Carg03757-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03757-RA
TypemRNA
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmembrane magnesium transporter-like
LocationCarg_Chr14: 937088 .. 938990 (+)
Sequence length936
RNA-Seq ExpressionCarg03757-RA
SyntenyCarg03757-RA
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCCCGTTCGACTTGTAGTCCATATTTTAATATTTTATCAATTTAAATCCTATTTTTGTCTCTTTTCCTTTTTTTTATTTTTTAAATATCCCATTAGTATCAACGGAAGCAGGGGAGGTGATTGGAATTCCATAGATCAAGTCAAGCAAAACCTCTGCCGGCATCTGTAGCTTCCGCCGTCCGGTGGTCGAGATGGGAGTGTGCTTCGTGGTCGGCGTATTGGGAGTTCTAATCCTAGCTCATGCTGCTTATTCCACCATCCAATGTATGCCCTAAAAAATCCCCTGATTATATTCTCTAATTGTAAACCCTGCAGTTCTCGATTGACCTTGTTTTGAATGCAGATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTATTCTCGCCACTCTTTTTTTATTTCTTTAATTTTGGCTTTCAGTTGGTTCCGCTTATATCACTCGATTTGAGGTGTTTCTGAAATAAGGAAACTTTTCTTGTCCCCTAATTTTAGGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACCGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCCGAGGAGAATAGGTACATTTTCCTGTCAATTTGTGCATGAAATGTGATTTTGCTAAATGTTTTGGATGGAATTCCGCCATTAGTTTTTCGTTTTCCCCATCGATACGATATTACAATGATAAGGCTTTGGTGTTGACGATTGTAGACCGTTTGCCAATCCAGAAAAGCTAGGCTCTGGTAGTAAAACTCCGGTAAAGGTTATCACAAATATAACCTTTGTTACCAGCTCAGTCTATCCACTTCCACCTCCCTCTACCCTCTCCCCCTGTGTCTGCCAATTTACTGCCTTGCCTTCTTTTGCTTCAAAGTTCATATAAGAAGTGCAAAGGCATTTAGTTTCCTAGAATCTGGTAGTTATTTTTGTTTTCTTAAAAGGTTCTACTAAGCCGCTCTTAAATGTCTGAAGAGATAGAGATGAACCCATTAGAAAGTTTTAGAGAATTTCTTTGTGAGATCCCACGTCGGTCGGAGAGGGGAACGAAGCATTCTTGATAAAGGTGTGGAAACCTCCCCCTTGCAAACACGTTTTAAAAACTTTAAAAGGAAGCTCGAAAGAGAAAGTCCAAAGAGGATAATATTTGCTAGCGGTGAGCTGGCTGTTACATTCTCTTTTTGGATTGTCCCCTATATTTCCATGGTCCGTCCCTTCAATTCGAGTTTTGTTCAAGTTCAGAATATTTCAAGAATTTGTTGTTGTTACAACTAATTTCACTGTTATTAGCATATTGTTTCGTCCAGCAAGTTAAAACTATTCTTCATGTAGAGAAATATTTTACATTGCAGGGTAGTTCTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGAGATCTCAGTCGTGATTAGAGTAGGCACTGGAGAATTCAAGCTGGAAGCAGGAATGGACGTTAAAGAACCTTAAGGAGATATTGCTGCATTCCATCAATCTAATGTTTCTTCACTCGCTAATTATTTTGGATACTGCGAGGTTTTTTCCATGTTTATTTTATAGTCTCTTCCTCAAAACAAGGTTTTGCCATTGTTATTGAATTAGGCGTCTTTTGGATCGATATGAAAGGTTAGTATGTGTTTCTGCAATCTGGTTAACTGAGATTAGTTTGTTTTTTCATCTGCCAATGGTAAATGGTTTCAATTTGGTAGCTTATTTCTCTGCTGTGTACGATCCATTGTTATTGAATTAGGCCTCTTTTAGATGTGTGGAAATGACTTGGGGTTCTTGTTTTAAAATGAATTTTGTATTCTGATGCAA

mRNA sequence

AATTCCCGTTCGACTTGTAGTCCATATTTTAATATTTTATCAATTTAAATCCTATTTTTGTCTCTTTTCCTTTTTTTTATTTTTTAAATATCCCATTAGTATCAACGGAAGCAGGGGAGGTGATTGGAATTCCATAGATCAAGTCAAGCAAAACCTCTGCCGGCATCTGTAGCTTCCGCCGTCCGGTGGTCGAGATGGGAGTGTGCTTCGTGGTCGGCGTATTGGGAGTTCTAATCCTAGCTCATGCTGCTTATTCCACCATCCAATATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACCGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCCGAGGAGAATAGGGTAGTTCTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGAGATCTCAGTCGTGATTAGAGTAGGCACTGGAGAATTCAAGCTGGAAGCAGGAATGGACGTTAAAGAACCTTAAGGAGATATTGCTGCATTCCATCAATCTAATGTTTCTTCACTCGCTAATTATTTTGGATACTGCGAGGTTTTTTCCATGTTTATTTTATAGTCTCTTCCTCAAAACAAGGTTTTGCCATTGTTATTGAATTAGGCGTCTTTTGGATCGATATGAAAGGTTAGTATGTGTTTCTGCAATCTGGTTAACTGAGATTAGTTTGTTTTTTCATCTGCCAATGGTAAATGGTTTCAATTTGGTAGCTTATTTCTCTGCTGTGTACGATCCATTGTTATTGAATTAGGCCTCTTTTAGATGTGTGGAAATGACTTGGGGTTCTTGTTTTAAAATGAATTTTGTATTCTGATGCAA

Coding sequence (CDS)

ATGGGAGTGTGCTTCGTGGTCGGCGTATTGGGAGTTCTAATCCTAGCTCATGCTGCTTATTCCACCATCCAATATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACCGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCCGAGGAGAATAGGGTAGTTCTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGA

Protein sequence

MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH
Homology
[Close]
BLAST of Carg03757-RA vs. NCBI nr
Match: XP_022934760.1 (membrane magnesium transporter-like [Cucurbita moschata] >KAG7017371.1 Membrane magnesium transporter [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT
Sbjct: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. NCBI nr
Match: KAG6580614.1 (Membrane magnesium transporter, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT
Sbjct: 59  MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 118

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 119 VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 164

[Close]
BLAST of Carg03757-RA vs. NCBI nr
Match: XP_022983163.1 (membrane magnesium transporter-like [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MG CFVVG+LGVLILAHA+YSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT
Sbjct: 1   MGGCFVVGILGVLILAHASYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINPESEENRVV LPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 61  VPGKFRSINPESEENRVVFLPANQDFMVFNHRGKLFPQKTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. NCBI nr
Match: XP_023529052.1 (membrane magnesium transporter-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-49
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGV FVVGVLG+LILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWA LT
Sbjct: 1   MGVSFVVGVLGILILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWATLT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINP+SEENRVV LPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 61  VPGKFRSINPQSEENRVVFLPANQDFMVFNHRGKLFPQKTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. NCBI nr
Match: XP_038903501.1 (membrane magnesium transporter [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 4.3e-44
Identity = 91/106 (85.85%), Postives = 101/106 (95.28%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGV FVVGV GVLILAHAAYSTIQYR++LKIMQEEFSGPPF+VAIEL LGLVLS+WAALT
Sbjct: 1   MGVGFVVGVFGVLILAHAAYSTIQYRSLLKIMQEEFSGPPFHVAIELILGLVLSMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKF SINPE+EENR+V LPANQDFM+FNHRG+LFP++TDLKLKH
Sbjct: 61  VPGKFHSINPEAEENRIVSLPANQDFMIFNHRGRLFPKQTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match: Q2HIM5 (Membrane magnesium transporter OS=Arabidopsis thaliana OX=3702 GN=At5g03345 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           M + F+VGV GVLIL+HAAYSTIQYR +LKIM+EEFS PP NV +EL +GL L +WAALT
Sbjct: 1   MNLGFLVGVFGVLILSHAAYSTIQYRGLLKIMEEEFSRPPINVILELIIGLALCMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLK 104
            PGKF SI+P+S+ENR V LP N DFM+FNHRG+LFP + D+K
Sbjct: 61  FPGKFLSIHPDSDENRAVFLPDNSDFMIFNHRGRLFPPQIDMK 103

[Close]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match: Q8N4V1 (ER membrane protein complex subunit 5 OS=Homo sapiens OX=9606 GN=MMGT1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-07
Identity = 26/94 (27.66%), Postives = 56/94 (59.57%), Query Frame = 0 

Query: 10  LGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKFRSIN 69
           +G+  LAHAA+S  Q+R+ +++ ++E    P ++ ++  L   ++ +  + + G+F+ ++
Sbjct: 12  IGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEFKDMD 71

Query: 70  PESE-ENRVV-LLPANQDFMVFNHRGKLFPQKTD 102
             SE +N+    L  +  F VFNHRG++  + +D
Sbjct: 72  ATSELKNKTFDTLRNHPSFYVFNHRGRVLFRPSD 105

[Close]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match: Q8K273 (ER membrane protein complex subunit 5 OS=Mus musculus OX=10090 GN=Mmgt1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-07
Identity = 29/98 (29.59%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 6   VVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKF 65
           +VGV G+  LAHAA+S  Q+R+ +++ ++E    P ++ ++  L   ++ +  + + G+F
Sbjct: 9   LVGV-GLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEF 68

Query: 66  RSINPESE-ENRVV-LLPANQDFMVFNHRGKLFPQKTD 102
           + ++  SE +N+    L  +  F VFNHRG++  + +D
Sbjct: 69  KDMDATSELKNKTFDTLRNHPSFYVFNHRGRVLFRPSD 105

[Close]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match: B5DF51 (ER membrane protein complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Mmgt1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-07
Identity = 29/98 (29.59%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 6   VVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKF 65
           +VGV G+  LAHAA+S  Q+R+ +++ ++E    P ++ ++  L   ++ +  + + G+F
Sbjct: 9   LVGV-GLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEF 68

Query: 66  RSINPESE-ENRVV-LLPANQDFMVFNHRGKLFPQKTD 102
           + ++  SE +N+    L  +  F VFNHRG++  + +D
Sbjct: 69  KDMDATSELKNKTFDTLRNHPSFYVFNHRGRVLFRPSD 105

[Close]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match: Q6TLE4 (ER membrane protein complex subunit 5 OS=Danio rerio OX=7955 GN=mmgt1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07
Identity = 28/92 (30.43%), Postives = 57/92 (61.96%), Query Frame = 0 

Query: 6  VVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKF 65
          VVG+ G+  LAHAA+S  Q+R+ +++ ++E    P ++ ++  L  V++ +  + + G+F
Sbjct: 9  VVGI-GLFALAHAAFSAAQHRSYMRLTEKENETLPIDIVLQTLLSFVITCYGIVHISGEF 68

Query: 66 RSINPESE-ENRVV-LLPANQDFMVFNHRGKL 96
          + ++  SE +N+    L  +  F +FNHRG++
Sbjct: 69 KDMDASSELKNKTFDTLRNHPSFYLFNHRGRV 99

[Close]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match: A0A6J1F8N1 (membrane magnesium transporter-like OS=Cucurbita moschata OX=3662 GN=LOC111441841 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.1e-52
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT
Sbjct: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match: A0A6J1J6Z8 (membrane magnesium transporter-like OS=Cucurbita maxima OX=3661 GN=LOC111481796 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MG CFVVG+LGVLILAHA+YSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT
Sbjct: 1   MGGCFVVGILGVLILAHASYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKFRSINPESEENRVV LPANQDFMVFNHRGKLFPQKTDLKLKH
Sbjct: 61  VPGKFRSINPESEENRVVFLPANQDFMVFNHRGKLFPQKTDLKLKH 106

[Close]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match: A0A5D3DND5 (Membrane magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002680 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.1e-44
Identity = 91/106 (85.85%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGV FVVGV GVLILAHAAYSTIQYR++LKIMQEEFSGPPF+VAIEL LGLVLS+WAALT
Sbjct: 1   MGVGFVVGVFGVLILAHAAYSTIQYRSLLKIMQEEFSGPPFHVAIELILGLVLSMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKF SINPE+EENR+V LPANQDFMVFNHRG+LFP++ DLKLKH
Sbjct: 61  VPGKFHSINPEAEENRIVSLPANQDFMVFNHRGRLFPKEADLKLKH 106

[Close]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match: A0A1S3B730 (membrane magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103486496 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.1e-44
Identity = 91/106 (85.85%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGV FVVGV GVLILAHAAYSTIQYR++LKIMQEEFSGPPF+VAIEL LGLVLS+WAALT
Sbjct: 1   MGVGFVVGVFGVLILAHAAYSTIQYRSLLKIMQEEFSGPPFHVAIELILGLVLSMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKF SINPE+EENR+V LPANQDFMVFNHRG+LFP++ DLKLKH
Sbjct: 61  VPGKFHSINPEAEENRIVSLPANQDFMVFNHRGRLFPKEADLKLKH 106

[Close]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match: A0A0A0LFT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740190 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.9e-44
Identity = 90/106 (84.91%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           MGV FVVGV GVLILAHAAYSTIQYR++LKIMQEEFSGPPF+VA+EL LGLVLS+WAALT
Sbjct: 1   MGVGFVVGVFGVLILAHAAYSTIQYRSLLKIMQEEFSGPPFHVAVELILGLVLSMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLKLKH 107
           VPGKF SINPE+EENR+V LPANQDFMVFNHRG+LFP++ DLKLKH
Sbjct: 61  VPGKFHSINPEAEENRIVSLPANQDFMVFNHRGRLFPKQADLKLKH 106

[Close]
BLAST of Carg03757-RA vs. TAIR 10
Match: AT5G03345.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           M + F+VGV GVLIL+HAAYSTIQYR +LKIM+EEFS PP NV +EL +GL L +WAALT
Sbjct: 1   MNLGFLVGVFGVLILSHAAYSTIQYRGLLKIMEEEFSRPPINVILELIIGLALCMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLK 104
            PGKF SI+P+S+ENR V LP N DFM+FNHRG+LFP + D+K
Sbjct: 61  FPGKFLSIHPDSDENRAVFLPDNSDFMIFNHRGRLFPPQIDMK 103

[Close]
BLAST of Carg03757-RA vs. TAIR 10
Match: AT5G03345.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 1.5e-34
Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 0 

Query: 1   MGVCFVVGVLGVLILAHAAYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALT 60
           M + F+VGV GVLIL+HAAYSTIQ   +LKIM+EEFS PP NV +EL +GL L +WAALT
Sbjct: 1   MNLGFLVGVFGVLILSHAAYSTIQCIGLLKIMEEEFSRPPINVILELIIGLALCMWAALT 60

Query: 61  VPGKFRSINPESEENRVVLLPANQDFMVFNHRGKLFPQKTDLK 104
            PGKF SI+P+S+ENR V LP N DFM+FNHRG+LFP + D+K
Sbjct: 61  FPGKFLSIHPDSDENRAVFLPDNSDFMIFNHRGRLFPPQIDMK 103

The following BLAST results are available for this feature:
BLAST of Carg03757-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022934760.11.3e-51100.00membrane magnesium transporter-like [Cucurbita moschata] >KAG7017371.1 Membrane ... [more]
KAG6580614.11.3e-51100.00Membrane magnesium transporter, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022983163.16.9e-5096.23membrane magnesium transporter-like [Cucurbita maxima][more]
XP_023529052.14.4e-4995.28membrane magnesium transporter-like [Cucurbita pepo subsp. pepo][more]
XP_038903501.14.3e-4485.85membrane magnesium transporter [Benincasa hispida][more]
BLAST of Carg03757-RA vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2HIM52.2e-3567.96Membrane magnesium transporter OS=Arabidopsis thaliana OX=3702 GN=At5g03345 PE=3... [more]
Q8N4V13.4e-0727.66ER membrane protein complex subunit 5 OS=Homo sapiens OX=9606 GN=MMGT1 PE=1 SV=1[more]
Q8K2734.4e-0729.59ER membrane protein complex subunit 5 OS=Mus musculus OX=10090 GN=Mmgt1 PE=1 SV=... [more]
B5DF514.4e-0729.59ER membrane protein complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Mmgt1 PE=... [more]
Q6TLE45.7e-0730.43ER membrane protein complex subunit 5 OS=Danio rerio OX=7955 GN=mmgt1 PE=2 SV=1[more]
BLAST of Carg03757-RA vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F8N16.1e-52100.00membrane magnesium transporter-like OS=Cucurbita moschata OX=3662 GN=LOC11144184... [more]
A0A6J1J6Z83.3e-5096.23membrane magnesium transporter-like OS=Cucurbita maxima OX=3661 GN=LOC111481796 ... [more]
A0A5D3DND56.1e-4485.85Membrane magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3B7306.1e-4485.85membrane magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103486496 PE=3 SV=1[more]
A0A0A0LFT47.9e-4484.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740190 PE=3 SV=1[more]
BLAST of Carg03757-RA vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G03345.11.6e-3667.96FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G03345.21.5e-3466.02FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018937Membrane magnesium transporterPFAMPF10270MMgTcoord: 9..72
e-value: 9.2E-8
score: 32.3
NoneNo IPR availablePANTHERPTHR21181FAMILY NOT NAMEDcoord: 3..101
NoneNo IPR availablePANTHERPTHR21181:SF7MEMBRANE MAGNESIUM TRANSPORTER 1coord: 3..101

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg03757Carg03757gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg03757-RA:1Carg03757-RA:1exon
Carg03757-RA:2Carg03757-RA:2exon
Carg03757-RA:3Carg03757-RA:3exon
Carg03757-RA:4Carg03757-RA:4exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg03757-RA:five_prime_utrCarg03757-RA:five_prime_utrfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg03757-RA:cdsCarg03757-RA:cdsCDS
Carg03757-RA:cdsCarg03757-RA:cds_2CDS
Carg03757-RA:cdsCarg03757-RA:cds_3CDS
Carg03757-RA:cdsCarg03757-RA:cds_4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg03757-RA:three_prime_utrCarg03757-RA:three_prime_utrthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg03757-RACarg03757-RA-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098655 cation transmembrane transport
cellular_component GO:0005769 early endosome
cellular_component GO:0072546 EMC complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
molecular_function GO:0022890 inorganic cation transmembrane transporter activity