Carg10114-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10114-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr17: 742473 .. 745452 (-)
Sequence length	987
RNA-Seq Expression	Carg10114-RA
Synteny	Carg10114-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGATCCAAATGAGTCTAGAATGGAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCATCTCCTTGTCCTGCCTCTTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGGTAATGGTTCTGTTGCTGTTTCTGGGACTAAACGAGCTGCTGATTCTGCTCCTAATGATGGAGGATCCCCCACTGCTCTCAAGTTAGTTCTGATTATCCCCTTTTGTTTGTTCTTATTAGCTATAAATTTACTGAAATTAAGATTGTTGTAAGGGAGTCCGACGTTGGCTAATTTAGAGAATGATCATGGGTTTATAATTAAGGAATGCATCTCCATTGGCATGAGATCTTTAGGGGAAGTCCAAAGCAAAGCCATGAGAGCTTATGTTCAAAGTGGACAATATCATGTCATTATGGAGTTTCGTGATTCCTAATATAGTATCTAACTTAGTCATGTCAATAGAATTCTCAAGTGTCGAACAAAGAAATTTCTAGCCTCGAAAGTGAAGTTGAAAGTGACTCATGTATCGAACAAAGGGTGTACTTTGTTCAGCGCTCTAGAGAAAGAAGTCGAGCCTCAATCAGGGGAGACTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATGGTTAGGAATATATCTCTATTGGTATGAGGCGTTTCCCCTGGGGAAACCAAAAGCAAAACCATGAGAGCTATTGCTCAAAGTGGACAATATCATGCCATTGTAGAGGTTCATGATTCCTAACATGGTATATAACTTAGCTATGTTAATAGAATTCTCAAGTGTCGAACAAAGAAATTGCTAGCCTCGAAGGTGTAGTCAAAAGTGACTCATGTGTCGAACAGATGGTGTACTTTGTTCGAGAGCTCTAGAGAAAGGAGTCGAGTCGAGTCGAGTCTCGATTAAGGGGAGGCTGTTTGAGAGCTACATAGACCTCAGGAGAGGCTCTATAGTGTACTTTGTTCAAGGGAAGATTGTTGAGGATGGTTAGGAATATATCGCTATTGGTATGAGGCATTTTGGGGAAACCAAAAGCAAAACCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGTCGTAATTCCTAACCGGAAAAAACGATGGATTAATTTAGACTTTTGAGTCGTTTTCTGTTTTCTGATGAGCTTGTTGTAAATGTTTGTTTGAAAATGGAAGCAGTCAGGTTGTGGGATGGCCACCCATTAGGACATACAGGATGAACAGCTTGGTGAACCAAGCAAAGACAGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAACATCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGTGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCGATGGTTAGCTCTTGAAATTTCCAGGAACAAATATGTTCACTTTTTGCTTTGATTTATTTGTATTGTCATGCTGTTCTTCAGGGAAAAGTGGAGACAAGGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTGACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGGTATGTTTCTTTGTAGTCTAGATCTAATATCTATGTCGGGTTATGATCAGCTATATCGATGCCCGGATGCACGGTTTCGACTCTTGGTTCTAAAAGCTGAGCTAGTTTGATGAAAATTGGCATACTTAGTTCTCTTTAGTTCATGGAGTTCAGCGAACGAGGAAGATAACTTACTAAACGGTTTGAGATTTGAGAGGATCGTTTGTGTATCTGATTTCAATTGTTTAGATCAATGCATCGTTGGCTCTTGGTTCTAAAGTCTTGCTATGTTTTAAACATTTGAATTGTGTCCTGTCATGTCCCATATTGGTTGGAGAGGAGAACAAAACACCTTTTATAAAAGTGTGAAAACCTTCCCCTAGCAGACGCGTTTTAAAGCTCTTGTTTCTAAAAGTCTTGCTATGTTTTAAACATTTGAACTGTGTCCCTGTGATGTCCAACATTGGTTAGGGAGGAGAACAAAACACCGTTTATAAGAGTGTGGAAACCTTCCCCTAGCATACGCGTTTTAAAGTCTCGAGGGAAAGCTCAAAGAAGAAAATATCTGCTAGCGGTGGGTCTGGGTTGTTGTAGTCCCACTTTTATGTTGTTCTTACAATAAGTTCATGACTTTCATTGATTAGGATGTTTTTGAGCTCTGTTCGAAGGCTTCGCATAATGAGGACGTCTGAAGCCAACGGACTAGGTATTCAATAAGCTCTTCTTGCGCTCGATTTCCTATCTTGTGCTCGTTTTACATGTTTCCTAAATCTAGCTTCATTGCAGCACCAAGATCTCAAGACAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGAAAACCGCTACTATATGGCTCGGCTCGGGTACGTCCTAGATATACCCGAACGTGAAAAATGCACAGTTTGACTAGAGAAAAGAAGTAGAGAAGAGAATGAGAAATGGATTGCTGTGGTTTTTGGTTTCTTTGTTGGGTTTAGTTTTGGTGTTTTGGGGTTTTGTTTTGGGAGGTTTGATAGGCCATATGATTTTACCATACAAAAGTGTATACTTTGGGTGGATGCTTTCTCATACTGTACATAAGGGAACAACACTTTGATTGATATCTATGGAGCTTTGTTTGTTGCAATCTATGGAGCTTTGT

mRNA sequence

ATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGATCCAAATGAGTCTAGAATGGAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCATCTCCTTGTCCTGCCTCTTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAACATCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGTGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCGATGGGAAAAGTGGAGACAAGGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTGACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGCACCAAGATCTCAAGACAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGAAAACCGCTACTATATGGCTCGGCTCGGGTACGTCCTAGATATACCCGAACGTGAAAAATGCACAGTTTGACTAGAGAAAAGAAGTAGAGAAGAGAATGAGAAATGGATTGCTGTGGTTTTTGGTTTCTTTGTTGGGTTTAGTTTTGGTGTTTTGGGGTTTTGTTTTGGGAGGTTTGATAGGCCATATGATTTTACCATACAAAAGTGTATACTTTGGGTGGATGCTTTCTCATACTGTACATAAGGGAACAACACTTTGATTGATATCTATGGAGCTTTGTTTGTTGCAATCTATGGAGCTTTGT

Coding sequence (CDS)

ATGGAATGTACTTTGGGCCTTTTCCGCACTTCTGGCGTTGGTGGGTCTGTTTCTGGGTCCGCCATTAACGATCCAAATGAGTCTAGAATGGAGATTTTTGAGAAAGATTTTGTGGGTAAGATTCCGATTGAGCCATCTCCTTGTCCTGCCTCTTCTGGCCTTGAATTGGGCCTTGGTTTAGCCGTTGGCGGCTGCGGGAAGGTTAGCGGTGGTACTTGGGGTGAGCGTGGTCGGATTTTGACTGCTCGGGATTTCCCTGTTCTTGGTGGCTCTTCTGTTTCTTCTTGTTCTTCCTCTTCTTGTTTCCATGGAAGAGAGGCCAGGGCTGAGGAAGATGAGCAGTCCAAGGACAACAAAACATCATGTGATGTTGATGGAAAAGGGCACCTAGGATTTGTCAAAGTGAATGTCGATGGTGTTGTCATAGGGAGGAAAGTGGATATCAATGCCCATTCTTGCTATGAGACCTTGGCCCTTATGCTGGAGGACATGTTTTTCAAGTCCGATGGGAAAAGTGGAGACAAGGAACAAGGACAGAAACTGTCTAAGCTTTTGGATGGATCCTCTGAGTTTGTGCTGACATATGAAGATAGAGAGGGGGATTGGATGCTTGTTGGAGATGTCCCTTGGAGCACCAAGATCTCAAGACAAGAAAGCGAAACAAAGGAGCAAGCCTATCTGAAAACCGCTACTATATGGCTCGGCTCGGGTACGTCCTAG

Protein sequence

MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKTSCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPWSTKISRQESETKEQAYLKTATIWLGSGTS

Homology

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BLAST of Carg10114-RA vs. NCBI nr
Match: KAG7013460.1 (Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483.8 bits (1244), Expect = 8.6e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKT 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKT
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKT 120

Query: 121 SCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQK 180
           SCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQK
Sbjct: 121 SCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQK 180

Query: 181 LSKLLDGSSEFVLTYEDREGDWMLVGDVPWSTKISRQESETKEQAYLKTATIWLGSGTS 240
           LSKLLDGSSEFVLTYEDREGDWMLVGDVPWSTKISRQESETKEQAYLKTATIWLGSGTS
Sbjct: 181 LSKLLDGSSEFVLTYEDREGDWMLVGDVPWSTKISRQESETKEQAYLKTATIWLGSGTS 239

[Close]

BLAST of Carg10114-RA vs. NCBI nr
Match: KAG6574888.1 (Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 210/265 (79.25%), Postives = 211/265 (79.62%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 ------------------------------------ARAEEDEQSKDNKTSCDVDGKGHL 180
                                               ARAEEDEQSKDNKT CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 216
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 240

[Close]

BLAST of Carg10114-RA vs. NCBI nr
Match: XP_022959103.1 (auxin-responsive protein IAA13-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 210/265 (79.25%), Postives = 211/265 (79.62%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 ------------------------------------ARAEEDEQSKDNKTSCDVDGKGHL 180
                                               ARAEEDEQSKDNKT CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 216
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 240

[Close]

BLAST of Carg10114-RA vs. NCBI nr
Match: XP_022959102.1 (auxin-responsive protein IAA13-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 210/266 (78.95%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 -------------------------------------ARAEEDEQSKDNKTSCDVDGKGH 180
                                                ARAEEDEQSKDNKT CDVDGKGH
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGH 180

Query: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS 216
           LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS
Sbjct: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS 240

[Close]

BLAST of Carg10114-RA vs. NCBI nr
Match: XP_023548751.1 (auxin-responsive protein IAA13-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 207/265 (78.11%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEI E+DFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEICERDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 ------------------------------------ARAEEDEQSKDNKTSCDVDGKGHL 180
                                               ARAEEDEQSKDNKT CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 216
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240

[Close]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36
Identity = 99/199 (49.75%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLG-----------GSSVS 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +G           GSS  
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPP 71

Query: 112 SCSS-------------SSCFHGREAR-AEEDEQSKDNKTSCD--------VDGKGHLGF 171
             SS             +S  + +  + A E+E++   K   D        V+GK  +GF
Sbjct: 72  RSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGF 131

Query: 172 VKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSD-GKSGDKEQGQKLSKLLDGSSEF 211
           +KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+++ G  G   Q  K  +LLDGSSEF
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

[Close]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-33
Identity = 98/207 (47.34%), Postives = 117/207 (56.52%), Query Frame = 0


Query: 38  VGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCS 97
           V ++ +  S  PA S LELGLGL++G      GG W ERGRILTA+DFP +G    +  S
Sbjct: 4   VSELEVGKSNLPAESELELGLGLSLG------GGAWKERGRILTAKDFPSVGSKRSAESS 63

Query: 98  S--------SSCFHG------------------REARAEEDEQSK---DNKTSCDVDGKG 157
           S        SS   G                  + ARAEE +  K    N    DV  K 
Sbjct: 64  SHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKV 123

Query: 158 H-----LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSK 211
           +     LGFVKVN+DGV IGRKVD+ AHS YE LA  LE+MFF   G +    +  K  +
Sbjct: 124 NPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTT--CREKVKPLR 183

[Close]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 63/139 (45.32%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 85  FPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKTSCDV-------DGKGHL-GFVKVN 144
           F V+G   +     +S F+  +    E +  K      DV       + KG + G+VKVN
Sbjct: 110 FGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVN 169

Query: 145 VDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEFVLTYE 204
           +DG VIGRKVD+NAH  Y+TLAL LE MF K             L KLLD S+E+ LTYE
Sbjct: 170 MDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSL-KLLDNSAEYQLTYE 229

Query: 205 DREGDWMLVGDVPWSTKIS 216
           DR+GDWMLVGDVPW   +S
Sbjct: 230 DRDGDWMLVGDVPWEMFVS 247

[Close]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 63/139 (45.32%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 85  FPVLGGSSVSSCSSSSCFHGREARAEEDEQSKDNKTSCDV-------DGKGHL-GFVKVN 144
           F V+G   +     +S F+  +    E +  K      DV       + KG + G+VKVN
Sbjct: 110 FGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVN 169

Query: 145 VDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSEFVLTYE 204
           +DG VIGRKVD+NAH  Y+TLAL LE MF K             L KLLD S+E+ LTYE
Sbjct: 170 MDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSL-KLLDNSAEYQLTYE 229

Query: 205 DREGDWMLVGDVPWSTKIS 216
           DR+GDWMLVGDVPW   +S
Sbjct: 230 DRDGDWMLVGDVPWEMFVS 247

[Close]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 80/227 (35.24%), Postives = 105/227 (46.26%), Query Frame = 0


Query: 14  GGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCG------- 73
           GGS SGSA    N+  +          +  E S  P  + LELGL L++G  G       
Sbjct: 3   GGSASGSASALSNDENL---------VVSCEDSSSPIGNELELGLTLSLGRKGYRDCRVY 62

Query: 74  -----KVSGGTWGERGRI----------LTARDFPVLGGSSVSSCSSSSCFHGREARAEE 133
                  S  +   R  +          + A    V+G   + +   +S  +  +A A E
Sbjct: 63  ADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATE 122

Query: 134 DE----QSKDNKTSCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFK 193
           D         NK   D     +  FVKV +DG+ IGRK+D+NAH CYE+L+  LE+MF K
Sbjct: 123 DPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLK 182

Query: 194 ----SDGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPW 211
               S     D      +  L DGSS  VLTYED+EGDWMLVGDVPW
Sbjct: 183 PKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPW 220

[Close]

BLAST of Carg10114-RA vs. ExPASy TrEMBL
Match: A0A6J1H4Z9 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107
Identity = 210/265 (79.25%), Postives = 211/265 (79.62%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 ------------------------------------ARAEEDEQSKDNKTSCDVDGKGHL 180
                                               ARAEEDEQSKDNKT CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 216
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 240

[Close]

BLAST of Carg10114-RA vs. ExPASy TrEMBL
Match: A0A6J1H3M4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 210/266 (78.95%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRESNGSVAVSGTKRAA 120

Query: 121 -------------------------------------ARAEEDEQSKDNKTSCDVDGKGH 180
                                                ARAEEDEQSKDNKT CDVDGKGH
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNKT-CDVDGKGH 180

Query: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS 216
           LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS
Sbjct: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS 240

[Close]

BLAST of Carg10114-RA vs. ExPASy TrEMBL
Match: A0A6J1L3Y4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 206/265 (77.74%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 ------------------------------------ARAEEDEQSKDNKTSCDVDGKGHL 180
                                               ARAEEDEQSKDNK +CDVDGKGHL
Sbjct: 121 DSAPNDGGSPTALNQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK-ACDVDGKGHL 180

Query: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSSE 216
           GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSSE
Sbjct: 181 GFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSSE 240

[Close]

BLAST of Carg10114-RA vs. ExPASy TrEMBL
Match: A0A6J1KUY3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 206/266 (77.44%), Postives = 210/266 (78.95%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           MECTLGLFRTSGVGGSVSGSAINDPNE RM+IFEKDFVGKIPIEPSPCPASSGLELGLGL
Sbjct: 1   MECTLGLFRTSGVGGSVSGSAINDPNEPRMKIFEKDFVGKIPIEPSPCPASSGLELGLGL 60

Query: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE-------------- 120
           AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGRE              
Sbjct: 61  AVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCSSSSCFHGREGNGSVAVSGTKRAA 120

Query: 121 -------------------------------------ARAEEDEQSKDNKTSCDVDGKGH 180
                                                ARAEEDEQSKDNK +CDVDGKGH
Sbjct: 121 DSAPNDGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEDEQSKDNK-ACDVDGKGH 180

Query: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSKLLDGSS 216
           LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS+GKSGDKEQGQKLSKLLDGSS
Sbjct: 181 LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSNGKSGDKEQGQKLSKLLDGSS 240

[Close]

BLAST of Carg10114-RA vs. ExPASy TrEMBL
Match: A0A0A0LKJ5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G170820 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.6e-74
Identity = 175/281 (62.28%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 1   MECTLGLFRTSGVGGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGL 60
           ME TLGLFR S +GGSVSGSAI D N S M+I +KDFVG IPI  SP PASS LELGLGL
Sbjct: 1   MESTLGLFRPSPLGGSVSGSAITDSNASTMDILQKDFVGNIPILSSPSPASSDLELGLGL 60

Query: 61  AV-GGCGKVSGGTWGERGRILTARDFPVLGGSS--VSSCSSSSCFHGRE----------- 120
           A+ GG GKV+G TWGERGRILTA+DFPV  GSS   SS SSSS FHGRE           
Sbjct: 61  ALGGGGGKVTGVTWGERGRILTAQDFPVHCGSSSTSSSSSSSSRFHGREVTCSVSVSGTK 120

Query: 121 ----------------------------------------ARAEED--------EQSKD- 180
                                                   ARAEE+        +QSKD 
Sbjct: 121 RAADSAPNEGGSPTALNSQVVGWPPIRTYRMNSLVNQAKTARAEEEDAGCEEKKDQSKDT 180

Query: 181 --NKTSCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKS------D 211
             NKT CDVDGKGHLGFVKVNVDGVVIGRKVD+NAHSCYETLALMLEDMFF+S      +
Sbjct: 181 LKNKT-CDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLEDMFFRSAGASITN 240

[Close]

BLAST of Carg10114-RA vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 98/198 (49.49%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLG-----------GSS-- 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +G           GSS  
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPP 71

Query: 112 ----------VSSCSSSSCFHGREAR-AEEDEQSKDNKTSCD--------VDGKGHLGFV 171
                     + S   +S  + +  + A E+E++   K   D        V+GK  +GF+
Sbjct: 72  RSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFI 131

Query: 172 KVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSD-GKSGDKEQGQKLSKLLDGSSEFV 211
           KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+++ G  G   Q  K  +LLDGSSEFV
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191

[Close]

BLAST of Carg10114-RA vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 99/199 (49.75%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLG-----------GSSVS 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +G           GSS  
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPP 71

Query: 112 SCSS-------------SSCFHGREAR-AEEDEQSKDNKTSCD--------VDGKGHLGF 171
             SS             +S  + +  + A E+E++   K   D        V+GK  +GF
Sbjct: 72  RSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGF 131

Query: 172 VKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSD-GKSGDKEQGQKLSKLLDGSSEF 211
           +KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+++ G  G   Q  K  +LLDGSSEF
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

[Close]

BLAST of Carg10114-RA vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 98/198 (49.49%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 52  SGLELGLGLAVGG-----CGKV-SGGTWGERGRILTARDFPVLG-----------GSS-- 111
           S LELGLGL++GG      GK   GG WGERGR+LTA+DFP +G           GSS  
Sbjct: 12  SELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAGSSPP 71

Query: 112 ----------VSSCSSSSCFHGREAR-AEEDEQSKDNKTSCD--------VDGKGHLGFV 171
                     + S   +S  + +  + A E+E++   K   D        V+GK  +GF+
Sbjct: 72  RSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFI 131

Query: 172 KVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSD-GKSGDKEQGQKLSKLLDGSSEFV 211
           KVN+DGV IGRKVD+NAHS YE LA  LEDMFF+++ G  G   Q  K  +LLDGSSEFV
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191

[Close]

BLAST of Carg10114-RA vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 98/207 (47.34%), Postives = 117/207 (56.52%), Query Frame = 0


Query: 38  VGKIPIEPSPCPASSGLELGLGLAVGGCGKVSGGTWGERGRILTARDFPVLGGSSVSSCS 97
           V ++ +  S  PA S LELGLGL++G      GG W ERGRILTA+DFP +G    +  S
Sbjct: 4   VSELEVGKSNLPAESELELGLGLSLG------GGAWKERGRILTAKDFPSVGSKRSAESS 63

Query: 98  S--------SSCFHG------------------REARAEEDEQSK---DNKTSCDVDGKG 157
           S        SS   G                  + ARAEE +  K    N    DV  K 
Sbjct: 64  SHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKV 123

Query: 158 H-----LGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFKSDGKSGDKEQGQKLSK 211
           +     LGFVKVN+DGV IGRKVD+ AHS YE LA  LE+MFF   G +    +  K  +
Sbjct: 124 NPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTT--CREKVKPLR 183

[Close]

BLAST of Carg10114-RA vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-22
Identity = 80/227 (35.24%), Postives = 105/227 (46.26%), Query Frame = 0


Query: 14  GGSVSGSAINDPNESRMEIFEKDFVGKIPIEPSPCPASSGLELGLGLAVGGCG------- 73
           GGS SGSA    N+  +          +  E S  P  + LELGL L++G  G       
Sbjct: 3   GGSASGSASALSNDENL---------VVSCEDSSSPIGNELELGLTLSLGRKGYRDCRVY 62

Query: 74  -----KVSGGTWGERGRI----------LTARDFPVLGGSSVSSCSSSSCFHGREARAEE 133
                  S  +   R  +          + A    V+G   + +   +S  +  +A A E
Sbjct: 63  ADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATE 122

Query: 134 DE----QSKDNKTSCDVDGKGHLGFVKVNVDGVVIGRKVDINAHSCYETLALMLEDMFFK 193
           D         NK   D     +  FVKV +DG+ IGRK+D+NAH CYE+L+  LE+MF K
Sbjct: 123 DPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLK 182

Query: 194 ----SDGKSGDKEQGQKLSKLLDGSSEFVLTYEDREGDWMLVGDVPW 211
               S     D      +  L DGSS  VLTYED+EGDWMLVGDVPW
Sbjct: 183 PKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPW 220

The following BLAST results are available for this feature:

BLAST of Carg10114-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013460.1	8.6e-133	100.00	Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6574888.1	2.1e-107	79.25	Auxin-responsive protein IAA13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959103.1	2.1e-107	79.25	auxin-responsive protein IAA13-like isoform X2 [Cucurbita moschata]	[more]
XP_022959102.1	2.8e-107	78.95	auxin-responsive protein IAA13-like isoform X1 [Cucurbita moschata]	[more]
XP_023548751.1	1.5e-105	78.11	auxin-responsive protein IAA13-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg10114-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38831	2.0e-36	49.75	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	3.6e-33	47.34	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]
A2XB18	7.0e-21	45.32	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	7.0e-21	45.32	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
Q38829	7.0e-21	35.24	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]

BLAST of Carg10114-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4Z9	1.0e-107	79.25	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1	[more]
A0A6J1H3M4	1.3e-107	78.95	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460198 PE=3 SV=1	[more]
A0A6J1L3Y4	1.3e-105	77.74	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1	[more]
A0A6J1KUY3	1.6e-105	77.44	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498932 PE=3 SV=1	[more]
A0A0A0LKJ5	2.6e-74	62.28	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G170820 PE=3 SV=1	[more]

BLAST of Carg10114-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33310.1	1.4e-37	49.49	auxin-induced protein 13	[more]
AT2G33310.2	1.4e-37	49.75	auxin-induced protein 13	[more]
AT2G33310.3	1.4e-37	49.49	auxin-induced protein 13	[more]
AT1G04550.2	2.6e-34	47.34	AUX/IAA transcriptional regulator family protein	[more]
AT4G28640.1	5.0e-22	35.24	indole-3-acetic acid inducible 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 109..211 e-value: 4.4E-32 score: 111.9
None	No IPR available	GENE3D	3.10.20.90		coord: 126..228 e-value: 3.1E-28 score: 99.7
None	No IPR available	PANTHER	PTHR31734:SF187	AUXIN-RESPONSIVE PROTEIN	coord: 116..211 coord: 22..100
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 132..216
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 22..100
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 116..211
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 130..223 score: 17.933834

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10114	Carg10114	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10114-RA:4	Carg10114-RA:4	exon
Carg10114-RA:3	Carg10114-RA:3	exon
Carg10114-RA:2	Carg10114-RA:2	exon
Carg10114-RA:1	Carg10114-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10114-RA:three_prime_utr	Carg10114-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10114-RA:cds	Carg10114-RA:cds_4	CDS
Carg10114-RA:cds	Carg10114-RA:cds_3	CDS
Carg10114-RA:cds	Carg10114-RA:cds_2	CDS
Carg10114-RA:cds	Carg10114-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10114-RA	Carg10114-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding