Carg03084-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCCATGGCTTACCTCCCCTCAAAAGCCTCAGATTCCTTCAAGAACAACAGCAACTGAACCCGCAAAACCAGGATCAATCGCTCCATTCCTCTTCCCTTCCAGCGAAGAAGCGAAAGGAGTCTCGCGATTCATCATTATTCTTTCTTCCAGACGCTACTACGCCTCACCCAGCCGCCATTTCCGCTTCTTACTGCTTGCCAACCAAGAAGAGAGTGTGGGCGCTTCACCCTGATTTTCCCCCCGAGTCATTGGATCTCAATGTTGAATACAAGCCTCCTTCAGAGGAAGAAGAATCGGTACCGAGAACAGAATCAGTGAGAGAGAGAAATGAAGAGGATGAAGAAAAGGAAATTTCTGATGTTGAAGACGAAGACGATGGGATCCTCTGTGCGATTTGTCAAAGCACAGACGGAGATCCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTAATGGTACATTCTTCATGTTATGGCAATCCTCTGGCGAAGAGCGTACCAGAAGGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCTAACACAGAGAAGAAGGTATCAGAAACTCCATTTTCATGCTGCCTCTGTCCTCTCAAAGGAGGGGCCATGAAGCCGACGAACGATGGCCGATGGGCGCATATTGTTTGTGGGCTCTTTGTTCCTGAGGTGTTCTTCGAGGACCCAGATGGAAGAGAAGGAATCGATTGCTCATTGATTCTGAAGAGGAGATGGGAATCCAAATGTTACATCTGCAAAACTTCTAGCGGTTGTGCTATAGACTGCTCAGAGCCCAAATGCAATTTGGCTTTTCATGTTACTTGTGGGTTGAAGGAGGATCTCTGTATTGAGTACCAAGAAAGAAGAAGATCTGGTGCCATTGTAGCTGGGTTCTGCAGAAACCACACCGACTTGTGGAAGAAGGTAAATTCATTCCCTTTCTCCTTTTATCCAGGAAGGTTTGAATTCTTAGAATTGACTGTTCTTCCATAGTTCTTGTCTATGTCTAAGGAGTTTCTACTGTGTTAATTATTTGATTGTTTCTCTTACATTTGGTGAATTCTGCAAGCATTTTGTGTTATTGAAAAAAAAAAAAAACCCAAAAGAGCTCCTGCTAATTGATGGGTAGGCATGGATGGTTTACGTGAGATTCCACGATCGTTGGAATCATGACTCTCCACAATGGTATAGATATTATCCACTTTGAGTATAATCTCTCGCGCTTTTGCTTTGAGTTTCCTCAAAAAGTCCCATATCAATGAAAATGTATTGTTTACTTGTAAACTTACGATCCTTCCCTAAATTAGTCCATGTGGGACTCCCTTCTTTACAAGAGTAAAGAGTATGAAAACCTAACCTTTTCAAGAAATCAGAAAAGTCTGAAAGGGAAACCTCAAATAGGACAATATATACGAGTAGTGAGTTTTGTTGGATGAAAGTCTCACATCGGCTGACTTAAGGAATGATCATGGGTTTATGATCAAAGAATACTATCTCTATTGGAATGATGTTTTTTGGGGAAGCTCAAAGCAAAACCATGAGAACTTATGTTCAAAGTGGACAATATCATACTACTATAGAGAGTGGTGTTCAACTACCAAACTTGGGTTGTTATAGTTTATATGAAAGAACGGATTTGAATGTCGTTTGAGTATTGTTTATCTCTTCTGCTTGCAGCAACAACTAACAGGGAAGTTCAAGATCGTGGCTCGTGATGAAAGTAAACTGTAGTTGCTAGGAAATCTATAGCTCGAGATGAAGGTAAATTGTAGTAGGTTGTTCTAGATTTAGAATCAATGTTTAGATATTTATTTCAGTTCATGGCATGGTACTTGCTTGTAATTGTGTTTAATTAAATGATATAATAATAATTAGGCTAAAATACCCTATTTGTCTTGTGAACTTTGTTAGTTCAATTAATGTAAAGTAATAATATGATAATATGATAATCATGAGTTGGTAGAATTTGTCACATATGGTAAGGTTTGGTGGCTAAGACTTTGTTCTTCTAGAAATTTGATTTTTTAAAGTTACTTATGAGAATAATTGGGGTTCACGCTATTATTATTTTTCCATGTTTGTCATTATTGTTAAAATAATGCGATTATAAAAAATATTATTCAATTTTGCCCTTTAATAAGTAATATTTTCTTAAGAAGTTAAGATAGAGTTCAGGGATATGAAAGTCATTTTAGGTCATTTTTTTTAATTTTTAATTTTTTTTTAAATTTAAAAGTATATAAAAAAATATTAAAAAAAACATAAATAATTGAAAAATAAGGCAGCATAACTATGTACTCCATGAATATACTCTGAAGAAACTCGAAAATCAAAATCAAAATCAATCGGACAATCAAAAGTGATGGCGGAGAAGAACAACACATCAAGATTCGGAGGTTCGATTTTGGTACCTTCCGTTCAAGAGTTGGCGAAACAGCCGATCATCGAAGTTCCATCTCGATACATCCGCCCCGATCTCCACTCCTTCCCGATCGTCTCCGCCGCTTCCGAAATCCCCGTTATCGATATGTCGAAGTTTCACTCCGACGCTTCAATGCACTCCGAATTGGCTCGGCTTCATTCCGCTTGCAAAAATTGGGGATTCTTTCAGGTTTTCCTCTTCGTTCCTCTGTTTCTCTCTATAATCTTTTGATTTTGAATCGGTGTTGGTTGCTGAAATTTAGTTGGTGAACCATGGAGTGAGCGATTCGTTGATCGAGAAAATGAAGGCGGAGACGCAGAAGTTCTTCAATCTACCGATTGAAGAGAAGAAGAAAAGGCTATGGCAGAGTGAAGAAGACGCAGAAGGATTTGGACAAGCTTTCGTTGTAAGTGAAGAACAGAAACTGGATTGGTGCGACCTTTTCTTCATCGCTACCGCGCCTCCACATCTCAGGAAACCGCGCTTATTTCAAAACCTCCCTCTCGCTTTCCGGTTCTCTCATTCTCTTGCACTCTCAATTTCGTTCCATTGCAGAGTATCATTCTTAAATTCCGGATTGATTCGGATGCAGAAACACAATGGAGGAGTACTCGGCAGAGGTGAAGAATCTGGCGATGGCGATTTTCGAGCAATTTGAGAAAGCGTTGGGGATCAAAGAAGGGGAGTTGACGGAGATCTTCAAGGATGGTAGTCAGTCGATGAGAACGAACTATTATCCTCCCTGCCCGGAGCCGGAGAAGGTGATCGGACTGACGCCGCATTCCGACGCCGTCGGCCTCACAATTCTGCTACAAATCAACGAAATGGAAGGCCTGAAGATCAAGAAGGACGGGAATTGGGTTGCCGTGACGCCTCTCCCCAATGCGTTCATCGTCAACATTGGTGACATCATGGAGGTAATGATTTCACAAATAAATTTACTTTTTATTTATTTTAATTTCTCATCTACCAAATATTATTTATTTTCAATTGATTGAATTGAAAATTAAAAGTTTAAAATAATTTCGTAGTTTATAAATAAAGAAGTATATAAAAAAAAATATAAAATAAAAGAAAAAATTGCAAACATGCTAAAACAACAAAGTGACACGTGGCATCATAAGGTTGGGCCACATAGTTGGACTACTCCATCTAGGTTTTGCTCTTCCCAAAATATTAAGATAGGAATATAAATTTGTATGAATTTAGTAGTAAAATCCTGTTAGGGTTGTTTTGGAACAAACTTTAGGTGAAAATGAAACTCAATAGTATATTAAAATTAATGTCATAATTTAGGATATTTTTGATAACTTAACAAAATCATAATTAAGAGTCAGAAGGTTAAAATATTATTTTGGTTCTTGTAATTTAAGACGGGCTCGATTTTAGTTTGTATATTTTTAAATAAGTATAAAAACTAAAATTGTACTAATTATATGGCGTTTAATAGATTTATTATTTTGGAAAAGAACCCCTCTGGATCTAAGATTAATCAAAAACAAAATTAAAAATTAAGAAATTTATTATACAAATAATTAAAGTTCAAAAATCTAACCATGGAATGGAAGAGGGAAGGAGATTCTCGAACGAGGAAAAGGAGTCAAGATCTCGAAAGAAATTGACGAGGATCCGTTTGAGTGAAAATCTCATGTACGTTCTGTCGAGTGACAGTAGGGTGACTTATATGTCAACTTTCCACTATCACCCCAAAAAACCAAACTCCCTTTAGTAAAAGTTGCTAAAGTACGCTTAACCTGAGATTTGAAACTAACTGCTTATATAACCTGATATTGCCATAATTGCAAGAACATGATTAGTTCTTAGTAAAGGGGAAGCTTAGATTTACCCGTTAGGATATCACATTTTCAAGGAACCCGTAGATGCTGTTGAAAAAGGATCGTCCCCAACAAGGGCGTTCTAGTGCGTTGTAGATTCTTATCCAAGACTTGTATCATTTGATGATGCCATGTGAATCGATAGAAACATGTGAACTGTATGGTTGTCATGTGAATCACTAGAAACATGTGAACTGTATGGTTGTCATGTGAATCACTAGAAACATGTGAACTGTATGGCTAACCCAATAATGAATGTGAATCGCTAGAAACATGTGAACTGTATGGCTAACCCAATAATGAATGTGAATCGCTAGAAACATGTGAACTGATTGACTGTCATGTGAATCGCTAGAAACGTGTGAACTGTATGACTAACCCAATAATGAAAGTTTCGTAAGGGAACTGGAGCAGGCTAACATGAGACAAACAAAAGATCTTCTTTCTAAAGATATTCGATTCGGAACTATTATATGTCCAAGGTCCAATATTGAAATAATTCCAGAGGTTTTCCTTGACCTTGTCCGTGTCAACAAACAATTCGAAATGCCTCGACTTTTTTAGAACAGGTCCGAGGGTAAAAACAGGTTGAAGATTCATTAAAGTTCAAAAAATCTATATTAGATACATGGGAAGTCTATCTTTGTTTTATTCGTTAAAAAGACGAGAACTTTTTTGTGTCCGATTTGTTGGGATCAACCATAATTGAAAATACCAAGTTGGAAGGAGTTAGAAATTATGTTCAAATTAAGATATACATCACCGGAAGTTTGTTGATTTTGGTTTTGGCAGATAATAACAAATGGGGAATACAAAAGCATAGAACACTGCGCCACGGTGAACGCAAAGAGGGAAAGGCTGTCCATAGCGACCTTCAACAACCCAAGTTTGGAGAAAGAAATAAAGGCAATTCCATCCCTCATCACGCCTCACTCCCCTCCATTGTTTACAACTTTGACATACCAACAGTTCGTGAGGCTGCTCTTTTCTCGCAAACTAGACGGGAAGTCTCACCTCGACACCCTGCGCATTCACACTCCACCAACCTAATACCACATTCACTCCACGGTAAGTCTTTTCCCTCACAATCATA ATGGATTCCCTCCATGGCTTACCTCCCCTCAAAAGCCTCAGATTCCTTCAAGAACAACAGCAACTGAACCCGCAAAACCAGGATCAATCGCTCCATTCCTCTTCCCTTCCAGCGAAGAAGCGAAAGGAGTCTCGCGATTCATCATTATTCTTTCTTCCAGACGCTACTACGCCTCACCCAGCCGCCATTTCCGCTTCTTACTGCTTGCCAACCAAGAAGAGAGTGTGGGCGCTTCACCCTGATTTTCCCCCCGAGTCATTGGATCTCAATGTTGAATACAAGCCTCCTTCAGAGGAAGAAGAATCGGTACCGAGAACAGAATCAGTGAGAGAGAGAAATGAAGAGGATGAAGAAAAGGAAATTTCTGATGTTGAAGACGAAGACGATGGGATCCTCTGTGCGATTTGTCAAAGCACAGACGGAGATCCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTAATGGTACATTCTTCATGTTATGGCAATCCTCTGGCGAAGAGCGTACCAGAAGGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCTAACACAGAGAAGAAGGTATCAGAAACTCCATTTTCATGCTGCCTCTGTCCTCTCAAAGGAGGGGCCATGAAGCCGACGAACGATGGCCGATGGGCGCATATTGTTTGTGGGCTCTTTGTTCCTGAGGTGTTCTTCGAGGACCCAGATGGAAGAGAAGGAATCGATTGCTCATTGATTCTGAAGAGGAGATGGGAATCCAAATGTTACATCTGCAAAACTTCTAGCGGTTGTGCTATAGACTGCTCAGAGCCCAAATGCAATTTGGCTTTTCATGTTACTTGTGGGTTGAAGGAGGATCTCTGTATTGAGTACCAAGAAAGAAGAAGATCTGGTGCCATTGTAGCTGGGTTCTGCAGAAACCACACCGACTTGTGGAAGAAGGTAAATTCATTCCCTTTCTCCTTTTATCCAGGAAGGAAATCTATAGCTCGAGATGAAGAAACTCGAAAATCAAAATCAAAATCAATCGGACAATCAAAAGTGATGGCGGAGAAGAACAACACATCAAGATTCGGAGGTTCGATTTTGGTACCTTCCGTTCAAGAGTTGGCGAAACAGCCGATCATCGAAGTTCCATCTCGATACATCCGCCCCGATCTCCACTCCTTCCCGATCGTCTCCGCCGCTTCCGAAATCCCCGTTATCGATATGTCGAAGTTTCACTCCGACGCTTCAATGCACTCCGAATTGGCTCGGCTTCATTCCGCTTGCAAAAATTGGGGATTCTTTCAGTTGGTGAACCATGGAGTGAGCGATTCGTTGATCGAGAAAATGAAGGCGGAGACGCAGAAGTTCTTCAATCTACCGATTGAAGAGAAGAAGAAAAGGCTATGGCAGAGTGAAGAAGACGCAGAAGGATTTGGACAAGCTTTCGTTGTAAGTGAAGAACAGAAACTGGATTGGTGCGACCTTTTCTTCATCGCTACCGCGCCTCCACATCTCAGGAAACCGCGCTTATTTCAAAACCTCCCTCTCGCTTTCCGAAACACAATGGAGGAGTACTCGGCAGAGGTGAAGAATCTGGCGATGGCGATTTTCGAGCAATTTGAGAAAGCGTTGGGGATCAAAGAAGGGGAGTTGACGGAGATCTTCAAGGATGGTAGTCAGTCGATGAGAACGAACTATTATCCTCCCTGCCCGGAGCCGGAGAAGGTGATCGGACTGACGCCGCATTCCGACGCCGTCGGCCTCACAATTCTGCTACAAATCAACGAAATGGAAGGCCTGAAGATCAAGAAGGACGGGAATTGGGTTGCCGTGACGCCTCTCCCCAATGCGTTCATCGTCAACATTGGTGACATCATGGAGATAATAACAAATGGGGAATACAAAAGCATAGAACACTGCGCCACGGTGAACGCAAAGAGGGAAAGGCTGTCCATAGCGACCTTCAACAACCCAAGTTTGGAGAAAGAAATAAAGGCAATTCCATCCCTCATCACGCCTCACTCCCCTCCATTGTTTACAACTTTGACATACCAACAGTTCGTGAGGCTGCTCTTTTCTCGCAAACTAGACGGGAAGTCTCACCTCGACACCCTGCGCATTCACACTCCACCAACCTAATACCACATTCACTCCACGGTAAGTCTTTTCCCTCACAATCATA ATGGATTCCCTCCATGGCTTACCTCCCCTCAAAAGCCTCAGATTCCTTCAAGAACAACAGCAACTGAACCCGCAAAACCAGGATCAATCGCTCCATTCCTCTTCCCTTCCAGCGAAGAAGCGAAAGGAGTCTCGCGATTCATCATTATTCTTTCTTCCAGACGCTACTACGCCTCACCCAGCCGCCATTTCCGCTTCTTACTGCTTGCCAACCAAGAAGAGAGTGTGGGCGCTTCACCCTGATTTTCCCCCCGAGTCATTGGATCTCAATGTTGAATACAAGCCTCCTTCAGAGGAAGAAGAATCGGTACCGAGAACAGAATCAGTGAGAGAGAGAAATGAAGAGGATGAAGAAAAGGAAATTTCTGATGTTGAAGACGAAGACGATGGGATCCTCTGTGCGATTTGTCAAAGCACAGACGGAGATCCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTAATGGTACATTCTTCATGTTATGGCAATCCTCTGGCGAAGAGCGTACCAGAAGGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCTAACACAGAGAAGAAGGTATCAGAAACTCCATTTTCATGCTGCCTCTGTCCTCTCAAAGGAGGGGCCATGAAGCCGACGAACGATGGCCGATGGGCGCATATTGTTTGTGGGCTCTTTGTTCCTGAGGTGTTCTTCGAGGACCCAGATGGAAGAGAAGGAATCGATTGCTCATTGATTCTGAAGAGGAGATGGGAATCCAAATGTTACATCTGCAAAACTTCTAGCGGTTGTGCTATAGACTGCTCAGAGCCCAAATGCAATTTGGCTTTTCATGTTACTTGTGGGTTGAAGGAGGATCTCTGTATTGAGTACCAAGAAAGAAGAAGATCTGGTGCCATTGTAGCTGGGTTCTGCAGAAACCACACCGACTTGTGGAAGAAGGTAAATTCATTCCCTTTCTCCTTTTATCCAGGAAGGAAATCTATAGCTCGAGATGAAGAAACTCGAAAATCAAAATCAAAATCAATCGGACAATCAAAAGTGATGGCGGAGAAGAACAACACATCAAGATTCGGAGGTTCGATTTTGGTACCTTCCGTTCAAGAGTTGGCGAAACAGCCGATCATCGAAGTTCCATCTCGATACATCCGCCCCGATCTCCACTCCTTCCCGATCGTCTCCGCCGCTTCCGAAATCCCCGTTATCGATATGTCGAAGTTTCACTCCGACGCTTCAATGCACTCCGAATTGGCTCGGCTTCATTCCGCTTGCAAAAATTGGGGATTCTTTCAGTTGGTGAACCATGGAGTGAGCGATTCGTTGATCGAGAAAATGAAGGCGGAGACGCAGAAGTTCTTCAATCTACCGATTGAAGAGAAGAAGAAAAGGCTATGGCAGAGTGAAGAAGACGCAGAAGGATTTGGACAAGCTTTCGTTGTAAGTGAAGAACAGAAACTGGATTGGTGCGACCTTTTCTTCATCGCTACCGCGCCTCCACATCTCAGGAAACCGCGCTTATTTCAAAACCTCCCTCTCGCTTTCCGAAACACAATGGAGGAGTACTCGGCAGAGGTGAAGAATCTGGCGATGGCGATTTTCGAGCAATTTGAGAAAGCGTTGGGGATCAAAGAAGGGGAGTTGACGGAGATCTTCAAGGATGGTAGTCAGTCGATGAGAACGAACTATTATCCTCCCTGCCCGGAGCCGGAGAAGGTGATCGGACTGACGCCGCATTCCGACGCCGTCGGCCTCACAATTCTGCTACAAATCAACGAAATGGAAGGCCTGAAGATCAAGAAGGACGGGAATTGGGTTGCCGTGACGCCTCTCCCCAATGCGTTCATCGTCAACATTGGTGACATCATGGAGATAATAACAAATGGGGAATACAAAAGCATAGAACACTGCGCCACGGTGAACGCAAAGAGGGAAAGGCTGTCCATAGCGACCTTCAACAACCCAAGTTTGGAGAAAGAAATAAAGGCAATTCCATCCCTCATCACGCCTCACTCCCCTCCATTGTTTACAACTTTGACATACCAACAGTTCGTGAGGCTGCTCTTTTCTCGCAAACTAGACGGGAAGTCTCACCTCGACACCCTGCGCATTCACACTCCACCAACCTAA MDSLHGLPPLKSLRFLQEQQQLNPQNQDQSLHSSSLPAKKRKESRDSSLFFLPDATTPHPAAISASYCLPTKKRVWALHPDFPPESLDLNVEYKPPSEEEESVPRTESVRERNEEDEEKEISDVEDEDDGILCAICQSTDGDPSDPIVFCDGCDLMVHSSCYGNPLAKSVPEGDWFCIQCLASSSSNTEKKVSETPFSCCLCPLKGGAMKPTNDGRWAHIVCGLFVPEVFFEDPDGREGIDCSLILKRRWESKCYICKTSSGCAIDCSEPKCNLAFHVTCGLKEDLCIEYQERRRSGAIVAGFCRNHTDLWKKVNSFPFSFYPGRKSIARDEETRKSKSKSIGQSKVMAEKNNTSRFGGSILVPSVQELAKQPIIEVPSRYIRPDLHSFPIVSAASEIPVIDMSKFHSDASMHSELARLHSACKNWGFFQLVNHGVSDSLIEKMKAETQKFFNLPIEEKKKRLWQSEEDAEGFGQAFVVSEEQKLDWCDLFFIATAPPHLRKPRLFQNLPLAFRNTMEEYSAEVKNLAMAIFEQFEKALGIKEGELTEIFKDGSQSMRTNYYPPCPEPEKVIGLTPHSDAVGLTILLQINEMEGLKIKKDGNWVAVTPLPNAFIVNIGDIMEIITNGEYKSIEHCATVNAKRERLSIATFNNPSLEKEIKAIPSLITPHSPPLFTTLTYQQFVRLLFSRKLDGKSHLDTLRIHTPPT Homology
BLAST of Carg03084-RA vs. NCBI nr
Match: KAG7024656.1 (Protein SRG1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 1445.3 bits (3740), Expect = 0.0e+00 Identity = 707/707 (100.00%), Postives = 707/707 (100.00%), Query Frame = 0
BLAST of Carg03084-RA vs. NCBI nr
Match: KAG6591778.1 (Protein SRG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 725.3 bits (1871), Expect = 5.0e-205 Identity = 359/360 (99.72%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of Carg03084-RA vs. NCBI nr
Match: XP_022935942.1 (protein SRG1-like [Cucurbita moschata]) HSP 1 Score: 719.2 bits (1855), Expect = 3.6e-203 Identity = 356/360 (98.89%), Postives = 356/360 (98.89%), Query Frame = 0
BLAST of Carg03084-RA vs. NCBI nr
Match: XP_023534939.1 (protein SRG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 681.0 bits (1756), Expect = 1.1e-191 Identity = 340/356 (95.51%), Postives = 348/356 (97.75%), Query Frame = 0
BLAST of Carg03084-RA vs. NCBI nr
Match: KAG6591777.1 (Peregrin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-182 Identity = 314/333 (94.29%), Postives = 319/333 (95.80%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy Swiss-Prot
Match: Q39224 (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 5.9e-108 Identity = 198/349 (56.73%), Postives = 252/349 (72.21%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy Swiss-Prot
Match: D4N501 (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.2e-106 Identity = 196/358 (54.75%), Postives = 258/358 (72.07%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy Swiss-Prot
Match: D4N500 (Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 6.3e-102 Identity = 192/364 (52.75%), Postives = 252/364 (69.23%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy Swiss-Prot
Match: D4N502 (Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.2e-98 Identity = 182/354 (51.41%), Postives = 248/354 (70.06%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy Swiss-Prot
Match: A2A1A0 (S-norcoclaurine synthase 1 OS=Coptis japonica OX=3442 GN=NCS1 PE=1 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.1e-77 Identity = 154/352 (43.75%), Postives = 221/352 (62.78%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy TrEMBL
Match: A0A6J1F704 (protein SRG1-like OS=Cucurbita moschata OX=3662 GN=LOC111442702 PE=3 SV=1) HSP 1 Score: 719.2 bits (1855), Expect = 1.7e-203 Identity = 356/360 (98.89%), Postives = 356/360 (98.89%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy TrEMBL
Match: A0A6J1F710 (protein Jade-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442704 PE=4 SV=1) HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181 Identity = 312/333 (93.69%), Postives = 318/333 (95.50%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy TrEMBL
Match: A0A6J1IKH6 (bromodomain and PHD finger-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111477079 PE=4 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 1.9e-178 Identity = 307/333 (92.19%), Postives = 313/333 (93.99%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy TrEMBL
Match: A0A1S3CK11 (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501850 PE=3 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157 Identity = 277/355 (78.03%), Postives = 309/355 (87.04%), Query Frame = 0
BLAST of Carg03084-RA vs. ExPASy TrEMBL
Match: A0A6J1BUE5 (protein SRG1-like OS=Momordica charantia OX=3673 GN=LOC111004846 PE=3 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 1.6e-148 Identity = 272/385 (70.65%), Postives = 315/385 (81.82%), Query Frame = 0
BLAST of Carg03084-RA vs. TAIR 10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-109 Identity = 198/348 (56.90%), Postives = 254/348 (72.99%), Query Frame = 0
BLAST of Carg03084-RA vs. TAIR 10
Match: AT1G17020.1 (senescence-related gene 1 ) HSP 1 Score: 393.3 bits (1009), Expect = 4.2e-109 Identity = 198/349 (56.73%), Postives = 252/349 (72.21%), Query Frame = 0
BLAST of Carg03084-RA vs. TAIR 10
Match: AT4G25300.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 387.5 bits (994), Expect = 2.3e-107 Identity = 194/348 (55.75%), Postives = 251/348 (72.13%), Query Frame = 0
BLAST of Carg03084-RA vs. TAIR 10
Match: AT1G17010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 376.7 bits (966), Expect = 4.1e-104 Identity = 195/349 (55.87%), Postives = 248/349 (71.06%), Query Frame = 0
BLAST of Carg03084-RA vs. TAIR 10
Match: AT1G78550.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 363.6 bits (932), Expect = 3.6e-100 Identity = 178/347 (51.30%), Postives = 247/347 (71.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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