Carg10892-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10892-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	early nodulin-93-like
Location	Carg_Chr05: 11491368 .. 11493721 (+)
Sequence length	731
RNA-Seq Expression	Carg10892-RA
Synteny	Carg10892-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATTTTGGGGAGGAAGATTGAGGGAATCGAGAAACTGCAACAGAAACCAAATGAAAAGAGAAGAAAACAAGAGACTGAGGAGACGCTGGAATTTGGGAAAACCATCAAACTCACTCCTACCACTGAAATCATGTGAGCTTCAATTGCTCAGATTCACTTCATTTCATTAATTCATTCATCTTAAATGTTTATAAATACTCAGCCATTTTTCAATTACACTTCAAACTGAAGCTTCCCTGTTTTTTGATCTTCCAACAATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGGTAAACCTTTCGATCTTTTCTTTTTACAAGAATTTATATGAGGAAAAGAAATTTAATGGGTCTGTTGGATTTTTAGTTGCTCTACTTTGATGATACCACACTGTGATGAATTTGATGAGTTGAGTTGTTGACAGTAGTGAGTGATTGATCATGATGATGGGTTTAAGATTTGGTTTTTTGATAGTGCCTTTTAGGTGTTCGACGAAATTCCCCAAAGAGGGTTTTGTTGTTTTAGCTTCAAGAATGGATTGAAGTAAAAGTAATATGATTGGGGAACCATTTTCAACTTCCTCCACCAACTCTTCTTTTTTAGTTAATTATTTAAGGTAAAAGCTAAAGAGAGATGGGGTGTGATCGATGCGCATGTTGTGTTCTTGACTGATTTGATTGTTTTGATGTATTGGGTTGTGGCCCATGATCCACTTCAGATTTGGTGCCATGAAAATAATTGAACTCTGATGTTGTGTTTTTCAAATCATTCTCTTCACAAATTTGCTTTTATTGATGAACAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCGTAAGTTTCCACCTTCATAATGCACATACAGATCTTTATCTTTCCTTTTCTGAAGAATTTAATCATCAACTGATGTAGATTACCTTAACGCACTACTAGTCATGAATTGATGTGGATACTTTGGTTTTATTGCTGGTGTAATAGCCCAAGTCTCCCGCCACCGCTAGGCTAGTAGATATTATCCTCTTTGGACTTTTTCTGAAGATTTTTAAACAGCATCTACTAGAGAGAGGTTTTCACACCCTTATAAAGAATGCTTCATTCTCCTCCTCAACCGACGTGGGATTTCACAATCCGCCCCTTTTGGAGACAACGTCCTCGCTGGCACTTGTTCCCTTCTCCAATTGACGTGGGACTCCCCAATCCACCCCCCTTCGAGGCTCAGCGTCCTTGCTGACACACCGCCTCGTGTCCACTTCCTTTGGAGCTTAGCCTCCTCGCTGGTACATCGCCCGGTGTTTGGTAACGGTCCAAGCCCATCACTAGTAGATATTGTTCTCTTTGGGCTTTCCCTTTTGGGTTTCCCTCAAGATTATTAAAATGCGTCTACAACAGAGAAGTTTCCACACCCTTATAAAGAATGTTTAGTTCTCTTCCCCAACTTACGGGATCTCACAATTAGCCTACTTTTTATTTTGTTCCCTAAAATTTGTCCCTCCCTATGAAAATTTCTGGATCTTCCGCTAATCAAGATAGAGGCACCATGCAACTGCTCTTTCACCAATCATGGTGGTTGGAGCTAGCTGCTGGCTGGCCACATCCTTCAACCTGAACAATAAGAGACATGTTTGGGAGTGATTTCGAAAGGGTTCGAATCACTTCAATGCATGCTTTTAATCCTTCAAAATCAAATTTGATGGTACAAAACTCGAATATAGAAGTGTAAAATCAACGTGATTTTAGATACTACTAGATTCGAGCTATCCAATCCATAAGTAGAGTTGTTATGATTTTGCAGCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGGTTTATCTTCTTCTTCTTCGTCTTCTTCCCTCTTAGCAGCAGCCAAATCATTTCATATTCTTACATGGATTTTGGAATGGCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGAATTCTCAACCTTCAAATTTGAGTGTGACCATTGGACGAAGCTATAAGGGACTTACACACTTGAAGAAGCTATCCATTTCAATATTAGCTCTTTCAATTTACCCTTCAATCTCGTACTAAGAAAATCTATGTAAATCCCTTTGATGTTCGAATAAAAAAGTGGGTTTTTGGTTATTCGTTTCGTCAATCCTACCTTTTCAAAAGTCT

mRNA sequence

GACATTTTGGGGAGGAAGATTGAGGGAATCGAGAAACTGCAACAGAAACCAAATGAAAAGAGAAGAAAACAAGAGACTGAGGAGACGCTGGAATTTGGGAAAACCATCAAACTCACTCCTACCACTGAAATCATCCATTTTTCAATTACACTTCAAACTGAAGCTTCCCTGTTTTTTGATCTTCCAACAATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGAATTCTCAACCTTCAAATTTGAGTGTGACCATTGGACGAAGCTATAAGGGACTTACACACTTGAAGAAGCTATCCATTTCAATATTAGCTCTTTCAATTTACCCTTCAATCTCGTACTAAGAAAATCTATGTAAATCCCTTTGATGTTCGAATAAAAAAGTGGGTTTTTGGTTATTCGTTTCGTCAATCCTACCTTTTCAAAAGTCT

Coding sequence (CDS)

GACATTTTGGGGAGGAAGATTGAGGGAATCGAGAAACTGCAACAGAAACCAAATGAAAAGAGAAGAAAACAAGAGACTGAGGAGACGCTGGAATTTGGGAAAACCATCAAACTCACTCCTACCACTGAAATCATCCATTTTTCAATTACACTTCAAACTGAAGCTTCCCTGTTTTTTGATCTTCCAACAATGGCGAAGAATTTGGCTCAGGCATTTCTCGAGAGAAACAATTTGGCCTCAAATGACCCAAAAGTGGCCATGGCGAAGCGCTGTGCTAGAGAGGGTGTGATAGCTGGAGCTAAAGCAGCTGCCATTGCAAGTATTGCCACTGCTATTCCCACCCTGGCCAGCGTGAGGATGCTGCCATGGGCAAAAGCTAATCTGAATCACGCAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCAGCTTACTTCATAGTGGCTGACAAGACTGTTCTAGCAACAGCAAGAAGAAACTCCTTCAAGCAAAAACCCAACGCTGAAACATACGAATTCAAGTGA

Protein sequence

DILGRKIEGIEKLQQKPNEKRRKQETEETLEFGKTIKLTPTTEIIHFSITLQTEASLFFDLPTMAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPWAKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK

Homology

[Close]

BLAST of Carg10892-RA vs. NCBI nr
Match: KAG7030400.1 (hypothetical protein SDJN02_08747, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 9.1e-84
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   DILGRKIEGIEKLQQKPNEKRRKQETEETLEFGKTIKLTPTTEIIHFSITLQTEASLFFD 60
           DILGRKIEGIEKLQQKPNEKRRKQETEETLEFGKTIKLTPTTEIIHFSITLQTEASLFFD
Sbjct: 1   DILGRKIEGIEKLQQKPNEKRRKQETEETLEFGKTIKLTPTTEIIHFSITLQTEASLFFD 60

Query: 61  LPTMAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRM 120
           LPTMAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRM
Sbjct: 61  LPTMAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRM 120

Query: 121 LPWAKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 175
           LPWAKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK
Sbjct: 121 LPWAKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 174

[Close]

BLAST of Carg10892-RA vs. NCBI nr
Match: KAG6599412.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 175
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 111

[Close]

BLAST of Carg10892-RA vs. NCBI nr
Match: XP_022946030.1 (early nodulin-93-like [Cucurbita moschata])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 175
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 111

[Close]

BLAST of Carg10892-RA vs. NCBI nr
Match: XP_022999275.1 (early nodulin-93-like [Cucurbita maxima])

HSP 1 Score: 199.1 bits (505), Expect = 3.1e-47
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLERNNLAS+DPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERNNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 174
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETY+F
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYDF 110

[Close]

BLAST of Carg10892-RA vs. NCBI nr
Match: XP_023545661.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 4.0e-47
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQ FLERNNLAS+DPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQGFLERNNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 174
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 110

[Close]

BLAST of Carg10892-RA vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.5e-31
Identity = 73/97 (75.26%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 73  LERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPWAKANLNHAA 132
           LER +LAS D K+A AKRC+ EGV+AGAKAA +AS+A+AIPTLASVRMLPWA+ANLNH A
Sbjct: 8   LERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTA 67

Query: 133 QALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAE 170
           QALIIS+   AAYFIVADKTVLATAR+NSF Q  N+E
Sbjct: 68  QALIISTATAAAYFIVADKTVLATARKNSFNQPSNSE 104

[Close]

BLAST of Carg10892-RA vs. ExPASy TrEMBL
Match: A0A6J1G2N4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111450241 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.0e-49
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 175
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEFK 111

[Close]

BLAST of Carg10892-RA vs. ExPASy TrEMBL
Match: A0A6J1KEY8 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111493696 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-47
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLERNNLAS+DPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERNNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 174
           AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETY+F
Sbjct: 61  AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYDF 110

[Close]

BLAST of Carg10892-RA vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.4e-47
Identity = 114/145 (78.62%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 42  TEIIHFSITLQTEAS-------------LFFDLPTMAKNLAQAFLERNNLASNDPKVAMA 101
           T++I F I+LQT++S              F DL TMAKNLAQAFLER NLAS+DPKVAMA
Sbjct: 5   TQLI-FQISLQTQSSSPVLFYSLFCSVFWFLDLLTMAKNLAQAFLERKNLASHDPKVAMA 64

Query: 102 KRCAREGVIAGAKAAAIASIATAIPTLASVRMLPWAKANLNHAAQALIISSVAGAAYFIV 161
           KRCAREGVIAGAKAAAIASIATAIPT ASVRMLPWAKA+LNH AQALIIS+VAGAAYFIV
Sbjct: 65  KRCAREGVIAGAKAAAIASIATAIPTFASVRMLPWAKAHLNHTAQALIISTVAGAAYFIV 124

Query: 162 ADKTVLATARRNSFKQKPNAETYEF 174
           ADKTVLATARRNSFKQKPN E YEF
Sbjct: 125 ADKTVLATARRNSFKQKPNTEAYEF 148

[Close]

BLAST of Carg10892-RA vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.6e-44
Identity = 102/110 (92.73%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLER NLAS+DPKVAMAKRCAREGVIAGAKAAAIASIATAIPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 174
           AKA+LNH AQALIIS+VAGAAYFIVADKTVLATARRNSFKQKPN E YEF
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEF 110

[Close]

BLAST of Carg10892-RA vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-43
Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 64  MAKNLAQAFLERNNLASNDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPW 123
           MAKNLAQAFLER N+AS+DPKVAMAKRCA+EGVIAGAKAAAIASIATAIPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNIASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 124 AKANLNHAAQALIISSVAGAAYFIVADKTVLATARRNSFKQKPNAETYEF 174
           AKA+LNH AQALIIS+VAGAAYFIVADKTVLATARRNSFKQKPN E YEF
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEF 110

[Close]

BLAST of Carg10892-RA vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related )

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-19
Identity = 51/81 (62.96%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 84  KVAMAKRCAREGVIAGAKAAAIASIATAIPTLASVRMLPWAKANLNHAAQALIISSVAGA 143
           K+  A+   + G IAGAKAAA+A++A+AIPT+A+VRM PWAKANLN+ AQALIISS + A
Sbjct: 26  KIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPWAKANLNYTAQALIISSASIA 85

Query: 144 AYFIVADKTVLATARRNSFKQ 165
           A+FI ADKT+L  ARRN+  Q
Sbjct: 86  AFFITADKTILQGARRNTEAQ 106

The following BLAST results are available for this feature:

BLAST of Carg10892-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030400.1	9.1e-84	100.00	hypothetical protein SDJN02_08747, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6599412.1	1.2e-48	100.00	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]
XP_022946030.1	1.2e-48	100.00	early nodulin-93-like [Cucurbita moschata]	[more]
XP_022999275.1	3.1e-47	98.18	early nodulin-93-like [Cucurbita maxima]	[more]
XP_023545661.1	4.0e-47	98.18	early nodulin-93-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg10892-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02921	5.5e-31	75.26	Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Carg10892-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2N4	6.0e-49	100.00	early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111450241 PE=4 SV=1	[more]
A0A6J1KEY8	1.5e-47	98.18	early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111493696 PE=4 SV=1	[more]
A0A1S3C6F4	7.4e-47	78.62	early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1	[more]
A0A5A7V781	2.6e-44	92.73	Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold28...	[more]
A0A0A0LFY1	1.0e-43	90.91	Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1	[more]

BLAST of Carg10892-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25940.1	4.9e-19	62.96	early nodulin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005050	Early nodulin 93 ENOD93 protein	PFAM	PF03386	ENOD93	coord: 84..161 e-value: 2.8E-37 score: 126.5
IPR005050	Early nodulin 93 ENOD93 protein	PANTHER	PTHR33605	EARLY NODULIN-93	coord: 76..167

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10892	Carg10892	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10892-RA:1	Carg10892-RA:1	exon
Carg10892-RA:2	Carg10892-RA:2	exon
Carg10892-RA:3	Carg10892-RA:3	exon
Carg10892-RA:4	Carg10892-RA:4	exon
Carg10892-RA:5	Carg10892-RA:5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10892-RA:cds	Carg10892-RA:cds	CDS
Carg10892-RA:cds	Carg10892-RA:cds_2	CDS
Carg10892-RA:cds	Carg10892-RA:cds_3	CDS
Carg10892-RA:cds	Carg10892-RA:cds_4	CDS
Carg10892-RA:cds	Carg10892-RA:cds_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10892-RA:three_prime_utr	Carg10892-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10892-RA	Carg10892-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane