Carg02791-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02791-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box/LRR-repeat protein 15-like
Location	Carg_Chr09: 1727300 .. 1731213 (+)
Sequence length	1617
RNA-Seq Expression	Carg02791-RA
Synteny	Carg02791-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTCTTTCCTTCCTTTCTTCCTTCGTTGTTGTTGTTAAAATTTGGGATTTCTGGGATTATTACATCACCACTAGCAACAACAGAAGCATCTCTCAGGTCCGATCAGATCCATTCAAATCTCTTCTTTTCTTCTTCACTTCCTTATCTTTGTCCCCCGTTTTTCAATTCTTGTTTCCCATTTATTTTTTCCCTCTTGATTTTGTGTATTTTCTGTTTTGATTTGCCGCCCAATTCTCGGGGTGTTGTTTATCCTTGGCGGGGGGGTTCGTTTTGATCTTTCTAGGGTTTTCACTGCCTCTGGGCTTTGTTTGTTTCGGTTAATTTTGAAATTGTTTGGTTTGAGGGGGACTGGATACTTGGAAATGTGTGGGATCGTGAGTTAGGGTTCGTGTCAATACCTTGCCTTTGCGTCCAAGTGTATGACGAATTGGTGCTGCTTGTGCTTCACCGTTCCAGAAGAAGACGAAAGGGAAGAGGAACTGAAGAAGGAAGGTGAAATGAAACCCATGATGAGTGAGGGGGATTTTGAGAACCAGGATGACTCTGATCGCATTATGCGAAATGGCGATGATTCTGGTGGGAGTAACCCACTTGCGATTGCTGTTGACGGGCCCGACCGCCACAACGGTGATCGGCTTAGATTGTTTGAGGATATGGTCAGAGCAATGCACGATGACGGCGATGGTGGTGTTCATTGGGACCATGAGCTGCGTGGCGGGGGTGGGGCTGTCAATCCCTGGAACTTTTCTTTTGGAATTCTGCATCAGTCTGAGGGAGGAGAGAGCAGTAGCGCCTCGGCTTTGGCCTTGTCTTCTACGATGGAGACTTCTAATGAGGAACGCGATCGGGATGCCCACCATAAGCGCGCTAAAGTTCACTCCATGTTCATGTGAGTCACTAGTAGACTGCTTGTGGATATGAATTATGCTAAGGTGTCGTGACATTGGCGTTTTTTTTTTGGTTTCCTTTTCTTCTTTTCCCCATTTTTGATAAGGGGTGTTGGGGTTTTTCTTAAATTTTATTTTTAGTGGGATTTAGGACTAGATTTTGTGGTATTTTAGGATGGATATCGTTAGCATTTTTCGATGTTATCATTTACGATTACGGGGTTCTTCGTAACATAGCTATCAACGCATGTTTTTTGTTGTTATATTTGTGCGGGCAGTCTCTGAATAATTTGCTGTTTTTGTTGTTATATTTTCACTTCTGTATATAAATCTATATCGCATAGCACTTTCTTTTCTTGAATAATTGAAGTGGAATCTATATGAAGCAATATGGTTTTATATCGACCTTATCCAACATGCATCTTTTATTGTGTATGTATTAGGCTGTTAGCAGACTATTTGTCTTGTCAATGTATTTTCCATATCTTTTCTCGATTTCAAAATAAAAAATTTGTTTTTAATCAAAAGTGAGGTATTGCTTGAAAAATATTGGCTTTTCTCGAAGATGTCATACGGTGTGCAAAGATGATATCTCGAAGTCTCTTTCAGTTTCAAGTCTTCTGAGTGAGTCTTTACAATGCAAAAGTTTCCTTTTACATGAAGTAGAAAATTATTTATTTTTGGGAAGTTCAATCTTTGTTATTTTGCCTCTTACATGAGTTAAAAAAAATGATAAGTAAAGAAATTGGGTATGTTTATTGTTTTTGATCGTCTTATTAGTTGTTTTTTTGAAGCAACCCTTCATGTACAACGATAGTTAGGGCGTTTCAGTGCACATAGGTGCTCCTAATACATGATTTATTTATATCCAGGAAATCAAAGGTGTATGAGATTTGAGTCATAACTTTTTCTCCATTTGGATAGTAAACAATATCTGAAATATTTTGTCAAATCTGTTCTTTTTAAATTGTTTTCAGGATATGCCCAAACGAGTCCTATTTTCAAGCATTGTCAACCTTGGTTATATACTTATCTCACTCATATGCAAACCTATTTTTGATCCTATTTTTTCATTACTAATTAAGAAAATGTCTTCAGTAAGGTTTATCATTGACGGATGAGTGTAATGGTAATTCAACCAGGTGGTTATAGGCTCAGAACTCGTAGAATCTTTTGTGATTTTGTCTTTCTGCCAAATATGATCTTTTGTTGGAAACTCTGACCTTCACACGGTGGTTGATTATGATTTCTAGTTTAGAAAAGAGTAAACTCTGAGTTAACTAAACTGTTAGTATGTGCACTAATTCTCATTCTGGATAATTCACATTCTCCTCAACCGCTTAGCTCTTGCAAGTTAGCACCCTATCTAGTTACCTACAATTTAGAAGTTAGACCAGCTGATAAGTGCAAAATATGAATGGATGCTTGTTATTCATCTCTAATTATTGTTGCTTATTTTCTTTTCTTTTCATTCTTCCCCAGTGAGAGCTCATTTGCAACTTCATGGCCTTTGGGTGCTGGAAATCCTGCGAGAGATTTTGATTTTAGTAATGGATCATCTTCAAATATGACTAGGAACGAATATCTATGCCATGGTACTACATCAAGCAGAGTTGATGCCGACAAAGGCTTGGAATCTAGTTTTGATAGAGATGATGGGATAAATGAGAATGACACCTGTAAATCGGAAGGATTTGAAGTAAGGATGGATCTCACAGATGATTTACTGCATATGGTATGCATCTCCAGAGATTTATGATTGTTTTCTTGCCTATCTTTTTGTTTCTTGGATTTCTTATTCACATGAAGTTATTTCATAATGAATATCAGGTTTTCTCTTTCTTGGATCACATCAATCTTTGTCGAGCTGCTATAGTCTGCAGGCAGTGGCAAGCTGCTAGTGCTCACGAAGATTTCTGGAGGTGTTTGAATTTTGAAAATAGGAACATATCCATGGAACAATGTAGGTGTTGTTTTTCAAGTGGTTGATTTGCTGCGTTTTCCTTTTATTTTCCAGAGTAGTTGAGATGATTTAAAAAATCTTGGTTGCCTCTTGGAAATAGAGGCAATATGTTATGATGTAACTTCAAAACGTGAAGGATCCAGTATTCGGAGTTTGGATTGTCTTTAGCACTCATGATATGTTAAAAGTCTAGGACTGTTACATATATGGAGCTCGTGTTCAGCACCCAGTATGATTTTTCTCCCTAAATCTTTTTGACTAGGTATATATAATATAGAGGAAAGAACTTCTTGCATGCTATTTTTAGCTTCAGAAATTGCTTTGATTTTTTAAATGATTTTTGGACATAATTGCATAAATGTGATTGGATGTGACAAATCTCTGTAGCGGTTTTGGTGCCAATGCGACATTTTCAATTATATTTCATGTTTAACCTACATTTATCCAGTCACATTTTTCTTTCTGGCCTCCATACAGTATAAATTTATTTGGTCATATTTCTATGTGCCTCTGTATTAACAAGTATCCTATCATATTCTCTATGTTGCTTACTTTCCAATATCATTCTGATTGATTATAAATCTTGACTGCAGTTGAGGATATGTGTGGAAGATATCCAAATGCCACTGAGGTCAATATCTCTGGTGTACCTGCTGTTCACTTGCTTGCCATGAAAGCAGTTTCTTCTTTAAGGTAATGACCACATTTGTTGTTTTTGTCGTTATTGTTTTTTTTTATAAAAAAACTATTATTATTATTATTATTTTATTATCCTGATCTTGAATCTTTTTGCTGTTGCTCTTTATTCTATCATTGTTCCAGAAATCTGGAGGTTTTAACTCTGGGGAGAGGACAACTGGGAGATACCTTTTTTCACGCCCTGGCTGAGTGCCATTTGTTGAAGAGCTTGACTGTCAATGATTCTACGCTAGTTAATGTTACACAAGAGATACCTATAAGCCATGATAGACTGCGTCATCTTCATCTTACTAAATGTCGTGTTATGCGAGTATCTGTTAGGTTGCTACTGTCTATGCATCTTAATGCTAAATGTATTTGA

mRNA sequence

TTTCTCTCTTTCCTTCCTTTCTTCCTTCGTTGTTGTTGTTAAAATTTGGGATTTCTGGGATTATTACATCACCACTAGCAACAACAGAAGCATCTCTCAGGTCCGATCAGATCCATTCAAATCTCTTCTTTTCTTCTTCACTTCCTTATCTTTGTCCCCCGTTTTTCAATTCTTGTTTCCCATTTATTTTTTCCCTCTTGATTTTGTGTATTTTCTGTTTTGATTTGCCGCCCAATTCTCGGGGTGTTGTTTATCCTTGGCGGGGGGGTTCGTTTTGATCTTTCTAGGGTTTTCACTGCCTCTGGGCTTTGTTTGTTTCGGTTAATTTTGAAATTGTTTGGTTTGAGGGGGACTGGATACTTGGAAATGTGTGGGATCGTGAGTTAGGGTTCGTGTCAATACCTTGCCTTTGCGTCCAAGTGTATGACGAATTGGTGCTGCTTGTGCTTCACCGTTCCAGAAGAAGACGAAAGGGAAGAGGAACTGAAGAAGGAAGGTGAAATGAAACCCATGATGAGTGAGGGGGATTTTGAGAACCAGGATGACTCTGATCGCATTATGCGAAATGGCGATGATTCTGGTGGGAGTAACCCACTTGCGATTGCTGTTGACGGGCCCGACCGCCACAACGGTGATCGGCTTAGATTGTTTGAGGATATGGTCAGAGCAATGCACGATGACGGCGATGGTGGTGTTCATTGGGACCATGAGCTGCGTGGCGGGGGTGGGGCTGTCAATCCCTGGAACTTTTCTTTTGGAATTCTGCATCAGTCTGAGGGAGGAGAGAGCAGTAGCGCCTCGGCTTTGGCCTTGTCTTCTACGATGGAGACTTCTAATGAGGAACGCGATCGGGATGCCCACCATAAGCGCGCTAAAGTTCACTCCATGTTCATTGAGAGCTCATTTGCAACTTCATGGCCTTTGGGTGCTGGAAATCCTGCGAGAGATTTTGATTTTAGTAATGGATCATCTTCAAATATGACTAGGAACGAATATCTATGCCATGGTACTACATCAAGCAGAGTTGATGCCGACAAAGGCTTGGAATCTAGTTTTGATAGAGATGATGGGATAAATGAGAATGACACCTGTAAATCGGAAGGATTTGAAGTAAGGATGGATCTCACAGATGATTTACTGCATATGGTTTTCTCTTTCTTGGATCACATCAATCTTTGTCGAGCTGCTATAGTCTGCAGGCAGTGGCAAGCTGCTAGTGCTCACGAAGATTTCTGGAGGTGTTTGAATTTTGAAAATAGGAACATATCCATGGAACAATTTGAGGATATGTGTGGAAGATATCCAAATGCCACTGAGGTCAATATCTCTGGTGTACCTGCTGTTCACTTGCTTGCCATGAAAGCAGTTTCTTCTTTAAGAAATCTGGAGGTTTTAACTCTGGGGAGAGGACAACTGGGAGATACCTTTTTTCACGCCCTGGCTGAGTGCCATTTGTTGAAGAGCTTGACTGTCAATGATTCTACGCTAGTTAATGTTACACAAGAGATACCTATAAGCCATGATAGACTGCGTCATCTTCATCTTACTAAATGTCGTGTTATGCGAGTATCTGTTAGGTTGCTACTGTCTATGCATCTTAATGCTAAATGTATTTGA

Coding sequence (CDS)

ATGACGAATTGGTGCTGCTTGTGCTTCACCGTTCCAGAAGAAGACGAAAGGGAAGAGGAACTGAAGAAGGAAGGTGAAATGAAACCCATGATGAGTGAGGGGGATTTTGAGAACCAGGATGACTCTGATCGCATTATGCGAAATGGCGATGATTCTGGTGGGAGTAACCCACTTGCGATTGCTGTTGACGGGCCCGACCGCCACAACGGTGATCGGCTTAGATTGTTTGAGGATATGGTCAGAGCAATGCACGATGACGGCGATGGTGGTGTTCATTGGGACCATGAGCTGCGTGGCGGGGGTGGGGCTGTCAATCCCTGGAACTTTTCTTTTGGAATTCTGCATCAGTCTGAGGGAGGAGAGAGCAGTAGCGCCTCGGCTTTGGCCTTGTCTTCTACGATGGAGACTTCTAATGAGGAACGCGATCGGGATGCCCACCATAAGCGCGCTAAAGTTCACTCCATGTTCATTGAGAGCTCATTTGCAACTTCATGGCCTTTGGGTGCTGGAAATCCTGCGAGAGATTTTGATTTTAGTAATGGATCATCTTCAAATATGACTAGGAACGAATATCTATGCCATGGTACTACATCAAGCAGAGTTGATGCCGACAAAGGCTTGGAATCTAGTTTTGATAGAGATGATGGGATAAATGAGAATGACACCTGTAAATCGGAAGGATTTGAAGTAAGGATGGATCTCACAGATGATTTACTGCATATGGTTTTCTCTTTCTTGGATCACATCAATCTTTGTCGAGCTGCTATAGTCTGCAGGCAGTGGCAAGCTGCTAGTGCTCACGAAGATTTCTGGAGGTGTTTGAATTTTGAAAATAGGAACATATCCATGGAACAATTTGAGGATATGTGTGGAAGATATCCAAATGCCACTGAGGTCAATATCTCTGGTGTACCTGCTGTTCACTTGCTTGCCATGAAAGCAGTTTCTTCTTTAAGAAATCTGGAGGTTTTAACTCTGGGGAGAGGACAACTGGGAGATACCTTTTTTCACGCCCTGGCTGAGTGCCATTTGTTGAAGAGCTTGACTGTCAATGATTCTACGCTAGTTAATGTTACACAAGAGATACCTATAAGCCATGATAGACTGCGTCATCTTCATCTTACTAAATGTCGTGTTATGCGAGTATCTGTTAGGTTGCTACTGTCTATGCATCTTAATGCTAAATGTATTTGA

Protein sequence

MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAIAVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGGESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSNGSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQEIPISHDRLRHLHLTKCRVMRVSVRLLLSMHLNAKCI

Homology

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BLAST of Carg02791-RA vs. NCBI nr
Match: KAG7024371.1 (F-box/LRR-repeat protein 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 804.3 bits (2076), Expect = 4.8e-229
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVRLLLSMHLNAKCI 398
           EIPISHDRLRHLHLTKCRVMRVSVRLLLSMHLNAKCI
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVRLLLSMHLNAKCI 397

[Close]

BLAST of Carg02791-RA vs. NCBI nr
Match: XP_022976957.1 (F-box/LRR-repeat protein 15-like [Cucurbita maxima])

HSP 1 Score: 780.4 bits (2014), Expect = 7.4e-222
Identity = 384/385 (99.74%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. NCBI nr
Match: XP_023534905.1 (F-box/LRR-repeat protein 15-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.9 bits (2010), Expect = 2.1e-221
Identity = 383/385 (99.48%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHD+GDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDEGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. NCBI nr
Match: KAG6591488.1 (F-box/LRR-repeat protein 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 778.9 bits (2010), Expect = 2.1e-221
Identity = 383/385 (99.48%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNP RDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPVRDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. NCBI nr
Match: XP_022936067.1 (F-box/LRR-repeat protein 15-like [Cucurbita moschata])

HSP 1 Score: 776.2 bits (2003), Expect = 1.4e-220
Identity = 382/385 (99.22%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHDDGDGGVHWDH+LRG GGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDDGDGGVHWDHQLRGRGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. ExPASy Swiss-Prot
Match: Q9SMY8 (F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana OX=3702 GN=FBL15 PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-68
Identity = 173/397 (43.58%), Postives = 227/397 (57.18%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREE---ELKKEG---EMKPMMSEGDFENQDDSDRIMRNGDDSGG 60
           M  WC  CFT  +EDE ++    +KK+     M     +GDF N  +++R          
Sbjct: 1   MRIWCFSCFTDEDEDEEDDNGGRVKKQSLATAMDNSNGDGDFVNFGENER---------- 60

Query: 61  SNPLAIAVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGIL 120
                       R    RLRL  +   A   + D    W  E+                L
Sbjct: 61  ----------APRVPRWRLRLCAEESEAAWAELDR--FWTSEIP---------------L 120

Query: 121 HQSEGGESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPA- 180
           +Q   GESSS     ++   + + EE D D++HKRAKV+S   E    +     AGN   
Sbjct: 121 NQLVQGESSSN---VVAEAEDCTMEEADHDSYHKRAKVYSGLAECRSVSGVSSDAGNSVS 180

Query: 181 ---RDFDFSNGSSSNMTRNEYLCHG--TTSSRVDADKGLESSFDRDDGINENDTCKSEGF 240
              R   F   SSS  T  +  C       +R D  K        DDG ++N +  +E F
Sbjct: 181 SVERTVSFGIASSSR-TDTDMFCQNFILNYNRKDGKK--------DDG-DDNGSSDTEDF 240

Query: 241 EVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFED 300
           EV +DLTDDLLHMVFSFL+H++LCR+A+VCRQW+ ASAHEDFWR LNFEN  ISMEQFE+
Sbjct: 241 EVHIDLTDDLLHMVFSFLNHVDLCRSAMVCRQWRVASAHEDFWRVLNFENIRISMEQFEN 300

Query: 301 MCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSL 360
           MC RYPNATEVN+ G PAV+ LAMKA ++LRNLEVLT+G+G + ++FF AL EC++L+S+
Sbjct: 301 MCSRYPNATEVNVYGAPAVNALAMKAATTLRNLEVLTIGKGHISESFFQALGECNMLRSV 347

Query: 361 TVNDSTLVNVTQEIPISHDRLRHLHLTKCRVMRVSVR 386
           TV+D+ L N  QEI +SHDRLR L +TKCRVMR+S+R
Sbjct: 361 TVSDAILGNGAQEIHLSHDRLRELKITKCRVMRLSIR 347

[Close]

BLAST of Carg02791-RA vs. ExPASy TrEMBL
Match: A0A6J1IH46 (F-box/LRR-repeat protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111477174 PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 3.6e-222
Identity = 384/385 (99.74%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. ExPASy TrEMBL
Match: A0A6J1F7D8 (F-box/LRR-repeat protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111442781 PE=4 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 6.7e-221
Identity = 382/385 (99.22%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60
           MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI
Sbjct: 1   MTNWCCLCFTVPEEDEREEELKKEGEMKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAI 60

Query: 61  AVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGILHQSEGG 120
           AVDGPDRH+GDRLRLFEDMVRAMHDDGDGGVHWDH+LRG GGAVNPWNFSFGILHQSEGG
Sbjct: 61  AVDGPDRHDGDRLRLFEDMVRAMHDDGDGGVHWDHQLRGRGGAVNPWNFSFGILHQSEGG 120

Query: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180
           ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN
Sbjct: 121 ESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSN 180

Query: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240
           GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH
Sbjct: 181 GSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLH 240

Query: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300
           MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN
Sbjct: 241 MVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVN 300

Query: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360
           ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ
Sbjct: 301 ISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQ 360

Query: 361 EIPISHDRLRHLHLTKCRVMRVSVR 386
           EIPISHDRLRHLHLTKCRVMRVSVR
Sbjct: 361 EIPISHDRLRHLHLTKCRVMRVSVR 385

[Close]

BLAST of Carg02791-RA vs. ExPASy TrEMBL
Match: A0A0A0L447 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G647990 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.4e-186
Identity = 338/395 (85.57%), Postives = 356/395 (90.13%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDE-----REEELKK-EGEMKPMMSEGDFENQDDSDRIMRNGDDSGG 60
           MT WCCLCFTV EE+E     REEE+KK EGEMKPMM E  FENQDDSDRI+RNGDDS G
Sbjct: 1   MTIWCCLCFTVGEEEEEDERAREEEVKKEEGEMKPMMREEVFENQDDSDRIVRNGDDSQG 60

Query: 61  SNPLAIAVDG-PDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRG---GGGAVNPWNFS 120
           SNPLA AVD  P+RH+GDRLRLFEDMVRAMHD GDGG HWD ELRG   GGGA+NPWN S
Sbjct: 61  SNPLASAVDDVPERHDGDRLRLFEDMVRAMHDGGDGGAHWDDELRGAGAGGGAINPWNLS 120

Query: 121 FGILHQSEGGESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAG 180
           FGI+HQSEGGESSSASAL LSS +ETS EERDRDAHHKRAKVHS FIESSFAT WPLGAG
Sbjct: 121 FGIMHQSEGGESSSASALPLSSMVETSMEERDRDAHHKRAKVHSKFIESSFATPWPLGAG 180

Query: 181 NPARDFDFSNGSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEGFEV 240
           NP R++DF +GS S M+RNE+L H +TSSR DADK LESSF RDDGINENDTCKSEGFEV
Sbjct: 181 NPMREYDFIHGSPSIMSRNEFLYHASTSSRFDADKDLESSFGRDDGINENDTCKSEGFEV 240

Query: 241 RMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFEDMC 300
           RMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFEN+NISMEQFEDMC
Sbjct: 241 RMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENKNISMEQFEDMC 300

Query: 301 GRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSLTV 360
           GRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQL D FFHALA+CHLLKSLTV
Sbjct: 301 GRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLADNFFHALADCHLLKSLTV 360

Query: 361 NDSTLVNVTQEIPISHDRLRHLHLTKCRVMRVSVR 386
           NDSTLVNVTQEIPISHD LRHLHLTKCRV+R+SVR
Sbjct: 361 NDSTLVNVTQEIPISHDGLRHLHLTKCRVIRISVR 395

[Close]

BLAST of Carg02791-RA vs. ExPASy TrEMBL
Match: A0A1S3BVG5 (F-box/LRR-repeat protein 15 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493700 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.0e-185
Identity = 339/398 (85.18%), Postives = 355/398 (89.20%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEED------EREEELKK-EGEMKPMMSEGDFENQDDSDRIMRNGDDSG 60
           MT WCCLCFTV EE+      EREEE+KK EGEMKPMM E  FENQDDSDRI+RNGDDS 
Sbjct: 1   MTIWCCLCFTVGEEEEEEDEREREEEVKKEEGEMKPMMREEVFENQDDSDRIVRNGDDSQ 60

Query: 61  GSNPLAIAVDG-PDRHNGDRLRLFEDMVRAMHDDGDGGV--HWDHELRG---GGGAVNPW 120
           GSNPLA AVD  P+RH  D+LRLFEDMVRAMHD GDGG   HWD ELRG   GGG +NPW
Sbjct: 61  GSNPLASAVDDVPERHGSDQLRLFEDMVRAMHDGGDGGAHCHWDDELRGGGAGGGVINPW 120

Query: 121 NFSFGILHQSEGGESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPL 180
           N SFGI+HQSEGGESSSASAL LSS  ETS EERDRDAHHKRAKVHS FIESSFAT WPL
Sbjct: 121 NLSFGIMHQSEGGESSSASALPLSSMAETSIEERDRDAHHKRAKVHSKFIESSFATPWPL 180

Query: 181 GAGNPARDFDFSNGSSSNMTRNEYLCHGTTSSRVDADKGLESSFDRDDGINENDTCKSEG 240
           GAGNP R+FDF +GSSS M+RNE+L H +TSSR+DADK LESSF RDDGINENDTCKSEG
Sbjct: 181 GAGNPMREFDFIHGSSSIMSRNEFLYHASTSSRIDADKDLESSFGRDDGINENDTCKSEG 240

Query: 241 FEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFE 300
           FEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFE
Sbjct: 241 FEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFE 300

Query: 301 DMCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKS 360
           DMCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQL D FFHALA+CHLLKS
Sbjct: 301 DMCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLADNFFHALADCHLLKS 360

Query: 361 LTVNDSTLVNVTQEIPISHDRLRHLHLTKCRVMRVSVR 386
           LTVNDSTLVNVTQEIPISHDRLRHLHLTKCRV+R+SVR
Sbjct: 361 LTVNDSTLVNVTQEIPISHDRLRHLHLTKCRVIRISVR 398

[Close]

BLAST of Carg02791-RA vs. ExPASy TrEMBL
Match: A0A5A7VC48 (F-box/LRR-repeat protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002570 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.2e-174
Identity = 317/365 (86.85%), Postives = 331/365 (90.68%), Query Frame = 0


Query: 27  MKPMMSEGDFENQDDSDRIMRNGDDSGGSNPLAIAVDG-PDRHNGDRLRLFEDMVRAMHD 86
           MKPMM E  FENQDDSDRI+RNGDDS GSNPLA AVD  P+RH  D+LRLFEDMVRAMHD
Sbjct: 1   MKPMMREEVFENQDDSDRIVRNGDDSQGSNPLASAVDDVPERHGSDQLRLFEDMVRAMHD 60

Query: 87  DGDGGV--HWDHELRG---GGGAVNPWNFSFGILHQSEGGESSSASALALSSTMETSNEE 146
            GDGG   HWD ELRG   GGG +NPWN SFGI+HQSEGGESSSASAL LSS  ETS EE
Sbjct: 61  GGDGGAHCHWDDELRGGGAGGGVINPWNLSFGIMHQSEGGESSSASALPLSSMAETSIEE 120

Query: 147 RDRDAHHKRAKVHSMFIESSFATSWPLGAGNPARDFDFSNGSSSNMTRNEYLCHGTTSSR 206
           RDRDAHHKRAKVHS FIESSFAT WPLGAGNP R+FDF +GSSS M+RNE+L H +TSSR
Sbjct: 121 RDRDAHHKRAKVHSKFIESSFATPWPLGAGNPMREFDFIHGSSSIMSRNEFLYHASTSSR 180

Query: 207 VDADKGLESSFDRDDGINENDTCKSEGFEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQ 266
           +DADK LESSF RDDGINENDTCKSEGFEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQ
Sbjct: 181 IDADKDLESSFGRDDGINENDTCKSEGFEVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQ 240

Query: 267 WQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVNISGVPAVHLLAMKAVSSLRN 326
           WQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVNISGVPAVHLLAMKAVSSLRN
Sbjct: 241 WQAASAHEDFWRCLNFENRNISMEQFEDMCGRYPNATEVNISGVPAVHLLAMKAVSSLRN 300

Query: 327 LEVLTLGRGQLGDTFFHALAECHLLKSLTVNDSTLVNVTQEIPISHDRLRHLHLTKCRVM 386
           LEVLTLGRGQL D FFHALA+CHLLKSLTVNDSTLVNVTQEIPISHDRLRHLHLTKCRV+
Sbjct: 301 LEVLTLGRGQLADNFFHALADCHLLKSLTVNDSTLVNVTQEIPISHDRLRHLHLTKCRVI 360

[Close]

BLAST of Carg02791-RA vs. TAIR 10
Match: AT4G33210.1 (F-box family protein )

HSP 1 Score: 261.9 bits (668), Expect = 8.2e-70
Identity = 173/397 (43.58%), Postives = 227/397 (57.18%), Query Frame = 0


Query: 1   MTNWCCLCFTVPEEDEREE---ELKKEG---EMKPMMSEGDFENQDDSDRIMRNGDDSGG 60
           M  WC  CFT  +EDE ++    +KK+     M     +GDF N  +++R          
Sbjct: 1   MRIWCFSCFTDEDEDEEDDNGGRVKKQSLATAMDNSNGDGDFVNFGENER---------- 60

Query: 61  SNPLAIAVDGPDRHNGDRLRLFEDMVRAMHDDGDGGVHWDHELRGGGGAVNPWNFSFGIL 120
                       R    RLRL  +   A   + D    W  E+                L
Sbjct: 61  ----------APRVPRWRLRLCAEESEAAWAELDR--FWTSEIP---------------L 120

Query: 121 HQSEGGESSSASALALSSTMETSNEERDRDAHHKRAKVHSMFIESSFATSWPLGAGNPA- 180
           +Q   GESSS     ++   + + EE D D++HKRAKV+S   E    +     AGN   
Sbjct: 121 NQLVQGESSSN---VVAEAEDCTMEEADHDSYHKRAKVYSGLAECRSVSGVSSDAGNSVS 180

Query: 181 ---RDFDFSNGSSSNMTRNEYLCHG--TTSSRVDADKGLESSFDRDDGINENDTCKSEGF 240
              R   F   SSS  T  +  C       +R D  K        DDG ++N +  +E F
Sbjct: 181 SVERTVSFGIASSSR-TDTDMFCQNFILNYNRKDGKK--------DDG-DDNGSSDTEDF 240

Query: 241 EVRMDLTDDLLHMVFSFLDHINLCRAAIVCRQWQAASAHEDFWRCLNFENRNISMEQFED 300
           EV +DLTDDLLHMVFSFL+H++LCR+A+VCRQW+ ASAHEDFWR LNFEN  ISMEQFE+
Sbjct: 241 EVHIDLTDDLLHMVFSFLNHVDLCRSAMVCRQWRVASAHEDFWRVLNFENIRISMEQFEN 300

Query: 301 MCGRYPNATEVNISGVPAVHLLAMKAVSSLRNLEVLTLGRGQLGDTFFHALAECHLLKSL 360
           MC RYPNATEVN+ G PAV+ LAMKA ++LRNLEVLT+G+G + ++FF AL EC++L+S+
Sbjct: 301 MCSRYPNATEVNVYGAPAVNALAMKAATTLRNLEVLTIGKGHISESFFQALGECNMLRSV 347

Query: 361 TVNDSTLVNVTQEIPISHDRLRHLHLTKCRVMRVSVR 386
           TV+D+ L N  QEI +SHDRLR L +TKCRVMR+S+R
Sbjct: 361 TVSDAILGNGAQEIHLSHDRLRELKITKCRVMRLSIR 347

The following BLAST results are available for this feature:

BLAST of Carg02791-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024371.1	4.8e-229	100.00	F-box/LRR-repeat protein 15 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022976957.1	7.4e-222	99.74	F-box/LRR-repeat protein 15-like [Cucurbita maxima]	[more]
XP_023534905.1	2.1e-221	99.48	F-box/LRR-repeat protein 15-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6591488.1	2.1e-221	99.48	F-box/LRR-repeat protein 15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936067.1	1.4e-220	99.22	F-box/LRR-repeat protein 15-like [Cucurbita moschata]	[more]

BLAST of Carg02791-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMY8	1.2e-68	43.58	F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana OX=3702 GN=FBL15 PE=2 SV=2	[more]

BLAST of Carg02791-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH46	3.6e-222	99.74	F-box/LRR-repeat protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111477174 PE=...	[more]
A0A6J1F7D8	6.7e-221	99.22	F-box/LRR-repeat protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111442781 P...	[more]
A0A0A0L447	1.4e-186	85.57	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G647990 PE=4 ...	[more]
A0A1S3BVG5	2.0e-185	85.18	F-box/LRR-repeat protein 15 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493700 P...	[more]
A0A5A7VC48	1.2e-174	86.85	F-box/LRR-repeat protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Carg02791-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33210.1	8.2e-70	43.58	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 234..274 e-value: 9.5E-6 score: 35.1
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 236..275 e-value: 8.3E-7 score: 28.8
None	No IPR available	GENE3D	1.20.1280.50		coord: 232..266 e-value: 4.5E-9 score: 38.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..48
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 136..385
None	No IPR available	PANTHER	PTHR13318:SF69	F-BOX/LRR-REPEAT PROTEIN 15	coord: 136..385
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 254..386
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 267..395 e-value: 2.0E-7 score: 31.7
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 232..287

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg02791	Carg02791	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02791-RA:1	Carg02791-RA:1	exon
Carg02791-RA:2	Carg02791-RA:2	exon
Carg02791-RA:3	Carg02791-RA:3	exon
Carg02791-RA:4	Carg02791-RA:4	exon
Carg02791-RA:5	Carg02791-RA:5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02791-RA:five_prime_utr	Carg02791-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02791-RA:cds	Carg02791-RA:cds	CDS
Carg02791-RA:cds	Carg02791-RA:cds_2	CDS
Carg02791-RA:cds	Carg02791-RA:cds_3	CDS
Carg02791-RA:cds	Carg02791-RA:cds_4	CDS
Carg02791-RA:cds	Carg02791-RA:cds_5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg02791-RA	Carg02791-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1905393	plant organ formation
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding