGTGGTGGGCGGCGAGCCTGACTGTGGCAGGTGGAGCAATGACCAAGACCAACTTTGCTATGCTTGTGACTCTTGCAAGGCTGGGGTTCTAGCCAATCTCAAGAAGAGCTGGAGAAAGGTCTCGGTCGTCAACATCATCGTTTTGATTGTTCTTGTCGTCTCTTATGTTATTGGTTATGCAGCTTTTCGAAACAATCGTCGCATCGACAATAATGAACCTGCCAGTACTGCTCGCATGACCAAATCAAAACCG

Protein sequence

MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAGFGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSGWLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTVCGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNIIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP

Homology

[Close]

BLAST of Carg12304-RA vs. NCBI nr
Match: XP_022948516.1 (tetraspanin-3-like [Cucurbita moschata])

HSP 1 Score: 580.1 bits (1494), Expect = 1.0e-161
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. NCBI nr
Match: KAG6607175.1 (Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.1 bits (1494), Expect = 1.0e-161
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. NCBI nr
Match: KAG7036861.1 (Tetraspanin-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 580.1 bits (1494), Expect = 1.0e-161
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. NCBI nr
Match: XP_023521528.1 (tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.2 bits (1489), Expect = 3.9e-161
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLV+SYVIGYA FRNNRRIDNNEPASTARMTKSKP
Sbjct: 241 IIVLIVLVISYVIGYATFRNNRRIDNNEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. NCBI nr
Match: XP_022998885.1 (tetraspanin-3-like [Cucurbita maxima])

HSP 1 Score: 576.2 bits (1484), Expect = 1.5e-160
Identity = 278/280 (99.29%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTV+GVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVSGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDN+EPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNDEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.7e-125
Identity = 207/280 (73.93%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MR SNHLIGL+NFLTFLLS+PI+GGGIWLSSRAN+TDCL+FLQWPLI IG+++M+VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           F GACYRN FLMW YL VM  +I AL+GFIIFAYAVT++GSGR + NR Y DYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WL+DRV+DDSYW KISSC+RDSG+CRKI R  NGVPET DMF+ R L+PVESGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CG+ YVNET WD  GG++G   DC  WSNDQ  LCY C SCKAGVL +LKKSWRKVSV+N
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           I+VLI+LV+ YVI YAA+RN +RIDN+EPA  ARMTKS P
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-113
Identity = 189/276 (68.48%), Postives = 226/276 (81.88%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MR+ ++LIGL+NF TFLLS+PI+GGGIWLSSRAN+TDCL+FLQWPLI IG+++M++SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
             GACY+N FLMW YLF MFFVI AL+GF IFAY VT++GSGR + NR Y DYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WL+DRV D+ YW  I SCVRDSG C+KI R +NGVPET  MFY R+L+PVESGCCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGY YVNET W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL +LKKSWRKVSV+N
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMT 277
           I+V+I+LV+ YVI  AA++N +R+ N+EP   ARMT
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.2e-69
Identity = 124/265 (46.79%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 2   RASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAGF 61
           R SN+L+G+LNFL FLLS+PI+ GGIWLS +  +T+C +FL  P+I +GV +M+V++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  GGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSGW 121
            G+C R T+L+W YLFVMF +I  +    +FA+ VT +G+G  +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTVC 181
           L+ RV +   W KI SC+ +S  C K+      VP  V+ FY  HLT ++SGCCKP   C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNI 241
           G+ YVN T W          PDC  W N +++LC+ C SCKAG+L N+K +W+KV++VNI
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 IVLIVLVVSYVIGYAAFRNNRRIDN 267
           + L+ L++ Y +G  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.5e-64
Identity = 125/263 (47.53%), Postives = 173/263 (65.78%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           +R SN L+G+LNF  FLLS+PI+  GIWLS +A TT C +FL  P+I +GV +MI+++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I  ++ F IFA+ VT +GSG  +  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKI-VRTVNGVPETVDMFYHRHLTPVESGCCKPPT 180
           WL+ RV +  +W  I SC+ +S  C  + + T N    TV  FY   LT  ESGCCKP  
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN---HTVSDFYKEDLTAFESGCCKPSN 181

Query: 181 VCGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVV 240
            C + Y+  T W+   G      DC  W N++ +LCY C +CKAG L NLK +W++V++V
Sbjct: 182 DCDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIV 241

Query: 241 NIIVLIVLVVSYVIGYAAFRNNR 263
           NII L++LVV Y +G  AFRNN+
Sbjct: 242 NIIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-63
Identity = 125/263 (47.53%), Postives = 169/263 (64.26%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           M  SN++IG +NF+T LLS+P+IG GIWL+       C+K LQWP+I +GV +++V LAG
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAI-GTVNSCVKLLQWPVIILGVLILLVGLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVI---GALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQD 120
           F G  +R T+L+  YL  M  +I   G LVGFI   Y VT RGSG P P+RAY +Y LQD
Sbjct: 61  FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFI---YMVTIRGSGHPEPSRAYLEYSLQD 120

Query: 121 YSGWLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKP 180
           +SGWLR RV     W +I +C+  +  C ++    N        F++ HL P++SGCCKP
Sbjct: 121 FSGWLRRRVQRSYKWERIRTCLSTTTICPEL----NQRYTLAQDFFNAHLDPIQSGCCKP 180

Query: 181 PTVCGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVS 240
           PT CG+ +VN T W +    +  + DC  WSNDQ+ LCY CDSCKAG+LAN+K  W K  
Sbjct: 181 PTKCGFTFVNPTYW-ISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKAD 240

Query: 241 VVNIIVLIVLVVSYVIGYAAFRN 261
           +  ++ LI L++ Y+IG  AFRN
Sbjct: 241 IFLLLALIGLIIVYIIGCCAFRN 254

[Close]

BLAST of Carg12304-RA vs. ExPASy TrEMBL
Match: A0A6J1G9E4 (tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.0e-162
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy TrEMBL
Match: A0A6J1KDR8 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 7.2e-161
Identity = 278/280 (99.29%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG
Sbjct: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADDSYWAKISSCVRDSGSCRKIVRTV+GVPETVDMFYHRHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVSGVPETVDMFYHRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN
Sbjct: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLIVLVVSYVIGYAAFRNNRRIDN+EPASTARMTKSKP
Sbjct: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNDEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy TrEMBL
Match: A0A1S3CJB4 (tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.0e-151
Identity = 256/280 (91.43%), Postives = 271/280 (96.79%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNF+TFLLSLPIIGGG+WLSSRANTTDCLKFLQWPLIGIGV +M+VSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLIGIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTE+GSGRPLPNR YFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADD+YW KISSCVRDS +CRKI RT++GVPETVDMFY RHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNET WD GGG+VG EPDCGRWSNDQDQLCYACDSCKAGVLA+LKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGAEPDCGRWSNDQDQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           IIVLI+LV+SYVIGYAAFRNNRRIDN+EPASTARMTKSKP
Sbjct: 241 IIVLIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy TrEMBL
Match: A0A0A0LS61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149
Identity = 254/280 (90.71%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MRASNHLIGLLNF+TFLLSLPIIGGG+WLSSRANTTDCLKFLQWPLI IGV +MIVSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLISIGVAIMIVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTE+GSGRPLPNR YFDYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDRVADD+YW KISSCVRDS +CRKI RT++GVPETVDMFY RHLTPVESGCCKPPTV
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYRRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNET WD GGG+VGGEPDCGRWSNDQ QLCYACDSCKA VLA+LKKSWRKVSV+N
Sbjct: 181 CGYVYVNETMWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           II LI+LV+SYVIGYAAFRNNRRIDN+EPASTARMTKSKP
Sbjct: 241 IIALIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKP 280

[Close]

BLAST of Carg12304-RA vs. ExPASy TrEMBL
Match: A0A6J1I2T9 (tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.2e-141
Identity = 235/280 (83.93%), Postives = 260/280 (92.86%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MR SNHLIGLLNFLTFLLSLPIIGGG+WL++ ANTTDCLKFLQWPLI IGV +M+VSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSLPIIGGGVWLTNHANTTDCLKFLQWPLIVIGVAIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           FGGACYRNTFLMW YLF MFF+I A++GFIIFAYAVT++GSGRPLPNR Y DYYLQDYSG
Sbjct: 61  FGGACYRNTFLMWLYLFAMFFIIAAILGFIIFAYAVTDKGSGRPLPNRLYLDYYLQDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WLRDR+ADD+YWAKISSCVRDS +CRKI RTV  +PET+DMFY RHLTPVESGCCKPPTV
Sbjct: 121 WLRDRIADDAYWAKISSCVRDSNACRKIGRTVGSLPETIDMFYLRHLTPVESGCCKPPTV 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGYVYVNET WDVGGG+VG EPDC RWSNDQ QLCYACDSCKAGVLA+LKKSWRKVSV+N
Sbjct: 181 CGYVYVNETVWDVGGGLVGPEPDCARWSNDQHQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           I+VLI+LV+SYV+GYAAFRNNRR+DN+EPA +ARMTK KP
Sbjct: 241 IVVLIILVISYVVGYAAFRNNRRMDNDEPAGSARMTKYKP 280

[Close]

BLAST of Carg12304-RA vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-126
Identity = 207/280 (73.93%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MR SNHLIGL+NFLTFLLS+PI+GGGIWLSSRAN+TDCL+FLQWPLI IG+++M+VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
           F GACYRN FLMW YL VM  +I AL+GFIIFAYAVT++GSGR + NR Y DYYL+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WL+DRV+DDSYW KISSC+RDSG+CRKI R  NGVPET DMF+ R L+PVESGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CG+ YVNET WD  GG++G   DC  WSNDQ  LCY C SCKAGVL +LKKSWRKVSV+N
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMTKSKP 281
           I+VLI+LV+ YVI YAA+RN +RIDN+EPA  ARMTKS P
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of Carg12304-RA vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 410.6 bits (1054), Expect = 1.0e-114
Identity = 189/276 (68.48%), Postives = 226/276 (81.88%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           MR+ ++LIGL+NF TFLLS+PI+GGGIWLSSRAN+TDCL+FLQWPLI IG+++M++SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
             GACY+N FLMW YLF MFFVI AL+GF IFAY VT++GSGR + NR Y DYYL DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTV 180
           WL+DRV D+ YW  I SCVRDSG C+KI R +NGVPET  MFY R+L+PVESGCCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVN 240
           CGY YVNET W  GG +VG  PDC  W+NDQ  LCY C SCKAGVL +LKKSWRKVSV+N
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IIVLIVLVVSYVIGYAAFRNNRRIDNNEPASTARMT 277
           I+V+I+LV+ YVI  AA++N +R+ N+EP   ARMT
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMT 276

[Close]

BLAST of Carg12304-RA vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 262.3 bits (669), Expect = 4.4e-70
Identity = 124/265 (46.79%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 2   RASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAGF 61
           R SN+L+G+LNFL FLLS+PI+ GGIWLS +  +T+C +FL  P+I +GV +M+V++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQK-GSTECERFLDKPVIALGVFLMVVAIAGL 62

Query: 62  GGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSGW 121
            G+C R T+L+W YLFVMF +I  +    +FA+ VT +G+G  +  + Y +Y L DYS W
Sbjct: 63  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 122

Query: 122 LRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKPPTVC 181
           L+ RV +   W KI SC+ +S  C K+      VP  V+ FY  HLT ++SGCCKP   C
Sbjct: 123 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 182

Query: 182 GYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVVNI 241
           G+ YVN T W          PDC  W N +++LC+ C SCKAG+L N+K +W+KV++VNI
Sbjct: 183 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 242

Query: 242 IVLIVLVVSYVIGYAAFRNNRRIDN 267
           + L+ L++ Y +G  AFRNN+R D+
Sbjct: 243 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg12304-RA vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-65
Identity = 125/263 (47.53%), Postives = 173/263 (65.78%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           +R SN L+G+LNF  FLLS+PI+  GIWLS +A TT C +FL  P+I +GV +MI+++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKA-TTQCERFLDKPMIALGVFLMIIAIAG 61

Query: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQDYSG 120
             G+C R T+L+W YLFVMFF+I  ++ F IFA+ VT +GSG  +  +AY +Y L+ YS 
Sbjct: 62  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 121

Query: 121 WLRDRVADDSYWAKISSCVRDSGSCRKI-VRTVNGVPETVDMFYHRHLTPVESGCCKPPT 180
           WL+ RV +  +W  I SC+ +S  C  + + T N    TV  FY   LT  ESGCCKP  
Sbjct: 122 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTAN---HTVSDFYKEDLTAFESGCCKPSN 181

Query: 181 VCGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVSVV 240
            C + Y+  T W+   G      DC  W N++ +LCY C +CKAG L NLK +W++V++V
Sbjct: 182 DCDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIV 241

Query: 241 NIIVLIVLVVSYVIGYAAFRNNR 263
           NII L++LVV Y +G  AFRNN+
Sbjct: 242 NIIFLVLLVVVYAMGCCAFRNNK 259

[Close]

BLAST of Carg12304-RA vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 245.0 bits (624), Expect = 7.3e-65
Identity = 125/263 (47.53%), Postives = 169/263 (64.26%), Query Frame = 0


Query: 1   MRASNHLIGLLNFLTFLLSLPIIGGGIWLSSRANTTDCLKFLQWPLIGIGVTVMIVSLAG 60
           M  SN++IG +NF+T LLS+P+IG GIWL+       C+K LQWP+I +GV +++V LAG
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAI-GTVNSCVKLLQWPVIILGVLILLVGLAG 60

Query: 61  FGGACYRNTFLMWFYLFVMFFVI---GALVGFIIFAYAVTERGSGRPLPNRAYFDYYLQD 120
           F G  +R T+L+  YL  M  +I   G LVGFI   Y VT RGSG P P+RAY +Y LQD
Sbjct: 61  FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFI---YMVTIRGSGHPEPSRAYLEYSLQD 120

Query: 121 YSGWLRDRVADDSYWAKISSCVRDSGSCRKIVRTVNGVPETVDMFYHRHLTPVESGCCKP 180
           +SGWLR RV     W +I +C+  +  C ++    N        F++ HL P++SGCCKP
Sbjct: 121 FSGWLRRRVQRSYKWERIRTCLSTTTICPEL----NQRYTLAQDFFNAHLDPIQSGCCKP 180

Query: 181 PTVCGYVYVNETAWDVGGGVVGGEPDCGRWSNDQDQLCYACDSCKAGVLANLKKSWRKVS 240
           PT CG+ +VN T W +    +  + DC  WSNDQ+ LCY CDSCKAG+LAN+K  W K  
Sbjct: 181 PTKCGFTFVNPTYW-ISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKAD 240

Query: 241 VVNIIVLIVLVVSYVIGYAAFRN 261
           +  ++ LI L++ Y+IG  AFRN
Sbjct: 241 IFLLLALIGLIIVYIIGCCAFRN 254

The following BLAST results are available for this feature:

BLAST of Carg12304-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948516.1	1.0e-161	100.00	tetraspanin-3-like [Cucurbita moschata]	[more]
KAG6607175.1	1.0e-161	100.00	Tetraspanin-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036861.1	1.0e-161	100.00	Tetraspanin-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023521528.1	3.9e-161	99.29	tetraspanin-3-like [Cucurbita pepo subsp. pepo] >XP_023523592.1 tetraspanin-3-li...	[more]
XP_022998885.1	1.5e-160	99.29	tetraspanin-3-like [Cucurbita maxima]	[more]

BLAST of Carg12304-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1E7	4.7e-125	73.93	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	1.4e-113	68.48	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q8S8Q6	6.2e-69	46.79	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9M0B7	3.5e-64	47.53	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q9FIQ5	1.0e-63	47.53	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]

BLAST of Carg12304-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9E4	5.0e-162	100.00	tetraspanin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111452174 PE=4 SV=1	[more]
A0A6J1KDR8	7.2e-161	99.29	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493409 PE=4 SV=1	[more]
A0A1S3CJB4	3.0e-151	91.43	tetraspanin-3-like OS=Cucumis melo OX=3656 GN=LOC103501616 PE=4 SV=1	[more]
A0A0A0LS61	1.3e-149	90.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089490 PE=4 SV=1	[more]
A0A6J1I2T9	2.2e-141	83.93	tetraspanin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469410 PE=3 SV=1	[more]

BLAST of Carg12304-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45600.1	3.3e-126	73.93	tetraspanin3	[more]
AT5G60220.1	1.0e-114	68.48	tetraspanin4	[more]
AT2G23810.1	4.4e-70	46.79	tetraspanin8	[more]
AT4G30430.1	2.5e-65	47.53	tetraspanin9	[more]
AT5G46700.1	7.3e-65	47.53	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 6..253 e-value: 1.2E-29 score: 103.7
None	No IPR available	PANTHER	PTHR32191:SF77	TETRASPANIN-3-LIKE	coord: 1..277
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..277

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12304	Carg12304	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12304-RA:1	Carg12304-RA:1	exon
Carg12304-RA:2	Carg12304-RA:2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12304-RA:cds	Carg12304-RA:cds	CDS
Carg12304-RA:cds	Carg12304-RA:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12304-RA	Carg12304-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0022857	transmembrane transporter activity