Carg04549-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04549-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rhomboid-like protein 19
Location	Carg_Chr04: 19818542 .. 19822314 (+)
Sequence length	1281
RNA-Seq Expression	Carg04549-RA
Synteny	Carg04549-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACCCACCTCCTCTGTAACCCAAAAGTCTCCCGCGAAGCAAAACAGTCCATTTTTAGCACACAACTCCGATCACCGTCGTCCACGGTCTAATTCAACGGTCACTATCCACCGTCTCTGCCTATGAGTACTCCAGCAGTTCCGGGGGTAAGCTCCGTTACATTTGTTTGTTTTAATCTTCTCCAAATTGGCGGTCGATTAGTCGCATTCAGATCTCGCAGTTCGTCTTTTCTATATCGGAACGTGTATGCTAGATCTTGACATTTTATCGAAATTCGGCGACGTTTCTAATGATGTTTTGTTGTTTTGTGTAATTCGTTTGGTAATTGGATAGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGTATCTTGTTTGGAGAACTTAGTCTTTGGATTAGTGGTAGTGATAACTGTGCAAAGCTGATGCGTACGTTCTTGCAGTAATGCCCGTAGGTTACCGGTTAGAAATGTCTTTGTTTTCTCGAGTCGAAATTTAGTCAGGAAAAAATCAAGAATCTTGTGATCACAGATGAAAATTTATTGAATTCTTGTATCTGCTAGGATTTCAGGTGGGCAGGTATATGTTACATGTTTTGAATTGAACATAGTGATCCAGAGGCCTGTCTTGTGTCCTGTGGGATTGATAGAAGTTAGTCTATACTTTAGTTTCCATCCATGGAAATTTGGTCGTAATTGTAAAATGCAATGACTCTGTTGATTCCTCTATTCAATTTATTGGCCATAACATCCAAGTAGCGGTTTACCCTTCTTCAGATAAAACATTTATGTTGATAAGAAGTTGCAACAAACTTTTCGAGAGGCTACTGTTGTGGATTATTGAAAGAAGTATTCCCACATTGGCTAATTAAGAGGAAGATCATGGGTTTATAAGTAAGGAACACCATCTCCATTGATATGAGGCCTTTTGGAGAAACTAAAAGAAAAGTCATGAGAACTTATGCTCAAAGTGGACAATATCATATCATTGTAGAGAGTTGTGGTTCCCAACAGCTATATGATCTACTGCTTTAGGATTCCAAGGGTTGCGTTCCAGAGGCCTAAGTTTACTGCTTTGATGTCTAGAACTCTTTCATTTTTTTAATCTGATGTTTTCACTGCTATACAATCTGAATTATTAACACGAGTGTGAAATGTGGACCCCTTATTATTCTGAATTGGCTTTAGTTATTTAACTACAATATTTTAGTTTCCTGATAGGAAGAAAGATTATTAATAAGAGTAGAAATGTAGACAATGATATCCTCTGCACTAGAGTATATCATTTTATATATAAATGATCCGAGTAAAAATACGCAAAAATGATCCCACAGTCTAAATGTTTACACTCCTGGGCCTGCAAGAGGTAAAATATAAACATCTTTTTCAGAAAACTTCTCCATCTGAATATTTTTGTTAGAAAATACGAGTCTTCTGTTCTAACTCGACTATTCAATGAAGAGCTGAAACTGCAATATGACCTCAATCTTTTACTAGCCATCTTCTGATAACCCATAATTTACTACAAAAATCAAAATGGAGAAATATATCATTTACCAAAGAGGTGAAGGGCCATTAATTTAGGGAAAACAAGGATGACTGATGCAATGATAGTATAGACATGAAAGCTCGATCAACTGCAAATCATGAGTTATTGTCATTCTATTGGATCTTCTGTTCATCAAAATACCAAAATTGTCATTATCTTTCAGTATTCTATCGACGTTTTTCACTGCTTATATATAGAATTATCAAGCTAAGACCATATTGAATCTCCCACTCTTAACTATAACAATAAAACTATTGATCAAAATGTAGAAATTTGTGCCCACAGTTTAATTCATTATTTCATTTTATTTGTGTGATGTGAGAATATTTCCTCTGTAGTGTAGGAATCGATTAAATTCAGGGAAGGCAGGTATCTGACCAAGTTTTGAGTAGTTAAATTTACATGGAAAGTGTGTAAACAATAAATGGTTGGGTCATTCATTCCTTTGAACCTCTATTTTGTAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGTATGCACTCACGTTGTCATACACTATTTTGTTTCCCTCTACAGAATCATAATTTGAACATATCTCACTATTTTTTGTTCAATCTTCACTGGAAGTTAGACTCACTGAGAGCCATATATTGCAGGCTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTGTAAGTGCTACCGAGTCCTCGTGCATCAAAGGCTCTTTTTAGGCATACTCGTGTACATGTCTTTAGCTGATAGCGCATTATGAATTTTCATTTAAGCCATTTTTTGTCCGATTCATTCCATATAAGTATTTTACAGTCTCCCTTTATCAACTCCTCTTTAAACATGTTTCATTTTATGCCTCTCGGTCTTTCCATACATCTTGTTTACATATTTTTTTTCGGTCTCAGTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGGTATGAAAAATGTAGATAGCCATTTCCAAATTTTGAATGGTTTTTATCAGAGTTTTTCTTGAACGCTCTTTTGGGCTTTGCTTGAAACTTCATGCAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAGCTCCTACGGTATTCTGTTTATCTTGAATTTCTTTTTTCTACTTTTTAAGCTTCTCTTGCCCATGTTTTCAGGAATATTCTGTGTTCTCTCTCTCCATAGTCCATAGCGTACTATGACTCTTGATGTTCCTGTGCAGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCCCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGGTAATATTTGCTAATATTTTTCTTCCGACTCATAAGGTTAAGTGTAAAGAATAGTAAAGATTGAAAATTCTACTGGTTGCAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGATAATATAATCCTATATAAGTTGGCGTTCATCTGATGATCAACTACTTGGGGGGGACTGTGCAGTATATCAAGAGGTCCTCTTTTCTTTATTCTGTTATGCAATTTTGCTTTGCACATTCCTTCTGAGTTGCAAAAATGTTGCTTCATTTATGCCCTTTGCAGCATTATTGTGGATTTATTTGTATACAGCCCAAGATATATAGAGTACAATTTCCTCCCAAGTTTCTCCCA

mRNA sequence

AAGACCCACCTCCTCTGTAACCCAAAAGTCTCCCGCGAAGCAAAACAGTCCATTTTTAGCACACAACTCCGATCACCGTCGTCCACGGTCTAATTCAACGGTCACTATCCACCGTCTCTGCCTATGAGTACTCCAGCAGTTCCGGGGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGCTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAGCTCCTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCCCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGATAATATAATCCTATATAAGTTGGCGTTCATCTGATGATCAACTACTTGGGGGGGACTGTGCAGTATATCAAGAGGTCCTCTTTTCTTTATTCTGTTATGCAATTTTGCTTTGCACATTCCTTCTGAGTTGCAAAAATGTTGCTTCATTTATGCCCTTTGCAGCATTATTGTGGATTTATTTGTATACAGCCCAAGATATATAGAGTACAATTTCCTCCCAAGTTTCTCCCA

Coding sequence (CDS)

ATGAGTACTCCAGCAGTTCCGGGGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGCTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAGCTCCTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCCCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGA

Protein sequence

MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLITAGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQESGRDATENV

Homology

[Close]

BLAST of Carg04549-RA vs. NCBI nr
Match: KAG7033005.1 (Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 599.7 bits (1545), Expect = 1.4e-167
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 301 GRDATENV 309
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of Carg04549-RA vs. NCBI nr
Match: KAG6602322.1 (Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 598.2 bits (1541), Expect = 4.0e-167
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG IVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 301 GRDATENV 309
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of Carg04549-RA vs. NCBI nr
Match: XP_022964776.1 (rhomboid-like protein 19 [Cucurbita moschata])

HSP 1 Score: 595.1 bits (1533), Expect = 3.4e-166
Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG IVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RLLCGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 301 GRDATENV 309
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of Carg04549-RA vs. NCBI nr
Match: XP_023552913.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 594.0 bits (1530), Expect = 7.6e-166
Identity = 305/308 (99.03%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG IVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPV+SIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVSSIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RLLCGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 301 GRDATENV 309
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of Carg04549-RA vs. NCBI nr
Match: XP_022990416.1 (rhomboid-like protein 19 [Cucurbita maxima])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 302/308 (98.05%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG +VSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAV VSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVFVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RL+CGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RLICGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSDQES 300

Query: 301 GRDATENV 309
            RDATENV
Sbjct: 301 VRDATENV 308

[Close]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.2e-118
Identity = 214/308 (69.48%), Postives = 255/308 (82.79%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MS+P    G  +FT FTKLCKGLA+VLV GH++VQ  PA V YLALIPARTIPFAWNLIT
Sbjct: 1   MSSP----GTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           +GY E +VYG + STV LLF+GK LEP+WGS EFLKFIFVVNF+T LCVF+TAIALYYIT
Sbjct: 61  SGYFELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           + E YLY+P +GF+G+LAG LVGIKQIIPDQE+ LLK++ KWLPS+ +++SIA S +T  
Sbjct: 121 RLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLD 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           +A YLPT+IFGTY+ W+YLRY QR+PETKL+GDPSDDFAFS+FFPELLRPVIDP+A IFH
Sbjct: 181 SAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           R+LCGRS + ++  DY+ +GAPLPGSD  EASRRRERGARALEERL  ERL  AR+  E 
Sbjct: 241 RMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDEL 300

Query: 301 GRDATENV 309
             D  +NV
Sbjct: 301 QSDGLDNV 304

[Close]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 92/286 (32.17%), Postives = 148/286 (51.75%), Query Frame = 0


Query: 23  LAVVLVGGHILVQVFPAVVSY------------LALIPARTIP---FAWNLITAGYVEQT 82
           L  +L    ++V+   AVV +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAVVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 83  VYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLY 142
           V+   +S   ++  G+LLEP+WG+ E L F  VVN    L   +  +  Y  +    YL+
Sbjct: 72  VWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTYMASFNLVYLF 131

Query: 143 -LPVSGFYGILAGFLVGIKQIIPD-QELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYL 202
            + + G  G L G LV +KQ + D   L + ++R   +P L + + + +   T   +  L
Sbjct: 132 TIRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLALLLLLRLATLLQSPAL 191

Query: 203 PTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLL-- 262
            +  FG   SW+YLR++QR   ++ +GD +D FAF++FFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHGLLVK 251

Query: 263 ---CGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERL 287
              C ++    D    ++    LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-27
Identity = 86/253 (33.99%), Postives = 136/253 (53.75%), Query Frame = 0


Query: 44  LALIPARTIP---FAWNLITAGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFV 103
           LA+ P    P   + W L T G +EQ V+   +S   ++  G+LLEP+WG+ E L F  V
Sbjct: 45  LAVTPGYLFPPNFWIWTLATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSV 104

Query: 104 VNFITSLCVFITAIALYYITQEESYLY-LPVSGFYGILAGFLVGIKQIIPD-QELPLLKL 163
           VN    L      +  Y  +    YL+ + + G  G L G LV +KQ + D   L + ++
Sbjct: 105 VNVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQV 164

Query: 164 RTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDF 223
           R   +P L + + + +   T   +  L +  FG   SW+YLR++QR   ++ +GD +D F
Sbjct: 165 RVSVVPMLLLGLLLLLRLATLLQSPALASYGFGLISSWVYLRFYQR--HSRGRGDMADHF 224

Query: 224 AFSSFFPELLRPVIDPVASIFHRLL-----CGRSESPNDSEDYTAAGAPLPGSDPIEASR 283
           AF++FFPE+L+PV+  +A++ H LL     C ++    D    ++    LPG+DP +A R
Sbjct: 225 AFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAER 284

Query: 284 RRERGARALEERL 287
           RR+   +AL ERL
Sbjct: 285 RRQLALKALNERL 295

[Close]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-27
Identity = 91/286 (31.82%), Postives = 146/286 (51.05%), Query Frame = 0


Query: 23  LAVVLVGGHILVQVFPAVVSY------------LALIPARTIP---FAWNLITAGYVEQT 82
           L  +L    ++V+   A V +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAAVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 83  VYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLY 142
           V+   +S   ++  G+LLEP+WG+ E L F  VVN    L      +  Y  +    YL+
Sbjct: 72  VWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLF 131

Query: 143 -LPVSGFYGILAGFLVGIKQIIPD-QELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYL 202
            + + G  G L G LV +KQ + D   L + ++R   +P L + + + +   T   +  L
Sbjct: 132 TVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLRLATLLQSPAL 191

Query: 203 PTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLL-- 262
            +  FG   SW+YLR++QR   ++ +GD +D FAF++FFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHSLLVK 251

Query: 263 ---CGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERL 287
              C ++    D    ++    LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11
Identity = 65/273 (23.81%), Postives = 124/273 (45.42%), Query Frame = 0


Query: 44  LALIPARTIPFAWNLITAGYVEQTVYGAIVSTVGLLFVGKLLEPIW-GSREFLKFIFVVN 103
           L ++P++   +  +L+ + +++   +  +V+ + L+  G  +E  W  S+E  KFI V+ 
Sbjct: 68  LQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEMFKFIIVLG 127

Query: 104 FITSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLK----- 163
            +T++ + +  + + + + +   L +P+ G Y IL GF +  +Q++P+  +  LK     
Sbjct: 128 SLTNVLIIMLTLLVSFFSNKVR-LDIPLDGNYTILIGFPIIYRQLLPETTIIHLKTPQFL 187

Query: 164 ---LRTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQR--------KP 223
               R K LP   +                L +I    + SW YLR++Q+         P
Sbjct: 188 AKNFRFKLLPIFVMFTMTVTQIIWFHHFAQLFSIWVTFFASWSYLRFFQKLAPLNCPSLP 247

Query: 224 ETK-------LKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLLCGRSE--SPNDSEDYT 283
            T        L GD SD F    FFP+L++P++ P+ +  + ++  + +   P    D  
Sbjct: 248 TTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIKPFHDIDID 307

Query: 284 AAG--APLPGSDPIEA--SRRRERGARALEERL 287
                A   G+  I     RRR+   + LEER+
Sbjct: 308 IGNTIAESRGAKKIMTVEERRRQLALQVLEERM 339

[Close]

BLAST of Carg04549-RA vs. ExPASy TrEMBL
Match: A0A6J1HJV9 (rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111464773 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.6e-166
Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG IVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RLLCGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 301 GRDATENV 309
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of Carg04549-RA vs. ExPASy TrEMBL
Match: A0A6J1JMW3 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111487282 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.0e-165
Identity = 302/308 (98.05%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGYVEQTVYG +VSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAV VSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVFVSIAVSCWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           RL+CGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RLICGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSDQES 300

Query: 301 GRDATENV 309
            RDATENV
Sbjct: 301 VRDATENV 308

[Close]

BLAST of Carg04549-RA vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 279/308 (90.58%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGG G FTGFTKLCKGLAVVL+GGHILVQ+FPAVV+YLALIPARTIPFAWNL+T
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGY+EQ++YG +VSTVGLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQ+IPDQELP+LKL+ KWLPS+AVLVSIA+S WTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDP+ASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           R+LCGRSES +++EDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATENV 309
           G+DATENV
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Carg04549-RA vs. ExPASy TrEMBL
Match: A0A0A0KQN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 277/308 (89.94%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTP+VPGG G FTGFTKLCKG+AVVL+GGHILVQ+FP VV+YLALIPARTIPFAWNL+T
Sbjct: 1   MSTPSVPGGSGSFTGFTKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGY+EQ++YG +VSTVGLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQ+IPDQELP+LKL+ KWLPSLAVL+SIAVS WTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSLAVLLSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDP+ASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           R+LCGRSESP+++EDYTAAGAPLPGSDP+EASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATENV 309
           G+DATENV
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Carg04549-RA vs. ExPASy TrEMBL
Match: A0A1S3CPF3 (rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 279/308 (90.58%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MSTPAVPGG G FTGFTKLCKGLAVVL+GGHILVQ+FPAVV+YLALIPARTIPFAWNL+T
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           AGY+EQ++YG +VSTVGLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           QEESYLYLPVSGFYGILAGFLVGIKQ+IPDQELP+LKL+ KWLPS+AVLVSIA+S WTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDP+ASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           R+LCGRSES +++EDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATENV 309
           G+DATENV
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Carg04549-RA vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related )

HSP 1 Score: 427.6 bits (1098), Expect = 8.7e-120
Identity = 214/308 (69.48%), Postives = 255/308 (82.79%), Query Frame = 0


Query: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60
           MS+P    G  +FT FTKLCKGLA+VLV GH++VQ  PA V YLALIPARTIPFAWNLIT
Sbjct: 1   MSSP----GTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLIT 60

Query: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120
           +GY E +VYG + STV LLF+GK LEP+WGS EFLKFIFVVNF+T LCVF+TAIALYYIT
Sbjct: 61  SGYFELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYIT 120

Query: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180
           + E YLY+P +GF+G+LAG LVGIKQIIPDQE+ LLK++ KWLPS+ +++SIA S +T  
Sbjct: 121 RLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLD 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240
           +A YLPT+IFGTY+ W+YLRY QR+PETKL+GDPSDDFAFS+FFPELLRPVIDP+A IFH
Sbjct: 181 SAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFH 240

Query: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300
           R+LCGRS + ++  DY+ +GAPLPGSD  EASRRRERGARALEERL  ERL  AR+  E 
Sbjct: 241 RMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDEL 300

Query: 301 GRDATENV 309
             D  +NV
Sbjct: 301 QSDGLDNV 304

The following BLAST results are available for this feature:

BLAST of Carg04549-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033005.1	1.4e-167	100.00	Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602322.1	4.0e-167	99.68	Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022964776.1	3.4e-166	99.35	rhomboid-like protein 19 [Cucurbita moschata]	[more]
XP_023552913.1	7.6e-166	99.03	rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]	[more]
XP_022990416.1	1.9e-164	98.05	rhomboid-like protein 19 [Cucurbita maxima]	[more]

BLAST of Carg04549-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF05	1.2e-118	69.48	Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1	[more]
Q9WUH1	1.7e-27	32.17	Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1	[more]
A4FUB8	6.5e-27	33.99	Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1	[more]
Q12893	6.5e-27	31.82	Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1	[more]
Q12239	2.2e-11	23.81	Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Carg04549-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJV9	1.6e-166	99.35	rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111464773 PE=4 SV=1	[more]
A0A6J1JMW3	9.0e-165	98.05	rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111487282 PE=4 SV=1	[more]
A0A5D3C5G3	1.7e-155	90.58	Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KQN7	1.7e-155	89.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1	[more]
A0A1S3CPF3	1.7e-155	90.58	rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1	[more]

BLAST of Carg04549-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07950.1	8.7e-120	69.48	rhomboid protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01160	DUF1751_2	coord: 48..146 e-value: 2.9E-46 score: 169.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..277
None	No IPR available	PANTHER	PTHR13377:SF9	RHOMBOID-LIKE PROTEIN 19	coord: 9..308
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 16..210 e-value: 4.2E-6 score: 28.5
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 19..206
IPR013861	TMEM115/Pdh1/Rbl19	PFAM	PF08551	DUF1751	coord: 48..146 e-value: 2.0E-33 score: 114.9
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	PTHR13377	PLACENTAL PROTEIN 6	coord: 9..308

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04549	Carg04549	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04549-RA:1	Carg04549-RA:1	exon
Carg04549-RA:2	Carg04549-RA:2	exon
Carg04549-RA:3	Carg04549-RA:3	exon
Carg04549-RA:4	Carg04549-RA:4	exon
Carg04549-RA:5	Carg04549-RA:5	exon
Carg04549-RA:6	Carg04549-RA:6	exon
Carg04549-RA:7	Carg04549-RA:7	exon
Carg04549-RA:8	Carg04549-RA:8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04549-RA:five_prime_utr	Carg04549-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04549-RA:cds	Carg04549-RA:cds	CDS
Carg04549-RA:cds	Carg04549-RA:cds_2	CDS
Carg04549-RA:cds	Carg04549-RA:cds_3	CDS
Carg04549-RA:cds	Carg04549-RA:cds_4	CDS
Carg04549-RA:cds	Carg04549-RA:cds_5	CDS
Carg04549-RA:cds	Carg04549-RA:cds_6	CDS
Carg04549-RA:cds	Carg04549-RA:cds_7	CDS
Carg04549-RA:cds	Carg04549-RA:cds_8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04549-RA:three_prime_utr	Carg04549-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04549-RA	Carg04549-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005794	Golgi apparatus