Carg12151-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12151-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MAPK kinase substrate protein At1g80180-like
Location	Carg_Chr11: 2472492 .. 2472848 (+)
Sequence length	357
RNA-Seq Expression	Carg12151-RA
Synteny	Carg12151-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACACCTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA

mRNA sequence

ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACACCTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA

Coding sequence (CDS)

ATGACGGGCTTACAGAGGTCCGCCGTGTCGTTCCGGCGTCAGGGCTCCTCCGGCTTGGTCTGGGACGACAGATTCTACAGCGGCGAATTGAAACCCACAAAGCGTCACCATGAAGAACACCTTCAACCCGACGCCGTTTCTCTTTCCAAAGAGTTGAGGACTTGTCGCAGCGTCGGATCCACCGCCACCTCTGAAGGAACCCGATCTTCCACCGTCCACCGTATGGAGGTTATATCGCCGTCGCCAACGCCAAGTATGGGGGACCCATCTTCACCGAAGTTCACCGGCTGCGGATTCTGCGGCGTGTTTGGCCGCCCCATCGGCGGGTCTCGCCATCAGAAATCCAACAAACATTGA

Protein sequence

MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGSTATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH

Homology

[Close]

BLAST of Carg12151-RA vs. NCBI nr
Match: KAG6587920.1 (hypothetical protein SDJN03_16485, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021805.1 hypothetical protein SDJN02_15533, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.2 bits (622), Expect = 5.6e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. NCBI nr
Match: XP_023530960.1 (uncharacterized protein At1g15400-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 8.1e-60
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRH+EEHLQPD VSLSKELRTCRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHYEEHLQPDVVSLSKELRTCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. NCBI nr
Match: XP_022933695.1 (uncharacterized protein At1g15400-like [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEE LQPDAVSLSKELRTCRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEQLQPDAVSLSKELRTCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSS VHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSAVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. NCBI nr
Match: XP_022965353.1 (uncharacterized protein At1g15400-like [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 3.4e-58
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRH+EEHLQPD +SLSKELR CRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHYEEHLQPDVLSLSKELRPCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSS VHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSAVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. NCBI nr
Match: XP_023516734.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 7.9e-39
Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           M GLQRSAVSFRRQGSSGLVWDDR++SGEL PT R HEE  Q DA+ LS ELR  R+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRYFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNK 118
            +T E +RSS  HR+E ISPS +PS  +PSSPKFTGCGFCGVFGRPIGG+RH KS +
Sbjct: 61  ASTFERSRSSASHRIEAISPSRSPSAANPSSPKFTGCGFCGVFGRPIGGARHHKSKR 117

[Close]

BLAST of Carg12151-RA vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPT-----KRHHEEHLQPDAVSLSKE---- 60
           M GLQRS +SFRRQGSSG+V+DDR  + EL  +     K   +   QP  +S S E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ------LRTCRSVGST------ATSEGTRSSTVHRME-VISPSPTPSMGDPSSPKFTGCG 112
                 LR  ++ G        + S G  +   HR    +SP+      DP SP+ + CG
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAV-----DPPSPRISSCG 120

[Close]

BLAST of Carg12151-RA vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.2e-06
Identity = 40/128 (31.25%), Postives = 53/128 (41.41%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYS--GELKPTKRHHEEHLQPDAVSL---------- 60
           M GLQRS +SFRRQGSSG+VWDDR  +   +     R  E   Q +   L          
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIAELSQQAANDRKGETLQQDEQAKLITSEVQDQTT 60

Query: 61  ----SKELRTCRSVGSTATSEGTRSSTV-HRMEVISPSPTPSMGDPSSPKFTGCGFCGVF 112
                + L+  R+ G    S       + H       SP     DP SP+ +  G C  F
Sbjct: 61  KPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAV---DPPSPRLSAFGCCSAF 120

[Close]

BLAST of Carg12151-RA vs. ExPASy TrEMBL
Match: A0A6J1F5J7 (uncharacterized protein At1g15400-like OS=Cucurbita moschata OX=3662 GN=LOC111441031 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.8e-60
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEE LQPDAVSLSKELRTCRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEQLQPDAVSLSKELRTCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSS VHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSAVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. ExPASy TrEMBL
Match: A0A6J1HNM7 (uncharacterized protein At1g15400-like OS=Cucurbita maxima OX=3661 GN=LOC111465235 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRH+EEHLQPD +SLSKELR CRSVGS
Sbjct: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHYEEHLQPDVLSLSKELRPCRSVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
           TATSEGTRSS VHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH
Sbjct: 61  TATSEGTRSSAVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 118

[Close]

BLAST of Carg12151-RA vs. ExPASy TrEMBL
Match: A0A6J1JFP4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111485313 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           M GLQRSAVSFRRQGSSGLVW+DRF+SGEL PT R HEE  Q DA+ LS ELR  R+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWEDRFFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNK 118
            +T E +RSS  HR+E ISPS +PS  +PSSPKFTGCGFCGVFGRPIGGSR  KS +
Sbjct: 61  ASTFERSRSSASHRIEAISPSRSPSAANPSSPKFTGCGFCGVFGRPIGGSRQHKSKR 117

[Close]

BLAST of Carg12151-RA vs. ExPASy TrEMBL
Match: A0A6J1H9E8 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111461328 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 85/118 (72.03%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           M GLQRSAVSFRRQGSSGLVWDDRF+SGEL PT R HEE  Q DA+ LS ELR  R+VGS
Sbjct: 1   MAGLQRSAVSFRRQGSSGLVWDDRFFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGS 60

Query: 61  TATSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNKH 119
            +T E +RSS  HR+E ISPS +P+  +PSSPKFTGCGFCGVFGRPIGG+R  KS KH
Sbjct: 61  ASTFERSRSSASHRIEAISPSRSPTAANPSSPKFTGCGFCGVFGRPIGGARQHKS-KH 117

[Close]

BLAST of Carg12151-RA vs. ExPASy TrEMBL
Match: A0A5A7TZI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00370 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35
Identity = 84/119 (70.59%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTCRSVGS 60
           M  LQRSAVSFRRQGSSGLVWDDRF SGELKPTKR HE+  Q + V LS ELR  R VGS
Sbjct: 1   MAELQRSAVSFRRQGSSGLVWDDRFLSGELKPTKRFHED--QHNVVFLSGELRPSRRVGS 60

Query: 61  TA--TSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFTGCGFCGVFGRPIGGSRHQKSNK 118
               + E TRSS  ++M+ ISPSP PS GDPSSPKF GCGFCGVFGRP+GG+R  KSNK
Sbjct: 61  GGGPSFERTRSSGAYKMDAISPSPPPSRGDPSSPKFAGCGFCGVFGRPVGGNRQHKSNK 117

[Close]

BLAST of Carg12151-RA vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 4   LQRSAVSFRRQGSSGLVWDDRFYSGELKPTKRHHEEHLQPDAVSLSKELRTC-RSVGSTA 63
           LQRS  SFRRQGSSGL+W+DRF SGE++  +R  +        S++    T  RS     
Sbjct: 3   LQRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCNDHRDGSMAATTATVKRSASDGG 62

Query: 64  TSEGTRSSTVHRMEVISPSPTPSMGDPSSPKFT--GCGFCGVFGRPIGGSRHQKSNK 118
              G R   +          +P++ DP SPK +  GCGFC +F     G R  +  +
Sbjct: 63  CGHGGRLGEL----------SPAL-DPPSPKISAVGCGFCSLFSS--NGKRRSRGRR 106

[Close]

BLAST of Carg12151-RA vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPT-----KRHHEEHLQPDAVSLSKE---- 60
           M GLQRS +SFRRQGSSG+V+DDR  + EL  +     K   +   QP  +S S E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ------LRTCRSVGST------ATSEGTRSSTVHRME-VISPSPTPSMGDPSSPKFTGCG 112
                 LR  ++ G        + S G  +   HR    +SP+      DP SP+ + CG
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAV-----DPPSPRISSCG 120

[Close]

BLAST of Carg12151-RA vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPT-----KRHHEEHLQPDAVSLSKE---- 60
           M GLQRS +SFRRQGSSG+V+DDR  + EL  +     K   +   QP  +S S E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ------LRTCRSVGST------ATSEGTRSSTVHRME-VISPSPTPSMGDPSSPKFTGCG 112
                 LR  ++ G        + S G  +   HR    +SP+      DP SP+ + CG
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAV-----DPPSPRISSCG 120

[Close]

BLAST of Carg12151-RA vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYSGELKPT-----KRHHEEHLQPDAVSLSKE---- 60
           M GLQRS +SFRRQGSSG+V+DDR  + EL  +     K   +   QP  +S S E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ------LRTCRSVGST------ATSEGTRSSTVHRME-VISPSPTPSMGDPSSPKFTGCG 112
                 LR  ++ G        + S G  +   HR    +SP+      DP SP+ + CG
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAV-----DPPSPRISSCG 120

[Close]

BLAST of Carg12151-RA vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 6.5e-07
Identity = 40/128 (31.25%), Postives = 53/128 (41.41%), Query Frame = 0


Query: 1   MTGLQRSAVSFRRQGSSGLVWDDRFYS--GELKPTKRHHEEHLQPDAVSL---------- 60
           M GLQRS +SFRRQGSSG+VWDDR  +   +     R  E   Q +   L          
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIAELSQQAANDRKGETLQQDEQAKLITSEVQDQTT 60

Query: 61  ----SKELRTCRSVGSTATSEGTRSSTV-HRMEVISPSPTPSMGDPSSPKFTGCGFCGVF 112
                + L+  R+ G    S       + H       SP     DP SP+ +  G C  F
Sbjct: 61  KPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAV---DPPSPRLSAFGCCSAF 120

The following BLAST results are available for this feature:

BLAST of Carg12151-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587920.1	5.6e-61	100.00	hypothetical protein SDJN03_16485, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023530960.1	8.1e-60	98.31	uncharacterized protein At1g15400-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933695.1	1.8e-59	98.31	uncharacterized protein At1g15400-like [Cucurbita moschata]	[more]
XP_022965353.1	3.4e-58	95.76	uncharacterized protein At1g15400-like [Cucurbita maxima]	[more]
XP_023516734.1	7.9e-39	71.79	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12151-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI29	1.4e-06	34.59	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]
Q9SSC1	9.2e-06	31.25	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]

BLAST of Carg12151-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5J7	8.8e-60	98.31	uncharacterized protein At1g15400-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HNM7	1.7e-58	95.76	uncharacterized protein At1g15400-like OS=Cucurbita maxima OX=3661 GN=LOC1114652...	[more]
A0A6J1JFP4	1.9e-38	71.79	MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H9E8	4.2e-38	72.03	MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7TZI7	1.2e-35	70.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg12151-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20100.1	1.1e-09	35.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15400.1	1.0e-07	34.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.2	1.0e-07	34.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.3	1.0e-07	34.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G80180.1	6.5e-07	31.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..106 e-value: 2.1E-25 score: 89.6
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	OS05G0542732 PROTEIN-RELATED	coord: 1..116
None	No IPR available	PANTHER	PTHR33730:SF15	SUBFAMILY NOT NAMED	coord: 1..116

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12151	Carg12151	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12151-RA:1	Carg12151-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12151-RA:cds	Carg12151-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12151-RA	Carg12151-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity