Carg10607-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10607-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	THO complex subunit 5B
Location	Carg_Chr01: 12350736 .. 12355289 (+)
Sequence length	3191
RNA-Seq Expression	Carg10607-RA
Synteny	Carg10607-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAACGTTTTGTAGCCCAAAAGAGAGAGACGATAAATAATCCGCCCGACGTGCGGCCGATCGTCGCGCCATTCGTTAGCCGATTCGCTAATAGGTCGATAACCTCGCGGTTTTCTCACTGTGCTGCTTGAATTCGGCTTCAGCCCCCAGCGAAGCGCGGACCGGAGCATAGCGGGCGACTGGATCAGGCGGGCAGTAATCTGCGGAGATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAAACCGAGCCCCCGCCGCAAGAGAGCGAAACGGGCAAAATATCGCCTTACGAAATGCTGCGAGAGAGCAAGAGTTCTGTGGAGGAGATCGTAACCAAGATGCTCTCCATCAAGAAGCATGGCGAGCCAAAAACTCAGCTCAGAGAACTCGTAACGCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGTTTTTATTTCTACACGCCCTCTATTTTAGGGTTTTAGATTAGTTCCTAGATTCATTGGTTCGAAATGCTTTTTCTTTTATTTTGCATTGCTAATTTGCTATGCTTCACCACGAATTTCAATCATGTTGTAGTAGATTTCATTTCAAATTGCAGCCGATGACGACTCTGGTGGTATAATGTTTGCTCACAGGCGAACCGCTCTATTTTGCTGGAAGAGGACCGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTAGACTTCACCACGCTGCAACTTAATAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATCCTGATATCGAACTCGTGTCTGAGGATGAGTTTTGCCGGGATGCACCGGAGGATATTAAGAACTCCATAAGGTCAAAAGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGGTAGCCTTGAGTTGTTGATTGTAATTGTCTCTTTGAATTAATTAGCACGGATGTAGAATCTTTCTGGTAATTAGGGACACCGATAAGTCTGTTAGGATGGATGAAAACAATAGCTCCATGTTATTTACAAAAATTTGAGGATGCATTGTCTTCCTTCTTGTCAATTCTGTGGTTTTAAGAAATATGTTGGGCACTCCATCGACTTAAGTACTATTTTTAACAATGGCGGGTATTCAAGCTAGCTTGCGTGCCCTTAGGCTAATTCTAAAAGAATCCCTTAACATTATAATTTCAATAATGGCTTCAAAGTTACCTCATACCTGAACTTAGAACTTCCCCTCTTGGAATGAGTGAGTGTATGATGGTTTATCATCATCTTTTTATGTTTTTGGTTTTTATTTGAAAGTTCCAATTCTCCACCTTTAGCGTACACGGTTGATTTTAACTTCTTATTATTTATTTTTTTATTTTTATTGTGAAAGTGTATCTTTTTTCAGTGTGCTAATATCCACAATTTTATCAGCGCAAAGAACTTTGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTAGAAGTCATTGCTAATAGAAAGAAATTCTTATCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATGTTGCAGACAAAAAAATTAAAGCAACACCAGCTAGCAGAGTTACTTCCACCTCCTCTTTATGTAATCTACTCACAGTTCTTGGCACAAAAGGAAGCATTTGGTGAAAATATTGAATTGGAGATAGTAGGAAGTGTCAAAGATGCCCAAGCTTTTGCACGCCATCAAGCGAATAAGGATGCTGGTACCTGGGTGTTTATTTTCTCGACAACCATTAGTTAAACAGTTCTATCATATATGATAATATTTGTATATTTTAGGTGCATCAACCAATGTTGAGAGCTCCAAGTTGGAGGATGATGCCCCTGATGAAGATGACGATGGCCAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCAAGGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCACTAAAGATAATCCTTCACATTTATGACAATGAAACTTGCGAACCCAAGTCAATGAAATTGCTTTCCTTGAAGTTTGAATGCTTGTCAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAACTTGTTCCCGGATGACACTGGCCTTGAGCTGCCTCATCAGGTATAAATCCAGAAATTTCCGTTTATGTTTTGATTGTTCTGCTACCCTGCCCCAACATAACTTACATTTTCAACCAAAAAGAAGGAACTCCTATGAAGTATTATCTTTTTTCAAATAATGCAGTCAGCCAAACTTGTTGTTCGTGAAACTCTTTCATTTAGTGATAAGAGAACCTCTCGACCTTATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCGCCATTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAAAACCGCATACAGACAGTTGTGCAAAGATTGCGCTCTCGGAAAAAGGCTCAGCTGGCTCTTGTGTGAGTCATTGATTTCTATTCAAATTTGTAGATAATAAATGATTTTGAAGAACAATAGGAGATGGATTTGTAGCTTAGTGATCAAATCAATCATCTTTTGTTTGTGGAATTTCATGCTATATATTTGTGACTAATATTAGCTATGCATGCATGCCATGTTTACTTTTACTTTGTTGTATTTTGTATGTGGAATCTTTTCCCTCTGGTGGAAGGATCACTCGTTCAGATAAGTATGGTTTGTGGATTATATTGAGAAATTTGAATTTTTCTATTGACTCACAGGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCAGTTCTGACATGTGATAATGTCCCATGGGCTTCACATAAACCTTCATGCTCTTTGCAAGGTTGGTCACTCGTAGGCTATGCTACAAGTCAGGAATCATCTTTGACTATAATGGAGAAAGAGAAAGTTCGGGATCCTTTAGATGTTGATATGCTTGGAAAATCTGGCATTTCAAGAGAAGATATTGACGGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAGATAATGCTCAACCTACTCCCTTAAGAACACCCAATCTTGAGCATTCTAAGCAGCTAACTCTAATTTCCAAAAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAGTAAACATGATGAAGATTATGAGTTGATGCTAGATGTTGATAGCGACCAGGATGAGCCAATGCAGACTGAGCTTGCAGCAGATGACGTAGCTTCTATTCCTTCCAACGACATAACAAGAAAGACATGGATGGATTATGGGTCCAAGGAATATTGCCTTGTCATGACCAGGAACACTGATTCACCAGCCAAAAATCTCAAGTTGCAAGCCAAGGTAACATTTTGTTCAATAATTTTCTTACAGAAACTATTTTTATTGATTTTCTGAATATTTAGATCAATAACATTATGACAGATTAAAATCAGCATGGAGTATCCTCTTAGGTCTCCTTTCTTTACTTTGAATCTTTACACGATCAATTCTGAAGAAAACCGTGATGAGAGTGATGACTCTGATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTAAGGAGGAAAGTTTGTTTTAATATGAGTACTGGTTGTTGACCTTGTAATTTTTCACATTGTAGATCATTGTTTCTTGTCTTGCAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAGGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGAAATGTTGTTCAACTACTGCATCAGTGAGGCGTCCCGATCCTCTGAAAGGAAAAAGAGTAGTTCTGTGATTGATGTTGGATTATGCAAACCTGTTAGTGGTAGTATACATGCTAGGTCATTTAGGGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGACATTGAATGCGCTCCAGGCTATCCTTGTTAAGAATTCTTAGGATCTTAAAATTATTATTGTGTGCCTTCTGTTACTCTGCTGGTGGGGGAACAGTTTTGTGGTAACCTGACTGCCTGAAAAAGATGAAGAACGAAATTATTGTTTCTTGGCCAGTTTCTTCAGTATTGAAAATTTGAAATATTGATTCATGTAATGGCCATGGGTGGTCACAATTGTGCCCAATCCTGCAGGTTGAGTATCATCAGATCATCAGCCAAACTGATCTGTTTCATCTAATGCAGTTGTTCATATGAGATCGTCTATTAAATAGGCTCTTTGGAAATGTAATTTCAGGCTTGCAATTCCCTAAATTTTAATTGCAGCTCTGGGGGATGTTATTCAGAAGTTCGAAAAGTGGGAGGAAGCTTTCAGGCAGGCACTAAGGAAATTAGGTTTGCTCTGTATCTGAGTCTTTGCAGCTGATGTCGTTGGAAACTCATAATGTTGTAGGTTATCCACAATTACAGTTTAGTTATATGGTGTATTGATTGAATTCTTAGTCAAATTTTAAAAACA

mRNA sequence

ATTCAACGTTTTGTAGCCCAAAAGAGAGAGACGATAAATAATCCGCCCGACGTGCGGCCGATCGTCGCGCCATTCGTTAGCCGATTCGCTAATAGGTCGATAACCTCGCGGTTTTCTCACTGTGCTGCTTGAATTCGGCTTCAGCCCCCAGCGAAGCGCGGACCGGAGCATAGCGGGCGACTGGATCAGGCGGGCAGTAATCTGCGGAGATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAAACCGAGCCCCCGCCGCAAGAGAGCGAAACGGGCAAAATATCGCCTTACGAAATGCTGCGAGAGAGCAAGAGTTCTGTGGAGGAGATCGTAACCAAGATGCTCTCCATCAAGAAGCATGGCGAGCCAAAAACTCAGCTCAGAGAACTCGTAACGCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGCGAACCGCTCTATTTTGCTGGAAGAGGACCGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTAGACTTCACCACGCTGCAACTTAATAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATCCTGATATCGAACTCGTGTCTGAGGATGAGTTTTGCCGGGATGCACCGGAGGATATTAAGAACTCCATAAGGTCAAAAGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGCGCAAAGAACTTTGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTAGAAGTCATTGCTAATAGAAAGAAATTCTTATCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATGTTGCAGACAAAAAAATTAAAGCAACACCAGCTAGCAGAGTTACTTCCACCTCCTCTTTATGTAATCTACTCACAGTTCTTGGCACAAAAGGAAGCATTTGGTGAAAATATTGAATTGGAGATAGTAGGAAGTGTCAAAGATGCCCAAGCTTTTGCACGCCATCAAGCGAATAAGGATGCTGGTGCATCAACCAATGTTGAGAGCTCCAAGTTGGAGGATGATGCCCCTGATGAAGATGACGATGGCCAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCAAGGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCACTAAAGATAATCCTTCACATTTATGACAATGAAACTTGCGAACCCAAGTCAATGAAATTGCTTTCCTTGAAGTTTGAATGCTTGTCAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAACTTGTTCCCGGATGACACTGGCCTTGAGCTGCCTCATCAGTCAGCCAAACTTGTTGTTCGTGAAACTCTTTCATTTAGTGATAAGAGAACCTCTCGACCTTATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCGCCATTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAAAACCGCATACAGACAGTTGTGCAAAGATTGCGCTCTCGGAAAAAGGCTCAGCTGGCTCTTGTGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCAGTTCTGACATGTGATAATGTCCCATGGGCTTCACATAAACCTTCATGCTCTTTGCAAGGTTGGTCACTCGTAGGCTATGCTACAAGTCAGGAATCATCTTTGACTATAATGGAGAAAGAGAAAGTTCGGGATCCTTTAGATGTTGATATGCTTGGAAAATCTGGCATTTCAAGAGAAGATATTGACGGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAGATAATGCTCAACCTACTCCCTTAAGAACACCCAATCTTGAGCATTCTAAGCAGCTAACTCTAATTTCCAAAAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAGTAAACATGATGAAGATTATGAGTTGATGCTAGATGTTGATAGCGACCAGGATGAGCCAATGCAGACTGAGCTTGCAGCAGATGACGTAGCTTCTATTCCTTCCAACGACATAACAAGAAAGACATGGATGGATTATGGGTCCAAGGAATATTGCCTTGTCATGACCAGGAACACTGATTCACCAGCCAAAAATCTCAAGTTGCAAGCCAAGATTAAAATCAGCATGGAGTATCCTCTTAGGTCTCCTTTCTTTACTTTGAATCTTTACACGATCAATTCTGAAGAAAACCGTGATGAGAGTGATGACTCTGATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAGGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGAAATGTTGTTCAACTACTGCATCAGTGAGGCGTCCCGATCCTCTGAAAGGAAAAAGAGTAGTTCTGTGATTGATGTTGGATTATGCAAACCTGTTAGTGGTAGTATACATGCTAGGTCATTTAGGGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGACATTGAATGCGCTCCAGGCTATCCTTGTTAAGAATTCTTAGGATCTTAAAATTATTATTGTGTGCCTTCTGTTACTCTGCTGGTGGGGGAACAGTTTTGTGGTAACCTGACTGCCTGAAAAAGATGAAGAACGAAATTATTGTTTCTTGGCCAGTTTCTTCAGTATTGAAAATTTGAAATATTGATTCATGTAATGGCCATGGGTGGTCACAATTGTGCCCAATCCTGCAGGTTGAGTATCATCAGATCATCAGCCAAACTGATCTGTTTCATCTAATGCAGTTGTTCATATGAGATCGTCTATTAAATAGGCTCTTTGGAAATGTAATTTCAGGCTTGCAATTCCCTAAATTTTAATTGCAGCTCTGGGGGATGTTATTCAGAAGTTCGAAAAGTGGGAGGAAGCTTTCAGGCAGGCACTAAGGAAATTAGGTTTGCTCTGTATCTGAGTCTTTGCAGCTGATGTCGTTGGAAACTCATAATGTTGTAGGTTATCCACAATTACAGTTTAGTTATATGGTGTATTGATTGAATTCTTAGTCAAATTTTAAAAACA

Coding sequence (CDS)

ATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAAACCGAGCCCCCGCCGCAAGAGAGCGAAACGGGCAAAATATCGCCTTACGAAATGCTGCGAGAGAGCAAGAGTTCTGTGGAGGAGATCGTAACCAAGATGCTCTCCATCAAGAAGCATGGCGAGCCAAAAACTCAGCTCAGAGAACTCGTAACGCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGCGAACCGCTCTATTTTGCTGGAAGAGGACCGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTAGACTTCACCACGCTGCAACTTAATAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAGGCCTGTAAAGACTTCAAATCAAAGTATCCTGATATCGAACTCGTGTCTGAGGATGAGTTTTGCCGGGATGCACCGGAGGATATTAAGAACTCCATAAGGTCAAAAGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGCGCAAAGAACTTTGCAAACGGCGAGATGAACTTGAACAACATAAGAAAAGCCTTCTAGAAGTCATTGCTAATAGAAAGAAATTCTTATCAAGTCTTCCCTCACACCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATGTTGCAGACAAAAAAATTAAAGCAACACCAGCTAGCAGAGTTACTTCCACCTCCTCTTTATGTAATCTACTCACAGTTCTTGGCACAAAAGGAAGCATTTGGTGAAAATATTGAATTGGAGATAGTAGGAAGTGTCAAAGATGCCCAAGCTTTTGCACGCCATCAAGCGAATAAGGATGCTGGTGCATCAACCAATGTTGAGAGCTCCAAGTTGGAGGATGATGCCCCTGATGAAGATGACGATGGCCAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCAAGGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCACTAAAGATAATCCTTCACATTTATGACAATGAAACTTGCGAACCCAAGTCAATGAAATTGCTTTCCTTGAAGTTTGAATGCTTGTCAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGGACCTGAGAATAACATCTTATGCAACTTGTTCCCGGATGACACTGGCCTTGAGCTGCCTCATCAGTCAGCCAAACTTGTTGTTCGTGAAACTCTTTCATTTAGTGATAAGAGAACCTCTCGACCTTATAAGTGGGCCCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCGCCATTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAAAACCGCATACAGACAGTTGTGCAAAGATTGCGCTCTCGGAAAAAGGCTCAGCTGGCTCTTGTGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCAGTTCTGACATGTGATAATGTCCCATGGGCTTCACATAAACCTTCATGCTCTTTGCAAGGTTGGTCACTCGTAGGCTATGCTACAAGTCAGGAATCATCTTTGACTATAATGGAGAAAGAGAAAGTTCGGGATCCTTTAGATGTTGATATGCTTGGAAAATCTGGCATTTCAAGAGAAGATATTGACGGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAGATAATGCTCAACCTACTCCCTTAAGAACACCCAATCTTGAGCATTCTAAGCAGCTAACTCTAATTTCCAAAAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAGTAAACATGATGAAGATTATGAGTTGATGCTAGATGTTGATAGCGACCAGGATGAGCCAATGCAGACTGAGCTTGCAGCAGATGACGTAGCTTCTATTCCTTCCAACGACATAACAAGAAAGACATGGATGGATTATGGGTCCAAGGAATATTGCCTTGTCATGACCAGGAACACTGATTCACCAGCCAAAAATCTCAAGTTGCAAGCCAAGATTAAAATCAGCATGGAGTATCCTCTTAGGTCTCCTTTCTTTACTTTGAATCTTTACACGATCAATTCTGAAGAAAACCGTGATGAGAGTGATGACTCTGATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAGGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGAAATGTTGTTCAACTACTGCATCAGTGAGGCGTCCCGATCCTCTGAAAGGAAAAAGAGTAGTTCTGTGATTGATGTTGGATTATGCAAACCTGTTAGTGGTAGTATACATGCTAGGTCATTTAGGGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGACATTGAATGCGCTCCAGGCTATCCTTGTTAA

Protein sequence

MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRDPLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDWYNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVIDVGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC

Homology

[Close]

BLAST of Carg10607-RA vs. NCBI nr
Match: KAG7037799.1 (THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1598.6 bits (4138), Expect = 0.0e+00
Identity = 818/818 (100.00%), Postives = 818/818 (100.00%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. NCBI nr
Match: KAG6608471.1 (THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1595.5 bits (4130), Expect = 0.0e+00
Identity = 817/818 (99.88%), Postives = 817/818 (99.88%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSA NLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAQNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. NCBI nr
Match: XP_022982205.1 (THO complex subunit 5B [Cucurbita maxima])

HSP 1 Score: 1583.9 bits (4100), Expect = 0.0e+00
Identity = 811/818 (99.14%), Postives = 813/818 (99.39%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSL IMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLR PFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRPPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHIL MLPLDQENYILSHQICCLEMLFNYCI+EASRSSERKKSS VID
Sbjct: 721 YNELRAMEAEVNLHILNMLPLDQENYILSHQICCLEMLFNYCINEASRSSERKKSSFVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. NCBI nr
Match: XP_022940324.1 (THO complex subunit 5B [Cucurbita moschata])

HSP 1 Score: 1583.5 bits (4099), Expect = 0.0e+00
Identity = 811/818 (99.14%), Postives = 813/818 (99.39%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF +DAPEDIK SIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ AKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQPAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYA SQESSLTIMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYAASQESSLTIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVAS PSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASTPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. NCBI nr
Match: XP_023524487.1 (THO complex subunit 5B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1577.4 bits (4083), Expect = 0.0e+00
Identity = 809/818 (98.90%), Postives = 810/818 (99.02%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDA EDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAQEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSL EVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLQEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVES KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESFKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPE PPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPEFPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYA SQESSLTIMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYAKSQESSLTIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLR PFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRPPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSS VID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSFVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot
Match: F4K4J0 (THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 5.0e-268
Identity = 491/829 (59.23%), Postives = 628/829 (75.75%), Query Frame = 0


Query: 2   DEEIEEGMLIED----------ETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIK 61
           D EIEEGM+  D          ET  PP+  E GK SP E+LRESK+SVEEIV KMLS+K
Sbjct: 3   DGEIEEGMVTADEFPTPEVTTIETIQPPR--EPGK-SPLELLRESKTSVEEIVAKMLSMK 62

Query: 62  KHGEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMY 121
           K G  K+++REL+TQMFL+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMY
Sbjct: 63  KQGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMY 122

Query: 122 EKSHYVKAIKACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYEL 181
           EKSHYVKAIKAC+DFKSKYPDI+LV E +F R APE IK+   S DS+H LM +RL++EL
Sbjct: 123 EKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFEL 182

Query: 182 FQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKL 241
            QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN LG+  TKKL
Sbjct: 183 HQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKL 242

Query: 242 KQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNV 301
           KQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+ KD+G S+N 
Sbjct: 243 KQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNT 302

Query: 302 ESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSM 361
           ESS+LEDD PD+DDDGQRRRKRPKK+ ++   + AG+YQVHPLKI+LHIYD+E  + KS+
Sbjct: 303 ESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSL 362

Query: 362 KLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFS 421
           KL+ LKFE L KLN++CVG EGS +GPE NI CNLFPDD GLE PHQS KL++ +  +F 
Sbjct: 363 KLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFD 422

Query: 422 DKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQTVV 481
           + RTSRPYKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ+R+QTV+
Sbjct: 423 ENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVL 482

Query: 482 QRLRSRKKAQLALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSL 541
           +R+R RKKA LAL EQLD L K + PV+ C++ PWA HK  C+L  W  +  + S+  SL
Sbjct: 483 RRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSL 542

Query: 542 TIMEKEKVRDPLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLE 601
           T+   E+V +P+++D+ G+S   +ED +  REDGELP+LV++ + L ++  TP +  N  
Sbjct: 543 TLNSVEQVPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQA 602

Query: 602 HSKQLTLISKSITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPM-QTELAADDVASIPS 661
            S+QL L++K++    +  +  SF K+++D +L+LD DS+ DEP  +TE   +++    +
Sbjct: 603 RSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKA 662

Query: 662 NDITRKTWMDYGSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSE 721
           ++    +W+DYGS+E+ LV +R TD   K  KL+A ++ISMEYPLR P F+L+L+  +S 
Sbjct: 663 DN----SWVDYGSREFALVFSRKTDG-GKLWKLEAMVQISMEYPLRPPLFSLSLHASSSS 722

Query: 722 ENRDESDDSDWYNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRS 781
            N + +++SD YNELRAMEAEVNLH+LK++P DQENY+LSHQI CL MLF+Y + + S  
Sbjct: 723 GNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPD 782

Query: 782 SERKKSSSVIDVGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           S+R  +++V+DVGLCKPV G +  RSFRGRD RKMISWK   CA GYPC
Sbjct: 783 SKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYPC 819

[Close]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot
Match: F4HRC1 (THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.2e-143
Identity = 276/461 (59.87%), Postives = 347/461 (75.27%), Query Frame = 0


Query: 24  TGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILL 83
           T + SP E+L+++K+SVE I+ KMLSIK+ G PK++ REL+TQMFL+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 84  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCR 143
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+YP+I+L+SE +F  
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 144 DAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQHKKSLLEVIANRKKFLS 203
           DAPE IK+   S DS+H+LML+RL++EL QRKELCK R  LEQ KKSLLE  A R KFLS
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLS 191

Query: 204 SLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIE 263
           SLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A KEAF ENI+
Sbjct: 192 SLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENID 251

Query: 264 LEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNI 323
           +E+ GS+KDAQ +AR QA +      N ES +LE        D +R+RKR KK    V  
Sbjct: 252 VEVSGSLKDAQTYARQQAEQ------NSESLRLEVGV-----DEERQRKRLKK----VGS 311

Query: 324 EHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNIL 383
           +  G+YQVHPLK++LH+YD+E  +PKS +L+ LKFE L KLN++CVGIE S +G E NIL
Sbjct: 312 DEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNIL 371

Query: 384 CNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQES 443
           CNLFPDD+GLE PHQSAKL++     F   RTSRPYKWAQHLAGI+ LPE+ P  + +  
Sbjct: 372 CNLFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-- 431

Query: 444 ASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 485
              +   SD   G +       +QTV+QR+RS+KK +L LV
Sbjct: 432 ---DIQYSDTAKGYASASDHRNVQTVLQRIRSQKKTKLTLV 452

[Close]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot
Match: Q5ZJK1 (THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-42
Identity = 150/501 (29.94%), Postives = 248/501 (49.50%), Query Frame = 0


Query: 27  ISPYEMLRESKSSVEEIVTKMLSIKKHG--EPKTQLRELVTQMFLHFVTLRQANRSILLE 86
           I  YE+ +E+   ++ ++ ++  +K  G  +  +++ E   Q  +HF+TL++ NR   + 
Sbjct: 48  IKDYELYKETCQELQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIR 107

Query: 87  EDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCRD 146
             + + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ +IELVS +EF  +
Sbjct: 108 LKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSE 167

Query: 147 APEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQHKKSLLEVIANRKKFLSS 206
           AP +I     +    H   L RLD+EL QRK L +R  E +  K+ +L+ I  +K++LSS
Sbjct: 168 APTEISRPDITLTEPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSS 227

Query: 207 LPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIEL 266
           L   L S+ +ASLPVQ  L M   +  KQ++ A  LPPPLYV++ Q  A  +A  + + +
Sbjct: 228 LQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVV 287

Query: 267 EIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIE 326
            I GSV++A+A  +             E S+ ++   D +++   +R+RP  +  +++ +
Sbjct: 288 AIEGSVEEAKALYKPP-----------EDSQDDESDSDMEEEQTTKRRRP-TLGVQLDDK 347

Query: 327 HAGIYQVHPLKI----------ILHIYDNETCEPKSMKLLSLKFECLSKLNIICVGIE-- 386
              + + HPL +          +LH+          M +L L F  L  LNI+ V  +  
Sbjct: 348 RKEMLKRHPLSVTVDLKCKDENVLHLTFYYLMNLNIMTVLHLTFYYLMNLNIMTVKTKVT 407

Query: 387 -----------GSHEGPENNILCNLFPDDTGLELPHQSAKLVVRET--LSFSDKRT--SR 446
                      G    P++ + C L+P D G + P+ + +    +   L+ SD  T    
Sbjct: 408 TAAELTTAISAGDLLSPDSLLSC-LYPGDHGKKTPNPANQFQFDKVGILTLSDYVTELGH 467

Query: 447 PYKWAQHLAGIDFLPELPP-LVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSR 498
           PY W Q L G+ F  + P   V+A  S S                  + ++  ++ LR+R
Sbjct: 468 PYVWVQKLGGLHFPKDQPQHTVTADNSLSA-----------------SHMEMTMKLLRTR 518

[Close]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot
Match: Q6NY52 (THO complex subunit 5 homolog OS=Danio rerio OX=7955 GN=thoc5 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.8e-42
Identity = 150/521 (28.79%), Postives = 261/521 (50.10%), Query Frame = 0


Query: 30  YEMLRESKSSVEEIVTKMLSIK----KHGEPKTQLRELVTQMFLHFVTLRQANRSILLEE 89
           Y + +E+ +++ ++++++  +K    K G  + +LR    Q  +HF+TL++ NR   +  
Sbjct: 52  YTLYKETCAALAKLMSEIQELKTSGAKDGSAEIELRR--KQSSIHFITLKKLNRLAHMRL 111

Query: 90  DRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCRDA 149
            + + +T  AK  VD   LQL NL+YE  H  K I  C +FKS++ +IELVSEDEF +DA
Sbjct: 112 KKGRDQTHEAKQRVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSEDEFFQDA 171

Query: 150 PEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQHKKSLLEVIANRKKFLSSL 209
           P +I     +++  H L L RLD+EL QRK L ++       K+ + + I  ++++LSSL
Sbjct: 172 PAEISRPQVTREDHHQLTLARLDWELDQRKRLAEQYKTSLSSKEKIQKAIEQKREYLSSL 231

Query: 210 PSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELE 269
              L ++ +ASLPVQ  L M      KQ ++A  LPPPLYV++ Q  A  +A  +N+ + 
Sbjct: 232 QPGLHNIMQASLPVQEYLSMPFEHMQKQAEVARHLPPPLYVLFVQAGAYGQACDKNLTVS 291

Query: 270 IVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEH 329
           I G V +A+A +R             E S+ ++   D +++ Q  ++R   +  +++ + 
Sbjct: 292 IRGDVDEAKALSRPP-----------EDSQDDESDSDAEEEQQNTKRRRPTVGVQLDDKR 351

Query: 330 AGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNII--------CVGIEGSHEG 389
             + + HPL + + +      + K   +L L F  L  LNI+         V + G+   
Sbjct: 352 KEMLRRHPLSLGIDL------KCKDGSVLHLYFYYLMNLNILTVKTKVSTSVDLSGAISA 411

Query: 390 PE----NNILCNLFPDDTGLELPHQSAKLVVRET--LSFSD--KRTSRPYKWAQHLAGID 449
            E     ++L  L+  D G E P+ + +    +    +F+D       PY W Q L+G+ 
Sbjct: 412 GELLNSESLLNCLYASDHGNETPNPANRYQFDKVGITTFADYVSDLGHPYVWVQKLSGLQ 471

Query: 450 FLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDS 509
           F  +     +AQ   SG  + +            + ++  ++ LR R +++LAL +Q  S
Sbjct: 472 FSSD-----AAQSELSGSALSA------------SHMEKSMKLLRGRLQSRLALHKQFSS 531

Query: 510 LEKLKWPVLT-CDNVPWASHKPSCSLQGWSLVGYATSQESS 530
           LE    PV + C ++  A  K    L  W+++ +    E S
Sbjct: 532 LEHSIVPVSSECQHLFPA--KVVSGLTRWTMMSHQEFTELS 534

[Close]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot
Match: Q13769 (THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-41
Identity = 163/563 (28.95%), Postives = 272/563 (48.31%), Query Frame = 0


Query: 12  EDETEPPPQESETGKISP---YEMLRESKSSVEEIVTKMLSIKKHG--EPKTQLRELVTQ 71
           E E +   +E+E     P   YE+ + +   ++ ++ ++  +K  G  +   ++ E   Q
Sbjct: 31  EQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQ 90

Query: 72  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 131
             +HF+TL++ NR   +   + + +T  AK  VD   LQL NL+YE  H  K I  C +F
Sbjct: 91  SCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEF 150

Query: 132 KSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 191
           KSK+ +I+LVS +EF ++AP DI  +  +    H   L RLD+EL QRK L ++  E   
Sbjct: 151 KSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLS 210

Query: 192 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 251
           +K+ +L+ I  +K++LSSL   L S+ +ASLPVQ  L M   +  KQ++ A  LPPPLYV
Sbjct: 211 NKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYV 270

Query: 252 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 311
           ++ Q  A  +A  + + + I GSV +A+A  +             E S+ ++   D +++
Sbjct: 271 LFVQATAYGQACDKTLSVAIEGSVDEAKALFKPP-----------EDSQDDESDSDAEEE 330

Query: 312 GQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 371
              +R+RP  +  +++ +   + + HPL ++L +      + K   +L L F  L  LNI
Sbjct: 331 QTTKRRRP-TLGVQLDDKRKEMLKRHPLSVMLDL------KCKDDSVLHLTFYYLMNLNI 390

Query: 372 ICVGIE-------------GSHEGPENNILCNLFPDDTGLELPHQSAKLVVRE----TLS 431
           + V  +             G    P++ + C L+P D G + P+ + +    +    TLS
Sbjct: 391 MTVKAKVTTAMELITPISAGDLLSPDSVLSC-LYPGDHGKKTPNPANQYQFDKVGILTLS 450

Query: 432 FSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTV 491
                   PY W Q L G+ F  E P           +TV +D    LS     + ++T 
Sbjct: 451 DYVLELGHPYLWVQKLGGLHFPKEQPQ----------QTVIAD--HSLS----ASHMETT 510

Query: 492 VQRLRSRKKAQLALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESS 551
           ++ L++R +++LAL +Q  SLE    PV T D       K    L  W  V +    E  
Sbjct: 511 MKLLKTRVQSRLALHKQFASLEHGIVPV-TSDCQYLFPAKVVSRLVKWVTVAHEDYMELH 550

Query: 552 LTIMEKEKVRDPLDVDMLGKSGI 553
            T       +D +D  + G + +
Sbjct: 571 FT-------KDIVDAGLAGDTNL 550

[Close]

BLAST of Carg10607-RA vs. ExPASy TrEMBL
Match: A0A6J1J206 (THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1)

HSP 1 Score: 1583.9 bits (4100), Expect = 0.0e+00
Identity = 811/818 (99.14%), Postives = 813/818 (99.39%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSL IMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLR PFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRPPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHIL MLPLDQENYILSHQICCLEMLFNYCI+EASRSSERKKSS VID
Sbjct: 721 YNELRAMEAEVNLHILNMLPLDQENYILSHQICCLEMLFNYCINEASRSSERKKSSFVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. ExPASy TrEMBL
Match: A0A6J1FJR5 (THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1)

HSP 1 Score: 1583.5 bits (4099), Expect = 0.0e+00
Identity = 811/818 (99.14%), Postives = 813/818 (99.39%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF +DAPEDIK SIRSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ AKLVVRETLSFSDKRTSRPYK
Sbjct: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQPAKLVVRETLSFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYA SQESSLTIMEKEKVRD
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYAASQESSLTIMEKEKVRD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK
Sbjct: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVAS PSNDITRKTWMDY
Sbjct: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASTPSNDITRKTWMDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW
Sbjct: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC
Sbjct: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 818

[Close]

BLAST of Carg10607-RA vs. ExPASy TrEMBL
Match: A0A5A7VBI1 (THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00890 PE=3 SV=1)

HSP 1 Score: 1474.9 bits (3817), Expect = 0.0e+00
Identity = 748/818 (91.44%), Postives = 782/818 (95.60%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDET P P +SETGKISP+EMLRESKS VE+IVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDAPE+IKNS RSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANK+ G+S N ES+KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNE CEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           L KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCD VPW SHKPSC LQGWSLVGY+T Q SSLT MEKEKV+D
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           P+DVDM+GKSGISRE+ID AREDGELPALVSST IL+N + T LRTPNLEHSKQLTLISK
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSF+KHDEDYELM+DVDSD+D+P+Q ELAADDVAS+PSNDITRK W+DY
Sbjct: 601 SITPQTNYSRMLSFNKHDEDYELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCL++TRNT+ PAKNLKLQAKIKISMEYPLR P FTLNLYT+NSEEN +ESDDSDW
Sbjct: 661 GSKEYCLILTRNTEQPAKNLKLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQI CL MLFNYCISEAS SSER+KSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGS+HARSFRGRDRRKMISWKDIEC PGYPC
Sbjct: 781 VGLCKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC 818

[Close]

BLAST of Carg10607-RA vs. ExPASy TrEMBL
Match: A0A1S3BTI6 (THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1)

HSP 1 Score: 1474.9 bits (3817), Expect = 0.0e+00
Identity = 748/818 (91.44%), Postives = 782/818 (95.60%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDET P P +SETGKISP+EMLRESKS VE+IVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDAPE+IKNS RSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANK+ G+S N ES+KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYDNE CEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           L KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCD VPW SHKPSC LQGWSLVGY+T Q SSLT MEKEKV+D
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           P+DVDM+GKSGISRE+ID AREDGELPALVSST IL+N + T LRTPNLEHSKQLTLISK
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSF+KHDEDYELM+DVDSD+D+P+Q ELAADDVAS+PSNDITRK W+DY
Sbjct: 601 SITPQTNYSRMLSFNKHDEDYELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCL++TRNT+ PAKNLKLQAKIKISMEYPLR P FTLNLYT+NSEEN +ESDDSDW
Sbjct: 661 GSKEYCLILTRNTEQPAKNLKLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQI CL MLFNYCISEAS SSER+KSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           VGLCKPVSGS+HARSFRGRDRRKMISWKDIEC PGYPC
Sbjct: 781 VGLCKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC 818

[Close]

BLAST of Carg10607-RA vs. ExPASy TrEMBL
Match: A0A0A0KZS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1)

HSP 1 Score: 1466.1 bits (3794), Expect = 0.0e+00
Identity = 743/818 (90.83%), Postives = 780/818 (95.35%), Query Frame = 0


Query: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60
           MDEEIEEGMLIEDETEP P +SETGKISP+EMLRESKS VE+IVTKMLSIKKHGE KTQL
Sbjct: 1   MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL 60

Query: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKR 180
           KACKDFKSKYPDIELVSEDEF RDAPE+IKNS+RSKDSAHNLMLQRLDYELFQRKELCKR
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKR 180

Query: 181 RDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELL 240
           RDELEQHKK LLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLKQHQLAELL
Sbjct: 181 RDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL 240

Query: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDA 300
           PPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANK+ GAS N ES+KLEDDA
Sbjct: 241 PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDA 300

Query: 301 PDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFEC 360
           PDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYD+ETCEPKSMKLLSLKFEC
Sbjct: 301 PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFEC 360

Query: 361 LSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYK 420
           L KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVV ETL+FSDKRTSRPYK
Sbjct: 361 LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK 420

Query: 421 WAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480
           WAQHLAGIDFLPELPPLVSAQES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
Sbjct: 421 WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ 480

Query: 481 LALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRD 540
           LALVEQLDSLEKLKWPVLTCD VPW SHKPSC LQGWSLVGY+T Q SSLT MEKEKV+D
Sbjct: 481 LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD 540

Query: 541 PLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISK 600
           P+DVDM+GKSGISRE+ID AREDGELPALVSST IL+N +   +RTPNLEHSKQLTLISK
Sbjct: 541 PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNPE---VRTPNLEHSKQLTLISK 600

Query: 601 SITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDY 660
           SITPQTNYSRMLSF+KHDEDYELM+DVDSDQD+P+Q ELAADDVAS+PSN+IT K W+DY
Sbjct: 601 SITPQTNYSRMLSFNKHDEDYELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDY 660

Query: 661 GSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDW 720
           GSKEYCL++TRNT+ P KNLKLQAKIKISMEYPLR P FTLNLYT+NSEENR+E DDSDW
Sbjct: 661 GSKEYCLILTRNTERPTKNLKLQAKIKISMEYPLRPPVFTLNLYTMNSEENREECDDSDW 720

Query: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVID 780
           YNELRAMEAEVNLHILKMLPLDQENYILSHQICCL MLFNYCISEAS  SER+KSSSVID
Sbjct: 721 YNELRAMEAEVNLHILKMLPLDQENYILSHQICCLAMLFNYCISEASLFSERRKSSSVID 780

Query: 781 VGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           +GLCKPVSGS+HARSFRGRDRRKMISWKDIEC PGYPC
Sbjct: 781 IGLCKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC 815

[Close]

BLAST of Carg10607-RA vs. TAIR 10
Match: AT5G42920.2 (THO complex, subunit 5 )

HSP 1 Score: 925.2 bits (2390), Expect = 3.5e-269
Identity = 491/829 (59.23%), Postives = 628/829 (75.75%), Query Frame = 0


Query: 2   DEEIEEGMLIED----------ETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIK 61
           D EIEEGM+  D          ET  PP+  E GK SP E+LRESK+SVEEIV KMLS+K
Sbjct: 3   DGEIEEGMVTADEFPTPEVTTIETIQPPR--EPGK-SPLELLRESKTSVEEIVAKMLSMK 62

Query: 62  KHGEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMY 121
           K G  K+++REL+TQMFL+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMY
Sbjct: 63  KQGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMY 122

Query: 122 EKSHYVKAIKACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYEL 181
           EKSHYVKAIKAC+DFKSKYPDI+LV E +F R APE IK+   S DS+H LM +RL++EL
Sbjct: 123 EKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFEL 182

Query: 182 FQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKL 241
            QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN LG+  TKKL
Sbjct: 183 HQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKL 242

Query: 242 KQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNV 301
           KQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+ KD+G S+N 
Sbjct: 243 KQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNT 302

Query: 302 ESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSM 361
           ESS+LEDD PD+DDDGQRRRKRPKK+ ++   + AG+YQVHPLKI+LHIYD+E  + KS+
Sbjct: 303 ESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSL 362

Query: 362 KLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFS 421
           KL+ LKFE L KLN++CVG EGS +GPE NI CNLFPDD GLE PHQS KL++ +  +F 
Sbjct: 363 KLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFD 422

Query: 422 DKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQTVV 481
           + RTSRPYKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ+R+QTV+
Sbjct: 423 ENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVL 482

Query: 482 QRLRSRKKAQLALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQESSL 541
           +R+R RKKA LAL EQLD L K + PV+ C++ PWA HK  C+L  W  +  + S+  SL
Sbjct: 483 RRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSL 542

Query: 542 TIMEKEKVRDPLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPNLE 601
           T+   E+V +P+++D+ G+S   +ED +  REDGELP+LV++ + L ++  TP +  N  
Sbjct: 543 TLNSVEQVPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQA 602

Query: 602 HSKQLTLISKSITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPM-QTELAADDVASIPS 661
            S+QL L++K++    +  +  SF K+++D +L+LD DS+ DEP  +TE   +++    +
Sbjct: 603 RSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKA 662

Query: 662 NDITRKTWMDYGSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTINSE 721
           ++    +W+DYGS+E+ LV +R TD   K  KL+A ++ISMEYPLR P F+L+L+  +S 
Sbjct: 663 DN----SWVDYGSREFALVFSRKTDG-GKLWKLEAMVQISMEYPLRPPLFSLSLHASSSS 722

Query: 722 ENRDESDDSDWYNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEASRS 781
            N + +++SD YNELRAMEAEVNLH+LK++P DQENY+LSHQI CL MLF+Y + + S  
Sbjct: 723 GNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPD 782

Query: 782 SERKKSSSVIDVGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
           S+R  +++V+DVGLCKPV G +  RSFRGRD RKMISWK   CA GYPC
Sbjct: 783 SKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYPC 819

[Close]

BLAST of Carg10607-RA vs. TAIR 10
Match: AT5G42920.1 (THO complex, subunit 5 )

HSP 1 Score: 800.0 bits (2065), Expect = 1.7e-231
Identity = 412/711 (57.95%), Postives = 536/711 (75.39%), Query Frame = 0


Query: 110 MYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDY 169
           MYEKSHYVKAIKAC+DFKSKYPDI+LV E +F R APE IK+   S DS+H LM +RL++
Sbjct: 1   MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60

Query: 170 ELFQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTK 229
           EL QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN LG+  TK
Sbjct: 61  ELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTK 120

Query: 230 KLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGAST 289
           KLKQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+ KD+G S+
Sbjct: 121 KLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSS 180

Query: 290 NVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPK 349
           N ESS+LEDD PD+DDDGQRRRKRPKK+ ++   + AG+YQVHPLKI+LHIYD+E  + K
Sbjct: 181 NTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTK 240

Query: 350 SMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLS 409
           S+KL+ LKFE L KLN++CVG EGS +GPE NI CNLFPDD GLE PHQS KL++ +  +
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQT 300

Query: 410 FSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQT 469
           F + RTSRPYKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YRQQ+R+QT
Sbjct: 301 FDENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQT 360

Query: 470 VVQRLRSRKKAQLALVEQLDSLEKLKWPVLTCDNVPWASHKPSCSLQGWSLVGYATSQES 529
           V++R+R RKKA LAL EQLD L K + PV+ C++ PWA HK  C+L  W  +  + S+  
Sbjct: 361 VLRRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSC 420

Query: 530 SLTIMEKEKVRDPLDVDMLGKSGISREDIDGAREDGELPALVSSTSILDNAQPTPLRTPN 589
           SLT+   E+V +P+++D+ G+S   +ED +  REDGELP+LV++ + L ++  TP +  N
Sbjct: 421 SLTLNSVEQVPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSN 480

Query: 590 LEHSKQLTLISKSITPQTNYSRMLSFSKHDEDYELMLDVDSDQDEPM-QTELAADDVASI 649
              S+QL L++K++    +  +  SF K+++D +L+LD DS+ DEP  +TE   +++   
Sbjct: 481 QARSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPE 540

Query: 650 PSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNLKLQAKIKISMEYPLRSPFFTLNLYTIN 709
            +++    +W+DYGS+E+ LV +R TD   K  KL+A ++ISMEYPLR P F+L+L+  +
Sbjct: 541 KADN----SWVDYGSREFALVFSRKTDG-GKLWKLEAMVQISMEYPLRPPLFSLSLHASS 600

Query: 710 SEENRDESDDSDWYNELRAMEAEVNLHILKMLPLDQENYILSHQICCLEMLFNYCISEAS 769
           S  N + +++SD YNELRAMEAEVNLH+LK++P DQENY+LSHQI CL MLF+Y + + S
Sbjct: 601 SSGNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPS 660

Query: 770 RSSERKKSSSVIDVGLCKPVSGSIHARSFRGRDRRKMISWKDIECAPGYPC 819
             S+R  +++V+DVGLCKPV G +  RSFRGRD RKMISWK   CA GYPC
Sbjct: 661 PDSKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYPC 702

[Close]

BLAST of Carg10607-RA vs. TAIR 10
Match: AT1G45233.2 (THO complex, subunit 5 )

HSP 1 Score: 511.1 bits (1315), Expect = 1.6e-144
Identity = 276/461 (59.87%), Postives = 347/461 (75.27%), Query Frame = 0


Query: 24  TGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILL 83
           T + SP E+L+++K+SVE I+ KMLSIK+ G PK++ REL+TQMFL+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 84  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFCR 143
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+YP+I+L+SE +F  
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 144 DAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQHKKSLLEVIANRKKFLS 203
           DAPE IK+   S DS+H+LML+RL++EL QRKELCK R  LEQ KKSLLE  A R KFLS
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLS 191

Query: 204 SLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIE 263
           SLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A KEAF ENI+
Sbjct: 192 SLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENID 251

Query: 264 LEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNI 323
           +E+ GS+KDAQ +AR QA +      N ES +LE        D +R+RKR KK    V  
Sbjct: 252 VEVSGSLKDAQTYARQQAEQ------NSESLRLEVGV-----DEERQRKRLKK----VGS 311

Query: 324 EHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNIL 383
           +  G+YQVHPLK++LH+YD+E  +PKS +L+ LKFE L KLN++CVGIE S +G E NIL
Sbjct: 312 DEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNIL 371

Query: 384 CNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQES 443
           CNLFPDD+GLE PHQSAKL++     F   RTSRPYKWAQHLAGI+ LPE+ P  + +  
Sbjct: 372 CNLFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-- 431

Query: 444 ASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 485
              +   SD   G +       +QTV+QR+RS+KK +L LV
Sbjct: 432 ---DIQYSDTAKGYASASDHRNVQTVLQRIRSQKKTKLTLV 452

The following BLAST results are available for this feature:

BLAST of Carg10607-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037799.1	0.0e+00	100.00	THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608471.1	0.0e+00	99.88	THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982205.1	0.0e+00	99.14	THO complex subunit 5B [Cucurbita maxima]	[more]
XP_022940324.1	0.0e+00	99.14	THO complex subunit 5B [Cucurbita moschata]	[more]
XP_023524487.1	0.0e+00	98.90	THO complex subunit 5B [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg10607-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4J0	5.0e-268	59.23	THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1	[more]
F4HRC1	2.2e-143	59.87	THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1	[more]
Q5ZJK1	1.3e-42	29.94	THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1	[more]
Q6NY52	3.8e-42	28.79	THO complex subunit 5 homolog OS=Danio rerio OX=7955 GN=thoc5 PE=2 SV=1	[more]
Q13769	1.5e-41	28.95	THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2	[more]

BLAST of Carg10607-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J206	0.0e+00	99.14	THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1	[more]
A0A6J1FJR5	0.0e+00	99.14	THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1	[more]
A0A5A7VBI1	0.0e+00	91.44	THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3BTI6	0.0e+00	91.44	THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1	[more]
A0A0A0KZS2	0.0e+00	90.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1	[more]

BLAST of Carg10607-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42920.2	3.5e-269	59.23	THO complex, subunit 5	[more]
AT5G42920.1	1.7e-231	57.95	THO complex, subunit 5	[more]
AT1G45233.2	1.6e-144	59.87	THO complex, subunit 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
IPR019163	THO complex, subunit 5	PFAM	PF09766	FmiP_Thoc5	coord: 73..430 e-value: 7.2E-106 score: 354.6
IPR019163	THO complex, subunit 5	PANTHER	PTHR13375	FMS INTERACTING PROTEIN	coord: 16..816

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10607	Carg10607	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10607-RA:1	Carg10607-RA:1	exon
Carg10607-RA:2	Carg10607-RA:2	exon
Carg10607-RA:3	Carg10607-RA:3	exon
Carg10607-RA:4	Carg10607-RA:4	exon
Carg10607-RA:5	Carg10607-RA:5	exon
Carg10607-RA:6	Carg10607-RA:6	exon
Carg10607-RA:7	Carg10607-RA:7	exon
Carg10607-RA:8	Carg10607-RA:8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10607-RA:five_prime_utr	Carg10607-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10607-RA:cds	Carg10607-RA:cds	CDS
Carg10607-RA:cds	Carg10607-RA:cds_2	CDS
Carg10607-RA:cds	Carg10607-RA:cds_3	CDS
Carg10607-RA:cds	Carg10607-RA:cds_4	CDS
Carg10607-RA:cds	Carg10607-RA:cds_5	CDS
Carg10607-RA:cds	Carg10607-RA:cds_6	CDS
Carg10607-RA:cds	Carg10607-RA:cds_7	CDS
Carg10607-RA:cds	Carg10607-RA:cds_8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10607-RA:three_prime_utr	Carg10607-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10607-RA	Carg10607-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
cellular_component	GO:0000445	THO complex part of transcription export complex
molecular_function	GO:0003729	mRNA binding