Carg07504-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07504-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA ligase
Location	Carg_Chr20: 7666528 .. 7668396 (+)
Sequence length	1869
RNA-Seq Expression	Carg07504-RA
Synteny	Carg07504-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATGTTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTAAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTATAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAGTTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGTGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCGATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTAGTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGGCCATTTATTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGACGACCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

mRNA sequence

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATGTTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTAAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTATAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAGTTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGTGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCGATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTAGTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGGCCATTTATTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGACGACCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

Coding sequence (CDS)

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATGTTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTAAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTATAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAGTTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGTGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCGATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTAGTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGGCCATTTATTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGACGACCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

Protein sequence

MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWPYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEMSDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA

Homology

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BLAST of Carg07504-RA vs. NCBI nr
Match: KAG7011065.1 (DNA ligase 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK
Sbjct: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 622

[Close]

BLAST of Carg07504-RA vs. NCBI nr
Match: KAG6607062.1 (DNA ligase 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1206.8 bits (3121), Expect = 0.0e+00
Identity = 613/624 (98.24%), Postives = 618/624 (99.04%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERY+HTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDR--P 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD   P
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540

Query: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSK 600
           F FPARDDIKKNVFLGNFDISSGQASKSSSPRGK TTTT+KSKASPGKRKRNLQGKPKSK
Sbjct: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGK-TTTTSKSKASPGKRKRNLQGKPKSK 600

Query: 601 SKKNSSLQSDGSKQSTITKFFGKA 623
           SKKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 SKKNSSLQSDGSKQSTITKFFGKA 623

[Close]

BLAST of Carg07504-RA vs. NCBI nr
Match: XP_022948738.1 (DNA ligase 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 609/622 (97.91%), Postives = 611/622 (98.23%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERY+HTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFDISSGQASKSSSPRGK   TTTKSKASPGKRKRNLQG    KSK
Sbjct: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGK---TTTKSKASPGKRKRNLQG----KSK 600

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 615

[Close]

BLAST of Carg07504-RA vs. NCBI nr
Match: XP_023523509.1 (DNA ligase 6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1188.3 bits (3073), Expect = 0.0e+00
Identity = 605/624 (96.96%), Postives = 611/624 (97.92%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKM VLRILGYGGE+GVFTEH +ESDVHVVGWNVLGE W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMKVLRILGYGGESGVFTEHENESDVHVVGWNVLGEFW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNF+RMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFDRMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDR--P 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD   P
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540

Query: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSK 600
           F FPARDDIKKNVFLGNFD+SSGQ SKSSSPRGK    T+KSKASPGKRKRNLQGKPKSK
Sbjct: 541 FTFPARDDIKKNVFLGNFDVSSGQDSKSSSPRGK---MTSKSKASPGKRKRNLQGKPKSK 600

Query: 601 SKKNSSLQSDGSKQSTITKFFGKA 623
           SKKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 SKKNSSLQSDGSKQSTITKFFGKA 621

[Close]

BLAST of Carg07504-RA vs. NCBI nr
Match: XP_022948739.1 (DNA ligase 6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.4e-291
Identity = 538/622 (86.50%), Postives = 539/622 (86.66%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFDISSGQASKSSSPRGK   TTTKSKASPGKRKRNLQG    KSK
Sbjct: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGK---TTTKSKASPGKRKRNLQG----KSK 543

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 543

[Close]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot
Match: F4HPZ9 (DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LIG6 PE=2 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 3.7e-162
Identity = 321/628 (51.11%), Postives = 411/628 (65.45%), Query Frame = 0


Query: 3   SESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFV 62
           S S  ++ L ++++  + +AI S S Q     P    P          P SK IP + F+
Sbjct: 15  SNSDNSETLNLNTTKLYSSAISSISPQFPSPKPTSSCP--------SIPNSKRIPNTNFI 74

Query: 63  VDAFSHAGE-FSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQS 122
           VD F    +  SV++FLSHFHSDHY+GLS +W KGII+CS  TARL+ E+L+VP  FV +
Sbjct: 75  VDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLVAEILQVPSQFVFA 134

Query: 123 LPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPVL 182
           LP+ + V IDG EV+LI+ANHCPGAVQFLFK+      FE+YVHTGDFRFCD M  DP L
Sbjct: 135 LPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEMRFDPFL 194

Query: 183 KTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIG 242
             F+G D VFLDTTYCNPKF+FPSQ+ES+ Y+V++I KI  E       VLFL+ATYV+G
Sbjct: 195 NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKISEE------KVLFLVATYVVG 254

Query: 243 KEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWP 302
           KEKIL++IA RC RKI+VDARKM++L +LG  GE G+FTE  +ESDVHVVGWNVLGE+WP
Sbjct: 255 KEKILVEIARRCKRKIVVDARKMSMLSVLGC-GEEGMFTEDENESDVHVVGWNVLGETWP 314

Query: 303 YFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYN 362
           YFRPNF +MN+IMVEKGY KVVGFVPTGWTYE+K   F+VR KDS+EIHLVPYSEHSNY+
Sbjct: 315 YFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYSEHSNYD 374

Query: 363 EIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR---- 422
           E+REF+KFLKP+RV+PTVG+D++K D K  +K++KHF GLVDEMAN+K+FL GF+R    
Sbjct: 375 ELREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQ 434

Query: 423 -GEMSDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLND---EEQKK 482
             E SD    + +  V E  EE +   E  G        + V S+   +L+D       +
Sbjct: 435 KNEKSDVDVVSHSAEVYE--EEEKNACEDGG--------ENVPSSRGPILHDTTPSSDSR 494

Query: 483 IIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGK 542
           ++ +LR+ LPAWVT++Q+L+LI +   N VD VSNFYE E E Y+  ASLP      Q  
Sbjct: 495 LLIKLRDSLPAWVTEEQMLDLIKKHAGNPVDIVSNFYEYEAELYKQ-ASLPTPSLNNQAV 554

Query: 543 VVDRPFIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQG 602
           + D         D++ N   G              PR       TK   SPGKR ++   
Sbjct: 555 LFDDDV-----TDLQPNPVKGICPDVQAIQKGFDLPR---KMNLTKGTISPGKRGKSSGS 608

Query: 603 KPKSKSKKNSSLQSDGSKQSTITKFFGK 622
           K   K+KK+   +  G  Q T+ KFF K
Sbjct: 615 KSNKKAKKDPKSKPVGPGQPTLFKFFNK 608

[Close]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot
Match: Q6PJP8 (DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3)

HSP 1 Score: 208.8 bits (530), Expect = 1.8e-52
Identity = 123/341 (36.07%), Postives = 190/341 (55.72%), Query Frame = 0


Query: 51   PQSKLIPKSRFVVDAFSH-AGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
            P  K IP + F VDAF +   E   +YFL+HFHSDHYAGLS  +    ++CS++T  LL 
Sbjct: 702  PFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFP-VYCSEITGNLLK 761

Query: 111  EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDF 170
              L V   ++  LPL    +++G +V+L+DANHCPGAV  LF +P+        +HTGDF
Sbjct: 762  NKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTV----ILHTGDF 821

Query: 171  RFCDSMIIDPVLKTFIGSD----AVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 230
            R       DP ++  + +D     ++LDTTYC+P++ FPSQ E I + +N       E+ 
Sbjct: 822  R------ADPSMERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAIN----TAFEAV 881

Query: 231  GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 290
                  L +  TY IGKEK+ L IA     K+ +   K   L+ L     N + T     
Sbjct: 882  TLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCS 941

Query: 291  SDVHVVGWNVLGESWPYFRPNFERMNDIMVEKG--YSKVVGFVPTGWTYEMKHKNFS--- 350
            S VH++         P  + NF+ +   + + G  Y++++ F PTGWT+  K    +   
Sbjct: 942  SLVHLL---------PMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI 1001

Query: 351  VRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTVGL 382
             ++K ++ I+ +PYSEHS+Y E++ FV++LKP++++PTV +
Sbjct: 1002 PQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1018

[Close]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot
Match: Q9JIC3 (DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 4.0e-52
Identity = 119/337 (35.31%), Postives = 190/337 (56.38%), Query Frame = 0


Query: 51   PQSKLIPKSRFVVDAFSHAG-EFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
            P  K IP + F VDAF +   E   +YFL+HFHSDHYAGLS  + +  ++CS++T  LL 
Sbjct: 688  PFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTRP-VYCSEITGNLLK 747

Query: 111  EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDF 170
            + L+V   +++ LP+    V+D  +V+L+DANHCPGA   LF++P+        +HTGDF
Sbjct: 748  KKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNG----AVILHTGDF 807

Query: 171  RFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMG 230
            R   SM    +    +    +FLDTTYC+P++ FPSQ E I++ +N       E+     
Sbjct: 808  RADPSMERSRLAGRKV--HTLFLDTTYCSPEYTFPSQQEVIQFAIN----TAFEAVTLNP 867

Query: 231  SVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVH 290
              L +  TY IGKEK+ L IA     K+ +   K   L+ L     + + T    +S VH
Sbjct: 868  RALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVH 927

Query: 291  VVGWNVLGESWPYFRPNFERMNDIMVEKG--YSKVVGFVPTGWTYE---MKHKNFSVRSK 350
            ++         P  + NF+ +   + + G  Y +++ F PTGWT+        +   +++
Sbjct: 928  LL---------PMMQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTR 987

Query: 351  DSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTVGL 382
             ++ I+ +PYSEHS+Y E++ FV++LKP++++PTV +
Sbjct: 988  GNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1004

[Close]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot
Match: Q5QJC4 (DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-51
Identity = 125/367 (34.06%), Postives = 196/367 (53.41%), Query Frame = 0


Query: 51  PQSKLIPKSRFVVDAFSHAG-EFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
           P  K IP + F VDAF +   E   +YFL+HFHSDHY GL+  +    ++C+ +T  L+ 
Sbjct: 631 PFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVFP-LYCNKITGNLVK 690

Query: 111 EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDF 170
             L+V   ++  LP+    +++G +V+L+DANHCPGA   LF +PS        +HTGDF
Sbjct: 691 SKLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSG----TAILHTGDF 750

Query: 171 RFCDSMIIDPVLKTFIGS--DAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGS 230
           R   SM   P L   IG     ++LDTTYC+P++ FPSQ E I++ VN       E    
Sbjct: 751 RADPSMERYPAL---IGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVN----TAFEMVTL 810

Query: 231 MGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESD 290
               L +  TY IGKEK+ L IA     K  +   K   L+ L     N + T +   + 
Sbjct: 811 NPRTLVVCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMNWDGTL 870

Query: 291 VHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYE---MKHKNFSVR 350
           +H++         P  + NF+ + D +    + + +V+ F PTGWTY    +   +   +
Sbjct: 871 LHIL---------PMMQINFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQ 930

Query: 351 SKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLV 410
           ++ ++ I+ +PYSEHS+Y E++ FV++LKP++++PTV +     D +    + KHF   +
Sbjct: 931 TRGNITIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVG----DWRARSLMEKHFRDWM 972

[Close]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot
Match: Q38961 (DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana OX=3702 GN=SNM1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-50
Identity = 122/340 (35.88%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +++PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Carg07504-RA vs. ExPASy TrEMBL
Match: A0A6J1GA61 (DNA ligase 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 SV=1)

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 609/622 (97.91%), Postives = 611/622 (98.23%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERY+HTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFDISSGQASKSSSPRGK   TTTKSKASPGKRKRNLQG    KSK
Sbjct: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGK---TTTKSKASPGKRKRNLQG----KSK 600

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 615

[Close]

BLAST of Carg07504-RA vs. ExPASy TrEMBL
Match: A0A6J1GAT6 (DNA ligase 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 538/622 (86.50%), Postives = 539/622 (86.66%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTDRSVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFDISSGQASKSSSPRGK   TTTKSKASPGKRKRNLQG    KSK
Sbjct: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGK---TTTKSKASPGKRKRNLQG----KSK 543

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 543

[Close]

BLAST of Carg07504-RA vs. ExPASy TrEMBL
Match: A0A6J1KFT7 (DNA ligase 6-like OS=Cucurbita maxima OX=3661 GN=LOC111492837 PE=4 SV=1)

HSP 1 Score: 1010.0 bits (2610), Expect = 4.3e-291
Identity = 532/622 (85.53%), Postives = 542/622 (87.14%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPL IDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLPIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFS+AGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSYAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVN+IQKIGG+SKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNIIQKIGGKSKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGE+GVFTEH SESDVHVVGWNVLGE W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGESGVFTEHESESDVHVVGWNVLGECW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNF+RMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFDRMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480
           SD IDE+ATMTVNEDLEEMETVSETCG+SM LSSLQEVGSTDR+VLNDEEQKKIIQELRE
Sbjct: 421 SDDIDESATMTVNEDLEEMETVSETCGTSMALSSLQEVGSTDRAVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRPFI 540

Query: 541 FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSKSK 600
           FPARDDIKKNVFLGNFD+SSGQASKSSSPRGK   TTTKSKASPGKRKRNLQGKPKSKSK
Sbjct: 541 FPARDDIKKNVFLGNFDVSSGQASKSSSPRGK---TTTKSKASPGKRKRNLQGKPKSKSK 547

Query: 601 KNSSLQSDGSKQSTITKFFGKA 623
           KNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KNSSLQSDGSKQSTITKFFGKA 547

[Close]

BLAST of Carg07504-RA vs. ExPASy TrEMBL
Match: A0A5A7VEZ9 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00160 PE=3 SV=1)

HSP 1 Score: 974.9 bits (2519), Expect = 1.5e-280
Identity = 503/634 (79.34%), Postives = 544/634 (85.80%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESST KPLAIDSSL FVTAIESFSRQLNLSLPPLKLPFRPPP P+DFPQSKLIP SR
Sbjct: 1   MASESSTPKPLAIDSSLCFVTAIESFSRQLNLSLPPLKLPFRPPPFPSDFPQSKLIPNSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAF HAG++S+SYFLSHFHSDHY GLSPTWCKGIIFCS +TARLLLEVLKVPLPFV 
Sbjct: 61  FVVDAFGHAGDYSLSYFLSHFHSDHYGGLSPTWCKGIIFCSHLTARLLLEVLKVPLPFVH 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
            LPLR+P  IDGCEVIL+DANHCPGAVQFLFKIP  D KFERYVHTGDFRF DSM +DPV
Sbjct: 121 PLPLRQPTTIDGCEVILVDANHCPGAVQFLFKIPCGDGKFERYVHTGDFRFFDSMRVDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           L+ FIGSDAVFLDTTYCNPKF FPSQ+ESIEYIVN+IQ+ GG SKGSMG+VLFL+ATYVI
Sbjct: 181 LERFIGSDAVFLDTTYCNPKFSFPSQEESIEYIVNIIQQTGGASKGSMGNVLFLVATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLR+LGY GE+GVFTEH SESDVHVVGWNVLGE+W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRVLGY-GESGVFTEHESESDVHVVGWNVLGETW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           P+FRPNF R+ DIMVEKGYSKVVGFVPTGWTYE+KH  FSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PFFRPNFVRIKDIMVEKGYSKVVGFVPTGWTYELKHNKFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR--G 420
           NE+RE+VKFL+P+RVVPTVGLDVDKLDSKHADKI+KHF GLVDEMANRKEFLKGFHR  G
Sbjct: 361 NELREYVKFLRPKRVVPTVGLDVDKLDSKHADKIKKHFAGLVDEMANRKEFLKGFHRGSG 420

Query: 421 EMSDGIDETATMTVNE--DLEEMETVS--------ETCGSSMVLSSLQEVGSTDRSVLND 480
           EMSD +DE AT    E  + EE E  S        +   S M LSSLQEVG T+    ND
Sbjct: 421 EMSDDVDENATKAETEFQEFEEKEISSCMNISVKTDASNSGMGLSSLQEVGCTNLFESND 480

Query: 481 EEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLP 540
            EQ+KIIQELRECLPAWVTQDQIL+LIS SGRNVVDAVSNFYE+ETEFYEH+++L D  P
Sbjct: 481 GEQQKIIQELRECLPAWVTQDQILDLISSSGRNVVDAVSNFYERETEFYEHVSTLTDICP 540

Query: 541 KFQGKVVDRPFIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRK 600
           K+  K+ D PF FPA D+ KK V LG  D SSG ASKSSSPRG     T K+K SPGKRK
Sbjct: 541 KYPSKISDSPFTFPATDN-KKVVILGKVDTSSGHASKSSSPRG-----TAKTKTSPGKRK 600

Query: 601 RNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA 623
           RN Q KPK+KS+KN SL S GSKQSTITKFF KA
Sbjct: 601 RNFQDKPKNKSRKNLSLHSGGSKQSTITKFFRKA 627

[Close]

BLAST of Carg07504-RA vs. ExPASy TrEMBL
Match: A0A1S3B9K7 (uncharacterized protein LOC103487505 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103487505 PE=3 SV=1)

HSP 1 Score: 974.9 bits (2519), Expect = 1.5e-280
Identity = 503/634 (79.34%), Postives = 544/634 (85.80%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESST KPLAIDSSL FVTAIESFSRQLNLSLPPLKLPFRPPP P+DFPQSKLIP SR
Sbjct: 1   MASESSTPKPLAIDSSLCFVTAIESFSRQLNLSLPPLKLPFRPPPFPSDFPQSKLIPNSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAF HAG++S+SYFLSHFHSDHY GLSPTWCKGIIFCS +TARLLLEVLKVPLPFV 
Sbjct: 61  FVVDAFGHAGDYSLSYFLSHFHSDHYGGLSPTWCKGIIFCSHLTARLLLEVLKVPLPFVH 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180
            LPLR+P  IDGCEVIL+DANHCPGAVQFLFKIP  D KFERYVHTGDFRF DSM +DPV
Sbjct: 121 PLPLRQPTTIDGCEVILVDANHCPGAVQFLFKIPCGDGKFERYVHTGDFRFFDSMRVDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           L+ FIGSDAVFLDTTYCNPKF FPSQ+ESIEYIVN+IQ+ GG SKGSMG+VLFL+ATYVI
Sbjct: 181 LERFIGSDAVFLDTTYCNPKFSFPSQEESIEYIVNIIQQTGGASKGSMGNVLFLVATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLR+LGY GE+GVFTEH SESDVHVVGWNVLGE+W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRVLGY-GESGVFTEHESESDVHVVGWNVLGETW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           P+FRPNF R+ DIMVEKGYSKVVGFVPTGWTYE+KH  FSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PFFRPNFVRIKDIMVEKGYSKVVGFVPTGWTYELKHNKFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR--G 420
           NE+RE+VKFL+P+RVVPTVGLDVDKLDSKHADKI+KHF GLVDEMANRKEFLKGFHR  G
Sbjct: 361 NELREYVKFLRPKRVVPTVGLDVDKLDSKHADKIKKHFAGLVDEMANRKEFLKGFHRGSG 420

Query: 421 EMSDGIDETATMTVNE--DLEEMETVS--------ETCGSSMVLSSLQEVGSTDRSVLND 480
           EMSD +DE AT    E  + EE E  S        +   S M LSSLQEVG T+    ND
Sbjct: 421 EMSDDVDENATKAETEFQEFEEKEISSCMNISVKTDASNSGMGLSSLQEVGCTNLFESND 480

Query: 481 EEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLP 540
            EQ+KIIQELRECLPAWVTQDQIL+LIS SGRNVVDAVSNFYE+ETEFYEH+++L D  P
Sbjct: 481 GEQQKIIQELRECLPAWVTQDQILDLISSSGRNVVDAVSNFYERETEFYEHVSTLTDICP 540

Query: 541 KFQGKVVDRPFIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRK 600
           K+  K+ D PF FPA D+ KK V LG  D SSG ASKSSSPRG     T K+K SPGKRK
Sbjct: 541 KYPSKISDSPFTFPATDN-KKVVILGKVDTSSGHASKSSSPRG-----TAKTKTSPGKRK 600

Query: 601 RNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA 623
           RN Q KPK+KS+KN SL S GSKQSTITKFF KA
Sbjct: 601 RNFQDKPKNKSRKNLSLHSGGSKQSTITKFFRKA 627

[Close]

BLAST of Carg07504-RA vs. TAIR 10
Match: AT1G66730.1 (DNA LIGASE 6 )

HSP 1 Score: 573.2 bits (1476), Expect = 2.6e-163
Identity = 321/628 (51.11%), Postives = 411/628 (65.45%), Query Frame = 0


Query: 3   SESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFV 62
           S S  ++ L ++++  + +AI S S Q     P    P          P SK IP + F+
Sbjct: 15  SNSDNSETLNLNTTKLYSSAISSISPQFPSPKPTSSCP--------SIPNSKRIPNTNFI 74

Query: 63  VDAFSHAGE-FSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQS 122
           VD F    +  SV++FLSHFHSDHY+GLS +W KGII+CS  TARL+ E+L+VP  FV +
Sbjct: 75  VDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLVAEILQVPSQFVFA 134

Query: 123 LPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPVL 182
           LP+ + V IDG EV+LI+ANHCPGAVQFLFK+      FE+YVHTGDFRFCD M  DP L
Sbjct: 135 LPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEMRFDPFL 194

Query: 183 KTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIG 242
             F+G D VFLDTTYCNPKF+FPSQ+ES+ Y+V++I KI  E       VLFL+ATYV+G
Sbjct: 195 NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKISEE------KVLFLVATYVVG 254

Query: 243 KEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWP 302
           KEKIL++IA RC RKI+VDARKM++L +LG  GE G+FTE  +ESDVHVVGWNVLGE+WP
Sbjct: 255 KEKILVEIARRCKRKIVVDARKMSMLSVLGC-GEEGMFTEDENESDVHVVGWNVLGETWP 314

Query: 303 YFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYN 362
           YFRPNF +MN+IMVEKGY KVVGFVPTGWTYE+K   F+VR KDS+EIHLVPYSEHSNY+
Sbjct: 315 YFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYSEHSNYD 374

Query: 363 EIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR---- 422
           E+REF+KFLKP+RV+PTVG+D++K D K  +K++KHF GLVDEMAN+K+FL GF+R    
Sbjct: 375 ELREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQ 434

Query: 423 -GEMSDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLND---EEQKK 482
             E SD    + +  V E  EE +   E  G        + V S+   +L+D       +
Sbjct: 435 KNEKSDVDVVSHSAEVYE--EEEKNACEDGG--------ENVPSSRGPILHDTTPSSDSR 494

Query: 483 IIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGK 542
           ++ +LR+ LPAWVT++Q+L+LI +   N VD VSNFYE E E Y+  ASLP      Q  
Sbjct: 495 LLIKLRDSLPAWVTEEQMLDLIKKHAGNPVDIVSNFYEYEAELYKQ-ASLPTPSLNNQAV 554

Query: 543 VVDRPFIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQG 602
           + D         D++ N   G              PR       TK   SPGKR ++   
Sbjct: 555 LFDDDV-----TDLQPNPVKGICPDVQAIQKGFDLPR---KMNLTKGTISPGKRGKSSGS 608

Query: 603 KPKSKSKKNSSLQSDGSKQSTITKFFGK 622
           K   K+KK+   +  G  Q T+ KFF K
Sbjct: 615 KSNKKAKKDPKSKPVGPGQPTLFKFFNK 608

[Close]

BLAST of Carg07504-RA vs. TAIR 10
Match: AT3G26680.1 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-51
Identity = 122/340 (35.88%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +++PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Carg07504-RA vs. TAIR 10
Match: AT3G26680.2 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-51
Identity = 122/340 (35.88%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +++PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Carg07504-RA vs. TAIR 10
Match: AT3G26680.3 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-51
Identity = 122/340 (35.88%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +++PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Carg07504-RA vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-51
Identity = 122/340 (35.88%), Postives = 185/340 (54.41%), Query Frame = 0


Query: 51  PQSKLIPKSRFVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLE 110
           P    IP + F VDAF +       +FL+HFH DHY GL+ ++  G I+CS VTA+L+  
Sbjct: 393 PHWNCIPGTPFRVDAFKYLTRDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNM 452

Query: 111 VLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFR 170
            + +P   +Q L L + V I G +V   DANHCPG++  LF+  +     +  +HTGDFR
Sbjct: 453 KIGIPWERLQVLDLGQKVNISGIDVTCFDANHCPGSIMILFEPANG----KAVLHTGDFR 512

Query: 171 FCDSMIIDPVLKTFIGS--DAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSM 230
           + + M         IGS   ++ LDTTYCNP++ FP Q+  I+++V  IQ      K   
Sbjct: 513 YSEEM-----SNWLIGSHISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPK--- 572

Query: 231 GSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGEN-GVFTEHGSESD 290
              LFLI +Y IGKE++ L++A     KI ++  K+ +L  LG+  ++   FT    ES 
Sbjct: 573 --TLFLIGSYTIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESH 632

Query: 291 VHVVG-WNVLGESWPYFRPNFERMNDI--MVEKGYSKVVGFVPTGWTYEMKHKNFSVR-- 350
           +HVV  W +          +F+R+  +       YS +V F PTGWT     K    R  
Sbjct: 633 IHVVPLWTL---------ASFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPGRRL 692

Query: 351 SKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRVVPTVGLD 383
            + ++  + VPYSEHS++ E++EFV+ + P  ++P+V  D
Sbjct: 693 QQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNND 709

The following BLAST results are available for this feature:

BLAST of Carg07504-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011065.1	0.0e+00	100.00	DNA ligase 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607062.1	0.0e+00	98.24	DNA ligase 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948738.1	0.0e+00	97.91	DNA ligase 6-like isoform X1 [Cucurbita moschata]	[more]
XP_023523509.1	0.0e+00	96.96	DNA ligase 6-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022948739.1	2.4e-291	86.50	DNA ligase 6-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg07504-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPZ9	3.7e-162	51.11	DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LIG6 PE=2 SV=1	[more]
Q6PJP8	1.8e-52	36.07	DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3	[more]
Q9JIC3	4.0e-52	35.31	DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2	[more]
Q5QJC4	2.6e-51	34.06	DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1	[more]
Q38961	2.2e-50	35.88	DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana OX=3702 GN=SNM1 PE=2 ...	[more]

BLAST of Carg07504-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA61	0.0e+00	97.91	DNA ligase 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 ...	[more]
A0A6J1GAT6	1.1e-291	86.50	DNA ligase 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 ...	[more]
A0A6J1KFT7	4.3e-291	85.53	DNA ligase 6-like OS=Cucurbita maxima OX=3661 GN=LOC111492837 PE=4 SV=1	[more]
A0A5A7VEZ9	1.5e-280	79.34	DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00160 PE=...	[more]
A0A1S3B9K7	1.5e-280	79.34	uncharacterized protein LOC103487505 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg07504-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66730.1	2.6e-163	51.11	DNA LIGASE 6	[more]
AT3G26680.1	1.6e-51	35.88	DNA repair metallo-beta-lactamase family protein	[more]
AT3G26680.2	1.6e-51	35.88	DNA repair metallo-beta-lactamase family protein	[more]
AT3G26680.3	1.6e-51	35.88	DNA repair metallo-beta-lactamase family protein	[more]
AT2G45700.1	2.7e-51	35.88	sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011084	DNA repair metallo-beta-lactamase	PFAM	PF07522	DRMBL	coord: 277..380 e-value: 1.4E-19 score: 70.3
None	No IPR available	GENE3D	3.40.50.12650		coord: 202..357 e-value: 2.7E-84 score: 285.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 597..622
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 560..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 582..596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 560..622
None	No IPR available	PANTHER	PTHR23240:SF24	DNA LIGASE	coord: 5..621
None	No IPR available	PANTHER	PTHR23240	DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED	coord: 5..621
None	No IPR available	CDD	cd16273	SNM1A-1C-like_MBL-fold	coord: 41..199 e-value: 1.08224E-70 score: 223.571
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 56..379 e-value: 2.7E-84 score: 285.1
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 76..380

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg07504	Carg07504	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07504-RA:1	Carg07504-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07504-RA:cds	Carg07504-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg07504-RA	Carg07504-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006266	DNA ligation
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003910	DNA ligase (ATP) activity