Carg12167-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12167-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	myb family transcription factor EFM-like
Location	Carg_Chr11: 2538211 .. 2540074 (-)
Sequence length	1519
RNA-Seq Expression	Carg12167-RA
Synteny	Carg12167-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTACTCAGCTCAGCTTGGAATGTCAAGTTCAAAGCTATTCCATGCTGCTTCAATATTCTTTTGGAGACCAACACCAAGTGGCGCCTAATTCTGATGACTTCTATTATAAGCTTCAGGAATTCGTTTCTCGCCTTGAACAAGAGCGCCTTAAAATTGATGTCTTCAAACGGGAGCTTCCCCTTTGTATGCAGCTTTTGACCAACGGTACTATCTATATCTAAATCTTCCACTTACTTTGTATTTTGTAGTTTGCTAAATTTGGTATGTTTGTAGCTGTGGAGACGTCCAGGAGACAGCTGCAGGCCTGCAAGGCAATAGAGCCGCCGCCATCCAAGCCGGTTTTGGAAGAATTCATGCCGCTCAAAAACTCCACAACGGTGGATGATGAAAAGCCGCCCGCAATATTATCGGATAAGGCAAATTGGATGACGTCACTTCAGCTTTGGAGTCAAGCAAATAAGGAATATACTACTGATCCACCTCATTCCCATAATAATAACAATAATTCAGACACTCCTAAACAGAGAGTTAGTAATGGAGCTTTTGTTCCGTTCGATAAAGATCGAAACTTGGAGCCGGGTTTGGGTGTTGGCGGAGGCGGCGTGAATGGGGTGGCGGCGGAAATGGAGTTACTGGAGAAAGGTGAGAAGAAGGAGAAGAAGAATCATTGTGGTGATACTAATAATAACGTTGATGGTGGGATCGTAACGGCGACGGAGGACAGGGCTGAACGTGGAGCAGGGGAGGTGGGATTGGCTCCAACAACAACGAGTTCAACTACTACTCAGACACACCGGAAGGCTAGACGATGCTGGTCGCCGGACTTGCACCGGAGATTCGTCAATGCTCTTCAGATGCTTGGTGGCTCTCAAGGTATACATCGTTTAATTTAGTGGCATGAATGATATTAATTTATAAGCGAGAAATATTGTCTCCAGTCTCGCAAGGGCAGTTTAAAGTGGACAATATTATAATGTTTTAAAAAAAAAAATATATATTTTTGTCGATGTGTGGAGAGTGGTGATTACTAACTAAATTAATAATTTTTATTAAATTTAAAACAGTTGCGACACCAAAGCAGATAAGAGAGTTGATGAAAGTAGACGGTTTGACGAACGATGAAGTAAAAAGCCATCTCCAGGTCAGCTTTTTATCCCCGCAATTTATATTACCCATCTTTGCGTTAATTTGCGTTAATTTGCGTTAATTTTGTCGTACACTGTCAGAAATACCGGCTCCACACAGTGAGACGCCCCAGTTTGGCCCCACAAGCATCTGGGTCGCCAGCGGCTCAGCTCGTAGTGCTCGGTCTAGGCGGGCTATGGGTCCCACCAGAGTATGCAAGGTCACCCACCCTGTACGGCCCACCCGCCACGTCACATCCGCCTTCCCACCTCTACACCCCGGCTCCAGTGCCGCAAGAATATTATACGAGAACGATAGCGCCGCCGCATCTGCAGCAACATCATCATCAGGTGCATTTATACAAGGGGGAGCCCACGAAGGCGGCCCAAATCTCGCCGGCTTCGGAGGTGAGGGACACGGCGGAGAGATCGGAGAGCTTGGAGGAGGAGAAATCGGAGGGCGGTCAAAATGGCGAGGACAGAAGAATTAAAGGGAGAGGATCGTGGGGGCGGAGATTGGAGGGTGAAGAAAGTAATAGAAGTGAAGTCAGTCTGAAATTCTGAAGAGTTAAATAATATAATAATAGCGTAATTTGCGTATAATTAAAATCACATAAATTTTTTGGTTGGTTGGTTGGTTTTGTTTTTTTTTTAACGGATGTTTAGTTAGCCGATGCCTCCTTGAATTAAGGAGAAATAAAGCAAAAATGTTTGGTGGATATGTAATTAATTA

mRNA sequence

ATGGCGTCTACTCAGCTCAGCTTGGAATGTCAAGTTCAAAGCTATTCCATGCTGCTTCAATATTCTTTTGGAGACCAACACCAAGTGGCGCCTAATTCTGATGACTTCTATTATAAGCTTCAGGAATTCGTTTCTCGCCTTGAACAAGAGCGCCTTAAAATTGATGTCTTCAAACGGGAGCTTCCCCTTTGTATGCAGCTTTTGACCAACGCTGTGGAGACGTCCAGGAGACAGCTGCAGGCCTGCAAGGCAATAGAGCCGCCGCCATCCAAGCCGGTTTTGGAAGAATTCATGCCGCTCAAAAACTCCACAACGGTGGATGATGAAAAGCCGCCCGCAATATTATCGGATAAGGCAAATTGGATGACGTCACTTCAGCTTTGGAGTCAAGCAAATAAGGAATATACTACTGATCCACCTCATTCCCATAATAATAACAATAATTCAGACACTCCTAAACAGAGAGTTAGTAATGGAGCTTTTGTTCCGTTCGATAAAGATCGAAACTTGGAGCCGGGTTTGGGTGTTGGCGGAGGCGGCGTGAATGGGGTGGCGGCGGAAATGGAGTTACTGGAGAAAGGTGAGAAGAAGGAGAAGAAGAATCATTGTGGTGATACTAATAATAACGTTGATGGTGGGATCGTAACGGCGACGGAGGACAGGGCTGAACGTGGAGCAGGGGAGGTGGGATTGGCTCCAACAACAACGAGTTCAACTACTACTCAGACACACCGGAAGGCTAGACGATGCTGGTCGCCGGACTTGCACCGGAGATTCGTCAATGCTCTTCAGATGCTTGGTGGCTCTCAAGTTGCGACACCAAAGCAGATAAGAGAGTTGATGAAAGTAGACGGTTTGACGAACGATGAAGTAAAAAGCCATCTCCAGAAATACCGGCTCCACACAGTGAGACGCCCCAGTTTGGCCCCACAAGCATCTGGGTCGCCAGCGGCTCAGCTCGTAGTGCTCGGTCTAGGCGGGCTATGGGTCCCACCAGAGTATGCAAGGTCACCCACCCTGTACGGCCCACCCGCCACGTCACATCCGCCTTCCCACCTCTACACCCCGGCTCCAGTGCCGCAAGAATATTATACGAGAACGATAGCGCCGCCGCATCTGCAGCAACATCATCATCAGGTGCATTTATACAAGGGGGAGCCCACGAAGGCGGCCCAAATCTCGCCGGCTTCGGAGGTGAGGGACACGGCGGAGAGATCGGAGAGCTTGGAGGAGGAGAAATCGGAGGGCGGTCAAAATGGCGAGGACAGAAGAATTAAAGGGAGAGGATCGTGGGGGCGGAGATTGGAGGGTGAAGAAAGTAATAGAAGTGAAGTCAGTCTGAAATTCTGAAGAGTTAAATAATATAATAATAGCGTAATTTGCGTATAATTAAAATCACATAAATTTTTTGGTTGGTTGGTTGGTTTTGTTTTTTTTTTAACGGATGTTTAGTTAGCCGATGCCTCCTTGAATTAAGGAGAAATAAAGCAAAAATGTTTGGTGGATATGTAATTAATTA

Coding sequence (CDS)

ATGGCGTCTACTCAGCTCAGCTTGGAATGTCAAGTTCAAAGCTATTCCATGCTGCTTCAATATTCTTTTGGAGACCAACACCAAGTGGCGCCTAATTCTGATGACTTCTATTATAAGCTTCAGGAATTCGTTTCTCGCCTTGAACAAGAGCGCCTTAAAATTGATGTCTTCAAACGGGAGCTTCCCCTTTGTATGCAGCTTTTGACCAACGCTGTGGAGACGTCCAGGAGACAGCTGCAGGCCTGCAAGGCAATAGAGCCGCCGCCATCCAAGCCGGTTTTGGAAGAATTCATGCCGCTCAAAAACTCCACAACGGTGGATGATGAAAAGCCGCCCGCAATATTATCGGATAAGGCAAATTGGATGACGTCACTTCAGCTTTGGAGTCAAGCAAATAAGGAATATACTACTGATCCACCTCATTCCCATAATAATAACAATAATTCAGACACTCCTAAACAGAGAGTTAGTAATGGAGCTTTTGTTCCGTTCGATAAAGATCGAAACTTGGAGCCGGGTTTGGGTGTTGGCGGAGGCGGCGTGAATGGGGTGGCGGCGGAAATGGAGTTACTGGAGAAAGGTGAGAAGAAGGAGAAGAAGAATCATTGTGGTGATACTAATAATAACGTTGATGGTGGGATCGTAACGGCGACGGAGGACAGGGCTGAACGTGGAGCAGGGGAGGTGGGATTGGCTCCAACAACAACGAGTTCAACTACTACTCAGACACACCGGAAGGCTAGACGATGCTGGTCGCCGGACTTGCACCGGAGATTCGTCAATGCTCTTCAGATGCTTGGTGGCTCTCAAGTTGCGACACCAAAGCAGATAAGAGAGTTGATGAAAGTAGACGGTTTGACGAACGATGAAGTAAAAAGCCATCTCCAGAAATACCGGCTCCACACAGTGAGACGCCCCAGTTTGGCCCCACAAGCATCTGGGTCGCCAGCGGCTCAGCTCGTAGTGCTCGGTCTAGGCGGGCTATGGGTCCCACCAGAGTATGCAAGGTCACCCACCCTGTACGGCCCACCCGCCACGTCACATCCGCCTTCCCACCTCTACACCCCGGCTCCAGTGCCGCAAGAATATTATACGAGAACGATAGCGCCGCCGCATCTGCAGCAACATCATCATCAGGTGCATTTATACAAGGGGGAGCCCACGAAGGCGGCCCAAATCTCGCCGGCTTCGGAGGTGAGGGACACGGCGGAGAGATCGGAGAGCTTGGAGGAGGAGAAATCGGAGGGCGGTCAAAATGGCGAGGACAGAAGAATTAAAGGGAGAGGATCGTGGGGGCGGAGATTGGAGGGTGAAGAAAGTAATAGAAGTGAAGTCAGTCTGAAATTCTGA

Protein sequence

MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKANWMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGGVNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVPQEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNGEDRRIKGRGSWGRRLEGEESNRSEVSLKF

Homology

[Close]

BLAST of Carg12167-RA vs. NCBI nr
Match: KAG7021820.1 (Myb family transcription factor EFM, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 886.3 bits (2289), Expect = 1.1e-253
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG
Sbjct: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT
Sbjct: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP
Sbjct: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 449

[Close]

BLAST of Carg12167-RA vs. NCBI nr
Match: KAG6587933.1 (Myb family transcription factor EFM, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 862.8 bits (2228), Expect = 1.3e-246
Identity = 441/449 (98.22%), Postives = 441/449 (98.22%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNST VDDEKPPAILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTMVDDEKPPAILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEYTTDPPHSHNNN NSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG
Sbjct: 121 WMTSLQLWSQANKEYTTDPPHSHNNNYNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT
Sbjct: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDE      KYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDE------KYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP
Sbjct: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 443

[Close]

BLAST of Carg12167-RA vs. NCBI nr
Match: XP_023531262.1 (myb family transcription factor EFM-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531263.1 myb family transcription factor EFM-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 846.7 bits (2186), Expect = 9.5e-242
Identity = 435/449 (96.88%), Postives = 436/449 (97.10%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQV PNS DFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVPPNSHDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKAIE PPSKPVLE+FMPLKNSTT DDEKPP ILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKAIEAPPSKPVLEQFMPLKNSTTPDDEKPPTILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEY TDPPHSHNNNNNSDT KQRVSNG FVPFDKDRNLEPGLGVGGGG
Sbjct: 121 WMTSLQLWSQANKEY-TDPPHSHNNNNNSDTRKQRVSNGDFVPFDKDRNLEPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVT TEDRAERGAGEVGLAP TTSSTT
Sbjct: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTPTEDRAERGAGEVGLAP-TTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
            QTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 AQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSH YTPA VP
Sbjct: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHFYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 447

[Close]

BLAST of Carg12167-RA vs. NCBI nr
Match: XP_022925860.1 (myb family transcription factor EFM-like [Cucurbita moschata] >XP_022925867.1 myb family transcription factor EFM-like [Cucurbita moschata])

HSP 1 Score: 845.5 bits (2183), Expect = 2.1e-241
Identity = 434/449 (96.66%), Postives = 439/449 (97.77%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNS DFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSHDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKA+E PPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKAMEAPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEY TDPPHSHNNN+NSDTPKQRVSNGAFVPFDKDRNLEPGLGVGG G
Sbjct: 121 WMTSLQLWSQANKEY-TDPPHSHNNNDNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGSG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEK+EKKNHCGDTNN+VDGGIVTATEDR ERGAGEVGLAP T SSTT
Sbjct: 181 VNGVAAEMELLEKGEKEEKKNHCGDTNNSVDGGIVTATEDRTERGAGEVGLAP-TMSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRP LAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPA VP
Sbjct: 301 HTVRRPGLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           E+RRI GRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 ENRRIIGRGSWGRRLEGEESNRSEVSLKF 447

[Close]

BLAST of Carg12167-RA vs. NCBI nr
Match: XP_023531264.1 (myb family transcription factor EFM-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 824.3 bits (2128), Expect = 5.0e-235
Identity = 427/449 (95.10%), Postives = 429/449 (95.55%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQV PNS DFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVPPNSHDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPL       +VETSRRQLQACKAIE PPSKPVLE+FMPLKNSTT DDEKPP ILSDKAN
Sbjct: 61  LPL-------SVETSRRQLQACKAIEAPPSKPVLEQFMPLKNSTTPDDEKPPTILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEY TDPPHSHNNNNNSDT KQRVSNG FVPFDKDRNLEPGLGVGGGG
Sbjct: 121 WMTSLQLWSQANKEY-TDPPHSHNNNNNSDTRKQRVSNGDFVPFDKDRNLEPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVT TEDRAERGAGEVGLAP TTSSTT
Sbjct: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTPTEDRAERGAGEVGLAP-TTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
            QTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 AQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSH YTPA VP
Sbjct: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHFYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 440

[Close]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot
Match: Q9ZQ85 (Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 5.5e-75
Identity = 216/484 (44.63%), Postives = 272/484 (56.20%), Query Frame = 0


Query: 2   ASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKREL 61
           +S++LSL+C+ QSYSMLL+ SFGD  Q    SD   +KL++ +SRLEQERLKID FKREL
Sbjct: 3   SSSELSLDCKPQSYSMLLK-SFGDNFQ----SDPTTHKLEDLLSRLEQERLKIDAFKREL 62

Query: 62  PLCMQLLTNAVETSRRQLQACKA-----IEPPPSKPVLEEFMPLKNSTTVDDEKPPAILS 121
           PLCMQLL NAVE  ++QL+A +A      +   ++PVLEEF+PL+N       +P    +
Sbjct: 63  PLCMQLLNNAVEVYKQQLEAYRANSNNNNQSVGTRPVLEEFIPLRN-------QPEKTNN 122

Query: 122 DKANWMTSLQLWSQA-----NKEYTTDPPHSHNNNNNSD-----TPKQRVSNGAFVPFDK 181
             +NWMT+ QLWSQ+     N + TTD     +  N+S        KQR  +GAF+PF K
Sbjct: 123 KGSNWMTTAQLWSQSETKPKNIDSTTDQSLPKDEINSSPKLGHFDAKQRNGSGAFLPFSK 182

Query: 182 DRNLEPGLGVG---------GGGVNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTA 241
           +++L P L +              NG     E +   +     N+  ++N+N        
Sbjct: 183 EQSL-PELALSTEVKRVSPTNEHTNGQDGNDESMINNDNNYNNNNNNNSNSN-------- 242

Query: 242 TEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQI 301
                              SSTT+Q++RKARRCWSPDLHRRFV ALQMLGGSQVATPKQI
Sbjct: 243 -----------------GVSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQI 302

Query: 302 RELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYAR- 361
           RELMKVDGLTNDEVKSHLQKYRLHT RRPS +PQ SG P   LVV  LGG+WVPPEY   
Sbjct: 303 RELMKVDGLTNDEVKSHLQKYRLHT-RRPSPSPQTSGGPGPHLVV--LGGIWVPPEYTSA 362

Query: 362 ---SPTLYGPPATSHPPSHLYTPAPVP------QEYYTRTIAPPHLQQHHHQVHLYKGEP 421
              +PTLY      H   H  T  P P      QE+Y  T  PP    HHH    + G  
Sbjct: 363 HGGTPTLYHHQVHHH---HTNTAGPPPPHFCSSQEFY--TTPPPPQPLHHHHFQTFNGSS 422

Query: 422 TKAAQI-SPASEVRDTAERSESLEEEKSEGGQNGEDRRIKGRGSWGRRLEGEES-NRSEV 450
              A   S   +V D    S ++E +  E G  G +R  KG  +     E   + N SE+
Sbjct: 423 GGTASTDSTHHQVTD----SPTVEGKSPESG--GGER--KGLAALREECEDHSNINGSEI 432

[Close]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot
Match: Q5VRW2 (Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=1 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-58
Identity = 188/471 (39.92%), Postives = 233/471 (49.47%), Query Frame = 0


Query: 29  VAPNSDDFYYKLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQLQA------- 88
           VA  S     KLQEF+SRLE+ERLKID FKRELPLCMQLL +A+E  R+QL+A       
Sbjct: 19  VAAASGQATQKLQEFLSRLEEERLKIDAFKRELPLCMQLLNHAMEAYRQQLEAYQMGSQH 78

Query: 89  -CKAIEPPPSKPVLEEFMPLKN---STTVDDEKPPA----ILSDKANWMTSLQLWSQANK 148
              A     +  VLEEF+P+KN        D+   A    + S+KA+WM S QLW+    
Sbjct: 79  SAAAAAAARAPLVLEEFIPVKNIGIDVVAADKAAAAGGNSVSSEKASWMVSAQLWNAPAS 138

Query: 149 EYTTD-------PPHSHNNNNNSDTPKQRVS--------NGAFVPFDKDRNLEPGLGVGG 208
               D        P  H+ ++  DT  + ++         GAF+PF KD  +  G     
Sbjct: 139 ASAADTAAKGPQTPKEHSEHHPLDTSPKLITALDGGGGGGGAFLPFSKDNAMGDGSAAAA 198

Query: 209 GGVNGV-------AAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGL 268
             +  +       AA+   +  GE  +KK +  D         V A    A+ G    G 
Sbjct: 199 AALPELALAPAEKAADAITIAAGE-VDKKPYAHDNG-------VVARSREAQNG----GK 258

Query: 269 APTTTSS-----TTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGL 328
            P+T S         Q HRKARRCWSP+LHRRFVNALQ+LGG+QVATPKQIRELMKVDGL
Sbjct: 259 PPSTPSDGQAVPPPPQPHRKARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGL 318

Query: 329 TNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEY---ARSPTLYGP 388
           TNDEVKSHLQKYRLHT RRP  +P    +   QLVV  LGG+WVPPEY   A  P +YG 
Sbjct: 319 TNDEVKSHLQKYRLHT-RRPMPSPAPPTAATPQLVV--LGGIWVPPEYATQAAGPAIYGA 378

Query: 389 PATSHPPSHLYTPAPVPQEYYTRTIAPPHLQQH-------HHQVHLYKGEPTKAAQISPA 445
              + P    YT A   QEYY       HLQ H       HH+            Q++P 
Sbjct: 379 HPATQPH---YTAAVAAQEYYHH--HHHHLQHHPAAAALVHHRAVAPPPPLPPQQQLAPP 438

[Close]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot
Match: Q6Z869 (Transcription factor NIGT1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIGT1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 139/348 (39.94%), Postives = 179/348 (51.44%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQLQACKAIEP-----PPSKPV 98
           + +E++  LE+ER KI VF+RELPLC  L+T  +E  R Q+ A  + E      PP  PV
Sbjct: 14  RCREYLLALEEERRKIQVFQRELPLCFDLVTQTIEGMRSQMDAAGSEETVSDQGPP--PV 73

Query: 99  LEEFMPLK----------NSTTVDDEK-------------------PPAILSDKANWMTS 158
           LEEF+PLK           ST  D  K                   PP       +W+ S
Sbjct: 74  LEEFIPLKPSLSLSSSEEESTHADAAKSGKKEEAETSERHSSPPPPPPEAKKVTPDWLQS 133

Query: 159 LQLWSQANKEYTTDPPHSHNNNNNSDTP------KQRVSNGAFVPFDKDRNLEPGLGVGG 218
           +QLWSQ   +     P S +     D P        R + GAF PF+K++  E    +  
Sbjct: 134 VQLWSQEEPQ----QPSSPSPTPTKDLPCKPVALNARKAGGAFQPFEKEKRAE----LPA 193

Query: 219 GGVNGVAAEMELLEKGEK----KEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPT 278
                 A+   + + G+K      +K+   D +N+ D       +D+ + G         
Sbjct: 194 SSTTAAASSTVVGDSGDKPTDDDTEKHMETDKDNDKD------AKDKDKEG--------- 253

Query: 279 TTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSH 336
                 +Q HRK RRCW+P+LHRRF+ ALQ LGGS VATPKQIRELMKVDGLTNDEVKSH
Sbjct: 254 -----QSQPHRKPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSH 313

[Close]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot
Match: Q8VZS3 (Transcription factor HHO2 OS=Arabidopsis thaliana OX=3702 GN=HHO2 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.5e-43
Identity = 130/351 (37.04%), Postives = 183/351 (52.14%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQL---------QACKAIEPPP 98
           K  E+V  LE+E+ KI VF+RELPLC++L+T A+E  R++L         Q  +      
Sbjct: 13  KCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIEACRKELSGTTTTTSEQCSEQTTSVC 72

Query: 99  SKPVLEEFMPLKNSTTVDDE-------------KPPAILSDKANWMTSLQLWSQANKEYT 158
             PV EEF+P+K  +++ +E              P  + + K++W+ S+QLW+ +     
Sbjct: 73  GGPVFEEFIPIKKISSLCEEVQEEEEEDGEHESSPELVNNKKSDWLRSVQLWNHS----P 132

Query: 159 TDPPHSHNNNNNSDTPKQRVSNGAFVPFDK---DRNLEPGLGVGGGGVNGVAAEMELLEK 218
              P        +   + +  +GAF PF K   + +L+P +         VA+ M     
Sbjct: 133 DLNPKEERVAKKAKVVEVKPKSGAFQPFQKRVLETDLQPAV--------KVASSMPATTT 192

Query: 219 GEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSP 278
               E    CG  ++ +  G     E R E+              + + THRK RRCWSP
Sbjct: 193 SSTTET---CGGKSDLIKAG---DEERRIEQ------------QQSQSHTHRKQRRCWSP 252

Query: 279 DLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRP---SLAP 338
           +LHRRF+NALQ LGGS VATPKQIR+ MKVDGLTNDEVKSHLQKYRLHT RRP   S+A 
Sbjct: 253 ELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHT-RRPAATSVAA 312

Query: 339 QASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVPQ 362
           Q++G+      V+ +GG+WVP     S   + PP+       +Y P  V Q
Sbjct: 313 QSTGNQQQPQFVV-VGGIWVP-----SSQDFPPPSDVANKGGVYAPVAVAQ 326

[Close]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot
Match: Q9FPE8 (Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-42
Identity = 122/339 (35.99%), Postives = 170/339 (50.15%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQL-----------QACKAIEP 98
           +  E+V  LE+E+ KI VF+RELPLC++L+T A+E+ R++L           +  +    
Sbjct: 17  RCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIESCRKELSESSEHVGGQSECSERTTS 76

Query: 99  PPSKPVLEEFMPLKNSTTVDD--------EKPPAILSD-------KANWMTSLQLWSQAN 158
                V EEFMP+K S+   D        EK   + ++       K++W+ S+QLW+Q+ 
Sbjct: 77  ECGGAVFEEFMPIKWSSASSDETDKDEEAEKTEMMTNENNDGDKKKSDWLRSVQLWNQS- 136

Query: 159 KEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGGVNGVAAEMELLE 218
                  P    NN      + + S GAF PF K++                AA+ + L 
Sbjct: 137 -------PDPQPNNKKPMVIEVKRSAGAFQPFQKEK--------------PKAADSQPLI 196

Query: 219 KGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWS 278
           K            T   V GG     E++ +                 + ++RK RRCWS
Sbjct: 197 KAITPTSTTTTSSTAETVGGG--KEFEEQKQ-----------------SHSNRKQRRCWS 256

Query: 279 PDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQA 338
           P+LHRRF++ALQ LGGS VATPKQIR+LMKVDGLTNDEVKSHLQKYRLHT R  +   + 
Sbjct: 257 PELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTRRPATPVVRT 314

Query: 339 SGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPS 352
            G    Q   + + G+WVP     +  +Y P AT  P S
Sbjct: 317 GGENPQQRQFMVMEGIWVPSHDTTNNRVYAPVATQPPQS 314

[Close]

BLAST of Carg12167-RA vs. ExPASy TrEMBL
Match: A0A6J1ECS7 (myb family transcription factor EFM-like OS=Cucurbita moschata OX=3662 GN=LOC111433139 PE=4 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 1.0e-241
Identity = 434/449 (96.66%), Postives = 439/449 (97.77%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNS DFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSHDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKA+E PPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKAMEAPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWSQANKEY TDPPHSHNNN+NSDTPKQRVSNGAFVPFDKDRNLEPGLGVGG G
Sbjct: 121 WMTSLQLWSQANKEY-TDPPHSHNNNDNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGSG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           VNGVAAEMELLEKGEK+EKKNHCGDTNN+VDGGIVTATEDR ERGAGEVGLAP T SSTT
Sbjct: 181 VNGVAAEMELLEKGEKEEKKNHCGDTNNSVDGGIVTATEDRTERGAGEVGLAP-TMSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRP LAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPA VP
Sbjct: 301 HTVRRPGLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
           QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG
Sbjct: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           E+RRI GRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 ENRRIIGRGSWGRRLEGEESNRSEVSLKF 447

[Close]

BLAST of Carg12167-RA vs. ExPASy TrEMBL
Match: A0A6J1IEN2 (myb family transcription factor EFM-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472005 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.3e-232
Identity = 421/449 (93.76%), Postives = 427/449 (95.10%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLEC+VQSYSMLLQYSFGDQHQV PNSDDFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECKVQSYSMLLQYSFGDQHQVPPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPLCMQLLTNAVETSRRQLQACKA E PPSKPVLEEFMPLKNSTT DDEKPP ILSDKAN
Sbjct: 61  LPLCMQLLTNAVETSRRQLQACKASEAPPSKPVLEEFMPLKNSTTPDDEKPPTILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWS+ANKEY TDPPHSH NNNNSDT KQRVSNGAFVPF+KDR+L PGLGVGGGG
Sbjct: 121 WMTSLQLWSRANKEY-TDPPHSH-NNNNSDTRKQRVSNGAFVPFNKDRSLGPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           V GVA EMELLEKGEKKEKKNHCGDTNNNVDGGI+TATEDRAERG GEVGLAP TTSSTT
Sbjct: 181 VKGVAVEMELLEKGEKKEKKNHCGDTNNNVDGGILTATEDRAERGTGEVGLAP-TTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNAL+MLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALRMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRP LA QASGSPAA LVVLGLGGLWVPPEYARSPTLYGPPATSHPPSH YTPA VP
Sbjct: 301 HTVRRPGLATQASGSPAAHLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHFYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
            EYYTRTIAPPHLQQHHHQVHLYKGE TKAAQ SPASEVRDTAERSE LEEEKSEGGQNG
Sbjct: 361 HEYYTRTIAPPHLQQHHHQVHLYKGESTKAAQSSPASEVRDTAERSEILEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 446

[Close]

BLAST of Carg12167-RA vs. ExPASy TrEMBL
Match: A0A6J1IBF2 (myb family transcription factor EFM-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472005 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.7e-225
Identity = 413/449 (91.98%), Postives = 420/449 (93.54%), Query Frame = 0


Query: 1   MASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60
           MASTQLSLEC+VQSYSMLLQYSFGDQHQV PNSDDFYYKLQEFVSRLEQERLKIDVFKRE
Sbjct: 1   MASTQLSLECKVQSYSMLLQYSFGDQHQVPPNSDDFYYKLQEFVSRLEQERLKIDVFKRE 60

Query: 61  LPLCMQLLTNAVETSRRQLQACKAIEPPPSKPVLEEFMPLKNSTTVDDEKPPAILSDKAN 120
           LPL       +VETSRRQLQACKA E PPSKPVLEEFMPLKNSTT DDEKPP ILSDKAN
Sbjct: 61  LPL-------SVETSRRQLQACKASEAPPSKPVLEEFMPLKNSTTPDDEKPPTILSDKAN 120

Query: 121 WMTSLQLWSQANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGG 180
           WMTSLQLWS+ANKEY TDPPHSH NNNNSDT KQRVSNGAFVPF+KDR+L PGLGVGGGG
Sbjct: 121 WMTSLQLWSRANKEY-TDPPHSH-NNNNSDTRKQRVSNGAFVPFNKDRSLGPGLGVGGGG 180

Query: 181 VNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTT 240
           V GVA EMELLEKGEKKEKKNHCGDTNNNVDGGI+TATEDRAERG GEVGLAP TTSSTT
Sbjct: 181 VKGVAVEMELLEKGEKKEKKNHCGDTNNNVDGGILTATEDRAERGTGEVGLAP-TTSSTT 240

Query: 241 TQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300
           TQTHRKARRCWSPDLHRRFVNAL+MLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL
Sbjct: 241 TQTHRKARRCWSPDLHRRFVNALRMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 300

Query: 301 HTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVP 360
           HTVRRP LA QASGSPAA LVVLGLGGLWVPPEYARSPTLYGPPATSHPPSH YTPA VP
Sbjct: 301 HTVRRPGLATQASGSPAAHLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHFYTPASVP 360

Query: 361 QEYYTRTIAPPHLQQHHHQVHLYKGEPTKAAQISPASEVRDTAERSESLEEEKSEGGQNG 420
            EYYTRTIAPPHLQQHHHQVHLYKGE TKAAQ SPASEVRDTAERSE LEEEKSEGGQNG
Sbjct: 361 HEYYTRTIAPPHLQQHHHQVHLYKGESTKAAQSSPASEVRDTAERSEILEEEKSEGGQNG 420

Query: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 450
           EDRRIKGRGSWGRRLEGEESNRSEVSLKF
Sbjct: 421 EDRRIKGRGSWGRRLEGEESNRSEVSLKF 439

[Close]

BLAST of Carg12167-RA vs. ExPASy TrEMBL
Match: A0A0A0LX10 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G408200 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 6.1e-146
Identity = 315/486 (64.81%), Postives = 351/486 (72.22%), Query Frame = 0


Query: 2   ASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKREL 61
           ++ +LSLEC V+SYSMLL+YSFGD H    + D  Y KLQ+FVSRLE+ERLKIDVFKREL
Sbjct: 6   STAELSLECTVESYSMLLKYSFGDHH----DHDQSYDKLQDFVSRLEEERLKIDVFKREL 65

Query: 62  PLCMQLLTNAVETSRRQLQACKAIEP-----PPSKPVLEEFMPLKNSTTVDDEKPPAILS 121
           PLCMQLLTNAVETSRRQLQACK +E       P++P+LEEFMPLKNST  +DEKP  I S
Sbjct: 66  PLCMQLLTNAVETSRRQLQACKTMEAAAAVGAPTEPILEEFMPLKNSTPAEDEKPTTITS 125

Query: 122 DKANWMTSLQLWSQA------NKEYTTD-----PPHSHNNNNNSD----TPKQRV-SNGA 181
           DKANWMTS+QLWSQA        E T D       +++NNNNN D    T  QR+ +NGA
Sbjct: 126 DKANWMTSVQLWSQAGDVSKQQSESTDDHSKLQDRNNNNNNNNKDNNLETCSQRINNNGA 185

Query: 182 FVPFDKDRNLEPGLGVGGGGVNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVT-ATE 241
           FVPF+KDR+            +G AA+MELLEKGEKK    +C D N+++DGG+V  A E
Sbjct: 186 FVPFNKDRS------------SGPAAKMELLEKGEKK----NCSDNNSSIDGGVVVMAAE 245

Query: 242 DRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRE 301
            R+E GA EVG  P     TTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRE
Sbjct: 246 QRSENGAAEVGSGP-----TTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRE 305

Query: 302 LMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARS-- 361
           LMKVDGLTNDEVKSHLQKYRLHT RRP    QASG PAAQLVVLGLGGLWVPPEYA +  
Sbjct: 306 LMKVDGLTNDEVKSHLQKYRLHT-RRPGPTQQASGPPAAQLVVLGLGGLWVPPEYAAAAA 365

Query: 362 --PTLYGPPATSHPPSHLYTPAPVPQEYYTRTIAPPHLQ---QHHHQVHLYKGEPTKAAQ 421
             P LYGP A SHPPSH YT    P E+Y RT  PPHLQ    HHHQV LYKG P +A Q
Sbjct: 366 APPALYGPAAPSHPPSHFYT----PPEFYARTAPPPHLQHHHHHHHQVQLYKGAPPQATQ 425

Query: 422 ISPASEVRDTAERSESLEEEKS-------EGGQNGEDRRIKGRGSWGRRLE--GEESNRS 450
            SP SEVRDTAERSES EEEKS       EGG+N       GRGS GRR E   E +NRS
Sbjct: 426 SSPESEVRDTAERSESFEEEKSGSSSWRIEGGEN-------GRGSCGRRSEENEESNNRS 454

[Close]

BLAST of Carg12167-RA vs. ExPASy TrEMBL
Match: A0A1S3CJ16 (transcription activator GLK1-like OS=Cucumis melo OX=3656 GN=LOC103501521 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 6.1e-146
Identity = 311/479 (64.93%), Postives = 348/479 (72.65%), Query Frame = 0


Query: 2   ASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKREL 61
           ++ +LSLEC+V+SYSMLL+YSFGD H    + D  Y KLQ+FVSRLE+ERLKIDVFKREL
Sbjct: 6   STAELSLECKVESYSMLLKYSFGDHH----DHDQSYDKLQDFVSRLEEERLKIDVFKREL 65

Query: 62  PLCMQLLTNAVETSRRQLQACKAIE-----PPPSKPVLEEFMPLKNSTTVDDEKPPAILS 121
           PLCMQLLTNAVETSRRQLQACK +E       P++P+LEEFMPLKNST  +DEK P I S
Sbjct: 66  PLCMQLLTNAVETSRRQLQACKTMEAAAAAAAPTEPILEEFMPLKNSTPAEDEKTPTITS 125

Query: 122 DKANWMTSLQLWSQA-------NKEYTTDPPH----SHNNNNNSDTPKQRVSN-GAFVPF 181
           DKANWMTS+QLWSQA         E T D       ++N +NN +T  QR++N GAFVPF
Sbjct: 126 DKANWMTSVQLWSQAGDVISKQQSESTDDHSKLQDCNNNKDNNLETCSQRINNSGAFVPF 185

Query: 182 DKDRNLEPGLGVGGGGVNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAER 241
           +KDR+            +G AA+MELLEKGEKK    +C D N+N+DGG+V A E R+E 
Sbjct: 186 NKDRS------------SGPAAKMELLEKGEKK----NCSDNNSNIDGGVVMAAEQRSEN 245

Query: 242 GAGEVGLAPTTTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVD 301
           GA E G AP     TTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVD
Sbjct: 246 GAAEAGSAP-----TTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVD 305

Query: 302 GLTNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYARS----PTL 361
           GLTNDEVKSHLQKYRLHT RRP    QASG PAAQLVVLGLGGLWVPPEYA +    P L
Sbjct: 306 GLTNDEVKSHLQKYRLHT-RRPGPTQQASGPPAAQLVVLGLGGLWVPPEYAAAAAAPPAL 365

Query: 362 YGPPATSHPPSHLYTPAPVPQEYYTRTIAPPHLQ-QHHHQVHLYKGEPTKAAQISPASEV 421
           YGP ATSHP SH YT    P E+Y RT   PHLQ  HHHQV LYKG P +A Q SP SEV
Sbjct: 366 YGPAATSHPASHFYT----PPEFYARTAPAPHLQHHHHHQVQLYKGAPPQATQSSPESEV 425

Query: 422 RDTAERSESLEEEKS-------EGGQNGEDRRIKGRGSWGRRLE--GEESNRSEVSLKF 450
           RDTAERSES EEEKS       EGG+N        RGS GRR E   E +NRSE++LKF
Sbjct: 426 RDTAERSESFEEEKSGSTSWRIEGGEN-------ARGSCGRRSEENEESNNRSEITLKF 447

[Close]

BLAST of Carg12167-RA vs. TAIR 10
Match: AT2G03500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 283.1 bits (723), Expect = 3.9e-76
Identity = 216/484 (44.63%), Postives = 272/484 (56.20%), Query Frame = 0


Query: 2   ASTQLSLECQVQSYSMLLQYSFGDQHQVAPNSDDFYYKLQEFVSRLEQERLKIDVFKREL 61
           +S++LSL+C+ QSYSMLL+ SFGD  Q    SD   +KL++ +SRLEQERLKID FKREL
Sbjct: 3   SSSELSLDCKPQSYSMLLK-SFGDNFQ----SDPTTHKLEDLLSRLEQERLKIDAFKREL 62

Query: 62  PLCMQLLTNAVETSRRQLQACKA-----IEPPPSKPVLEEFMPLKNSTTVDDEKPPAILS 121
           PLCMQLL NAVE  ++QL+A +A      +   ++PVLEEF+PL+N       +P    +
Sbjct: 63  PLCMQLLNNAVEVYKQQLEAYRANSNNNNQSVGTRPVLEEFIPLRN-------QPEKTNN 122

Query: 122 DKANWMTSLQLWSQA-----NKEYTTDPPHSHNNNNNSD-----TPKQRVSNGAFVPFDK 181
             +NWMT+ QLWSQ+     N + TTD     +  N+S        KQR  +GAF+PF K
Sbjct: 123 KGSNWMTTAQLWSQSETKPKNIDSTTDQSLPKDEINSSPKLGHFDAKQRNGSGAFLPFSK 182

Query: 182 DRNLEPGLGVG---------GGGVNGVAAEMELLEKGEKKEKKNHCGDTNNNVDGGIVTA 241
           +++L P L +              NG     E +   +     N+  ++N+N        
Sbjct: 183 EQSL-PELALSTEVKRVSPTNEHTNGQDGNDESMINNDNNYNNNNNNNSNSN-------- 242

Query: 242 TEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQI 301
                              SSTT+Q++RKARRCWSPDLHRRFV ALQMLGGSQVATPKQI
Sbjct: 243 -----------------GVSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQI 302

Query: 302 RELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQASGSPAAQLVVLGLGGLWVPPEYAR- 361
           RELMKVDGLTNDEVKSHLQKYRLHT RRPS +PQ SG P   LVV  LGG+WVPPEY   
Sbjct: 303 RELMKVDGLTNDEVKSHLQKYRLHT-RRPSPSPQTSGGPGPHLVV--LGGIWVPPEYTSA 362

Query: 362 ---SPTLYGPPATSHPPSHLYTPAPVP------QEYYTRTIAPPHLQQHHHQVHLYKGEP 421
              +PTLY      H   H  T  P P      QE+Y  T  PP    HHH    + G  
Sbjct: 363 HGGTPTLYHHQVHHH---HTNTAGPPPPHFCSSQEFY--TTPPPPQPLHHHHFQTFNGSS 422

Query: 422 TKAAQI-SPASEVRDTAERSESLEEEKSEGGQNGEDRRIKGRGSWGRRLEGEES-NRSEV 450
              A   S   +V D    S ++E +  E G  G +R  KG  +     E   + N SE+
Sbjct: 423 GGTASTDSTHHQVTD----SPTVEGKSPESG--GGER--KGLAALREECEDHSNINGSEI 432

[Close]

BLAST of Carg12167-RA vs. TAIR 10
Match: AT1G68670.1 (myb-like transcription factor family protein )

HSP 1 Score: 176.8 bits (447), Expect = 3.9e-44
Identity = 130/351 (37.04%), Postives = 183/351 (52.14%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQL---------QACKAIEPPP 98
           K  E+V  LE+E+ KI VF+RELPLC++L+T A+E  R++L         Q  +      
Sbjct: 13  KCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIEACRKELSGTTTTTSEQCSEQTTSVC 72

Query: 99  SKPVLEEFMPLKNSTTVDDE-------------KPPAILSDKANWMTSLQLWSQANKEYT 158
             PV EEF+P+K  +++ +E              P  + + K++W+ S+QLW+ +     
Sbjct: 73  GGPVFEEFIPIKKISSLCEEVQEEEEEDGEHESSPELVNNKKSDWLRSVQLWNHS----P 132

Query: 159 TDPPHSHNNNNNSDTPKQRVSNGAFVPFDK---DRNLEPGLGVGGGGVNGVAAEMELLEK 218
              P        +   + +  +GAF PF K   + +L+P +         VA+ M     
Sbjct: 133 DLNPKEERVAKKAKVVEVKPKSGAFQPFQKRVLETDLQPAV--------KVASSMPATTT 192

Query: 219 GEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSP 278
               E    CG  ++ +  G     E R E+              + + THRK RRCWSP
Sbjct: 193 SSTTET---CGGKSDLIKAG---DEERRIEQ------------QQSQSHTHRKQRRCWSP 252

Query: 279 DLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRP---SLAP 338
           +LHRRF+NALQ LGGS VATPKQIR+ MKVDGLTNDEVKSHLQKYRLHT RRP   S+A 
Sbjct: 253 ELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHT-RRPAATSVAA 312

Query: 339 QASGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPSHLYTPAPVPQ 362
           Q++G+      V+ +GG+WVP     S   + PP+       +Y P  V Q
Sbjct: 313 QSTGNQQQPQFVV-VGGIWVP-----SSQDFPPPSDVANKGGVYAPVAVAQ 326

[Close]

BLAST of Carg12167-RA vs. TAIR 10
Match: AT1G25550.1 (myb-like transcription factor family protein )

HSP 1 Score: 173.3 bits (438), Expect = 4.3e-43
Identity = 122/339 (35.99%), Postives = 170/339 (50.15%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQL-----------QACKAIEP 98
           +  E+V  LE+E+ KI VF+RELPLC++L+T A+E+ R++L           +  +    
Sbjct: 17  RCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIESCRKELSESSEHVGGQSECSERTTS 76

Query: 99  PPSKPVLEEFMPLKNSTTVDD--------EKPPAILSD-------KANWMTSLQLWSQAN 158
                V EEFMP+K S+   D        EK   + ++       K++W+ S+QLW+Q+ 
Sbjct: 77  ECGGAVFEEFMPIKWSSASSDETDKDEEAEKTEMMTNENNDGDKKKSDWLRSVQLWNQS- 136

Query: 159 KEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGGVNGVAAEMELLE 218
                  P    NN      + + S GAF PF K++                AA+ + L 
Sbjct: 137 -------PDPQPNNKKPMVIEVKRSAGAFQPFQKEK--------------PKAADSQPLI 196

Query: 219 KGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWS 278
           K            T   V GG     E++ +                 + ++RK RRCWS
Sbjct: 197 KAITPTSTTTTSSTAETVGGG--KEFEEQKQ-----------------SHSNRKQRRCWS 256

Query: 279 PDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQA 338
           P+LHRRF++ALQ LGGS VATPKQIR+LMKVDGLTNDEVKSHLQKYRLHT R  +   + 
Sbjct: 257 PELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTRRPATPVVRT 314

Query: 339 SGSPAAQLVVLGLGGLWVPPEYARSPTLYGPPATSHPPS 352
            G    Q   + + G+WVP     +  +Y P AT  P S
Sbjct: 317 GGENPQQRQFMVMEGIWVPSHDTTNNRVYAPVATQPPQS 314

[Close]

BLAST of Carg12167-RA vs. TAIR 10
Match: AT3G25790.1 (myb-like transcription factor family protein )

HSP 1 Score: 154.5 bits (389), Expect = 2.1e-37
Identity = 111/322 (34.47%), Postives = 158/322 (49.07%), Query Frame = 0


Query: 39  KLQEFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQLQA-----------CKAIEP 98
           K  E++  LE+ER KI+VF+RELPLC++L+T A+E  +R++             C     
Sbjct: 17  KCCEYIEALEEERRKINVFQRELPLCVELVTQAIEAYKREISGTSTDNLYGQSECSEQTT 76

Query: 99  PPSKPVLEEFMPLKNSTTV----------DDEKPPAILSD--------KANWMTSLQLWS 158
                +L+ F+P+K+S+T           DDE+  +  +D        K+ W+ S+QLW+
Sbjct: 77  GECGRILDLFIPIKHSSTSIEEEVDDKDDDDEEHQSHETDIDFDDKNMKSEWLKSVQLWN 136

Query: 159 QANKEYTTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGGVNGVAAEME 218
           Q++            +NN  D  +++                                +E
Sbjct: 137 QSDAVV---------SNNRQDRSQEKTE----------------------------TLVE 196

Query: 219 LLEKGEKKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARR 278
           L++  ++  KK      NNN+    VT ++  +  G G  G              RK RR
Sbjct: 197 LIKINDEAAKK------NNNIKSP-VTTSDGGSGGGGGRRG-------------QRKNRR 256

Query: 279 CWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRPSLA 332
           CWS +LHRRF+NAL+ LGG  VATPKQIR++MKVDGLTNDEVKSHLQKYRLH  R     
Sbjct: 257 CWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQKYRLHARRPSQTT 279

[Close]

BLAST of Carg12167-RA vs. TAIR 10
Match: AT1G13300.1 (myb-like transcription factor family protein )

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-36
Identity = 117/333 (35.14%), Postives = 153/333 (45.95%), Query Frame = 0


Query: 42  EFVSRLEQERLKIDVFKRELPLCMQLLTNAVETSRRQL-----------QACKAIEPPPS 101
           +++  LE+ER KI VF+RELPLC+ L+T A+E  +R+L             C        
Sbjct: 19  QYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMTTENMYGQPECSEQTTGEC 78

Query: 102 KPVLEEFMPLKNSTTVDDEKPPAI---------------LSDKANWMTSLQLWSQANKEY 161
            PVLE+F+ +K+S+T ++E+                    + K++W+ S+QLW+Q     
Sbjct: 79  GPVLEQFLTIKDSSTSNEEEDEEFDDEHGNHDPDNDSEDKNTKSDWLKSVQLWNQ----- 138

Query: 162 TTDPPHSHNNNNNSDTPKQRVSNGAFVPFDKDRNLEPGLGVGGGGVNGVAAEMELLEKGE 221
              P H          PK+       +  D+    +P   V GG             +G 
Sbjct: 139 ---PDHPL-------LPKEERLQQETMTRDESMRKDP--MVNGG-------------EGR 198

Query: 222 KKEKKNHCGDTNNNVDGGIVTATEDRAERGAGEVGLAPTTTSSTTTQTHRKARRCWSPDL 281
           K+E +          DGG                               RK RRCWS  L
Sbjct: 199 KREAEK---------DGG-----------------------------GGRKQRRCWSSQL 258

Query: 282 HRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTVRRPSLAPQASGS 341
           HRRF+NALQ LGG  VATPKQIRE MKVDGLTNDEVKSHLQKYRLHT R     P    S
Sbjct: 259 HRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNGNS 281

Query: 342 PAAQLVVLGLGGLWVP-PEYARSPTLYGPPATS 348
                VV  +GGLWVP  +Y+   T  G   +S
Sbjct: 319 QTQHFVV--VGGLWVPQSDYSTGKTTGGATTSS 281

The following BLAST results are available for this feature:

BLAST of Carg12167-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021820.1	1.1e-253	100.00	Myb family transcription factor EFM, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6587933.1	1.3e-246	98.22	Myb family transcription factor EFM, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023531262.1	9.5e-242	96.88	myb family transcription factor EFM-like isoform X1 [Cucurbita pepo subsp. pepo]...	[more]
XP_022925860.1	2.1e-241	96.66	myb family transcription factor EFM-like [Cucurbita moschata] >XP_022925867.1 my...	[more]
XP_023531264.1	5.0e-235	95.10	myb family transcription factor EFM-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12167-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ85	5.5e-75	44.63	Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 ...	[more]
Q5VRW2	2.1e-58	39.92	Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=...	[more]
Q6Z869	1.6e-45	39.94	Transcription factor NIGT1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIGT1 PE=...	[more]
Q8VZS3	5.5e-43	37.04	Transcription factor HHO2 OS=Arabidopsis thaliana OX=3702 GN=HHO2 PE=1 SV=1	[more]
Q9FPE8	6.1e-42	35.99	Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1	[more]

BLAST of Carg12167-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECS7	1.0e-241	96.66	myb family transcription factor EFM-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IEN2	3.3e-232	93.76	myb family transcription factor EFM-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1IBF2	1.7e-225	91.98	myb family transcription factor EFM-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A0A0LX10	6.1e-146	64.81	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G40820...	[more]
A0A1S3CJ16	6.1e-146	64.93	transcription activator GLK1-like OS=Cucumis melo OX=3656 GN=LOC103501521 PE=4 S...	[more]

BLAST of Carg12167-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03500.1	3.9e-76	44.63	Homeodomain-like superfamily protein	[more]
AT1G68670.1	3.9e-44	37.04	myb-like transcription factor family protein	[more]
AT1G25550.1	4.3e-43	35.99	myb-like transcription factor family protein	[more]
AT3G25790.1	2.1e-37	34.47	myb-like transcription factor family protein	[more]
AT1G13300.1	2.3e-36	35.14	myb-like transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..60
None	No IPR available	GENE3D	1.10.10.60		coord: 245..303 e-value: 1.1E-26 score: 94.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..449
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..449
None	No IPR available	PANTHER	PTHR31003:SF19	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 3..445
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 248..299 e-value: 9.4E-6 score: 25.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 243..303 score: 13.831442
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 246..301 e-value: 1.2E-26 score: 90.7
IPR044787	Myb family transcription factor HRS1-like	PANTHER	PTHR31003	MYB FAMILY TRANSCRIPTION FACTOR	coord: 3..445
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 243..302

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12167	Carg12167	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12167-RA:1	Carg12167-RA:1	exon
Carg12167-RA:2	Carg12167-RA:2	exon
Carg12167-RA:3	Carg12167-RA:3	exon
Carg12167-RA:4	Carg12167-RA:4	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12167-RA:three_prime_utr	Carg12167-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12167-RA:cds	Carg12167-RA:cds_4	CDS
Carg12167-RA:cds	Carg12167-RA:cds_3	CDS
Carg12167-RA:cds	Carg12167-RA:cds_2	CDS
Carg12167-RA:cds	Carg12167-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12167-RA	Carg12167-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity