Carg06047-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg06047-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr04: 21661617 .. 21663938 (-)
Sequence length2322
RNA-Seq ExpressionCarg06047-RA
SyntenyCarg06047-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGGTATTGGGTAATGCCTTATCGAACATGGGGGAGAGCTCATATGTCAGCAAGGGGAAATATTTTGCCGATGGTTCCACCGTTGCGCACGAAGTGGTGCGCCGTCTCCTCCCGGTTTCGATGTTTACAGGTTTCTTCTAATTCAGCTTCTACATGTAACTTTCTACCATTTCTTTTCTCTAGAAGATGGTTGAGTCAAAGTCATAGAGTCCCATCCTCATTTTTGCTTCAAACCAGACCATTTCCTGATTATTCTCCTAAGAAGCCTACAATTAGAGATGCTGAACTTGTCCATAACATCACTGCTACAATTAAGTTGCGACGTTCTGAGCCCCTCCGACGCACTCTAAAGCCTTATGAATCCAGCTTTAGGCATGATCATCTGATTTGGGTACTGATGAACATTAAGAACGACTATAATTTGGTTTTGGCTTTCTTTGATTGGTCACGGATTCGTAGAGATCCTTCTCTGGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGCGTCAAATGATCTTAGAATGGCTCATGAGCTGGTTCGTGATCATTTCTTGAACTCAAGTCTGGGGGTTAGTGTTACAATGGCTCAATTTACCAACCGGCTGATATACACATATAAGTACTGGGGGTCAAATCCCATTGCATTTGACATATTTTTTCAGGTCCTAGTTGAATTTGGTTCTTTTAGTGAAGCAAGAATACTGTTGGACAAATGGTTGAGCTATGGATTAGTTGTCACCGTTGATTCTTGTAATTTTTTTCTTAGTCGCATGGCTAACAATTCTGAAGAAGTAGGGATGGCCATTAAGTTTTTTAGAGAATATGGTATTAGTTGGAATACTACATCTTATAACATCGTTATTTATGCTTTATGTAGATTGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCAGATGGATTATAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACCGTGATTGATGGATATTGTCAGTTGGGAGAATTAAAGAAGGCATTGAAGCTTATAGATGACATGCAAATACAAGGACTGAAACCAAATAGTTATACCTACAATAGCATAATATCACTTCTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTCTCAAAAGATTGTTCCTGATAAGGTAGTCTACACCACTCTCATACATGGTTTCTACAAATCAGGACATGTTCAAACTGCAAATAAACTGTTTGACGAAATGTTGTCTAAGAAGATCGGTCTTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATTTGTTCCATGAAATGATTAGCAGAGGGTTCAAGCCTGATGGAGTTGCTTATACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCGTTTTCTCTTCATAATGAGATGGTTCAAATGGGACTGACTCCAAATGTTGTGACTTACGGTGCCCTGATTGATGGGCTTTGTAAGCGTGGAGAACTGGATACAGCAAATGAGCTTTTGGATGAGATGCACAAAAAGGGCCTTCAACTAAATGTATGCACTTATAACTCGATTATTAACGGTAGTTGCAAAGCTGGAAATATTGCACAAGCAATAGGACTGATGGCAGAGATGGAGGTGGGTGGAATTAATCCTGACACTATCACTTATACCACTATCATTGATGCCTATTGTAAATTAGGAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGCTAGAGGGCTTCAACCTACTGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTATGTTGGGAATGCTTGAAGATGGCGATGTGCTGTTAGGGTGGATGCTAGAGAAGGGCATTGTGCCTAATGCAGTAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAATGCTACGACTGAAATTTACAAGGGGATGCGTAATCAAGGAGTGATCCCTGATGGTAACACCTTCAATATTTTAATAAAAGGGCATTGTAAAGCACGGAATCTGAAGGAGGCGTGGTTTCTATATAAAGAAATGGTTGAGAAAGGATATGTTCCCTCTGTTACTTCATATAATGCACTCATAAAGGGGTTTTACAAGAAGAAGAAAATTTTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGAACATGGGTTGGTCGGTGATAGAGAAATATACAATATCTTTGTTGATATATTCTATGAAGAAGGAAATATGGAGATAACTCTTGATCTCTGTGATGAAGCAATCGAGAAATGTCTACTTGTTGAGAGATAA

mRNA sequence

ATGAATAGGTATTGGGTAATGCCTTATCGAACATGGGGGAGAGCTCATATGTCAGCAAGGGGAAATATTTTGCCGATGGTTCCACCGTTGCGCACGAAGTGGTGCGCCGTCTCCTCCCGGTTTCGATGTTTACAGGTTTCTTCTAATTCAGCTTCTACATGTAACTTTCTACCATTTCTTTTCTCTAGAAGATGGTTGAGTCAAAGTCATAGAGTCCCATCCTCATTTTTGCTTCAAACCAGACCATTTCCTGATTATTCTCCTAAGAAGCCTACAATTAGAGATGCTGAACTTGTCCATAACATCACTGCTACAATTAAGTTGCGACGTTCTGAGCCCCTCCGACGCACTCTAAAGCCTTATGAATCCAGCTTTAGGCATGATCATCTGATTTGGGTACTGATGAACATTAAGAACGACTATAATTTGGTTTTGGCTTTCTTTGATTGGTCACGGATTCGTAGAGATCCTTCTCTGGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGCGTCAAATGATCTTAGAATGGCTCATGAGCTGGTTCGTGATCATTTCTTGAACTCAAGTCTGGGGGTTAGTGTTACAATGGCTCAATTTACCAACCGGCTGATATACACATATAAGTACTGGGGGTCAAATCCCATTGCATTTGACATATTTTTTCAGGTCCTAGTTGAATTTGGTTCTTTTAGTGAAGCAAGAATACTGTTGGACAAATGGTTGAGCTATGGATTAGTTGTCACCGTTGATTCTTGTAATTTTTTTCTTAGTCGCATGGCTAACAATTCTGAAGAAGTAGGGATGGCCATTAAGTTTTTTAGAGAATATGGTATTAGTTGGAATACTACATCTTATAACATCGTTATTTATGCTTTATGTAGATTGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCAGATGGATTATAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACCGTGATTGATGGATATTGTCAGTTGGGAGAATTAAAGAAGGCATTGAAGCTTATAGATGACATGCAAATACAAGGACTGAAACCAAATAGTTATACCTACAATAGCATAATATCACTTCTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTCTCAAAAGATTGTTCCTGATAAGGTAGTCTACACCACTCTCATACATGGTTTCTACAAATCAGGACATGTTCAAACTGCAAATAAACTGTTTGACGAAATGTTGTCTAAGAAGATCGGTCTTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATTTGTTCCATGAAATGATTAGCAGAGGGTTCAAGCCTGATGGAGTTGCTTATACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCGTTTTCTCTTCATAATGAGATGGTTCAAATGGGACTGACTCCAAATGTTGTGACTTACGGTGCCCTGATTGATGGGCTTTGTAAGCGTGGAGAACTGGATACAGCAAATGAGCTTTTGGATGAGATGCACAAAAAGGGCCTTCAACTAAATGTATGCACTTATAACTCGATTATTAACGGTAGTTGCAAAGCTGGAAATATTGCACAAGCAATAGGACTGATGGCAGAGATGGAGGTGGGTGGAATTAATCCTGACACTATCACTTATACCACTATCATTGATGCCTATTGTAAATTAGGAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGCTAGAGGGCTTCAACCTACTGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTATGTTGGGAATGCTTGAAGATGGCGATGTGCTGTTAGGGTGGATGCTAGAGAAGGGCATTGTGCCTAATGCAGTAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAATGCTACGACTGAAATTTACAAGGGGATGCGTAATCAAGGAGTGATCCCTGATGGTAACACCTTCAATATTTTAATAAAAGGGCATTGTAAAGCACGGAATCTGAAGGAGGCGTGGTTTCTATATAAAGAAATGGTTGAGAAAGGATATGTTCCCTCTGTTACTTCATATAATGCACTCATAAAGGGGTTTTACAAGAAGAAGAAAATTTTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGAACATGGGTTGGTCGGTGATAGAGAAATATACAATATCTTTGTTGATATATTCTATGAAGAAGGAAATATGGAGATAACTCTTGATCTCTGTGATGAAGCAATCGAGAAATGTCTACTTGTTGAGAGATAA

Coding sequence (CDS)

ATGAATAGGTATTGGGTAATGCCTTATCGAACATGGGGGAGAGCTCATATGTCAGCAAGGGGAAATATTTTGCCGATGGTTCCACCGTTGCGCACGAAGTGGTGCGCCGTCTCCTCCCGGTTTCGATGTTTACAGGTTTCTTCTAATTCAGCTTCTACATGTAACTTTCTACCATTTCTTTTCTCTAGAAGATGGTTGAGTCAAAGTCATAGAGTCCCATCCTCATTTTTGCTTCAAACCAGACCATTTCCTGATTATTCTCCTAAGAAGCCTACAATTAGAGATGCTGAACTTGTCCATAACATCACTGCTACAATTAAGTTGCGACGTTCTGAGCCCCTCCGACGCACTCTAAAGCCTTATGAATCCAGCTTTAGGCATGATCATCTGATTTGGGTACTGATGAACATTAAGAACGACTATAATTTGGTTTTGGCTTTCTTTGATTGGTCACGGATTCGTAGAGATCCTTCTCTGGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGCGTCAAATGATCTTAGAATGGCTCATGAGCTGGTTCGTGATCATTTCTTGAACTCAAGTCTGGGGGTTAGTGTTACAATGGCTCAATTTACCAACCGGCTGATATACACATATAAGTACTGGGGGTCAAATCCCATTGCATTTGACATATTTTTTCAGGTCCTAGTTGAATTTGGTTCTTTTAGTGAAGCAAGAATACTGTTGGACAAATGGTTGAGCTATGGATTAGTTGTCACCGTTGATTCTTGTAATTTTTTTCTTAGTCGCATGGCTAACAATTCTGAAGAAGTAGGGATGGCCATTAAGTTTTTTAGAGAATATGGTATTAGTTGGAATACTACATCTTATAACATCGTTATTTATGCTTTATGTAGATTGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCAGATGGATTATAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACCGTGATTGATGGATATTGTCAGTTGGGAGAATTAAAGAAGGCATTGAAGCTTATAGATGACATGCAAATACAAGGACTGAAACCAAATAGTTATACCTACAATAGCATAATATCACTTCTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTCTCAAAAGATTGTTCCTGATAAGGTAGTCTACACCACTCTCATACATGGTTTCTACAAATCAGGACATGTTCAAACTGCAAATAAACTGTTTGACGAAATGTTGTCTAAGAAGATCGGTCTTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATTTGTTCCATGAAATGATTAGCAGAGGGTTCAAGCCTGATGGAGTTGCTTATACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCGTTTTCTCTTCATAATGAGATGGTTCAAATGGGACTGACTCCAAATGTTGTGACTTACGGTGCCCTGATTGATGGGCTTTGTAAGCGTGGAGAACTGGATACAGCAAATGAGCTTTTGGATGAGATGCACAAAAAGGGCCTTCAACTAAATGTATGCACTTATAACTCGATTATTAACGGTAGTTGCAAAGCTGGAAATATTGCACAAGCAATAGGACTGATGGCAGAGATGGAGGTGGGTGGAATTAATCCTGACACTATCACTTATACCACTATCATTGATGCCTATTGTAAATTAGGAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGCTAGAGGGCTTCAACCTACTGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTATGTTGGGAATGCTTGAAGATGGCGATGTGCTGTTAGGGTGGATGCTAGAGAAGGGCATTGTGCCTAATGCAGTAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAATGCTACGACTGAAATTTACAAGGGGATGCGTAATCAAGGAGTGATCCCTGATGGTAACACCTTCAATATTTTAATAAAAGGGCATTGTAAAGCACGGAATCTGAAGGAGGCGTGGTTTCTATATAAAGAAATGGTTGAGAAAGGATATGTTCCCTCTGTTACTTCATATAATGCACTCATAAAGGGGTTTTACAAGAAGAAGAAAATTTTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGAACATGGGTTGGTCGGTGATAGAGAAATATACAATATCTTTGTTGATATATTCTATGAAGAAGGAAATATGGAGATAACTCTTGATCTCTGTGATGAAGCAATCGAGAAATGTCTACTTGTTGAGAGATAA

Protein sequence

MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Homology
BLAST of Carg06047-RA vs. NCBI nr
Match: KAG7033367.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1578.5 bits (4086), Expect = 0.0e+00
Identity = 773/773 (100.00%), Postives = 773/773 (100.00%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
           LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. NCBI nr
Match: XP_022922762.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922769.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922778.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1568.1 bits (4059), Expect = 0.0e+00
Identity = 767/773 (99.22%), Postives = 771/773 (99.74%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61  FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKN+YNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNEYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNS+LGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
           LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. NCBI nr
Match: XP_023544192.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 760/773 (98.32%), Postives = 767/773 (99.22%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRR EPLRRTLKP
Sbjct: 61  FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRYEPLRRTLKP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNS+LGVSVTMAQFTNRL+YTYKYWG NPIAFDIFFQ LVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLMYTYKYWGLNPIAFDIFFQALVEFGSFSEARILLDK 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
           LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIG+AHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGRAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMN TTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNTTTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. NCBI nr
Match: XP_022989951.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima] >XP_022989952.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1536.5 bits (3977), Expect = 0.0e+00
Identity = 752/773 (97.28%), Postives = 762/773 (98.58%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRY VMPYRTWGRAHMSARGNILPMVPPL TKWCAVSSR RCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYCVMPYRTWGRAHMSARGNILPMVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FS RWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTL P
Sbjct: 61  FSIRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKNDYNLVLAFFDW+RIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNS+LGVSVTMAQFT+RLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEAR LLD+
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTDRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDR 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALC+LGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPD VSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDAVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKI+PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKI 
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKILPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIS 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
            DYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 PDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR HGLVGDREIYNIFVDIFYEEGN+EITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNVEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. NCBI nr
Match: KAG6602680.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 704/709 (99.29%), Postives = 707/709 (99.72%), Query Frame = 0

Query: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
           MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD
Sbjct: 1   MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 60

Query: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
           YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYES FRHDHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESRFRHDHLIWVLMNIKNDYNLVL 120

Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
           AFFDWSRIRRDPSLEARCIVIHI+VASNDLRMAHELVRDHFLNS+LGVSVTMAQFTNRLI
Sbjct: 121 AFFDWSRIRRDPSLEARCIVIHISVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLI 180

Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
           YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE
Sbjct: 181 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 240

Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
           EVGMAIKFFREYGISWNTTSYNIVI ALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI
Sbjct: 241 EVGMAIKFFREYGISWNTTSYNIVICALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 300

Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
           DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV
Sbjct: 301 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 360

Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
           PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL
Sbjct: 361 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 420

Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
           FHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK
Sbjct: 421 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 480

Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
           RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT
Sbjct: 481 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 540

Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
           YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML
Sbjct: 541 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 600

Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
           EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK
Sbjct: 601 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 660

Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL 735
           EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL
Sbjct: 661 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL 709

BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 1.1e-245
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0

Query: 68  QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
           QS  +  S L  TRPFPDYSPKK ++RD E VH IT  IKLRR+EPLRR+LKPYE  F+ 
Sbjct: 28  QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87

Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
           DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A  L+   + 
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147

Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
              L V+ +  QF + L+YTYK WGS+P  FD+FFQVLV+FG   EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207

Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
           ++VDSCN +L+R++ +  +   AI  FRE+   G+ WN  SYNIVI+ +C+LG+IKEAH 
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
           LL+ M+ +  TPDV+SYSTV++GYC+ GEL K  KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327

Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
           +I K  EAE+   EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I  D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387

Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
           TYT +I GF Q G ++E   LFHEM  +G +PD V +T LI+ YCKAG M  AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
           +Q G +PNVVTY  LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507

Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
            +A+ L+ E E  G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
           MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
            PDG T+  L+KGHCKARN+KEAWFL++EM  KG+  SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           +F++MR  GL  D+EI++ F D  Y+    +  +D  DE IE  L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736

BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-92
Identity = 205/684 (29.97%), Postives = 344/684 (50.29%), Query Frame = 0

Query: 133 VLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLG 192
           +L+  +ND  L+L F +W+   +  +L  +CI +HI       + A  L  D     +L 
Sbjct: 54  LLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAED-VAAKTLD 113

Query: 193 VSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDS 252
                  F + L  TY    S    FD+  +         +A  ++    ++G +  V S
Sbjct: 114 DEYASLVFKS-LQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 173

Query: 253 CNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHRLLMQM 312
            N  L     +   +  A   F+E     +S N  +YNI+I   C  G I  A  L  +M
Sbjct: 174 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 233

Query: 313 DYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKP 372
           + +   P+VV+Y+T+IDGYC+L ++    KL+  M ++GL+PN  +YN +I+ LC+ G+ 
Sbjct: 234 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 293

Query: 373 FEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTL 432
            E   VL EM  +    D+V Y TLI G+ K G+   A  +  EML   +    ITYT+L
Sbjct: 294 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 353

Query: 433 IQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGL 492
           I    ++G +        +M  RG  P+   YT L+D + + G M +A+ +  EM   G 
Sbjct: 354 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 413

Query: 493 TPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIG 552
           +P+VVTY ALI+G C  G+++ A  +L++M +KGL  +V +Y+++++G C++ ++ +A+ 
Sbjct: 414 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 473

Query: 553 LMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFC 612
           +  EM   GI PDTITY+++I  +C+     +A  L +EML  GL P   T+  L+N +C
Sbjct: 474 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 533

Query: 613 MLGMLEDGDVLLGWMLEKGIVPNAVTYN-------------------------------- 672
           M G LE    L   M+EKG++P+ VTY+                                
Sbjct: 534 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 593

Query: 673 ------------------TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHC 732
                             +L+K +C++  M    ++++ M  +   PDG  +NI+I GHC
Sbjct: 594 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 653

Query: 733 KARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDRE 764
           +A ++++A+ LYKEMV+ G++    +  AL+K  +K+ K+ E   +   +     + + E
Sbjct: 654 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 713

BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.5e-91
Identity = 197/647 (30.45%), Postives = 339/647 (52.40%), Query Frame = 0

Query: 130 LIWVLMNIKNDYNLVLAFFDWSRIR----RDPSLEARCIVIHIAVASNDLRMAHELVRDH 189
           ++ VL   +ND  L   F D         +  SL     +IHI V S  L  A   +   
Sbjct: 81  VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA-MIHILVRSGRLSDAQSCLLRM 140

Query: 190 FLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYG 249
              S     V+  +  N L  T+   GSN   FD+  +  V+     EA        S G
Sbjct: 141 IRRS----GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 200

Query: 250 LVVTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEA 309
             V++D+CN  +  +      V +A   ++E    G+  N  + NI++ ALC+ GK+++ 
Sbjct: 201 FTVSIDACNALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 260

Query: 310 HRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISL 369
              L Q+  +   PD+V+Y+T+I  Y   G +++A +L++ M  +G  P  YTYN++I+ 
Sbjct: 261 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 320

Query: 370 LCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLD 429
           LCK GK   A++V  EM+   + PD   Y +L+    K G V    K+F +M S+ +  D
Sbjct: 321 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 380

Query: 430 YITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHN 489
            + +++++  F +SG + +    F+ +   G  PD V YT+LI  YC+ G +  A +L N
Sbjct: 381 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 440

Query: 490 EMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAG 549
           EM+Q G   +VVTY  ++ GLCKR  L  A++L +EM ++ L  +  T   +I+G CK G
Sbjct: 441 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 500

Query: 550 NIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFN 609
           N+  A+ L  +M+   I  D +TY T++D + K+GDI  A ++  +M+++ + PT ++++
Sbjct: 501 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 560

Query: 610 VLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQ 669
           +L+N  C  G L +   +   M+ K I P  +  N+++K YC   N +      + M ++
Sbjct: 561 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 620

Query: 670 GVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK--GYVPSVTSYNALIKGFYKKKKIL 729
           G +PD  ++N LI G  +  N+ +A+ L K+M E+  G VP V +YN+++ GF ++ ++ 
Sbjct: 621 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 680

Query: 730 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEK 768
           EA  +  +M E G+  DR  Y   ++ F  + N+     + DE +++
Sbjct: 681 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721

BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.2e-83
Identity = 165/483 (34.16%), Postives = 275/483 (56.94%), Query Frame = 0

Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
           G   +T +++ +I  LC  G++ EA  L+ +M      P +++ + +++G C  G++  A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
           + LID M   G +PN  TY  ++ ++CK G+   A ++LR+M  +KI  D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
             K G +  A  LF+EM  K    D I YTTLI+GF  +G+  +   L  +MI R   PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
            VA++ LID + K G++ +A  LH EM+Q G++P+ VTY +LIDG CK  +LD AN +LD
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
            M  KG   N+ T+N +ING CKA  I   + L  +M + G+  DT+TY T+I  +C+LG
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
            +  A +L QEM++R ++P +V++ +L++G C  G  E    +   + +  +  +   YN
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496

Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
            ++   C  + ++   +++  +  +GV PD  T+NI+I G CK  +L EA  L+++M E 
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556

Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
           G+ P+  +YN LI+    +    ++ +L EE++  G   D     + VD+  +    +  
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616

Query: 758 LDL 761
           LD+
Sbjct: 617 LDM 619

BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.8e-81
Identity = 160/483 (33.13%), Postives = 270/483 (55.90%), Query Frame = 0

Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
           G   NT +++ +I  LC  G++ EA  L+ +M      PD+++ +T+++G C  G+  +A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212

Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
           + LID M   G +PN+ TY  +++++CK G+   A ++LR+M  + I  D V Y+ +I G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272

Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
             K G +  A  LF+EM  K I  + ITY  LI GF  +G+  +   L  +MI R   P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332

Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
            V +++LID + K G++ +A  LH EM+  G+ P+ +TY +LIDG CK   LD AN+++D
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392

Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
            M  KG   N+ T+N +ING CKA  I   + L  +M + G+  DT+TY T+I  +C+LG
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452

Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
            +  A +L QEM++R + P +VT+ +L++G C  G  E    +   + +  +  +   YN
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512

Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
            ++   C  + ++   +++  +  +GV P   T+NI+I G CK   L EA  L+++M E 
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572

Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
           G+ P   +YN LI+         ++ +L EE++  G   D     + +D+  +    +  
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632

Query: 758 LDL 761
           LD+
Sbjct: 633 LDM 635

BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match: A0A6J1E482 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430658 PE=4 SV=1)

HSP 1 Score: 1568.1 bits (4059), Expect = 0.0e+00
Identity = 767/773 (99.22%), Postives = 771/773 (99.74%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61  FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKN+YNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNEYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNS+LGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
           LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match: A0A6J1JLL1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486986 PE=4 SV=1)

HSP 1 Score: 1536.5 bits (3977), Expect = 0.0e+00
Identity = 752/773 (97.28%), Postives = 762/773 (98.58%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MNRY VMPYRTWGRAHMSARGNILPMVPPL TKWCAVSSR RCLQVSSNSASTCNFLPFL
Sbjct: 1   MNRYCVMPYRTWGRAHMSARGNILPMVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FS RWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTL P
Sbjct: 61  FSIRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           YESSFRHDHLIWVLMNIKNDYNLVLAFFDW+RIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRDHFLNS+LGVSVTMAQFT+RLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEAR LLD+
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTDRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDR 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
           WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALC+LGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLLMQMDYRSSTPD VSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDAVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
           SLLCKIGKPFEAEKVLREMMSQKI+PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKI 
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKILPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIS 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
            DYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 PDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR HGLVGDREIYNIFVDIFYEEGN+EITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNVEITLDLCDEAIEKCLLVER 773

BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match: A0A0A0LXZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1)

HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 629/748 (84.09%), Postives = 675/748 (90.24%), Query Frame = 0

Query: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
           M+ PL  K C V  RF CLQVSSNSAS CNFLPF  SRRWL+QS RVPSSFLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFSCLQVSSNSASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPD 60

Query: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
           YSPKKPTIRD EL+H+ITA IKLRRSEPL R LK +ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
           AFFDW+R+RR+PSLEARCI+IHIAV SNDLR+AHELV D+FLNS L + V M QFT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLI 180

Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
           YTYKYWG NPIAFDIFFQVLVE G  SEAR LLDK LSYGLVVTVDSCN FLSR+ANNSE
Sbjct: 181 YTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
            + MAIK F EYGISWNTTSYNI+IY+LCRLGK+KEAHRLLMQMD+RSSTPDVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
           DGYC LGELKKALKL+DDMQI+GLKPN YTYNSII LLCKIGK FEAEKVLREMMSQKI+
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
           PD VVYTTLIHGF+K GHV+TANK FDEMLSKKI  DYITYTTLIQGFGQ GKVIEPQNL
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
           FHEMISRG KPD V YT LIDVYCKAGEM+ AFSLHNEMVQMG+TPN+VTYGALIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
            GELDTANELLDEM KKGLQLNVC YNS++NG CKAGNI QAI LM EMEV GI+PD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
           YTT+IDAYC+LGDI KAHKLLQEML RGLQPTVVTFNVLMNGFCMLGMLEDGD LLGWML
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
           EKGIVP+A+TYNTLMKQ+CIRN+MN TT+IYK MRNQGV PD NT+NILIKGHCKARNLK
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFV 745
           EAWFLYKEM+EKGYVP+VTSYNALIK FYKKKKILEARELFEEMR HGLV D EIYN FV
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720

Query: 746 DIFYEEGNMEITLDLCDEAIEKCLLVER 774
           D+ YEEG++EITL+LCDEAIEKCLL ER
Sbjct: 721 DMCYEEGDVEITLNLCDEAIEKCLLNER 748

BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match: A0A5D3BEB0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00390 PE=4 SV=1)

HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 625/748 (83.56%), Postives = 677/748 (90.51%), Query Frame = 0

Query: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
           M+ PL  K C V  RF CLQVSSNSAS CNFLPF FSRRWL+QS RVPS FLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFCCLQVSSNSASRCNFLPFSFSRRWLTQSQRVPSPFLLQTRPFPD 60

Query: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
           YSPKKPTIRD EL+H+ITA IKLRRSEPL R LKP+ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
           AFFDW+R+RR+PSLEARCI++HIAV SNDLR+A ELV D+FLNS L + VTM +FT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIVHIAVVSNDLRLARELVHDYFLNSKLEIGVTMTKFTHRLI 180

Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
           YTYKYWGSNPIAFDI FQVLVE G  SEAR LLDK LSYGLVVTVDSCN FLSR+ANNSE
Sbjct: 181 YTYKYWGSNPIAFDILFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
            + MAIK F EYGISWNTTSYNI+IY+LCRLGK+KEAHRLLMQMD+RSSTPDVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
           DGYC LGELKKALKLIDDMQI+GLKPN YTYNSII LLCKIGK FEAEKVLREMMSQKI+
Sbjct: 301 DGYCHLGELKKALKLIDDMQIKGLKPNRYTYNSIILLLCKIGKLFEAEKVLREMMSQKII 360

Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
           PD VVYTTLIHGF+K GHVQ ANK FDEMLSKKI  DYITYTTLIQGFGQ GKVIEPQN+
Sbjct: 361 PDNVVYTTLIHGFFKLGHVQAANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNI 420

Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
           FHEMISRG KPD V YT LIDVYCKAGEMM AFSLHNEMVQMG+TPN+VTYGALIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMMNAFSLHNEMVQMGVTPNIVTYGALIDGLCK 480

Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
            GELDTANELLDEM KKGLQLNVCTYNS++NG CKAGNIAQAI LM EME+ GI+PD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCTYNSMVNGICKAGNIAQAIKLMKEMELAGIDPDAIT 540

Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
           YTT+IDAYC+LGDIG AHKLLQEML RGLQPTVVTFNVLMNGFCMLGMLEDGD LLGWML
Sbjct: 541 YTTVIDAYCRLGDIGNAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
           EKGIVP+A+TYNTLMKQ+CIRN+MN TT+IY+ MRNQGV+PD NT+NILIKGHCKARNL+
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYQRMRNQGVMPDSNTYNILIKGHCKARNLR 660

Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFV 745
           EAWFLYKEM+EKGYVP+VTSYNALIK  YK+KKILEARELFEEMR HGLV   EIYN FV
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRLYKRKKILEARELFEEMRGHGLVAAGEIYNFFV 720

Query: 746 DIFYEEGNMEITLDLCDEAIEKCLLVER 774
           D++YEEGN+EITL+LCDEA+EKCLL ER
Sbjct: 721 DMYYEEGNVEITLNLCDEAVEKCLLNER 748

BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match: A0A6J1BYF4 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006602 PE=4 SV=1)

HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 637/773 (82.41%), Postives = 688/773 (89.00%), Query Frame = 0

Query: 1   MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
           MN YW +P RTW R        + PMV P  TK C VS    CLQVSSNSAST +FLPFL
Sbjct: 1   MNSYWQLPCRTWER--------VSPMVLPSHTKRCVVSFWVHCLQVSSNSASTFSFLPFL 60

Query: 61  FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
           FSRRWLS+  RVPSS LLQTRPFPDYSPKKPTIRD ELV  ITA IKLRRSEPL+R LKP
Sbjct: 61  FSRRWLSR--RVPSSCLLQTRPFPDYSPKKPTIRDTELVSYITAAIKLRRSEPLKRILKP 120

Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
           +ES+FRH HLIWVLMNI+NDYNLVLAFFDW+R+RRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 HESNFRHHHLIWVLMNIRNDYNLVLAFFDWARVRRDPSLEARCIVIHIAVASNDLRMAHE 180

Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
           LVRD+F++S L V VT+AQFT+RLIYTYK WGSNPI FDIFF VLVE G FSEAR LLDK
Sbjct: 181 LVRDYFISSKLDVGVTVAQFTDRLIYTYKDWGSNPITFDIFFLVLVEIGLFSEARKLLDK 240

Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
            LSYGLV+TVDSCNFFLSR+A NSE + MAI+ F EYGI WNTTSYNI+IY+LC+LGKIK
Sbjct: 241 LLSYGLVITVDSCNFFLSRIARNSEGLEMAIEVFSEYGICWNTTSYNIIIYSLCQLGKIK 300

Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
           EAHRLL+QM++RSST DVVSYSTVI GYC LGELKKALKLIDDMQI GLKPN YTYNSII
Sbjct: 301 EAHRLLLQMEFRSSTSDVVSYSTVISGYCHLGELKKALKLIDDMQINGLKPNRYTYNSII 360

Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
            LLCKIGKPFEAEKVL EM+S+KI+PD VVYTTLIHGFYK GHVQTANKLFDEML KKI 
Sbjct: 361 LLLCKIGKPFEAEKVLGEMISRKIIPDNVVYTTLIHGFYKLGHVQTANKLFDEMLLKKIS 420

Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
            DY+TYTTLIQGFGQSGKVIEP+NLFHEMISRG KPD V YT LI+VYCKAGEMMKAFSL
Sbjct: 421 PDYVTYTTLIQGFGQSGKVIEPENLFHEMISRGLKPDEVTYTTLINVYCKAGEMMKAFSL 480

Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
           HNEM+QMGLTPN+VTYGALIDGLCK GELDTANELLDEM KKGLQ+NVCTYNSIIN  CK
Sbjct: 481 HNEMIQMGLTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQINVCTYNSIINCICK 540

Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
           AGNIAQ I LM EMEV GI PDTITYTTIIDAYC+ GDI KAHKLLQEML RGL PTVVT
Sbjct: 541 AGNIAQGIRLMEEMEVAGIYPDTITYTTIIDAYCRSGDIVKAHKLLQEMLDRGLPPTVVT 600

Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
           FNVLMNGFCMLGMLEDG++LLGWMLEKGI+PNA TYN LMKQYCI++NM+AT++IYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGNMLLGWMLEKGIMPNATTYNNLMKQYCIKDNMHATSKIYKGMR 660

Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
           +QGV+PD NT+NILIKGHCKARN+KEAWFL+KEMVEKGY+PSVTSYNALIKGFYKKKKIL
Sbjct: 661 DQGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYIPSVTSYNALIKGFYKKKKIL 720

Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           EARELFEEMR  GLV DREIYNIFVDI+YEEGN EITL+LCDEAIEKCLL ER
Sbjct: 721 EARELFEEMRGQGLVSDREIYNIFVDIYYEEGNTEITLNLCDEAIEKCLLGER 763

BLAST of Carg06047-RA vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 850.9 bits (2197), Expect = 8.0e-247
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0

Query: 68  QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
           QS  +  S L  TRPFPDYSPKK ++RD E VH IT  IKLRR+EPLRR+LKPYE  F+ 
Sbjct: 28  QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87

Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
           DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A  L+   + 
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147

Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
              L V+ +  QF + L+YTYK WGS+P  FD+FFQVLV+FG   EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207

Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
           ++VDSCN +L+R++ +  +   AI  FRE+   G+ WN  SYNIVI+ +C+LG+IKEAH 
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
           LL+ M+ +  TPDV+SYSTV++GYC+ GEL K  KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327

Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
           +I K  EAE+   EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I  D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387

Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
           TYT +I GF Q G ++E   LFHEM  +G +PD V +T LI+ YCKAG M  AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
           +Q G +PNVVTY  LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507

Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
            +A+ L+ E E  G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
           MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
            PDG T+  L+KGHCKARN+KEAWFL++EM  KG+  SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           +F++MR  GL  D+EI++ F D  Y+    +  +D  DE IE  L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736

BLAST of Carg06047-RA vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 850.9 bits (2197), Expect = 8.0e-247
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0

Query: 68  QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
           QS  +  S L  TRPFPDYSPKK ++RD E VH IT  IKLRR+EPLRR+LKPYE  F+ 
Sbjct: 28  QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87

Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
           DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A  L+   + 
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147

Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
              L V+ +  QF + L+YTYK WGS+P  FD+FFQVLV+FG   EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207

Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
           ++VDSCN +L+R++ +  +   AI  FRE+   G+ WN  SYNIVI+ +C+LG+IKEAH 
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
           LL+ M+ +  TPDV+SYSTV++GYC+ GEL K  KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327

Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
           +I K  EAE+   EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I  D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387

Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
           TYT +I GF Q G ++E   LFHEM  +G +PD V +T LI+ YCKAG M  AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
           +Q G +PNVVTY  LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507

Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
            +A+ L+ E E  G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
           MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
            PDG T+  L+KGHCKARN+KEAWFL++EM  KG+  SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
           +F++MR  GL  D+EI++ F D  Y+    +  +D  DE IE  L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736

BLAST of Carg06047-RA vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 1.6e-93
Identity = 205/684 (29.97%), Postives = 344/684 (50.29%), Query Frame = 0

Query: 133 VLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLG 192
           +L+  +ND  L+L F +W+   +  +L  +CI +HI       + A  L  D     +L 
Sbjct: 54  LLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAED-VAAKTLD 113

Query: 193 VSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDS 252
                  F + L  TY    S    FD+  +         +A  ++    ++G +  V S
Sbjct: 114 DEYASLVFKS-LQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 173

Query: 253 CNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHRLLMQM 312
            N  L     +   +  A   F+E     +S N  +YNI+I   C  G I  A  L  +M
Sbjct: 174 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 233

Query: 313 DYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKP 372
           + +   P+VV+Y+T+IDGYC+L ++    KL+  M ++GL+PN  +YN +I+ LC+ G+ 
Sbjct: 234 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 293

Query: 373 FEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTL 432
            E   VL EM  +    D+V Y TLI G+ K G+   A  +  EML   +    ITYT+L
Sbjct: 294 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 353

Query: 433 IQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGL 492
           I    ++G +        +M  RG  P+   YT L+D + + G M +A+ +  EM   G 
Sbjct: 354 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 413

Query: 493 TPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIG 552
           +P+VVTY ALI+G C  G+++ A  +L++M +KGL  +V +Y+++++G C++ ++ +A+ 
Sbjct: 414 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 473

Query: 553 LMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFC 612
           +  EM   GI PDTITY+++I  +C+     +A  L +EML  GL P   T+  L+N +C
Sbjct: 474 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 533

Query: 613 MLGMLEDGDVLLGWMLEKGIVPNAVTYN-------------------------------- 672
           M G LE    L   M+EKG++P+ VTY+                                
Sbjct: 534 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 593

Query: 673 ------------------TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHC 732
                             +L+K +C++  M    ++++ M  +   PDG  +NI+I GHC
Sbjct: 594 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 653

Query: 733 KARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDRE 764
           +A ++++A+ LYKEMV+ G++    +  AL+K  +K+ K+ E   +   +     + + E
Sbjct: 654 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 713

BLAST of Carg06047-RA vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 337.0 bits (863), Expect = 3.9e-92
Identity = 197/647 (30.45%), Postives = 339/647 (52.40%), Query Frame = 0

Query: 130 LIWVLMNIKNDYNLVLAFFDWSRIR----RDPSLEARCIVIHIAVASNDLRMAHELVRDH 189
           ++ VL   +ND  L   F D         +  SL     +IHI V S  L  A   +   
Sbjct: 81  VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA-MIHILVRSGRLSDAQSCLLRM 140

Query: 190 FLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYG 249
              S     V+  +  N L  T+   GSN   FD+  +  V+     EA        S G
Sbjct: 141 IRRS----GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 200

Query: 250 LVVTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEA 309
             V++D+CN  +  +      V +A   ++E    G+  N  + NI++ ALC+ GK+++ 
Sbjct: 201 FTVSIDACNALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 260

Query: 310 HRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISL 369
              L Q+  +   PD+V+Y+T+I  Y   G +++A +L++ M  +G  P  YTYN++I+ 
Sbjct: 261 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 320

Query: 370 LCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLD 429
           LCK GK   A++V  EM+   + PD   Y +L+    K G V    K+F +M S+ +  D
Sbjct: 321 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 380

Query: 430 YITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHN 489
            + +++++  F +SG + +    F+ +   G  PD V YT+LI  YC+ G +  A +L N
Sbjct: 381 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 440

Query: 490 EMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAG 549
           EM+Q G   +VVTY  ++ GLCKR  L  A++L +EM ++ L  +  T   +I+G CK G
Sbjct: 441 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 500

Query: 550 NIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFN 609
           N+  A+ L  +M+   I  D +TY T++D + K+GDI  A ++  +M+++ + PT ++++
Sbjct: 501 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 560

Query: 610 VLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQ 669
           +L+N  C  G L +   +   M+ K I P  +  N+++K YC   N +      + M ++
Sbjct: 561 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 620

Query: 670 GVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK--GYVPSVTSYNALIKGFYKKKKIL 729
           G +PD  ++N LI G  +  N+ +A+ L K+M E+  G VP V +YN+++ GF ++ ++ 
Sbjct: 621 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 680

Query: 730 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEK 768
           EA  +  +M E G+  DR  Y   ++ F  + N+     + DE +++
Sbjct: 681 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721

BLAST of Carg06047-RA vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 311.2 bits (796), Expect = 2.3e-84
Identity = 165/483 (34.16%), Postives = 275/483 (56.94%), Query Frame = 0

Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
           G   +T +++ +I  LC  G++ EA  L+ +M      P +++ + +++G C  G++  A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
           + LID M   G +PN  TY  ++ ++CK G+   A ++LR+M  +KI  D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
             K G +  A  LF+EM  K    D I YTTLI+GF  +G+  +   L  +MI R   PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
            VA++ LID + K G++ +A  LH EM+Q G++P+ VTY +LIDG CK  +LD AN +LD
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
            M  KG   N+ T+N +ING CKA  I   + L  +M + G+  DT+TY T+I  +C+LG
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
            +  A +L QEM++R ++P +V++ +L++G C  G  E    +   + +  +  +   YN
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496

Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
            ++   C  + ++   +++  +  +GV PD  T+NI+I G CK  +L EA  L+++M E 
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556

Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
           G+ P+  +YN LI+    +    ++ +L EE++  G   D     + VD+  +    +  
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616

Query: 758 LDL 761
           LD+
Sbjct: 617 LDM 619

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7033367.10.0e+00100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022922762.10.0e+0099.22pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
XP_023544192.10.0e+0098.32pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
XP_022989951.10.0e+0097.28pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
KAG6602680.10.0e+0099.29Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q0WVK71.1e-24557.97Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FIX32.2e-9229.97Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9LFC55.5e-9130.45Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... [more]
Q9ASZ83.2e-8334.16Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
Q0WKV31.8e-8133.13Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1E4820.0e+0099.22pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit... [more]
A0A6J1JLL10.0e+0097.28pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit... [more]
A0A0A0LXZ20.0e+0084.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1[more]
A0A5D3BEB00.0e+0083.56Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1BYF40.0e+0082.41pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT1G05670.18.0e-24757.97Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.28.0e-24757.97Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.11.6e-9329.97Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G01110.13.9e-9230.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12620.12.3e-8434.16Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 386..433
e-value: 5.1E-13
score: 49.0
coord: 456..505
e-value: 1.7E-16
score: 60.1
coord: 316..365
e-value: 2.9E-17
score: 62.6
coord: 631..680
e-value: 9.7E-13
score: 48.1
coord: 561..609
e-value: 3.8E-17
score: 62.2
coord: 701..744
e-value: 1.4E-8
score: 34.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 522..555
e-value: 6.0E-11
score: 41.9
coord: 278..309
e-value: 5.3E-6
score: 26.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 529..563
e-value: 1.1E-6
score: 26.4
coord: 599..633
e-value: 2.3E-6
score: 25.4
coord: 634..667
e-value: 7.2E-6
score: 23.9
coord: 459..493
e-value: 4.5E-9
score: 33.9
coord: 389..421
e-value: 2.6E-6
score: 25.3
coord: 424..457
e-value: 7.0E-5
score: 20.8
coord: 564..597
e-value: 1.3E-10
score: 38.7
coord: 705..737
e-value: 2.1E-7
score: 28.7
coord: 319..352
e-value: 1.2E-9
score: 35.7
coord: 354..387
e-value: 7.0E-10
score: 36.5
coord: 285..310
e-value: 2.1E-5
score: 22.4
coord: 670..703
e-value: 2.7E-10
score: 37.8
coord: 494..527
e-value: 6.2E-9
score: 33.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 527..561
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 13.252269
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 12.769972
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 492..526
score: 12.890547
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 632..666
score: 10.818861
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 282..316
score: 11.049048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 597..631
score: 11.443655
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 10.764054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 457..491
score: 12.517862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..456
score: 12.134216
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 667..701
score: 13.153618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 562..596
score: 13.866102
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 702..736
score: 11.662881
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 344..441
e-value: 5.2E-28
score: 100.3
coord: 442..554
e-value: 7.3E-39
score: 135.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 696..767
e-value: 2.4E-13
score: 52.0
coord: 555..621
e-value: 5.5E-20
score: 73.7
coord: 622..695
e-value: 2.0E-18
score: 68.6
coord: 256..343
e-value: 2.7E-20
score: 74.7
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 107..760
NoneNo IPR availablePANTHERPTHR47933:SF17PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEINcoord: 107..760
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 467..733

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg06047Carg06047gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06047-RA:1Carg06047-RA:1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg06047-RA:cdsCarg06047-RA:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg06047-RACarg06047-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding