Homology
BLAST of Carg06047-RA vs. NCBI nr
Match:
KAG7033367.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1578.5 bits (4086), Expect = 0.0e+00
Identity = 773/773 (100.00%), Postives = 773/773 (100.00%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. NCBI nr
Match:
XP_022922762.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922769.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922778.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1568.1 bits (4059), Expect = 0.0e+00
Identity = 767/773 (99.22%), Postives = 771/773 (99.74%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61 FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKN+YNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNEYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNS+LGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. NCBI nr
Match:
XP_023544192.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 760/773 (98.32%), Postives = 767/773 (99.22%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRR EPLRRTLKP
Sbjct: 61 FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRYEPLRRTLKP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNS+LGVSVTMAQFTNRL+YTYKYWG NPIAFDIFFQ LVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLMYTYKYWGLNPIAFDIFFQALVEFGSFSEARILLDK 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIG+AHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGRAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMN TTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNTTTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. NCBI nr
Match:
XP_022989951.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima] >XP_022989952.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1536.5 bits (3977), Expect = 0.0e+00
Identity = 752/773 (97.28%), Postives = 762/773 (98.58%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRY VMPYRTWGRAHMSARGNILPMVPPL TKWCAVSSR RCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYCVMPYRTWGRAHMSARGNILPMVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FS RWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTL P
Sbjct: 61 FSIRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKNDYNLVLAFFDW+RIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNS+LGVSVTMAQFT+RLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEAR LLD+
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTDRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDR 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALC+LGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPD VSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDAVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKI+PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKI
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKILPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIS 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
DYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 PDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR HGLVGDREIYNIFVDIFYEEGN+EITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNVEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. NCBI nr
Match:
KAG6602680.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 704/709 (99.29%), Postives = 707/709 (99.72%), Query Frame = 0
Query: 26 MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD
Sbjct: 1 MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 60
Query: 86 YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYES FRHDHLIWVLMNIKNDYNLVL
Sbjct: 61 YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESRFRHDHLIWVLMNIKNDYNLVL 120
Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
AFFDWSRIRRDPSLEARCIVIHI+VASNDLRMAHELVRDHFLNS+LGVSVTMAQFTNRLI
Sbjct: 121 AFFDWSRIRRDPSLEARCIVIHISVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLI 180
Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE
Sbjct: 181 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 240
Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
EVGMAIKFFREYGISWNTTSYNIVI ALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI
Sbjct: 241 EVGMAIKFFREYGISWNTTSYNIVICALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 300
Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV
Sbjct: 301 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 360
Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL
Sbjct: 361 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 420
Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
FHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK
Sbjct: 421 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 480
Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT
Sbjct: 481 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 540
Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML
Sbjct: 541 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 600
Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK
Sbjct: 601 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 660
Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL 735
EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL
Sbjct: 661 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGL 709
BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 850.9 bits (2197), Expect = 1.1e-245
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0
Query: 68 QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
QS + S L TRPFPDYSPKK ++RD E VH IT IKLRR+EPLRR+LKPYE F+
Sbjct: 28 QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87
Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A L+ +
Sbjct: 88 DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147
Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
L V+ + QF + L+YTYK WGS+P FD+FFQVLV+FG EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
++VDSCN +L+R++ + + AI FRE+ G+ WN SYNIVI+ +C+LG+IKEAH
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
LL+ M+ + TPDV+SYSTV++GYC+ GEL K KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
+I K EAE+ EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
TYT +I GF Q G ++E LFHEM +G +PD V +T LI+ YCKAG M AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
+Q G +PNVVTY LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
+A+ L+ E E G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
PDG T+ L+KGHCKARN+KEAWFL++EM KG+ SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
+F++MR GL D+EI++ F D Y+ + +D DE IE L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 341.7 bits (875), Expect = 2.2e-92
Identity = 205/684 (29.97%), Postives = 344/684 (50.29%), Query Frame = 0
Query: 133 VLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLG 192
+L+ +ND L+L F +W+ + +L +CI +HI + A L D +L
Sbjct: 54 LLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAED-VAAKTLD 113
Query: 193 VSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDS 252
F + L TY S FD+ + +A ++ ++G + V S
Sbjct: 114 DEYASLVFKS-LQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 173
Query: 253 CNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHRLLMQM 312
N L + + A F+E +S N +YNI+I C G I A L +M
Sbjct: 174 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 233
Query: 313 DYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKP 372
+ + P+VV+Y+T+IDGYC+L ++ KL+ M ++GL+PN +YN +I+ LC+ G+
Sbjct: 234 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 293
Query: 373 FEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTL 432
E VL EM + D+V Y TLI G+ K G+ A + EML + ITYT+L
Sbjct: 294 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 353
Query: 433 IQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGL 492
I ++G + +M RG P+ YT L+D + + G M +A+ + EM G
Sbjct: 354 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 413
Query: 493 TPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIG 552
+P+VVTY ALI+G C G+++ A +L++M +KGL +V +Y+++++G C++ ++ +A+
Sbjct: 414 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 473
Query: 553 LMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFC 612
+ EM GI PDTITY+++I +C+ +A L +EML GL P T+ L+N +C
Sbjct: 474 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 533
Query: 613 MLGMLEDGDVLLGWMLEKGIVPNAVTYN-------------------------------- 672
M G LE L M+EKG++P+ VTY+
Sbjct: 534 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 593
Query: 673 ------------------TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHC 732
+L+K +C++ M ++++ M + PDG +NI+I GHC
Sbjct: 594 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 653
Query: 733 KARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDRE 764
+A ++++A+ LYKEMV+ G++ + AL+K +K+ K+ E + + + + E
Sbjct: 654 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 713
BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 5.5e-91
Identity = 197/647 (30.45%), Postives = 339/647 (52.40%), Query Frame = 0
Query: 130 LIWVLMNIKNDYNLVLAFFDWSRIR----RDPSLEARCIVIHIAVASNDLRMAHELVRDH 189
++ VL +ND L F D + SL +IHI V S L A +
Sbjct: 81 VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA-MIHILVRSGRLSDAQSCLLRM 140
Query: 190 FLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYG 249
S V+ + N L T+ GSN FD+ + V+ EA S G
Sbjct: 141 IRRS----GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 200
Query: 250 LVVTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEA 309
V++D+CN + + V +A ++E G+ N + NI++ ALC+ GK+++
Sbjct: 201 FTVSIDACNALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 260
Query: 310 HRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISL 369
L Q+ + PD+V+Y+T+I Y G +++A +L++ M +G P YTYN++I+
Sbjct: 261 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 320
Query: 370 LCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLD 429
LCK GK A++V EM+ + PD Y +L+ K G V K+F +M S+ + D
Sbjct: 321 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 380
Query: 430 YITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHN 489
+ +++++ F +SG + + F+ + G PD V YT+LI YC+ G + A +L N
Sbjct: 381 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 440
Query: 490 EMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAG 549
EM+Q G +VVTY ++ GLCKR L A++L +EM ++ L + T +I+G CK G
Sbjct: 441 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 500
Query: 550 NIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFN 609
N+ A+ L +M+ I D +TY T++D + K+GDI A ++ +M+++ + PT ++++
Sbjct: 501 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 560
Query: 610 VLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQ 669
+L+N C G L + + M+ K I P + N+++K YC N + + M ++
Sbjct: 561 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 620
Query: 670 GVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK--GYVPSVTSYNALIKGFYKKKKIL 729
G +PD ++N LI G + N+ +A+ L K+M E+ G VP V +YN+++ GF ++ ++
Sbjct: 621 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 680
Query: 730 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEK 768
EA + +M E G+ DR Y ++ F + N+ + DE +++
Sbjct: 681 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 3.2e-83
Identity = 165/483 (34.16%), Postives = 275/483 (56.94%), Query Frame = 0
Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
G +T +++ +I LC G++ EA L+ +M P +++ + +++G C G++ A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
+ LID M G +PN TY ++ ++CK G+ A ++LR+M +KI D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
K G + A LF+EM K D I YTTLI+GF +G+ + L +MI R PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
VA++ LID + K G++ +A LH EM+Q G++P+ VTY +LIDG CK +LD AN +LD
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
M KG N+ T+N +ING CKA I + L +M + G+ DT+TY T+I +C+LG
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
+ A +L QEM++R ++P +V++ +L++G C G E + + + + + YN
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
++ C + ++ +++ + +GV PD T+NI+I G CK +L EA L+++M E
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
G+ P+ +YN LI+ + ++ +L EE++ G D + VD+ + +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Query: 758 LDL 761
LD+
Sbjct: 617 LDM 619
BLAST of Carg06047-RA vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 305.4 bits (781), Expect = 1.8e-81
Identity = 160/483 (33.13%), Postives = 270/483 (55.90%), Query Frame = 0
Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
G NT +++ +I LC G++ EA L+ +M PD+++ +T+++G C G+ +A
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
+ LID M G +PN+ TY +++++CK G+ A ++LR+M + I D V Y+ +I G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
K G + A LF+EM K I + ITY LI GF +G+ + L +MI R P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
V +++LID + K G++ +A LH EM+ G+ P+ +TY +LIDG CK LD AN+++D
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
M KG N+ T+N +ING CKA I + L +M + G+ DT+TY T+I +C+LG
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
+ A +L QEM++R + P +VT+ +L++G C G E + + + + + YN
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
++ C + ++ +++ + +GV P T+NI+I G CK L EA L+++M E
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
G+ P +YN LI+ ++ +L EE++ G D + +D+ + +
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Query: 758 LDL 761
LD+
Sbjct: 633 LDM 635
BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match:
A0A6J1E482 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430658 PE=4 SV=1)
HSP 1 Score: 1568.1 bits (4059), Expect = 0.0e+00
Identity = 767/773 (99.22%), Postives = 771/773 (99.74%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FSRRWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP
Sbjct: 61 FSRRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKN+YNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNEYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNS+LGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEE+GMAIKFFREYGISWNTTSYNIVIYALCRLGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR HGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match:
A0A6J1JLL1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486986 PE=4 SV=1)
HSP 1 Score: 1536.5 bits (3977), Expect = 0.0e+00
Identity = 752/773 (97.28%), Postives = 762/773 (98.58%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MNRY VMPYRTWGRAHMSARGNILPMVPPL TKWCAVSSR RCLQVSSNSASTCNFLPFL
Sbjct: 1 MNRYCVMPYRTWGRAHMSARGNILPMVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FS RWLSQS RVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTL P
Sbjct: 61 FSIRWLSQSQRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
YESSFRHDHLIWVLMNIKNDYNLVLAFFDW+RIRRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRDHFLNS+LGVSVTMAQFT+RLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEAR LLD+
Sbjct: 181 LVRDHFLNSNLGVSVTMAQFTDRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDR 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALC+LGKIK
Sbjct: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLLMQMDYRSSTPD VSYSTVIDGYCQLGELKKALKLIDDMQI+GLKPNSYTYNSII
Sbjct: 301 EAHRLLMQMDYRSSTPDAVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
SLLCKIGKPFEAEKVLREMMSQKI+PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKI
Sbjct: 361 SLLCKIGKPFEAEKVLREMMSQKILPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIS 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
DYITYTTLIQGFGQSGKVIEPQNLFHEMISRGF+PDGVAYTMLIDVYCKAGEMMKAFSL
Sbjct: 421 PDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK
Sbjct: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT
Sbjct: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNA+TYNTLMKQYCIRNNMNATTEIYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL
Sbjct: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR HGLVGDREIYNIFVDIFYEEGN+EITLDLCDEAIEKCLLVER
Sbjct: 721 EARELFEEMRGHGLVGDREIYNIFVDIFYEEGNVEITLDLCDEAIEKCLLVER 773
BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match:
A0A0A0LXZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1)
HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 629/748 (84.09%), Postives = 675/748 (90.24%), Query Frame = 0
Query: 26 MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
M+ PL K C V RF CLQVSSNSAS CNFLPF SRRWL+QS RVPSSFLLQTRPFPD
Sbjct: 1 MILPLHKKLCVVFFRFSCLQVSSNSASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPD 60
Query: 86 YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
YSPKKPTIRD EL+H+ITA IKLRRSEPL R LK +ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 61 YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVL 120
Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
AFFDW+R+RR+PSLEARCI+IHIAV SNDLR+AHELV D+FLNS L + V M QFT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLI 180
Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
YTYKYWG NPIAFDIFFQVLVE G SEAR LLDK LSYGLVVTVDSCN FLSR+ANNSE
Sbjct: 181 YTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240
Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
+ MAIK F EYGISWNTTSYNI+IY+LCRLGK+KEAHRLLMQMD+RSSTPDVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
DGYC LGELKKALKL+DDMQI+GLKPN YTYNSII LLCKIGK FEAEKVLREMMSQKI+
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
PD VVYTTLIHGF+K GHV+TANK FDEMLSKKI DYITYTTLIQGFGQ GKVIEPQNL
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420
Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
FHEMISRG KPD V YT LIDVYCKAGEM+ AFSLHNEMVQMG+TPN+VTYGALIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
GELDTANELLDEM KKGLQLNVC YNS++NG CKAGNI QAI LM EMEV GI+PD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540
Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
YTT+IDAYC+LGDI KAHKLLQEML RGLQPTVVTFNVLMNGFCMLGMLEDGD LLGWML
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
EKGIVP+A+TYNTLMKQ+CIRN+MN TT+IYK MRNQGV PD NT+NILIKGHCKARNLK
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660
Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFV 745
EAWFLYKEM+EKGYVP+VTSYNALIK FYKKKKILEARELFEEMR HGLV D EIYN FV
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720
Query: 746 DIFYEEGNMEITLDLCDEAIEKCLLVER 774
D+ YEEG++EITL+LCDEAIEKCLL ER
Sbjct: 721 DMCYEEGDVEITLNLCDEAIEKCLLNER 748
BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match:
A0A5D3BEB0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00390 PE=4 SV=1)
HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 625/748 (83.56%), Postives = 677/748 (90.51%), Query Frame = 0
Query: 26 MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85
M+ PL K C V RF CLQVSSNSAS CNFLPF FSRRWL+QS RVPS FLLQTRPFPD
Sbjct: 1 MILPLHKKLCVVFFRFCCLQVSSNSASRCNFLPFSFSRRWLTQSQRVPSPFLLQTRPFPD 60
Query: 86 YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145
YSPKKPTIRD EL+H+ITA IKLRRSEPL R LKP+ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 61 YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
Query: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205
AFFDW+R+RR+PSLEARCI++HIAV SNDLR+A ELV D+FLNS L + VTM +FT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIVHIAVVSNDLRLARELVHDYFLNSKLEIGVTMTKFTHRLI 180
Query: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265
YTYKYWGSNPIAFDI FQVLVE G SEAR LLDK LSYGLVVTVDSCN FLSR+ANNSE
Sbjct: 181 YTYKYWGSNPIAFDILFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240
Query: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325
+ MAIK F EYGISWNTTSYNI+IY+LCRLGK+KEAHRLLMQMD+RSSTPDVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385
DGYC LGELKKALKLIDDMQI+GLKPN YTYNSII LLCKIGK FEAEKVLREMMSQKI+
Sbjct: 301 DGYCHLGELKKALKLIDDMQIKGLKPNRYTYNSIILLLCKIGKLFEAEKVLREMMSQKII 360
Query: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445
PD VVYTTLIHGF+K GHVQ ANK FDEMLSKKI DYITYTTLIQGFGQ GKVIEPQN+
Sbjct: 361 PDNVVYTTLIHGFFKLGHVQAANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNI 420
Query: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505
FHEMISRG KPD V YT LIDVYCKAGEMM AFSLHNEMVQMG+TPN+VTYGALIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMMNAFSLHNEMVQMGVTPNIVTYGALIDGLCK 480
Query: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565
GELDTANELLDEM KKGLQLNVCTYNS++NG CKAGNIAQAI LM EME+ GI+PD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCTYNSMVNGICKAGNIAQAIKLMKEMELAGIDPDAIT 540
Query: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625
YTT+IDAYC+LGDIG AHKLLQEML RGLQPTVVTFNVLMNGFCMLGMLEDGD LLGWML
Sbjct: 541 YTTVIDAYCRLGDIGNAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685
EKGIVP+A+TYNTLMKQ+CIRN+MN TT+IY+ MRNQGV+PD NT+NILIKGHCKARNL+
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYQRMRNQGVMPDSNTYNILIKGHCKARNLR 660
Query: 686 EAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFV 745
EAWFLYKEM+EKGYVP+VTSYNALIK YK+KKILEARELFEEMR HGLV EIYN FV
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRLYKRKKILEARELFEEMRGHGLVAAGEIYNFFV 720
Query: 746 DIFYEEGNMEITLDLCDEAIEKCLLVER 774
D++YEEGN+EITL+LCDEA+EKCLL ER
Sbjct: 721 DMYYEEGNVEITLNLCDEAVEKCLLNER 748
BLAST of Carg06047-RA vs. ExPASy TrEMBL
Match:
A0A6J1BYF4 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006602 PE=4 SV=1)
HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 637/773 (82.41%), Postives = 688/773 (89.00%), Query Frame = 0
Query: 1 MNRYWVMPYRTWGRAHMSARGNILPMVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFL 60
MN YW +P RTW R + PMV P TK C VS CLQVSSNSAST +FLPFL
Sbjct: 1 MNSYWQLPCRTWER--------VSPMVLPSHTKRCVVSFWVHCLQVSSNSASTFSFLPFL 60
Query: 61 FSRRWLSQSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKP 120
FSRRWLS+ RVPSS LLQTRPFPDYSPKKPTIRD ELV ITA IKLRRSEPL+R LKP
Sbjct: 61 FSRRWLSR--RVPSSCLLQTRPFPDYSPKKPTIRDTELVSYITAAIKLRRSEPLKRILKP 120
Query: 121 YESSFRHDHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHE 180
+ES+FRH HLIWVLMNI+NDYNLVLAFFDW+R+RRDPSLEARCIVIHIAVASNDLRMAHE
Sbjct: 121 HESNFRHHHLIWVLMNIRNDYNLVLAFFDWARVRRDPSLEARCIVIHIAVASNDLRMAHE 180
Query: 181 LVRDHFLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDK 240
LVRD+F++S L V VT+AQFT+RLIYTYK WGSNPI FDIFF VLVE G FSEAR LLDK
Sbjct: 181 LVRDYFISSKLDVGVTVAQFTDRLIYTYKDWGSNPITFDIFFLVLVEIGLFSEARKLLDK 240
Query: 241 WLSYGLVVTVDSCNFFLSRMANNSEEVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIK 300
LSYGLV+TVDSCNFFLSR+A NSE + MAI+ F EYGI WNTTSYNI+IY+LC+LGKIK
Sbjct: 241 LLSYGLVITVDSCNFFLSRIARNSEGLEMAIEVFSEYGICWNTTSYNIIIYSLCQLGKIK 300
Query: 301 EAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSII 360
EAHRLL+QM++RSST DVVSYSTVI GYC LGELKKALKLIDDMQI GLKPN YTYNSII
Sbjct: 301 EAHRLLLQMEFRSSTSDVVSYSTVISGYCHLGELKKALKLIDDMQINGLKPNRYTYNSII 360
Query: 361 SLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIG 420
LLCKIGKPFEAEKVL EM+S+KI+PD VVYTTLIHGFYK GHVQTANKLFDEML KKI
Sbjct: 361 LLLCKIGKPFEAEKVLGEMISRKIIPDNVVYTTLIHGFYKLGHVQTANKLFDEMLLKKIS 420
Query: 421 LDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSL 480
DY+TYTTLIQGFGQSGKVIEP+NLFHEMISRG KPD V YT LI+VYCKAGEMMKAFSL
Sbjct: 421 PDYVTYTTLIQGFGQSGKVIEPENLFHEMISRGLKPDEVTYTTLINVYCKAGEMMKAFSL 480
Query: 481 HNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCK 540
HNEM+QMGLTPN+VTYGALIDGLCK GELDTANELLDEM KKGLQ+NVCTYNSIIN CK
Sbjct: 481 HNEMIQMGLTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQINVCTYNSIINCICK 540
Query: 541 AGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVT 600
AGNIAQ I LM EMEV GI PDTITYTTIIDAYC+ GDI KAHKLLQEML RGL PTVVT
Sbjct: 541 AGNIAQGIRLMEEMEVAGIYPDTITYTTIIDAYCRSGDIVKAHKLLQEMLDRGLPPTVVT 600
Query: 601 FNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMR 660
FNVLMNGFCMLGMLEDG++LLGWMLEKGI+PNA TYN LMKQYCI++NM+AT++IYKGMR
Sbjct: 601 FNVLMNGFCMLGMLEDGNMLLGWMLEKGIMPNATTYNNLMKQYCIKDNMHATSKIYKGMR 660
Query: 661 NQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKIL 720
+QGV+PD NT+NILIKGHCKARN+KEAWFL+KEMVEKGY+PSVTSYNALIKGFYKKKKIL
Sbjct: 661 DQGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYIPSVTSYNALIKGFYKKKKIL 720
Query: 721 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
EARELFEEMR GLV DREIYNIFVDI+YEEGN EITL+LCDEAIEKCLL ER
Sbjct: 721 EARELFEEMRGQGLVSDREIYNIFVDIYYEEGNTEITLNLCDEAIEKCLLGER 763
BLAST of Carg06047-RA vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 850.9 bits (2197), Expect = 8.0e-247
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0
Query: 68 QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
QS + S L TRPFPDYSPKK ++RD E VH IT IKLRR+EPLRR+LKPYE F+
Sbjct: 28 QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87
Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A L+ +
Sbjct: 88 DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147
Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
L V+ + QF + L+YTYK WGS+P FD+FFQVLV+FG EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
++VDSCN +L+R++ + + AI FRE+ G+ WN SYNIVI+ +C+LG+IKEAH
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
LL+ M+ + TPDV+SYSTV++GYC+ GEL K KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
+I K EAE+ EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
TYT +I GF Q G ++E LFHEM +G +PD V +T LI+ YCKAG M AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
+Q G +PNVVTY LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
+A+ L+ E E G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
PDG T+ L+KGHCKARN+KEAWFL++EM KG+ SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
+F++MR GL D+EI++ F D Y+ + +D DE IE L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
BLAST of Carg06047-RA vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 850.9 bits (2197), Expect = 8.0e-247
Identity = 411/709 (57.97%), Postives = 526/709 (74.19%), Query Frame = 0
Query: 68 QSHRVPSSFLLQTRPFPDYSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRH 127
QS + S L TRPFPDYSPKK ++RD E VH IT IKLRR+EPLRR+LKPYE F+
Sbjct: 28 QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87
Query: 128 DHLIWVLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFL 187
DHLIWVLM IK DY LVL FFDW+R RRD +LE+ CIVIH+AVAS DL++A L+ +
Sbjct: 88 DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147
Query: 188 NSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLV 247
L V+ + QF + L+YTYK WGS+P FD+FFQVLV+FG EAR + +K L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 248 VTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHR 307
++VDSCN +L+R++ + + AI FRE+ G+ WN SYNIVI+ +C+LG+IKEAH
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 308 LLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLC 367
LL+ M+ + TPDV+SYSTV++GYC+ GEL K KLI+ M+ +GLKPNSY Y SII LLC
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 368 KIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYI 427
+I K EAE+ EM+ Q I+PD VVYTTLI GF K G ++ A+K F EM S+ I D +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 428 TYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEM 487
TYT +I GF Q G ++E LFHEM +G +PD V +T LI+ YCKAG M AF +HN M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 488 VQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNI 547
+Q G +PNVVTY LIDGLCK G+LD+ANELL EM K GLQ N+ TYNSI+NG CK+GNI
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 548 AQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVL 607
+A+ L+ E E G+N DT+TYTT++DAYCK G++ KA ++L+EML +GLQPT+VTFNVL
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 608 MNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGV 667
MNGFC+ GMLEDG+ LL WML KGI PNA T+N+L+KQYCIRNN+ A T IYK M ++GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 668 IPDGNTFNILIKGHCKARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARE 727
PDG T+ L+KGHCKARN+KEAWFL++EM KG+ SV++Y+ LIKGF K+KK LEARE
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 728 LFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEKCLLVER 774
+F++MR GL D+EI++ F D Y+ + +D DE IE L+ E+
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
BLAST of Carg06047-RA vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 341.7 bits (875), Expect = 1.6e-93
Identity = 205/684 (29.97%), Postives = 344/684 (50.29%), Query Frame = 0
Query: 133 VLMNIKNDYNLVLAFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLG 192
+L+ +ND L+L F +W+ + +L +CI +HI + A L D +L
Sbjct: 54 LLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAED-VAAKTLD 113
Query: 193 VSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDS 252
F + L TY S FD+ + +A ++ ++G + V S
Sbjct: 114 DEYASLVFKS-LQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 173
Query: 253 CNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEAHRLLMQM 312
N L + + A F+E +S N +YNI+I C G I A L +M
Sbjct: 174 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 233
Query: 313 DYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKP 372
+ + P+VV+Y+T+IDGYC+L ++ KL+ M ++GL+PN +YN +I+ LC+ G+
Sbjct: 234 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 293
Query: 373 FEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTL 432
E VL EM + D+V Y TLI G+ K G+ A + EML + ITYT+L
Sbjct: 294 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 353
Query: 433 IQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGL 492
I ++G + +M RG P+ YT L+D + + G M +A+ + EM G
Sbjct: 354 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 413
Query: 493 TPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIG 552
+P+VVTY ALI+G C G+++ A +L++M +KGL +V +Y+++++G C++ ++ +A+
Sbjct: 414 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 473
Query: 553 LMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFC 612
+ EM GI PDTITY+++I +C+ +A L +EML GL P T+ L+N +C
Sbjct: 474 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 533
Query: 613 MLGMLEDGDVLLGWMLEKGIVPNAVTYN-------------------------------- 672
M G LE L M+EKG++P+ VTY+
Sbjct: 534 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 593
Query: 673 ------------------TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHC 732
+L+K +C++ M ++++ M + PDG +NI+I GHC
Sbjct: 594 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 653
Query: 733 KARNLKEAWFLYKEMVEKGYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDRE 764
+A ++++A+ LYKEMV+ G++ + AL+K +K+ K+ E + + + + E
Sbjct: 654 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 713
BLAST of Carg06047-RA vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 337.0 bits (863), Expect = 3.9e-92
Identity = 197/647 (30.45%), Postives = 339/647 (52.40%), Query Frame = 0
Query: 130 LIWVLMNIKNDYNLVLAFFDWSRIR----RDPSLEARCIVIHIAVASNDLRMAHELVRDH 189
++ VL +ND L F D + SL +IHI V S L A +
Sbjct: 81 VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA-MIHILVRSGRLSDAQSCLLRM 140
Query: 190 FLNSSLGVSVTMAQFTNRLIYTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYG 249
S V+ + N L T+ GSN FD+ + V+ EA S G
Sbjct: 141 IRRS----GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 200
Query: 250 LVVTVDSCNFFLSRMANNSEEVGMAIKFFREY---GISWNTTSYNIVIYALCRLGKIKEA 309
V++D+CN + + V +A ++E G+ N + NI++ ALC+ GK+++
Sbjct: 201 FTVSIDACNALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 260
Query: 310 HRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISL 369
L Q+ + PD+V+Y+T+I Y G +++A +L++ M +G P YTYN++I+
Sbjct: 261 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 320
Query: 370 LCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLD 429
LCK GK A++V EM+ + PD Y +L+ K G V K+F +M S+ + D
Sbjct: 321 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 380
Query: 430 YITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHN 489
+ +++++ F +SG + + F+ + G PD V YT+LI YC+ G + A +L N
Sbjct: 381 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 440
Query: 490 EMVQMGLTPNVVTYGALIDGLCKRGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAG 549
EM+Q G +VVTY ++ GLCKR L A++L +EM ++ L + T +I+G CK G
Sbjct: 441 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 500
Query: 550 NIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFN 609
N+ A+ L +M+ I D +TY T++D + K+GDI A ++ +M+++ + PT ++++
Sbjct: 501 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 560
Query: 610 VLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQ 669
+L+N C G L + + M+ K I P + N+++K YC N + + M ++
Sbjct: 561 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 620
Query: 670 GVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK--GYVPSVTSYNALIKGFYKKKKIL 729
G +PD ++N LI G + N+ +A+ L K+M E+ G VP V +YN+++ GF ++ ++
Sbjct: 621 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 680
Query: 730 EARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEITLDLCDEAIEK 768
EA + +M E G+ DR Y ++ F + N+ + DE +++
Sbjct: 681 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
BLAST of Carg06047-RA vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 311.2 bits (796), Expect = 2.3e-84
Identity = 165/483 (34.16%), Postives = 275/483 (56.94%), Query Frame = 0
Query: 278 GISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVIDGYCQLGELKKA 337
G +T +++ +I LC G++ EA L+ +M P +++ + +++G C G++ A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 338 LKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIVPDKVVYTTLIHG 397
+ LID M G +PN TY ++ ++CK G+ A ++LR+M +KI D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 398 FYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGFKPD 457
K G + A LF+EM K D I YTTLI+GF +G+ + L +MI R PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 458 GVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCKRGELDTANELLD 517
VA++ LID + K G++ +A LH EM+Q G++P+ VTY +LIDG CK +LD AN +LD
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 518 EMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTITYTTIIDAYCKLG 577
M KG N+ T+N +ING CKA I + L +M + G+ DT+TY T+I +C+LG
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 578 DIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWMLEKGIVPNAVTYN 637
+ A +L QEM++R ++P +V++ +L++G C G E + + + + + YN
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 638 TLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLKEAWFLYKEMVEK 697
++ C + ++ +++ + +GV PD T+NI+I G CK +L EA L+++M E
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 698 GYVPSVTSYNALIKGFYKKKKILEARELFEEMREHGLVGDREIYNIFVDIFYEEGNMEIT 757
G+ P+ +YN LI+ + ++ +L EE++ G D + VD+ + +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Query: 758 LDL 761
LD+
Sbjct: 617 LDM 619
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7033367.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022922762.1 | 0.0e+00 | 99.22 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... | [more] |
XP_023544192.1 | 0.0e+00 | 98.32 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... | [more] |
XP_022989951.1 | 0.0e+00 | 97.28 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... | [more] |
KAG6602680.1 | 0.0e+00 | 99.29 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q0WVK7 | 1.1e-245 | 57.97 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Q9FIX3 | 2.2e-92 | 29.97 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9LFC5 | 5.5e-91 | 30.45 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Q9ASZ8 | 3.2e-83 | 34.16 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
Q0WKV3 | 1.8e-81 | 33.13 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E482 | 0.0e+00 | 99.22 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit... | [more] |
A0A6J1JLL1 | 0.0e+00 | 97.28 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit... | [more] |
A0A0A0LXZ2 | 0.0e+00 | 84.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1 | [more] |
A0A5D3BEB0 | 0.0e+00 | 83.56 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1BYF4 | 0.0e+00 | 82.41 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT1G05670.1 | 8.0e-247 | 57.97 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 8.0e-247 | 57.97 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G39710.1 | 1.6e-93 | 29.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G01110.1 | 3.9e-92 | 30.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12620.1 | 2.3e-84 | 34.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |