Carg04486-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04486-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein WVD2-like 7
Location	Carg_Chr04: 20202934 .. 20205066 (+)
Sequence length	1436
RNA-Seq Expression	Carg04486-RA
Synteny	Carg04486-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTATTGTTTTACTGTATAGATAAAGAAAATTGCAGAACCAGATCTTCCTGTTTTTGCTTTTCACTTTTTTTACTCTTGTACCCGATCTTCTTTTTCTCTGGTTTGAAATTCAAATTTGGAACCCCAAGCAAGCATTTCTTGAGCTTGGATTCTTTCTTGCAGTTGGAGCTTCCATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGATTTCCCAATGAATCCATGGAGGTCGGTCAGTCAGTCAGTCACTCAGTTAATTTTGTGCATTTTGTTTGAATTCGATTCGATTTCAATCGTTTAATCTCTGTTTTTCTCTGTTTCTTATAGGGTAATCGTCCGACTCATGGTCTTGCTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAAGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTCGCTGCAACTGAAACTGCACAACATTTTGCTGCCAATGACAATGGCGATGGCTGCGGCGACCCTTCTGATCTTAAGGAGGAGAGAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCGAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTGGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGTTGCCACACTTTTCGTCTGTGAATTTATCTTCTGAATATGGGGATTTTGTTCTAAATCTTTCTGTAATATTTGGTTATCTGCAGGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGGTTGCTTTTCTCATGAATCAGCAATAACTGAAGTGTCATCTTATAGTATTCATTTTGTTTGGAGATAGCTGATCAACATTCTTGTGTTAATAACTGCAGAAACAAATTGTACTCGCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCCAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGTACCTTAAACTCTGTCAGTTCAAGTGCTAATTTTGGTTGCTTGTTTCTTCTTAATACCTACAGAAACTTGAAGAGAAGTTCAACAAAAATGAGTCACACAAAAAGGTGCAACTTCAAACAAAACTAAAGGTATCTATTTATTAAGTGAGCATAAGCTCTAGTGACTTTACTTTTAGTTTTTTCAAAAGGTCTGGTATCAATAGAAATGTATTCCTTACTTGCTGACGTGGGACTCCCATCCAACAATCCTCGACATATACTGCAAGCCATGACTCAACGGACTAATATTCCTGCAGGAGAAAGCCGAAACAGAGATAACGAAATTACGTCAAAGCTTCTGCTTCAAAGCCAGGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGTAAGTCCCATGTGCTAATAGCCTAATACAACGTGCAATGAATTGGTATAAATACTTCTGTCCCTTTGTTTCTTAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAGCTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGTTAAGAGCAGCAGAAGCATGAGTAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCATGAGAATATATCTCCTAACATTCAGCAGTGA

mRNA sequence

AAAGTATTGTTTTACTGTATAGATAAAGAAAATTGCAGAACCAGATCTTCCTGTTTTTGCTTTTCACTTTTTTTACTCTTGTACCCGATCTTCTTTTTCTCTGGTTTGAAATTCAAATTTGGAACCCCAAGCAAGCATTTCTTGAGCTTGGATTCTTTCTTGCAGTTGGAGCTTCCATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGATTTCCCAATGAATCCATGGAGGGTAATCGTCCGACTCATGGTCTTGCTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAAGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTCGCTGCAACTGAAACTGCACAACATTTTGCTGCCAATGACAATGGCGATGGCTGCGGCGACCCTTCTGATCTTAAGGAGGAGAGAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCGAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTGGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGTTGCCACACTTTTCGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGAAACAAATTGTACTCGCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCCAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAGCTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGTTAAGAGCAGCAGAAGCATGAGTAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCATGAGAATATATCTCCTAACATTCAGCAGTGA

Coding sequence (CDS)

ATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGATTTCCCAATGAATCCATGGAGGGTAATCGTCCGACTCATGGTCTTGCTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAAGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTCGCTGCAACTGAAACTGCACAACATTTTGCTGCCAATGACAATGGCGATGGCTGCGGCGACCCTTCTGATCTTAAGGAGGAGAGAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCGAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTGGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGTTGCCACACTTTTCGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGAAACAAATTGTACTCGCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCCAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAGCTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGTTAAGAGCAGCAGAAGCATGAGTAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCATGAGAATATATCTCCTAACATTCAGCAGTGA

Protein sequence

MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYVEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETKRNKLYSPFSFSTFSLRTDERAARRKEASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSSRSMSKNVQGKARSTSLQTLMSAHENISPNIQQ

Homology

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BLAST of Carg04486-RA vs. NCBI nr
Match: KAG7033067.1 (Protein WVD2-like 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 809.3 bits (2089), Expect = 1.6e-230
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT
Sbjct: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120

Query: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180
           ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS
Sbjct: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180

Query: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240
           KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL
Sbjct: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240

Query: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300
           NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK
Sbjct: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300

Query: 301 RNKLYSPFSFSTFSLRTDERAARRKEASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSP 360
           RNKLYSPFSFSTFSLRTDERAARRKEASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSP
Sbjct: 301 RNKLYSPFSFSTFSLRTDERAARRKEASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSP 360

Query: 361 KLGRSSNSQTGEATMAHSCHKPPVKSSRSMSKNVQGKARSTSLQTLMSAHENISPNIQQ 420
           KLGRSSNSQTGEATMAHSCHKPPVKSSRSMSKNVQGKARSTSLQTLMSAHENISPNIQQ
Sbjct: 361 KLGRSSNSQTGEATMAHSCHKPPVKSSRSMSKNVQGKARSTSLQTLMSAHENISPNIQQ 419

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BLAST of Carg04486-RA vs. NCBI nr
Match: XP_022954996.1 (protein WVD2-like 7 [Cucurbita moschata] >KAG6602390.1 Protein WVD2-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 758.8 bits (1958), Expect = 2.4e-215
Identity = 408/452 (90.27%), Postives = 408/452 (90.27%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT
Sbjct: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120

Query: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180
           ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS
Sbjct: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180

Query: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240
           KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL
Sbjct: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240

Query: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300
           NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM     ALKNEYQNHPSATPCSETK
Sbjct: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM-----ALKNEYQNHPSATPCSETK 300

Query: 301 RNKLYSPFSFSTFSLRTDERAARRKE---------------------------------A 360
           RNKLYSPFSFSTFSLRTDERAARRKE                                  
Sbjct: 301 RNKLYSPFSFSTFSLRTDERAARRKEKLEEKFNKNESHKKVQLQTKLKEKAETEITKLRQ 360

Query: 361 SFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420
           SF C    PLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS
Sbjct: 361 SF-CFKARPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420

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BLAST of Carg04486-RA vs. NCBI nr
Match: XP_023518127.1 (protein WVD2-like 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 739.6 bits (1908), Expect = 1.5e-209
Identity = 399/455 (87.69%), Postives = 404/455 (88.79%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRP HGL QSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPIHGLVQSVSFGRFMSESLDWEKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQR---AAAAAAKAAEETDTKQNVDDVEHQEVV 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQR   AAAAAAKAAEETDTKQNVDDVEHQEVV
Sbjct: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAAAAKAAEETDTKQNVDDVEHQEVV 120

Query: 121 AATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQST 180
           AATETAQHFA NDNG+GCGDPSDLKEE+TDSREVEGGGSAITHQVNEGIR+KVENLEQST
Sbjct: 121 AATETAQHFATNDNGNGCGDPSDLKEEKTDSREVEGGGSAITHQVNEGIRQKVENLEQST 180

Query: 181 TISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPI 240
           TISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPI
Sbjct: 181 TISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPI 240

Query: 241 RELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCS 300
           RELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM     ALKNEYQNHPSATPCS
Sbjct: 241 RELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM-----ALKNEYQNHPSATPCS 300

Query: 301 ETKRNKLYSPFSFSTFSLRTDERAARRKE------------------------------- 360
           ETKRNKLYSPFSFSTFSLRTDERAARRKE                               
Sbjct: 301 ETKRNKLYSPFSFSTFSLRTDERAARRKEKLEEKFNKNESQKKVQLQTKLKEKAETEITK 360

Query: 361 --ASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPV 420
              SF C    PLPSFYKERKAHKNEEVPKPHPPSPKLGR+SNSQTGEATMAHSCHKPP 
Sbjct: 361 LRQSF-CFKARPLPSFYKERKAHKNEEVPKPHPPSPKLGRNSNSQTGEATMAHSCHKPPA 420

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BLAST of Carg04486-RA vs. NCBI nr
Match: XP_022991151.1 (protein WVD2-like 7 [Cucurbita maxima])

HSP 1 Score: 720.7 bits (1859), Expect = 7.3e-204
Identity = 391/452 (86.50%), Postives = 398/452 (88.05%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 78  MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 137

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT
Sbjct: 138 EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 197

Query: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180
           ETAQHFA NDNG+GCGDPSDLKEE+TDSREVEG  SAI HQV+E IR+KVENLEQSTTIS
Sbjct: 198 ETAQHFAVNDNGNGCGDPSDLKEEKTDSREVEGAVSAIPHQVSEEIRQKVENLEQSTTIS 257

Query: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240
           KKKVAASSSKLPFFSRSSAI PTTPA PMAPASSLNNATPKRKSTPKSLRMANFTPIRE+
Sbjct: 258 KKKVAASSSKLPFFSRSSAIRPTTPAQPMAPASSLNNATPKRKSTPKSLRMANFTPIREI 317

Query: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300
           NKLTSTVMRKIERSRVGSSSSKPAKD STPLRTPDM     ALKNEYQN PSATPCSETK
Sbjct: 318 NKLTSTVMRKIERSRVGSSSSKPAKDSSTPLRTPDM-----ALKNEYQNPPSATPCSETK 377

Query: 301 RNKLYSPFSFSTFSLRTDERAARRKE---------------------------------A 360
           RNKLYSPFSFSTFSLRTDERAARRKE                                  
Sbjct: 378 RNKLYSPFSFSTFSLRTDERAARRKEKLEEKFNKNESQKNVQLQTKLKEKAETEITKLRQ 437

Query: 361 SFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420
           SF C    PLPSFYKERKAHKNEEVPKPHPPSPKLGR+SNSQTGEATMAHSCHKPP KSS
Sbjct: 438 SF-CFKARPLPSFYKERKAHKNEEVPKPHPPSPKLGRNSNSQTGEATMAHSCHKPPAKSS 497

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BLAST of Carg04486-RA vs. NCBI nr
Match: XP_038890911.1 (protein WVD2-like 7 [Benincasa hispida])

HSP 1 Score: 473.4 bits (1217), Expect = 2.0e-129
Identity = 316/612 (51.63%), Postives = 346/612 (56.54%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTC+MQHPFSYTSGFPNESMEGN P H L+QSVSFGRF SESL WEKWSTFSHNRYV
Sbjct: 1   MADSTCLMQHPFSYTSGFPNESMEGNLPIHALSQSVSFGRFTSESLAWEKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRA--------AAAAAKAAEETDTKQNVDDVE 120
           EEAEKF+RPGSVAQKKAFFEAHYK +AAQRA        AA+++K+ EET+TKQNV DV 
Sbjct: 61  EEAEKFSRPGSVAQKKAFFEAHYKKVAAQRAAALLEQENAASSSKSTEETETKQNVSDVG 120

Query: 121 H--------------QEVVAATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAI 180
                          Q+      T Q F A  +GD   + SDL+EER  SREVEGG S +
Sbjct: 121 RSASLRTAMPTSDAVQQHGVEVVTGQDFVAIASGDDSCNGSDLREERVGSREVEGGDSGV 180

Query: 181 THQVNEGIRRKVE--------------------------------NLEQSTTISKKKVAA 240
            HQV E + +KVE                                  EQ +TISKKK A 
Sbjct: 181 AHQVIEEVPQKVELKVMVDLNDGLTENEFNRTPQMEKSLPKSSRQTWEQPSTISKKKAAT 240

Query: 241 SS---SKLPFFSRSSAIPPTTPAHPMAPASSLNNATP----------------------- 300
           SS   SKL  F RSS I P+TPA P+APAS LNNATP                       
Sbjct: 241 SSSKDSKLSLFDRSSKILPSTPAKPIAPASCLNNATPKQVANKYVMESVDKRKSNNATPK 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 QVANKYAMESADKRKSDNATPKQVANKHVMESADKRKSDNATPKQVANQYVMESADKRKS 360

Query: 361 ------------------KRKSTPKSLRMA-NFTPIRELNKLTSTVMRKIERSRVGSSSS 420
                             KRKSTPKSLRMA NFTPIRELNKLTSTVMRKIERSR GSS+S
Sbjct: 361 NNATPKQVANKYVMESADKRKSTPKSLRMAVNFTPIRELNKLTSTVMRKIERSRAGSSTS 420

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BLAST of Carg04486-RA vs. ExPASy Swiss-Prot
Match: Q67Y69 (Protein WVD2-like 7 OS=Arabidopsis thaliana OX=3702 GN=WDL7 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.1e-12
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 8   MQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYVEEAEKFA 67
           +Q PFS        S +GN    G   S+SFGRF  E L WEK S+FSHNRY+EE +K +
Sbjct: 5   IQDPFSL-------SFQGNSIHSG---SISFGRFEKEGLSWEKRSSFSHNRYLEEVDKCS 64

Query: 68  RPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAATETAQHFA 127
           +PGSV + KA FEAH+K    +  A+  ++      T    DD    E V ATE+ + + 
Sbjct: 65  KPGSVTEMKAHFEAHFKKKGIRFPASLESQTWGVHQTSNEPDD----EAVHATESFEDYR 112

Query: 128 AN 130
           ++
Sbjct: 125 SD 112

[Close]

BLAST of Carg04486-RA vs. ExPASy TrEMBL
Match: A0A6J1GSH3 (protein WVD2-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111457083 PE=3 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.2e-215
Identity = 408/452 (90.27%), Postives = 408/452 (90.27%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT
Sbjct: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120

Query: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180
           ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS
Sbjct: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180

Query: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240
           KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL
Sbjct: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240

Query: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300
           NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM     ALKNEYQNHPSATPCSETK
Sbjct: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDM-----ALKNEYQNHPSATPCSETK 300

Query: 301 RNKLYSPFSFSTFSLRTDERAARRKE---------------------------------A 360
           RNKLYSPFSFSTFSLRTDERAARRKE                                  
Sbjct: 301 RNKLYSPFSFSTFSLRTDERAARRKEKLEEKFNKNESHKKVQLQTKLKEKAETEITKLRQ 360

Query: 361 SFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420
           SF C    PLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS
Sbjct: 361 SF-CFKARPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420

[Close]

BLAST of Carg04486-RA vs. ExPASy TrEMBL
Match: A0A6J1JPY0 (protein WVD2-like 7 OS=Cucurbita maxima OX=3661 GN=LOC111487836 PE=3 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.5e-204
Identity = 391/452 (86.50%), Postives = 398/452 (88.05%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV
Sbjct: 78  MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 137

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 120
           EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT
Sbjct: 138 EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAAT 197

Query: 121 ETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQSTTIS 180
           ETAQHFA NDNG+GCGDPSDLKEE+TDSREVEG  SAI HQV+E IR+KVENLEQSTTIS
Sbjct: 198 ETAQHFAVNDNGNGCGDPSDLKEEKTDSREVEGAVSAIPHQVSEEIRQKVENLEQSTTIS 257

Query: 181 KKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIREL 240
           KKKVAASSSKLPFFSRSSAI PTTPA PMAPASSLNNATPKRKSTPKSLRMANFTPIRE+
Sbjct: 258 KKKVAASSSKLPFFSRSSAIRPTTPAQPMAPASSLNNATPKRKSTPKSLRMANFTPIREI 317

Query: 241 NKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETK 300
           NKLTSTVMRKIERSRVGSSSSKPAKD STPLRTPDM     ALKNEYQN PSATPCSETK
Sbjct: 318 NKLTSTVMRKIERSRVGSSSSKPAKDSSTPLRTPDM-----ALKNEYQNPPSATPCSETK 377

Query: 301 RNKLYSPFSFSTFSLRTDERAARRKE---------------------------------A 360
           RNKLYSPFSFSTFSLRTDERAARRKE                                  
Sbjct: 378 RNKLYSPFSFSTFSLRTDERAARRKEKLEEKFNKNESQKNVQLQTKLKEKAETEITKLRQ 437

Query: 361 SFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRSSNSQTGEATMAHSCHKPPVKSS 420
           SF C    PLPSFYKERKAHKNEEVPKPHPPSPKLGR+SNSQTGEATMAHSCHKPP KSS
Sbjct: 438 SF-CFKARPLPSFYKERKAHKNEEVPKPHPPSPKLGRNSNSQTGEATMAHSCHKPPAKSS 497

[Close]

BLAST of Carg04486-RA vs. ExPASy TrEMBL
Match: A0A1S3C8D6 (protein WVD2-like 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498138 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 4.9e-129
Identity = 307/578 (53.11%), Postives = 336/578 (58.13%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNR-PTHGLAQSVSFGRFMSESLDWEKWSTFSHNRY 60
           MADSTC+M HPFSYTSGFPNESMEGN  P H L+QSVSFGRFMSESL WEKWSTFSHNRY
Sbjct: 1   MADSTCLMHHPFSYTSGFPNESMEGNNLPIHALSQSVSFGRFMSESLSWEKWSTFSHNRY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRA--------AAAAAKAAEETDTKQNVDDV 120
           VEEAEKF+RPGSVAQKKAFFEAHYK +AAQRA        AAA++K+ E+T+TKQN    
Sbjct: 61  VEEAEKFSRPGSVAQKKAFFEAHYKKIAAQRAAALLEQENAAASSKSLEQTETKQNGSAS 120

Query: 121 EH---------QEVVAATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQV 180
                      Q+      T Q F    NG+G  D S LKEE+ DSREVEGG S + HQV
Sbjct: 121 PQTSMSTSNGVQQYGVEVVTGQDFVTIANGNGSSDGSLLKEEKLDSREVEGGDSGLAHQV 180

Query: 181 NEGIRRKV-----------------------------ENLEQSTTISKKKVAASSSKLPF 240
            E I +KV                             +N EQ +TISKKK A SSSKL  
Sbjct: 181 IEEITQKVVGVDLNDGLTGNEFNRTPQMEISLPKSSRQNWEQPSTISKKKAATSSSKLLL 240

Query: 241 FSRSSAIPPTTPAHPMAPASSLNNATP--------------------------------- 300
           F RSS I P+TP  P++PAS LNNATP                                 
Sbjct: 241 FDRSSKILPSTPVKPISPASCLNNATPKQVANKYSMESADKRKSNIATPKRVANKYVMES 300

Query: 301 ----------------------------------------------KRKSTPKSLRMA-N 360
                                                         KRKSTPKSLRMA N
Sbjct: 301 ADKRKSNIATPKQAANKYVMESADKRKSNIATPKQVVNKCVTESADKRKSTPKSLRMAVN 360

Query: 361 FTPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSA 419
           FTPIRELNKLTSTVMRKIERSRVG+S+SKPAKDCSTPLRTP+      A+KNE Q HPSA
Sbjct: 361 FTPIRELNKLTSTVMRKIERSRVGASTSKPAKDCSTPLRTPNT-----AMKNESQKHPSA 420

[Close]

BLAST of Carg04486-RA vs. ExPASy TrEMBL
Match: A0A5A7T2E2 (Protein WVD2-like 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00160 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.1e-128
Identity = 306/578 (52.94%), Postives = 336/578 (58.13%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNR-PTHGLAQSVSFGRFMSESLDWEKWSTFSHNRY 60
           MADSTC+M HPFSYTSGFPNESMEGN  P H L+QSVSFGRFMSESL WEKWSTFSHNRY
Sbjct: 1   MADSTCLMHHPFSYTSGFPNESMEGNNLPIHALSQSVSFGRFMSESLSWEKWSTFSHNRY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRA--------AAAAAKAAEETDTKQNVDDV 120
           VEEAEKF+RPGSVAQKKAFFEAHYK +AAQRA        AA+++K+ E+T+TKQN    
Sbjct: 61  VEEAEKFSRPGSVAQKKAFFEAHYKKIAAQRAAALLEQENAASSSKSLEQTETKQNGSAS 120

Query: 121 EH---------QEVVAATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQV 180
                      Q+      T Q F    NG+G  D S LKEE+ DSREVEGG S + HQV
Sbjct: 121 PQTSMSTSNGVQQYGVEVVTGQDFVTIANGNGSSDGSLLKEEKLDSREVEGGDSGLAHQV 180

Query: 181 NEGIRRKV-----------------------------ENLEQSTTISKKKVAASSSKLPF 240
            E I +KV                             +N EQ +TISKKK A SSSKL  
Sbjct: 181 IEEITQKVVGVDLNDGLTGNEFNRTPQMEISLPKSSRQNWEQPSTISKKKAATSSSKLLL 240

Query: 241 FSRSSAIPPTTPAHPMAPASSLNNATP--------------------------------- 300
           F RSS I P+TP  P++PAS LNNATP                                 
Sbjct: 241 FDRSSKILPSTPVKPISPASCLNNATPKQVANKYSMESADKRKSNIATPKRVANKSVMES 300

Query: 301 ----------------------------------------------KRKSTPKSLRMA-N 360
                                                         KRKSTPKSLRMA N
Sbjct: 301 ADKRKSNIATPKQAANKYVMESADKRKSNIATPKQVVNKCVTESADKRKSTPKSLRMAVN 360

Query: 361 FTPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSA 419
           FTPIRELNKLTSTVMRKIERSRVG+S+SKPAKDCSTPLRTP+      A+KNE Q HPSA
Sbjct: 361 FTPIRELNKLTSTVMRKIERSRVGASTSKPAKDCSTPLRTPNT-----AMKNESQKHPSA 420

[Close]

BLAST of Carg04486-RA vs. ExPASy TrEMBL
Match: A0A6J1FMY6 (protein WVD2-like 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445659 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 5.4e-128
Identity = 287/497 (57.75%), Postives = 326/497 (65.59%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRYV 60
           MADSTC++QHPFSYTSGFPNESMEGN P H L QSVSFGRFMSESL W+KWSTFSHNRYV
Sbjct: 1   MADSTCLIQHPFSYTSGFPNESMEGNHPIHALGQSVSFGRFMSESLAWDKWSTFSHNRYV 60

Query: 61  EEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAK--AAEETDTKQNVDDVEHQEVVA 120
           EEAEKF+RPGSVAQKKAFFEAHYK +AAQRAAA   +  AA  +++ Q  + V+     A
Sbjct: 61  EEAEKFSRPGSVAQKKAFFEAHYKKIAAQRAAALLEQENAAASSNSVQQTETVDDVGACA 120

Query: 121 ATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVE------- 180
           + +TA   +A     G  D SD KEE+  SREVEG  S I HQV + I +KVE       
Sbjct: 121 SLQTAMPSSAGVEQHGSCDGSDPKEEKVGSREVEGVDSGIAHQVFDEIPQKVEPKVKVEG 180

Query: 181 ----------------------------NLEQSTTISKKKVAASSSKLPFFSRSSAIPPT 240
                                       NLE  +TISKKK A S  KLP F+RSS I P+
Sbjct: 181 VDLNGGLTEVELTRTPQMEKSLPKSSRQNLEHPSTISKKKAATSYPKLPLFNRSSKI-PS 240

Query: 241 TPAHPMAPASS--------LNNATPKRKSTPKSLRMA-NFTPIRELNKLTSTVMRKIERS 300
           TPA P+APAS+        +  +  KRKSTPKSLRMA NFTPIRELNKLTSTV+RKIERS
Sbjct: 241 TPAKPIAPASTPKQVANKHVMESADKRKSTPKSLRMAVNFTPIRELNKLTSTVIRKIERS 300

Query: 301 RVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSATPCSETKRNKLYSPFSFSTFS 360
           RVGS++SKPAKDCSTPLRTP+      ALKN    HPS TP SE KRNK YSPFSF+ FS
Sbjct: 301 RVGSNTSKPAKDCSTPLRTPNT-----ALKNVPHKHPSTTPWSEKKRNKSYSPFSFTPFS 360

Query: 361 LRTDERAARRKEA--------------------------------SFCCILLMPLPSFYK 420
           LRT+ERAARRKE                                    C    PLP+FY+
Sbjct: 361 LRTEERAARRKEKLEEKFNTNESQKKVQLQTKLKEKTETEVIKLHQSSCFKARPLPNFYR 420

[Close]

BLAST of Carg04486-RA vs. TAIR 10
Match: AT3G01710.2 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-31
Identity = 125/350 (35.71%), Postives = 166/350 (47.43%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFS-HNRY 60
           M +S C+MQ PFSY +  P     G      L QSVSFGRFMSE LDWEKWS FS  N Y
Sbjct: 1   MGESACLMQ-PFSYAA--PQGDSLG-----ALGQSVSFGRFMSEKLDWEKWSAFSTQNPY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAA--AAKAAEETDTKQNVDDVEHQEVV 120
           V EAE++++PGSVAQKKAFFEAHYK +AA R AAA  A    ++    Q       +E +
Sbjct: 61  VAEAERYSKPGSVAQKKAFFEAHYKKVAAARKAAAEEALLLQQQIPKPQPEKSPVQEEDI 120

Query: 121 AATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQST 180
              E      +  + +      D+  +     E EG  S       E        +   T
Sbjct: 121 NEGEKKDWMVSKPDLEIPRGSLDVSAQLKLLAEKEGRFSNRQSDEKENCGMAESEINGRT 180

Query: 181 T---ISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANF 240
               + ++K    S K     +S    P +   P     + +  TP +KS  KS     F
Sbjct: 181 AEEQVDEEKPILKSVK----KKSKDSQPKSSTKPRVSKYNSSERTPSKKSNNKS-SSYTF 240

Query: 241 TPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSAT 300
           TP +E N+L S ++RKI+ SR   +SSKP KDC TPLRTP    +   +  +      +T
Sbjct: 241 TPAKEFNRLVS-IIRKIDGSR---ASSKPTKDCKTPLRTPSNKVSAKGMVED----SLST 300

Query: 301 PCSETKRNKL------------------YSPFSFSTFSLRTDERAARRKE 327
           P S   R K+                   +P  F+ F LRT+ERA RRK+
Sbjct: 301 PLSSNTRGKIAPNSSAKTGRGRWNFLPAETPSCFTPFGLRTEERAERRKK 329

[Close]

BLAST of Carg04486-RA vs. TAIR 10
Match: AT3G01710.1 (TPX2 (targeting protein for Xklp2) protein family )

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-31
Identity = 124/349 (35.53%), Postives = 167/349 (47.85%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTSGFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFS-HNRY 60
           M +S C+MQ PFSY +  P     G      L QSVSFGRFMSE LDWEKWS FS  N Y
Sbjct: 1   MGESACLMQ-PFSYAA--PQGDSLG-----ALGQSVSFGRFMSEKLDWEKWSAFSTQNPY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAA--AAKAAEETDTKQNVDDVEHQEVV 120
           V EAE++++PGSVAQKKAFFEAHYK +AA R AAA  A    ++    Q       +E +
Sbjct: 61  VAEAERYSKPGSVAQKKAFFEAHYKKVAAARKAAAEEALLLQQQIPKPQPEKSPVQEEDI 120

Query: 121 AATETAQHFAANDNGDGCGDPSDLKEERTDSREVEGGGSAITHQVNEGIRRKVENLEQST 180
              E      +  + +      D+  +     E EG  S       E        +   T
Sbjct: 121 NEGEKKDWMVSKPDLEIPRGSLDVSAQLKLLAEKEGRFSNRQSDEKENCGMAESEINGRT 180

Query: 181 T---ISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANF 240
               + ++K    S K     +S    P +   P     + +  TP +KS  KS     F
Sbjct: 181 AEEQVDEEKPILKSVK----KKSKDSQPKSSTKPRVSKYNSSERTPSKKSNNKS-SSYTF 240

Query: 241 TPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMVATLFALKNEYQNHPSAT 300
           TP +E N+L S ++RKI+ SR   +SSKP KDC TPLRTP    +   +  +  + P ++
Sbjct: 241 TPAKEFNRLVS-IIRKIDGSR---ASSKPTKDCKTPLRTPSNKVSAKGMVEDSLSTPLSS 300

Query: 301 ----------PCSETKRNK-------LYSPFSFSTFSLRTDERAARRKE 327
                     P S  K  +         +P  F+ F LRT+ERA RRK+
Sbjct: 301 NTSKCRGKIAPNSSAKTGRGRWNFLPAETPSCFTPFGLRTEERAERRKK 332

[Close]

BLAST of Carg04486-RA vs. TAIR 10
Match: AT5G40700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-22
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTS-GFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRY 60
           MA+S  ++ H +S+ +    NES E N   H L+QSVSFGRFM+E+L+W KWS+FSH +Y
Sbjct: 1   MAES-AVLFHSYSFAAPPSRNESHEDN-TMHALSQSVSFGRFMTENLEWGKWSSFSHKKY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAA 120
           V+EAEKF++PGSVAQKKAFFEAHYK +A  + A A+ +++ ++D KQ     E + V   
Sbjct: 61  VDEAEKFSQPGSVAQKKAFFEAHYKKIAEAKKAKASDQSS-DSDPKQ-----EPESVAVL 120

Query: 121 TETAQHFAANDNGDGCGDPSDL 142
             T +    ++  +  GD ++L
Sbjct: 121 LNTLETLTKDEVKEEEGDETEL 134

[Close]

BLAST of Carg04486-RA vs. TAIR 10
Match: AT5G40700.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 475 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 43; Metazoa - 127; Fungi - 17; Plants - 143; Viruses - 7; Other Eukaryotes - 138 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-22
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTS-GFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRY 60
           MA+S  ++ H +S+ +    NES E N   H L+QSVSFGRFM+E+L+W KWS+FSH +Y
Sbjct: 1   MAES-AVLFHSYSFAAPPSRNESHEDN-TMHALSQSVSFGRFMTENLEWGKWSSFSHKKY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAA 120
           V+EAEKF++PGSVAQKKAFFEAHYK +A  + A A+ +++ ++D KQ     E + V   
Sbjct: 61  VDEAEKFSQPGSVAQKKAFFEAHYKKIAEAKKAKASDQSS-DSDPKQ-----EPESVAVL 120

Query: 121 TETAQHFAANDNGDGCGDPSDL 142
             T +    ++  +  GD ++L
Sbjct: 121 LNTLETLTKDEVKEEEGDETEL 134

[Close]

BLAST of Carg04486-RA vs. TAIR 10
Match: AT5G40700.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-22
Identity = 65/142 (45.77%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 1   MADSTCIMQHPFSYTS-GFPNESMEGNRPTHGLAQSVSFGRFMSESLDWEKWSTFSHNRY 60
           MA+S  ++ H +S+ +    NES E N   H L+QSVSFGRFM+E+L+W KWS+FSH +Y
Sbjct: 1   MAES-AVLFHSYSFAAPPSRNESHEDN-TMHALSQSVSFGRFMTENLEWGKWSSFSHKKY 60

Query: 61  VEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAKAAEETDTKQNVDDVEHQEVVAA 120
           V+EAEKF++PGSVAQKKAFFEAHYK +A  + A A+ +++ ++D KQ     E + V   
Sbjct: 61  VDEAEKFSQPGSVAQKKAFFEAHYKKIAEAKKAKASDQSS-DSDPKQ-----EPESVAVL 120

Query: 121 TETAQHFAANDNGDGCGDPSDL 142
             T +    ++  +  GD ++L
Sbjct: 121 LNTLETLTKDEVKEEEGDETEL 134

The following BLAST results are available for this feature:

BLAST of Carg04486-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033067.1	1.6e-230	100.00	Protein WVD2-like 7 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954996.1	2.4e-215	90.27	protein WVD2-like 7 [Cucurbita moschata] >KAG6602390.1 Protein WVD2-like 4, part...	[more]
XP_023518127.1	1.5e-209	87.69	protein WVD2-like 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022991151.1	7.3e-204	86.50	protein WVD2-like 7 [Cucurbita maxima]	[more]
XP_038890911.1	2.0e-129	51.63	protein WVD2-like 7 [Benincasa hispida]	[more]

BLAST of Carg04486-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67Y69	6.1e-12	40.16	Protein WVD2-like 7 OS=Arabidopsis thaliana OX=3702 GN=WDL7 PE=2 SV=1	[more]

BLAST of Carg04486-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSH3	1.2e-215	90.27	protein WVD2-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111457083 PE=3 SV=1	[more]
A0A6J1JPY0	3.5e-204	86.50	protein WVD2-like 7 OS=Cucurbita maxima OX=3661 GN=LOC111487836 PE=3 SV=1	[more]
A0A1S3C8D6	4.9e-129	53.11	protein WVD2-like 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498138 PE=3 SV=1	[more]
A0A5A7T2E2	1.1e-128	52.94	Protein WVD2-like 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1FMY6	5.4e-128	57.75	protein WVD2-like 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445659 PE=...	[more]

BLAST of Carg04486-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01710.2	2.7e-31	35.71	TPX2 (targeting protein for Xklp2) protein family	[more]
AT3G01710.1	6.1e-31	35.53	TPX2 (targeting protein for Xklp2) protein family	[more]
AT5G40700.1	1.4e-22	45.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G40700.2	1.4e-22	45.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G40700.3	1.4e-22	45.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..271
None	No IPR available	PANTHER	PTHR47067:SF7	TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY	coord: 1..411
IPR044216	Protein WVD2-like 7	PANTHER	PTHR47067	TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED	coord: 1..411

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04486	Carg04486	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04486-RA:1	Carg04486-RA:1	exon
Carg04486-RA:2	Carg04486-RA:2	exon
Carg04486-RA:3	Carg04486-RA:3	exon
Carg04486-RA:4	Carg04486-RA:4	exon
Carg04486-RA:5	Carg04486-RA:5	exon
Carg04486-RA:6	Carg04486-RA:6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04486-RA:five_prime_utr	Carg04486-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04486-RA:cds	Carg04486-RA:cds	CDS
Carg04486-RA:cds	Carg04486-RA:cds_2	CDS
Carg04486-RA:cds	Carg04486-RA:cds_3	CDS
Carg04486-RA:cds	Carg04486-RA:cds_4	CDS
Carg04486-RA:cds	Carg04486-RA:cds_5	CDS
Carg04486-RA:cds	Carg04486-RA:cds_6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04486-RA	Carg04486-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule