Carg06635-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06635-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TIFY 6B
LocationCarg_Chr18: 356935 .. 361590 (-)
Sequence length1473
RNA-Seq ExpressionCarg06635-RA
SyntenyCarg06635-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATTTTTTTGAATAAAAAGACGTGCTTCTCTCGCTTTCCTCTCGCATTGATATTAAAAAGCGCTGAAATTCTCTCGTATTTTTTTCTCTCTGCCTATTTCTCTCTCAGTGCGCGCTTCACTTTCATGGTCTTGGAGCTCGAAACTGGCTCGATTCTTCATCGCTTCGAAACTCTGCAGGTATTTTTTCGGCGTTAATTCTTTCGAGGATTTCGAATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGTATGTTCATGTCTCGTCTTCTTCATCATCGTCTTGTTCATCTGTTTCGATTTCCATGGAAGTTTTGTTTGATATCTTGGAAATCTGTTTGGTGAATTTGATACTCGGAAATGTCTCTGCTAGGGCTTAAGTTTGTTGTATCAACGAAATTTCTTTTGGAAAACAGGAAGAGTTAGAGAAGAAATGAAGATTGAGGAAATTATTGTATGAATTTAGAATTTATTTTCTCAGGAACCAAACAGAAAATTAGAAAGGAAAATCTGTTAGAATAGGCGTAAAAACCACGTTTCGCACGCTGTACCGAAATGTAAATTTGATGTGCAAAAGAACTGACAAGCCAAAAAGTTTTTGGGGGAATTTTTTATATTAAAAATAATTGTTTTTAAAAATACATGAATTAAAATATTATTATTTGTGTACTGCGTATAATTTTAATTTTGTTGGAATTTTTTAAATAGGGAAAATGTGAAAATTTGGAAAATAATTTATTAAATTAATCAATGAATTTTGTTCTACATTAATTTAAACTTAACTTTAATCGTTTAATTTATGTATTAAAGAACAGTGACGTGGCAATTTCAGTGCGGTATAAAAGAATAATAACAATAAATAAATAGATAATACAGCTGGATAGCTGCAATGATCATATTAACAATTAAATACTTCAATCCCGTGGTAAACACTCGGTTTATTTTTTTAAAAGAAAAATTAAAGTTTTTTTAATCACACGTCGGTGTGGGTCTTCATTATAATAATGAATCATGGCGATGTAATATTTATTTATTTATTTTTGAAGTTTTTAAGATTTTTTCCGTTAATCTCCCAAGATTATTGATCATAGGATTGTGGATTGAAATTTGATTGGTTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGGTTTCACTTTCTTCATTTTGTTCTTGATTATGCTCTGAATCTGCAATTCTCTGTTTTTTGATTTGTAGTCATCAATGGCTTGGACTCTGTTCATTGATTTGAAGTTGGTGATTTTGTCTTTTGTTTGTAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGTACTTGTTTTTCAAGATGGAGTTGTGAAAGATGTCAAAGCCTAAATGTCTTGAAAATTGATGCTTACTTTTCTTTGTAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGTTTGTGTTTATAATGATGTATCTCCTGAGAAGGTATCTGTTCCTTTAGAAACTCTAATTTCGTTTTGCCTTCTCACCACTTGGGGAAGAATTGTGAGATCCCACGTCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAAACCTCTCTCTAGAAGATGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAACGGAAAACCCAAAGAAGACAATATCTGCTAGTGGTGGGCGATGTGCCAACGAGGACATTGAGTCCCGAAAGGGGGTGGACAAGAGAAGGTGTGCCAGCAAGGACACTGGGCCTCAAAAGGAGGTGGATTGGGGGGTTCCACGTCGATTAGAGAAGGGATCGAGTGTCAGCCAAGATACTGGAACTCGAAAGGGGGTGGATTGGGGGGTTCCACGTCGATTAGAGAAGGGATCGAGTGTCAGCCATGATACTGGAACTCGAAAGGGGGTGGATTATGAGATCCTATATCTGTTGGGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACGCATTTTAAGAACCTTGAGGGAAAACCCGAAAGAAGACAATATCTGTTGACGGTCGGATTTACAAGAATCAATTCTCAGTTCTTGTTGTTTGATGTTTCTATTCAGGCTCAGGCTATAATGCTTCTGGCTGGCACTGGTGGGCTGCCTCAAACAGAAAACAACATACATCCCACCGGTCAAATGAAGGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGGTATAAAGCCACTTCACTCTACTCTAGTCCATATTTTTCCAGAAGTAATGATTTAAACAACAAACATGCTGACATTCCTCCTATCACCTCCTCCCTACAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGGTGAGTTTTCAACCTGGTTCTTTTACTTGAGTGTTTAGTTCTACTTCGACTCGGAATCTCACGAGTTCGTTCTCATGTTGTTTTAGGATAAACACATGCCCCTACAATATTGGAAAGAAAGCATCAGACTGTTCATCCACAACCTTGGATCTGATGGCCTGATGTCTCTCTCGCTTTGGACATACAAAATCGGTTTGTCCTCCATATTAGAGAATTGGATATAAAGCAAAATTTGTCAATCTGTTAGCTTAGATTGATTCTTGGTTTTGTTTTTTTTTTTTATATAATTTTCTTTTGTTCAATTGAAAAGCGCAGTTATTAGTTTCGATTGAACAATATGTAACTTAGTTGCTCCATGTTTATGTAAAATATTGCTTTTTATTTACACCCAGAGAAAAAAAAATGGGATGATATTTTGTATGTAAAACTATTCTGAATGATTCTATATTGTTCTTTCCTCTACTTGAAAACGTGATAGAGAATCAAACTGAAAATGTTTCTCTCTTGGTCCCATTCATCACATGCTGAGAACATTTTGGCTGTGTTCTTTATGATCTTTCTCTCTCTCTCTCTAGACTGTTCTTTAGTGTTCACATGTTCTTTTAAATTTCGAATGAGGAATAATTCCCACAAGAAAAAGTACTTTCGACCAAATATAGAGAAGAGCTTTGGCCATTCCCAGATATTTCTTGTTTCTCTGGATTTACACCAGATTTCCTCGTTGTCTATATTTATTTTGTAACCGCCCAAGTCCACCGCTAGTAGATATTGTCCTCTATTATAGGTTTTTCTTTTCGGGTTTTCCCTTAAAGTTCTTAAAACGCGCTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCTCCTTCCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGGGGTCCAGCGTCCTTGCTGGCATTCGTTCCCTTCTCCGAACTATGTGGGACCCCCCTTCTCCCCCAATCCACCCCCTTCGAGGCACAATGCCCTTGCAGGTACACCGCCTTGTGTCCACATTACCCGATGTCTGGCTCTGATACCATTTGTAACAGTCTAATTCCACCAATATAGCAGATATTGGAAACGAAAGAAAAAACTAGCTGTGTTTGTTGAACTGCGTTGATAGGTAAAATGAAAACTGACATTTAGAATTTCAAGTATAAACATTCTCATGAGCTTGGTCTGAGTATGCATTGCTTTGCTTAAACTTGCTCAAAATGACTTAGCTTGTTTCTTGTTTTTTTGATTCAGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAGAGAGATACAAAGATGATGCTTGCTTCATTTCCTCTCATTCTTGGAGTAAAATCTAAGAACCACATAGAAGAACAGCCGGTAAAGCACCCCCCAAGCTAGTAAGATACCAATGTCATACCATATATTTCGCATATTAACGTCCATCGAGAACAGAACGTCTTCTCCGATCAGCATGCAGTTTGGCTGCAAATCTCTAGAAACATTGTGCAGCTTGCTAATCCTAACATCTCCCAACGGCCCGGGCGAAAGATCGTTGGGATTTCCCTGATAACATCTTTTCCCTTTGAATTCATTGATCAACA

mRNA sequence

ATTTATTTTTTTGAATAAAAAGACGTGCTTCTCTCGCTTTCCTCTCGCATTGATATTAAAAAGCGCTGAAATTCTCTCGTATTTTTTTCTCTCTGCCTATTTCTCTCTCAGTGCGCGCTTCACTTTCATGGTCTTGGAGCTCGAAACTGGCTCGATTCTTCATCGCTTCGAAACTCTGCAGGTATTTTTTCGGCGTTAATTCTTTCGAGGATTTCGAATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAGAGAGATACAAAGATGATGCTTGCTTCATTTCCTCTCATTCTTGGAGTAAAATCTAAGAACCACATAGAAGAACAGCCGGTAAAGCACCCCCCAAGCTAGTAAGATACCAATGTCATACCATATATTTCGCATATTAACGTCCATCGAGAACAGAACGTCTTCTCCGATCAGCATGCAGTTTGGCTGCAAATCTCTAGAAACATTGTGCAGCTTGCTAATCCTAACATCTCCCAACGGCCCGGGCGAAAGATCGTTGGGATTTCCCTGATAACATCTTTTCCCTTTGAATTCATTGATCAACA

Coding sequence (CDS)

ATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAG

Protein sequence

MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQARKASLTRFLEKRKERLWKAILVALQSSTYSHSKA
Homology
[Close]
BLAST of Carg06635-RA vs. NCBI nr
Match: KAG7012156.1 (Protein TIFY 6B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 605.9 bits (1561), Expect = 2.0e-169
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST 180

Query: 181 ELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKI 240
           ELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKI
Sbjct: 181 ELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKI 240

Query: 241 ELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQARKASLTRFLEKRKERLW 300
           ELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQARKASLTRFLEKRKERLW
Sbjct: 241 ELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQARKASLTRFLEKRKERLW 300

Query: 301 KAILVALQSSTYSHSKA 318
           KAILVALQSSTYSHSKA
Sbjct: 301 KAILVALQSSTYSHSKA 317

[Close]
BLAST of Carg06635-RA vs. NCBI nr
Match: KAG6572975.1 (Protein TIFY 6B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552.0 bits (1421), Expect = 3.4e-153
Identity = 298/337 (88.43%), Postives = 299/337 (88.72%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGST 180

Query: 181 ELRNASKPPGSTPQLTIFYAGS-------------------------------------- 240
           ELRNASKPPGSTPQLTIFYAGS                                      
Sbjct: 181 ELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNIHPTGQMK 240

Query: 241 ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPP 300
           ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPP
Sbjct: 241 ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPP 300

[Close]
BLAST of Carg06635-RA vs. NCBI nr
Match: XP_022955298.1 (protein TIFY 6B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 544.3 bits (1401), Expect = 7.1e-151
Identity = 296/338 (87.57%), Postives = 298/338 (88.17%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. NCBI nr
Match: XP_023542531.1 (protein TIFY 6B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 295/338 (87.28%), Postives = 298/338 (88.17%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. NCBI nr
Match: XP_022994524.1 (protein TIFY 6B-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 538.1 bits (1385), Expect = 5.1e-149
Identity = 293/338 (86.69%), Postives = 297/338 (87.87%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGM+WAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMKWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNV+LQ FGGVPIATSVSVP TSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVSLQPFGGVPIATSVSVPLTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNIHPTGQM 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGL SPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLPSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match: Q9LVI4 (Protein TIFY 6B OS=Arabidopsis thaliana OX=3702 GN=TIFY6B PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 122/348 (35.06%), Postives = 168/348 (48.28%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSK----NSGMQWAFSNKVSA-LPQLLSFKAAQDEKQ 60
           MERDFLGL SKN  +  +E+ S+SS+    N GM W+FSNKVSA   Q LSF+  Q+++ 
Sbjct: 1   MERDFLGLGSKNSPITVKEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDRH 60

Query: 61  RKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDV 120
           RK           S   H P+S     + V D     + A    P+ +         Q V
Sbjct: 61  RK-----------SGNYHLPHSGSFMPSSVADVYDSTRKA----PYSS--------VQGV 120

Query: 121 KMFPISNQTKTNNAVPVAFNVPVFQS-QLVSSGQAVVGSNVNLQ-FGGVPI-ATSVSV-P 180
           +MFP SNQ +  NA  V+ ++P FQS      G++ + +N N Q   GVPI A  +S+ P
Sbjct: 121 RMFPNSNQHEETNA--VSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILP 180

Query: 181 FTSSVIGSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLG--------LS 240
              S++G+T++R++SKP GS  QLTIFYAGS         E  + + LL         + 
Sbjct: 181 PPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVF 240

Query: 241 SPPS-----VAHSK-------------------SPNAGLGS----CSKIELPAAPKRMQT 300
           SPP      V H++                   SP AG  +     +K            
Sbjct: 241 SPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNN 300

[Close]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match: Q58G47 (Protein TIFY 6A OS=Arabidopsis thaliana OX=3702 GN=TIFY6A PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13
Identity = 102/327 (31.19%), Postives = 142/327 (43.43%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFS-DSSKNSG-MQWAFSNKVSALPQLLSFKAAQDEKQRKI 60
           MERDFLGL SK   +  +E+ + DS+ + G M W+FS+KV + PQ LSF  +Q E +   
Sbjct: 1   MERDFLGLGSKLSPITVKEETNEDSAPSRGMMDWSFSSKVGSGPQFLSFGTSQQETRVNT 60

Query: 61  VVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMF 120
           V D L+SS   +   R Y S +Q++                                ++F
Sbjct: 61  VNDHLLSSAAMDQNQRTYFSSLQED--------------------------------RVF 120

Query: 121 PISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVI 180
           P S+Q +    + V+ + P +           + S +N Q  GG PI      P  S   
Sbjct: 121 PGSSQ-QDQTTITVSMSEPNY-----------INSFINHQHLGGSPI----MAPPVSVFP 180

Query: 181 GSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLGLSSPPS--VAHSKSPN 240
             T +R++SKP    PQLTIFYAGS         E  Q + LL  + P +  V+  K   
Sbjct: 181 APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQK 240

Query: 241 AGLGSCSKIELPAAPKRM---------QTPASHSNYSE---PPKDARSIA------PIAT 300
               S    + P  P            +T +S SN      P K   S+A        A 
Sbjct: 241 LVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAF 277

[Close]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match: Q6ES51 (Protein TIFY 6b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY6B PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-06
Identity = 97/372 (26.08%), Postives = 140/372 (37.63%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSG---------MQWAFSNKVSALPQLLSFK--- 60
           MERDFLG   K++      +    S   G         M W+F+++ +    L+SF+   
Sbjct: 1   MERDFLGAIGKDEEQRRHAEERKESDYFGAGGGAAAAAMDWSFASRAA----LMSFRSSS 60

Query: 61  ----AAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNG 120
               AA  E+ R++      + D + +    +    QK+   +     QYA A       
Sbjct: 61  SAAAAAAREETRELAFPHFSALDGAKMQQASHVLARQKSFGAESHGIPQYAAAAAVHGAH 120

Query: 121 EAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPI 180
                H     ++ P S+    NN        P+F+ Q   +    VG+     F   P 
Sbjct: 121 RGQPPHVLNGARVIPASSPFNPNN--------PMFRVQSSPNLPNAVGAGGG-AFKQPPF 180

Query: 181 ATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPN----ENFQGMPLLGL-- 240
           A   +V    S +G    R+   P     QLTIFYAGS +  N    E  Q +  L    
Sbjct: 181 AMGNAV--AGSTVGVYGTRD--MPKAKAAQLTIFYAGSVNVFNNVSPEKAQELMFLASRG 240

Query: 241 ---SSPPSVAHSKSPNAGLGSCSKIEL----PAAPKRMQTP------------------- 300
              S+P +VA  + P A +   +K+ +    P  P  +Q P                   
Sbjct: 241 SLPSAPTTVA--RMPEAHVFPPAKVTVPEVSPTKPMMLQKPQLVSSPVPAISKPISVVSQ 300

[Close]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match: A2YVF1 (Protein TIFY 6a OS=Oryza sativa subsp. indica OX=39946 GN=TIFY6A PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.5e-05
Identity = 109/392 (27.81%), Postives = 145/392 (36.99%), Query Frame = 0 

Query: 1   MERDFLG-LNSKNDAMASREDFSD-----SSKNSGMQWAF-SNKVSALPQ-LLSFK---- 60
           MERDFLG +  K +A    E+ SD        ++ MQW F + KV A     +SF+    
Sbjct: 1   MERDFLGAIGRKEEAAGKPEEHSDYRGGGGGASAAMQWQFPATKVGAASSAFMSFRSSAA 60

Query: 61  AAQDEKQRKIVVDPLVSSDLSNLTHRPY------SSVIQKNVVLDKKAGNQYAMAVYPFQ 120
           AA++E  ++  V    S        RP        +   K          QYA A    Q
Sbjct: 61  AAREEDPKEAAVFDRFSLSGFRPPPRPSPGDAFDGAAAMKQRQFGFNGRQQYAAAA---Q 120

Query: 121 NGEAISVHRSQDVKMFPI-------SNQTKTNNAVPVAFNVPV--------------FQS 180
           +G     HR Q V  + +       S      + VP     P+              +++
Sbjct: 121 HG-----HREQGVDSYGVAAPHHFPSPSPSPRHPVPFGHANPMLRVHSLPNVAGGSPYRN 180

Query: 181 QLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAG 240
           Q  S G +V GS V + +GG                     R+   P     Q+TIFY G
Sbjct: 181 QSFSVGNSVAGSTVGV-YGGP--------------------RDLQNP--KVTQMTIFYDG 240

Query: 241 SA----SFPNENFQGMPLL----GLSSPPSVAH-SKSPNAGLGSCSKIE-LPAAPKRMQT 300
                 + P E  Q + LL     + SPPS A  S SP +     +  E LPA    +Q 
Sbjct: 241 LVNVFDNIPVEKAQELMLLASRASIPSPPSAARKSDSPISAAAKLTVPEALPARQIVVQK 300

[Close]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match: Q9C5K8 (Protein TIFY 3B OS=Arabidopsis thaliana OX=3702 GN=TIFY3B PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 0 

Query: 160 GGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLS 219
           G   I  + SV  + + + STE++ A +P     QLTIF+ GS +     F G+P   + 
Sbjct: 24  GAAEIGGTGSVEKSINEVRSTEIQTA-EPTVPPNQLTIFFGGSVTV----FDGLPSEKVQ 83

Query: 220 SPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAA 279
               +A          S S +  PA   R  + +S SN + P      I PI+     A 
Sbjct: 84  EILRIAAKAMETKNSTSISPVSSPAL-NRAPSFSSTSNVASPAAQPFPIQPISFCRSTAD 143

Query: 280 VPQARKASLTRFLEKRKERL 300
           +P AR+ SL RFLEKR++RL
Sbjct: 144 LPIARRHSLQRFLEKRRDRL 157

[Close]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match: A0A6J1GTJ5 (protein TIFY 6B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457302 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.4e-151
Identity = 296/338 (87.57%), Postives = 298/338 (88.17%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match: A0A6J1K333 (protein TIFY 6B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490220 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.5e-149
Identity = 293/338 (86.69%), Postives = 297/338 (87.87%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGM+WAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMKWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNV+LQ FGGVPIATSVSVP TSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVSLQPFGGVPIATSVSVPLTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNIHPTGQM 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGL SPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLPSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match: A0A6J1GVU8 (protein TIFY 6B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457302 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.2e-149
Identity = 295/338 (87.28%), Postives = 297/338 (87.87%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQ NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQ-NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match: A0A6J1K1H5 (protein TIFY 6B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490220 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147
Identity = 292/338 (86.39%), Postives = 296/338 (87.57%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGM+WAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMKWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQ NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQ-NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNV+LQ FGGVPIATSVSVP TSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVSLQPFGGVPIATSVSVPLTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNIHPTGQM 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGL SPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLPSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match: A0A6J1C6A9 (protein TIFY 6B OS=Momordica charantia OX=3673 GN=LOC111008823 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 8.0e-92
Identity = 206/346 (59.54%), Postives = 235/346 (67.92%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSKN------SGMQWAFSNKVSALPQLLSFKAAQDEK 60
           MERDFLGLNSKN AM  RE F+D+SKN      SGMQW+FSNKVSA+PQL+SFKA+QDEK
Sbjct: 1   MERDFLGLNSKNVAMPFREQFTDASKNSALMGGSGMQWSFSNKVSAVPQLVSFKASQDEK 60

Query: 61  QRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQD 120
           QRK VVD             PYS+ IQKNV L+KKA  QYAMAVYPFQN +A+SVHRS  
Sbjct: 61  QRKTVVD-------------PYSAAIQKNVALEKKAAKQYAMAVYPFQNSDALSVHRS-- 120

Query: 121 VKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFT 180
                        NA+PV FNVPV QSQ+VSSGQ VVGS+ NLQ FGG+PI TS+SVPF 
Sbjct: 121 -------------NALPVGFNVPVLQSQIVSSGQTVVGSSGNLQPFGGIPIGTSISVPFA 180

Query: 181 SSVIGSTELRNASKPPGSTPQLTIFYAGS------------------------------- 240
           SSV+G+TELRNASKPPG    LTIFYAGS                               
Sbjct: 181 SSVVGTTELRNASKPPGPMAPLTIFYAGSVCVYNDISPEKAQAIMLLAGTGGVSQTRNNM 240

Query: 241 -------ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASH 300
                  ASFP+E+FQG+PLLG S+P SVA SK P+ G+ SCS IELPAA K +QT ASH
Sbjct: 241 LSTGQVKASFPSESFQGLPLLGRSNPLSVAQSKGPDTGVRSCSNIELPAAAKPIQTSASH 300

[Close]
BLAST of Carg06635-RA vs. TAIR 10
Match: AT3G17860.1 (jasmonate-zim-domain protein 3 )

HSP 1 Score: 115.2 bits (287), Expect = 9.9e-26
Identity = 122/348 (35.06%), Postives = 168/348 (48.28%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFSDSSK----NSGMQWAFSNKVSA-LPQLLSFKAAQDEKQ 60
           MERDFLGL SKN  +  +E+ S+SS+    N GM W+FSNKVSA   Q LSF+  Q+++ 
Sbjct: 1   MERDFLGLGSKNSPITVKEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDRH 60

Query: 61  RKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDV 120
           RK           S   H P+S     + V D     + A    P+ +         Q V
Sbjct: 61  RK-----------SGNYHLPHSGSFMPSSVADVYDSTRKA----PYSS--------VQGV 120

Query: 121 KMFPISNQTKTNNAVPVAFNVPVFQS-QLVSSGQAVVGSNVNLQ-FGGVPI-ATSVSV-P 180
           +MFP SNQ +  NA  V+ ++P FQS      G++ + +N N Q   GVPI A  +S+ P
Sbjct: 121 RMFPNSNQHEETNA--VSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILP 180

Query: 181 FTSSVIGSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLG--------LS 240
              S++G+T++R++SKP GS  QLTIFYAGS         E  + + LL         + 
Sbjct: 181 PPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVF 240

Query: 241 SPPS-----VAHSK-------------------SPNAGLGS----CSKIELPAAPKRMQT 300
           SPP      V H++                   SP AG  +     +K            
Sbjct: 241 SPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNN 300

[Close]
BLAST of Carg06635-RA vs. TAIR 10
Match: AT3G17860.2 (jasmonate-zim-domain protein 3 )

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-19
Identity = 109/324 (33.64%), Postives = 151/324 (46.60%), Query Frame = 0 

Query: 21  FSDSSKNSGMQWAFSNKVSA-LPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSV 80
           FS  + N GM W+FSNKVSA   Q LSF+  Q+++ RK           S   H P+S  
Sbjct: 12  FSFVAPNRGMNWSFSNKVSASSSQFLSFRPTQEDRHRK-----------SGNYHLPHSGS 71

Query: 81  IQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVF 140
              + V D     + A    P+ +         Q V+MFP SNQ +  NA  V+ ++P F
Sbjct: 72  FMPSSVADVYDSTRKA----PYSS--------VQGVRMFPNSNQHEETNA--VSMSMPGF 131

Query: 141 QS-QLVSSGQAVVGSNVNLQ-FGGVPI-ATSVSV-PFTSSVIGSTELRNASKPPGSTPQL 200
           QS      G++ + +N N Q   GVPI A  +S+ P   S++G+T++R++SKP GS  QL
Sbjct: 132 QSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQL 191

Query: 201 TIFYAGSA----SFPNENFQGMPLLG--------LSSPPS-----VAHSK---------- 260
           TIFYAGS         E  + + LL         + SPP      V H++          
Sbjct: 192 TIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRASVDSSAMPP 251

Query: 261 ---------SPNAGLGS----CSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTF 300
                    SP AG  +     +K             A+ SN + P   + S   +A T 
Sbjct: 252 SFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNNQANGSNINCPVPVSCSTNVMAPT- 307

[Close]
BLAST of Carg06635-RA vs. TAIR 10
Match: AT3G17860.3 (jasmonate-zim-domain protein 3 )

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-18
Identity = 105/315 (33.33%), Postives = 146/315 (46.35%), Query Frame = 0 

Query: 30  MQWAFSNKVSA-LPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDK 89
           M W+FSNKVSA   Q LSF+  Q+++ RK           S   H P+S     + V D 
Sbjct: 1   MNWSFSNKVSASSSQFLSFRPTQEDRHRK-----------SGNYHLPHSGSFMPSSVADV 60

Query: 90  KAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQS-QLVSSG 149
               + A    P+ +         Q V+MFP SNQ +  NA  V+ ++P FQS      G
Sbjct: 61  YDSTRKA----PYSS--------VQGVRMFPNSNQHEETNA--VSMSMPGFQSHHYAPGG 120

Query: 150 QAVVGSNVNLQ-FGGVPI-ATSVSV-PFTSSVIGSTELRNASKPPGSTPQLTIFYAGSA- 209
           ++ + +N N Q   GVPI A  +S+ P   S++G+T++R++SKP GS  QLTIFYAGS  
Sbjct: 121 RSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVC 180

Query: 210 ---SFPNENFQGMPLLG--------LSSPPS-----VAHSK------------------- 269
                  E  + + LL         + SPP      V H++                   
Sbjct: 181 VYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRASVDSSAMPPSFMPTISYL 240

Query: 270 SPNAGLGS----CSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQAR 300
           SP AG  +     +K             A+ SN + P   + S   +A T    A+P AR
Sbjct: 241 SPEAGSSTNGLGATKATRGLTSTYHNNQANGSNINCPVPVSCSTNVMAPT---VALPLAR 287

[Close]
BLAST of Carg06635-RA vs. TAIR 10
Match: AT1G48500.1 (jasmonate-zim-domain protein 4 )

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-14
Identity = 102/327 (31.19%), Postives = 142/327 (43.43%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFS-DSSKNSG-MQWAFSNKVSALPQLLSFKAAQDEKQRKI 60
           MERDFLGL SK   +  +E+ + DS+ + G M W+FS+KV + PQ LSF  +Q E +   
Sbjct: 1   MERDFLGLGSKLSPITVKEETNEDSAPSRGMMDWSFSSKVGSGPQFLSFGTSQQETRVNT 60

Query: 61  VVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMF 120
           V D L+SS   +   R Y S +Q++                                ++F
Sbjct: 61  VNDHLLSSAAMDQNQRTYFSSLQED--------------------------------RVF 120

Query: 121 PISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVI 180
           P S+Q +    + V+ + P +           + S +N Q  GG PI      P  S   
Sbjct: 121 PGSSQ-QDQTTITVSMSEPNY-----------INSFINHQHLGGSPI----MAPPVSVFP 180

Query: 181 GSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLGLSSPPS--VAHSKSPN 240
             T +R++SKP    PQLTIFYAGS         E  Q + LL  + P +  V+  K   
Sbjct: 181 APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQK 240

Query: 241 AGLGSCSKIELPAAPKRM---------QTPASHSNYSE---PPKDARSIA------PIAT 300
               S    + P  P            +T +S SN      P K   S+A        A 
Sbjct: 241 LVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAF 277

[Close]
BLAST of Carg06635-RA vs. TAIR 10
Match: AT1G48500.2 (jasmonate-zim-domain protein 4 )

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-14
Identity = 102/326 (31.29%), Postives = 141/326 (43.25%), Query Frame = 0 

Query: 1   MERDFLGLNSKNDAMASREDFS-DSSKNSG-MQWAFSNKVSALPQLLSFKAAQDEKQRKI 60
           MERDFLGL SK   +  +E+ + DS+ + G M W+FS+KV + PQ LSF  +Q E +   
Sbjct: 1   MERDFLGLGSKLSPITVKEETNEDSAPSRGMMDWSFSSKVGSGPQFLSFGTSQQETRVNT 60

Query: 61  VVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMF 120
           V D L+SS   +   R Y S +Q++                                ++F
Sbjct: 61  VNDHLLSSAAMDQNQRTYFSSLQED--------------------------------RVF 120

Query: 121 PISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVI 180
           P S+Q +    + V+ + P +           + S +N Q  GG PI      P  S   
Sbjct: 121 PGSSQ-QDQTTITVSMSEPNY-----------INSFINHQHLGGSPI----MAPPVSVFP 180

Query: 181 GSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLGLSSPPS--VAHSKSPN 240
             T +R++SKP    PQLTIFYAGS         E  Q + LL  + P +  V+  K   
Sbjct: 181 APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQK 240

Query: 241 AGLGSCSKIELPAAPKRM---------QTPASHSNYSE---PPKDARSIA------PIAT 299
               S    + P  P            +T +S SN      P K   S+A        A 
Sbjct: 241 LVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAF 276

The following BLAST results are available for this feature:
BLAST of Carg06635-RA vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012156.12.0e-169100.00Protein TIFY 6B [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6572975.13.4e-15388.43Protein TIFY 6B, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022955298.17.1e-15187.57protein TIFY 6B-like isoform X1 [Cucurbita moschata][more]
XP_023542531.11.6e-15087.28protein TIFY 6B-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022994524.15.1e-14986.69protein TIFY 6B-like isoform X1 [Cucurbita maxima][more]
BLAST of Carg06635-RA vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LVI41.4e-2435.06Protein TIFY 6B OS=Arabidopsis thaliana OX=3702 GN=TIFY6B PE=1 SV=1[more]
Q58G472.5e-1331.19Protein TIFY 6A OS=Arabidopsis thaliana OX=3702 GN=TIFY6A PE=1 SV=1[more]
Q6ES512.9e-0626.08Protein TIFY 6b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY6B PE=1 SV=1[more]
A2YVF15.5e-0527.81Protein TIFY 6a OS=Oryza sativa subsp. indica OX=39946 GN=TIFY6A PE=3 SV=1[more]
Q9C5K82.1e-0432.86Protein TIFY 3B OS=Arabidopsis thaliana OX=3702 GN=TIFY3B PE=1 SV=1[more]
BLAST of Carg06635-RA vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GTJ53.4e-15187.57protein TIFY 6B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457302 PE... [more]
A0A6J1K3332.5e-14986.69protein TIFY 6B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490220 PE=3... [more]
A0A6J1GVU83.2e-14987.28protein TIFY 6B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457302 PE... [more]
A0A6J1K1H52.3e-14786.39protein TIFY 6B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490220 PE=3... [more]
A0A6J1C6A98.0e-9259.54protein TIFY 6B OS=Momordica charantia OX=3673 GN=LOC111008823 PE=3 SV=1[more]
BLAST of Carg06635-RA vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G17860.19.9e-2635.06jasmonate-zim-domain protein 3 [more]
AT3G17860.21.4e-1933.64jasmonate-zim-domain protein 3 [more]
AT3G17860.33.4e-1833.33jasmonate-zim-domain protein 3 [more]
AT1G48500.11.7e-1431.19jasmonate-zim-domain protein 4 [more]
AT1G48500.22.3e-1431.29jasmonate-zim-domain protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018467CO/COL/TOC1, conserved sitePFAMPF09425Jas_motifcoord: 281..299
e-value: 4.2E-10
score: 39.3
NoneNo IPR availablePANTHERPTHR33077:SF90PROTEIN TIFY 7coord: 22..202
NoneNo IPR availablePANTHERPTHR33077:SF90PROTEIN TIFY 7coord: 214..301
IPR040390TIFY/JAZ familyPANTHERPTHR33077PROTEIN TIFY 4A-RELATED-RELATEDcoord: 22..202
coord: 214..301

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg06635Carg06635gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06635-RA:7Carg06635-RA:7exon
Carg06635-RA:6Carg06635-RA:6exon
Carg06635-RA:5Carg06635-RA:5exon
Carg06635-RA:4Carg06635-RA:4exon
Carg06635-RA:3Carg06635-RA:3exon
Carg06635-RA:2Carg06635-RA:2exon
Carg06635-RA:1Carg06635-RA:1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06635-RA:three_prime_utrCarg06635-RA:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06635-RA:cdsCarg06635-RA:cds_7CDS
Carg06635-RA:cdsCarg06635-RA:cds_6CDS
Carg06635-RA:cdsCarg06635-RA:cds_5CDS
Carg06635-RA:cdsCarg06635-RA:cds_4CDS
Carg06635-RA:cdsCarg06635-RA:cds_3CDS
Carg06635-RA:cdsCarg06635-RA:cds_2CDS
Carg06635-RA:cdsCarg06635-RA:cdsCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06635-RA:five_prime_utrCarg06635-RA:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg06635-RACarg06635-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031347 regulation of defense response
biological_process GO:2000022 regulation of jasmonic acid mediated signaling pathway
biological_process GO:0009611 response to wounding
cellular_component GO:0005634 nucleus