Carg02678-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02678-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein
Location	Carg_Chr02: 7457985 .. 7462137 (+)
Sequence length	1263
RNA-Seq Expression	Carg02678-RA
Synteny	Carg02678-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTTTGTTTCTTCCTCACTTGCCTCTCCTTCCTCCTCTTTATAAAGTCCCTCCCTCTCAAACCACTCCCACTATGGGCATATGAGATGAGGCTCTTGCCCCACTGGTTCTGGAAAGAATTATCATTCTTTCCCATATACAAGGTGATCAAGAACAGTCTTTGTACATATCTTTTTAGTATTCCATCGAGGATGTCCTTGAAAAAGAAATATCTTTCAAAAATAGAGAATGTTGAGGAAAACAGTGAGATGTCGGTGTTGGATTTGCCAGAATTGGTCTTGGAATGCATTCTAGAGAGACTTCCACCGGGCGCTCTATGTAGTATGGCGGGTGTTTGTAGTTCATTGAGAGAGAAATGTATAAGTGACCATCTTTGGGAGAAGCACATACAACGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGTATCTTGCTTCTAGAGTTGGTGCAAGTAATCTTAAGCAAAACAAGCAGAAGAGCATTATTAGACTTTTGTCTTTTGGTTGGTCTCTTTCATGGATCAGATCCAAGGCTAATGACAATAACACGCAACGAAATTCGCTGCCGGTTGATTCAATCATGTCTTGGTATCTTGCGCTTGAGACTGGCAGATTCTGGTTCCCAGCTCAGGTCTATAACCGTGAGGTAAACGACTCGTAATCGTATGCTTCCAGTTGTGAACAAGTCTTTTCTATGTTTTCAGATTTCCCCGCTTCCTGTCATTAAGTGTTTAGCTCTATCTGATCTGAATAGTTAATAGCTAACTGTGTATTGGGCTGGCCTTTTCAAAGTATTGTACCTGATATTTGAAGTATTCAATTATGCAGAATGGCCATGTAGGTTTCATGTTGTCTTGTTATGATGCAAAGCTTTGCTACGATCCCCACACGGACACCTTCCAAGCGAGGTGATTAAGCAAACACCCACTGTCTAACTCGGCAGCATCAATTATTGCCCTGTTTTCTTTTACAGATCTTTCAATTGAGAAAATGTACTCTTTCTTACAGGTACCCTCCACATGGCAGGCGAGCAATCGCAATTGAGAATGGCGTGCAATGGGAGAGGCTTAGAGCGCCGCCCATCGATACTCCTCCACACGATCTTCATATCTCAGACTGTTTGAATGAATTGTGCCCTGGTGACCATATTGAGATACAGTGGAGAAAAAACAAAGAATTCCCTTATGGTTTGTTCTTCAGCCTAGATCTCTTTTGAGCTTTTTTGCAATTTATCTATTGAATTTCTACCTGTTCGGAGTCCTAGCTCAAACCATCCCCTTTCGACTTGTTCGTCTAAATCAAGGTATTACAGTTTGACGAAAGGTCATAGAAGCAAAAGGAAAAGACCCATATGAACATAGAAAAGGAAATACTAAATAGTCGGTCAATCGTTTATCAAAGTTAGCTCGTTTTTTGTTTCTTTGGGGACAGAGAGTTCTTTTTATAATATAAGAACTTTGTTTTACGTAATAAGAACCATTACTGTTGTAAACTTTTTATAGCTAATTAACTAAGGGCTCATAAACTGTGGCATATGCATTGCAGGTTGGTGGTATGGCGTTGTAGGTCACTTGGAAACATGTGATCGAAATGCTACTCACTGCAGATGTCATTATAGTGGTGAGTTTTCTTCCCAACTTCTAGTTTGATCATTTATTTTGGATCGTTGTTTGTTCTATGGAAGTTCAAGCAGCAGAGTTACTGATCATTGAGCTAGTTCTGAAATCTTTATTATAAGATTCAACTCAAAATAGAAACCAATTTTCATAATTTAAACGAAAGAACAAAGCATAAAGAATATAGAAAACCCCACAAAAAGAGTGGACGTAGCTACTTAAGAACACAGAGAGGCCTCCCCGCTTCTCCTTTGTCTTAGAAGTAGTTGTTTTCTGAACCTTCATTTACTTGTAGTCTGAGGTATTATGCCATTCTTCGTTGTTTTGATGAGTCATTACTTGACCTGCACTGGCATGGGCACAGTCAGTAGTTTGTATGGGTCGCTGTTTCAGAACCCTATCGAAAAGCATCTCATTTTTAAAATGTGGGCCAAAACTTTTTATGCTATTTGATTGGTCCCCTAGACATTATTGTCAGTATGTCATCATTTCTACCAACATATTCATAGCTTTTGTCCCAGTGGAATGCTTGTGTCCAACCACTGATCTATTGAATTGTCTTAGTGGAGCTTTTATGGCCAACCACTCTGAGGTAACTGGACGCTGCCCAACCCTTTTGTTACCTGTTGAGTTGGTGTTTATTTTAACAATTGGGAAATTAATGCAGTCCGGAGATAGAAAAGGACCTAAGGACCTCCTTTTAAAGGAAAAATAAAAAAAAACAAACTTGTTTAACTCGCTAGGCCTTTGGAACAAAAATGACTTTGTTCACATGTTGGACCATATGGCTAGTTATATATACTAGAATATTTGCAACGATTGGAAAGACAAAACCGATCGAGAGGAAAGTTGCTTTTATGGTTGGTGCTTTTCCATTGGATATAGATCGCACTAGCAACACGAGAGGGGAATTCTAACGTCTGATCATTTGGTTGAGAGTATAATGCTTTAACTAATCGAGCTATCCTTGGGTTGGATTGTTCTGTGCTGGAGTGTTGGTTTCTCTTTATTCTTAAAGATTATCCACTAGGTGCAGCTGGTTTGTACTTTGTTTTTTTCGACCTTTTTTAGTCCTTTTGGTTAGGATGAACTTTATTGCTACTTTTTCAAAATAATCACTACTTATCTGCATCTGGGATCAATATAATGGGACAAGTACTTGATGACAAATATTTGGAAATAGGACAGTAGTAGTGTAATGCCCCAGATTCACCACCAGCAGATAATGTCTTTTTTGGGCTTTCCCATTCGAACTTCTCTTCAAGGCTTTAAAACGCGCTTGCTAGGGGAAGGTTTCCACGCCCTTATAAAGGGTGATTTGTTCTCCTCCCCAACCAATGTGGGACAACACAATTCACCTCCCTTCGGGGCCCAACGTCCTTGCTGGCACTCGTTCCTTTCTCCAATCGATGTGGGACCACCACCGAATCCACCCCCTTTGGGGTCCAGCGTCCTTACTGGCACACCGCATCGTGTCTACCCCCCTTCGGGGAACAGCAAGAAGGCTGACACATTGTCTGGTGTCTAGCTCTGATACCATTTATAACGACCCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGCTTTAAAATGCGTCCGCTAGGGGAAGGTTTCCACACCCTAATAAAGGGTGATTTGTTATCCTCCCCAACCTATGTAGGACATCATGATCCACCCTTCTTCGGGACCCAACGTCCTCGCTGGCACTCGTTCCTTTCTCCAATCAATGTGGGACCACCACCAAATCCACCCCCTTTGGGGTCCAGCGTCCTTACTAGCACACCGCATCGTGTCTACCCCCATTCGGGAAACAACGAGAAAGTTGGCACATCGTCCGGTGTCTAGCTCTGATACCACTTGTAACGACCCGGGCTTACTATTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGACTTCCGTTCAAGGCTTTAATACGCGTCTGTTGGGGGAAGGTTTCCACACCCTTATATATGGTGGTTTGTTCTCCTCCCCAACCAACGTGGAAGTAGGATATCTGATATACTAGTAGGCTAAGAATCTGTGACTTCAAAAGCATTTAAGTTCCATCAGCTTAAGATTTTGAAATCATCATTTCTGTTATGAATATTGGTAAAAACTTGGTGTTCATCAGTGACTTCTTCCATCATCAAAGTTCCAAGTTGTGTGATTATCATATGAAACTGTAGAAGTGGTTGCTGATATGTAAAATTCTGTGAACAGAAACTGTCGTGCTGGAGTTCAATCAGTACACCCCTGGATCAAGATGGAGACTCGCAGCCATCAACCGAAAGGACCATCGAGAAGAAGGCAACGAGGTCGACGGGTTCTACGGAGGAATCCGAAAGCTTTGCTCCGGTGAAGAAATCTCAATGTGGAAACAACTTTGGCCTACAGACATCTTGGAGTAGGTAGGAGCTTGGTGCCCCCTTCACACCTCTTGAGCTTGGAGCTCATGCTTCTTCTTCTTCTTCTTCTTCTTCTTC

mRNA sequence

ATGCTTCTTTGTTTCTTCCTCACTTGCCTCTCCTTCCTCCTCTTTATAAAGTCCCTCCCTCTCAAACCACTCCCACTATGGGCATATGAGATGAGGCTCTTGCCCCACTGGTTCTGGAAAGAATTATCATTCTTTCCCATATACAAGGTGATCAAGAACAGTCTTTGTACATATCTTTTTAGTATTCCATCGAGGATGTCCTTGAAAAAGAAATATCTTTCAAAAATAGAGAATGTTGAGGAAAACAGTGAGATGTCGGTGTTGGATTTGCCAGAATTGGTCTTGGAATGCATTCTAGAGAGACTTCCACCGGGCGCTCTATGTAGTATGGCGGGTGTTTGTAGTTCATTGAGAGAGAAATGTATAAGTGACCATCTTTGGGAGAAGCACATACAACGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGTATCTTGCTTCTAGAGTTGGTGCAAGTAATCTTAAGCAAAACAAGCAGAAGAGCATTATTAGACTTTTGTCTTTTGGTTGGTCTCTTTCATGGATCAGATCCAAGGCTAATGACAATAACACGCAACGAAATTCGCTGCCGGTTGATTCAATCATGTCTTGGTATCTTGCGCTTGAGACTGGCAGATTCTGGTTCCCAGCTCAGGTCTATAACCGTGAGAATGGCCATGTAGGTTTCATGTTGTCTTGTTATGATGCAAAGCTTTGCTACGATCCCCACACGGACACCTTCCAAGCGAGGTACCCTCCACATGGCAGGCGAGCAATCGCAATTGAGAATGGCGTGCAATGGGAGAGGCTTAGAGCGCCGCCCATCGATACTCCTCCACACGATCTTCATATCTCAGACTGTTTGAATGAATTGTGCCCTGGTGACCATATTGAGATACAGTGGAGAAAAAACAAAGAATTCCCTTATGGTTGGTGGTATGGCGTTGTAGGTCACTTGGAAACATGTGATCGAAATGCTACTCACTGCAGATGTCATTATAGTGAAACTGTCGTGCTGGAGTTCAATCAGTACACCCCTGGATCAAGATGGAGACTCGCAGCCATCAACCGAAAGGACCATCGAGAAGAAGGCAACGAGGTCGACGGGTTCTACGGAGGAATCCGAAAGCTTTGCTCCGGTGAAGAAATCTCAATGTGGAAACAACTTTGGCCTACAGACATCTTGGAGTAGGTAGGAGCTTGGTGCCCCCTTCACACCTCTTGAGCTTGGAGCTCATGCTTCTTCTTCTTCTTCTTCTTCTTCTTC

Coding sequence (CDS)

ATGCTTCTTTGTTTCTTCCTCACTTGCCTCTCCTTCCTCCTCTTTATAAAGTCCCTCCCTCTCAAACCACTCCCACTATGGGCATATGAGATGAGGCTCTTGCCCCACTGGTTCTGGAAAGAATTATCATTCTTTCCCATATACAAGGTGATCAAGAACAGTCTTTGTACATATCTTTTTAGTATTCCATCGAGGATGTCCTTGAAAAAGAAATATCTTTCAAAAATAGAGAATGTTGAGGAAAACAGTGAGATGTCGGTGTTGGATTTGCCAGAATTGGTCTTGGAATGCATTCTAGAGAGACTTCCACCGGGCGCTCTATGTAGTATGGCGGGTGTTTGTAGTTCATTGAGAGAGAAATGTATAAGTGACCATCTTTGGGAGAAGCACATACAACGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGTATCTTGCTTCTAGAGTTGGTGCAAGTAATCTTAAGCAAAACAAGCAGAAGAGCATTATTAGACTTTTGTCTTTTGGTTGGTCTCTTTCATGGATCAGATCCAAGGCTAATGACAATAACACGCAACGAAATTCGCTGCCGGTTGATTCAATCATGTCTTGGTATCTTGCGCTTGAGACTGGCAGATTCTGGTTCCCAGCTCAGGTCTATAACCGTGAGAATGGCCATGTAGGTTTCATGTTGTCTTGTTATGATGCAAAGCTTTGCTACGATCCCCACACGGACACCTTCCAAGCGAGGTACCCTCCACATGGCAGGCGAGCAATCGCAATTGAGAATGGCGTGCAATGGGAGAGGCTTAGAGCGCCGCCCATCGATACTCCTCCACACGATCTTCATATCTCAGACTGTTTGAATGAATTGTGCCCTGGTGACCATATTGAGATACAGTGGAGAAAAAACAAAGAATTCCCTTATGGTTGGTGGTATGGCGTTGTAGGTCACTTGGAAACATGTGATCGAAATGCTACTCACTGCAGATGTCATTATAGTGAAACTGTCGTGCTGGAGTTCAATCAGTACACCCCTGGATCAAGATGGAGACTCGCAGCCATCAACCGAAAGGACCATCGAGAAGAAGGCAACGAGGTCGACGGGTTCTACGGAGGAATCCGAAAGCTTTGCTCCGGTGAAGAAATCTCAATGTGGAAACAACTTTGGCCTACAGACATCTTGGAGTAG

Protein sequence

MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLFSIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREKCISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSWIRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYDPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQWRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHREEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE

Homology

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BLAST of Carg02678-RA vs. NCBI nr
Match: KAG7035894.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 850.5 bits (2196), Expect = 5.8e-243
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 395

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BLAST of Carg02678-RA vs. NCBI nr
Match: KAG6605948.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 849.4 bits (2193), Expect = 1.3e-242
Identity = 394/395 (99.75%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. NCBI nr
Match: XP_022957852.1 (F-box protein At2g32560-like [Cucurbita moschata] >XP_022957853.1 F-box protein At2g32560-like [Cucurbita moschata])

HSP 1 Score: 844.0 bits (2179), Expect = 5.4e-241
Identity = 391/395 (98.99%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYG VGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGAVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCS +EISMWKQLWPTDILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSDQEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. NCBI nr
Match: XP_023532383.1 (F-box protein At2g32560-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 843.6 bits (2178), Expect = 7.0e-241
Identity = 391/395 (98.99%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFF IYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFTIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASR GASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRAGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQW+RLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWQRLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. NCBI nr
Match: XP_022995101.1 (F-box protein At2g32560-like [Cucurbita maxima] >XP_022995102.1 F-box protein At2g32560-like [Cucurbita maxima])

HSP 1 Score: 833.2 bits (2151), Expect = 9.5e-238
Identity = 387/395 (97.97%), Postives = 390/395 (98.73%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLE ILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLEGILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISD LWEKHIQRKWGKVIGQAAYREWQWYLASR GASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDRLWEKHIQRKWGKVIGQAAYREWQWYLASRAGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCD NATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDGNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNE+DGFYGGIRKLCS +EISMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLCSDQEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. ExPASy Swiss-Prot
Match: Q8RY82 (F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 6.2e-131
Identity = 239/397 (60.20%), Postives = 276/397 (69.52%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLL F +TCLSF  F KSL L P   WA E + L       LSF+ I     N+L     
Sbjct: 1   MLLYFLITCLSFFFFTKSLSLPP---WASETKTL-------LSFYFIKNPFMNTL----- 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
                   K    S + +     +MSVLDLPEL L+CIL+ LPP  LCSMA VCSSLRE+
Sbjct: 61  -----HQTKHDPASPVID-----QMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVG--ASNLKQNKQKSIIRLLSFGWSL 180
           C+SDHLWEKH++ KWGK++G AA+REWQ Y++S      S   Q       +++S   SL
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPAAHREWQCYISSSTYHLDSPHHQTGNLGFAKIISLIRSL 180

Query: 181 SWIRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLC 240
           S +  +        +SLP+DS MS YL+LETGRFWFPAQVYNRENGHVGFMLSCYDA+L 
Sbjct: 181 SSVFREDKQRRGYASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELS 240

Query: 241 YDPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEI 300
           YD HTDTFQARYPPHGRRA AIE GV W+R+RA PID  PH LH+SD L EL PGDHIEI
Sbjct: 241 YDTHTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKPGDHIEI 300

Query: 301 QWRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKD 360
           QWR+NKEFPYGWWYG+V HLE+CD +  HC CH SETVVLEFNQYT GSRWR   I R D
Sbjct: 301 QWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGSRWRRTMIMR-D 360

Query: 361 HREEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           H+EEGNE DGFYGGIRKL   EEI+MWK+ WP  ILE
Sbjct: 361 HKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371

[Close]

BLAST of Carg02678-RA vs. ExPASy Swiss-Prot
Match: Q6NLB1 (F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 4.4e-129
Identity = 225/396 (56.82%), Postives = 279/396 (70.45%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLL   +TCLSF  F KSL     P WA + + L       LSF+    +  NSL     
Sbjct: 1   MLLYLLITCLSFFFFSKSL---SFPQWASKTKNL-------LSFYFSKYLFTNSLHQITP 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
            + S +                 +MS+LDLP+L L+CILE LPP  LC+MA VCSSLRE+
Sbjct: 61  DLASPVL---------------GKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGA-SNLKQNKQKSIIRLLSFGWSLS 180
           C+SDHLWEKH++ KWGK++G +A++EWQ YL+S     S   +     + +++S   SLS
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLS 180

Query: 181 WIRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCY 240
            I    +      +S+P+DS M++YL+LETGRFWFPAQVYNRENGHVGFMLSCYDA+L Y
Sbjct: 181 SIFRDDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSY 240

Query: 241 DPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQ 300
           D  T+TFQARYPPHG+RAIA+E  V WER+RA P+D  PH+L++SD LNEL PGDHIEIQ
Sbjct: 241 DTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQ 300

Query: 301 WRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDH 360
           WR+NKEFPYGWWY VVGH+E+CD N  HC+CH SE +VLEFNQYT GSRWR   INR+DH
Sbjct: 301 WRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRDH 360

Query: 361 REEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           RE+GNE DGFYGGIRK+   E+I MWK+LWP+ ILE
Sbjct: 361 REKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371

[Close]

BLAST of Carg02678-RA vs. ExPASy Swiss-Prot
Match: Q6NKN8 (F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.7e-109
Identity = 182/337 (54.01%), Postives = 238/337 (70.62%), Query Frame = 0


Query: 66  MSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREKCISDH 125
           ++ +K+   K +N E+ ++MS+LDLP+L L+CILE+L P  LC+M  VCS LR+KC+SDH
Sbjct: 38  LTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDH 97

Query: 126 LWEKHIQRKWGKVIGQAAYREWQWYLASRV-----GASNLKQNKQKSIIRLLSFGWSLSW 185
           LWEKH++ KWG+++G AA +EW+ ++A+ +      +S+ +++K     R ++     +W
Sbjct: 98  LWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAW 157

Query: 186 IRSKANDNNTQRNS--LPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLC 245
           + S     N   +S   P+DS+M WY  LE G+FWFPAQVYNRENGHVGFM+SCYDAK+ 
Sbjct: 158 LSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIR 217

Query: 246 YDPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEI 305
           YD  TDTFQARY  HGRR  A E  V W+RLR    DT   DLH+SDCL+ L PGDH EI
Sbjct: 218 YDFKTDTFQARYSAHGRR--AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEI 277

Query: 306 QWRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKD 365
           QWR+ KEFPYGWW+G+VGHL+ CD    +CRC   E VV+EF Q+ P S WR   I RKD
Sbjct: 278 QWRRTKEFPYGWWFGIVGHLQNCD-GVQNCRCDSDENVVMEFRQFRPESPWRRTVIKRKD 337

Query: 366 HREEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           HRE GNE +GFYGG++KL + EEIS WKQLWP+  LE
Sbjct: 338 HRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE 371

[Close]

BLAST of Carg02678-RA vs. ExPASy TrEMBL
Match: A0A6J1H1F7 (F-box protein At2g32560-like OS=Cucurbita moschata OX=3662 GN=LOC111459268 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 2.6e-241
Identity = 391/395 (98.99%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYG VGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGAVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCS +EISMWKQLWPTDILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSDQEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. ExPASy TrEMBL
Match: A0A6J1K130 (F-box protein At2g32560-like OS=Cucurbita maxima OX=3661 GN=LOC111490745 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 4.6e-238
Identity = 387/395 (97.97%), Postives = 390/395 (98.73%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF
Sbjct: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLE ILERLPPGALCSMAGVCSSLRE+
Sbjct: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLEGILERLPPGALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISD LWEKHIQRKWGKVIGQAAYREWQWYLASR GASNLKQNKQKSIIRLLSFGWSLSW
Sbjct: 121 CISDRLWEKHIQRKWGKVIGQAAYREWQWYLASRAGASNLKQNKQKSIIRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD
Sbjct: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW
Sbjct: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCD NATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDGNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNE+DGFYGGIRKLCS +EISMWKQLWPTDILE
Sbjct: 361 EEGNEIDGFYGGIRKLCSDQEISMWKQLWPTDILE 395

[Close]

BLAST of Carg02678-RA vs. ExPASy TrEMBL
Match: A0A6J1DHU6 (F-box protein At2g26850 OS=Momordica charantia OX=3673 GN=LOC111020636 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 2.6e-217
Identity = 346/395 (87.59%), Postives = 371/395 (93.92%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFF+ C+SF+LF+KSLPLKPLPLWA EMR L HW WKELSF  I KVIKNSLCT+LF
Sbjct: 1   MLLCFFIACISFILFLKSLPLKPLPLWADEMRFLSHWLWKELSFLLICKVIKNSLCTFLF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
           SIPS+MSLKK+YL K+ENVEEN EMSVLDLPEL LECILERLPP ALCSMAGVCSSLRE+
Sbjct: 61  SIPSKMSLKKRYLPKVENVEENGEMSVLDLPELALECILERLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKH++RKWGKVIGQAAYREWQW+LASR G +NLKQ+KQKS++RLLSFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGLNNLKQSKQKSLLRLLSFGWSLSW 180

Query: 181 IRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCYD 240
           IRSKANDNN+ RNSLPVDSIM+WYLALETG FWFPAQVYNRENGHVGFMLSCYDA+LCYD
Sbjct: 181 IRSKANDNNSPRNSLPVDSIMAWYLALETGNFWFPAQVYNRENGHVGFMLSCYDAELCYD 240

Query: 241 PHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQW 300
           P TDTFQARYPPHGRRAIA ENGVQWERLRAPP+DTPPHDLHISD LNELCPGDHIEIQW
Sbjct: 241 PRTDTFQARYPPHGRRAIATENGVQWERLRAPPVDTPPHDLHISDSLNELCPGDHIEIQW 300

Query: 301 RKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDHR 360
           RKNKEFPYGWWYGVVGHLETCD NA HCRCHYS+TVVLEFNQYTPGSRWRLA ++RKDHR
Sbjct: 301 RKNKEFPYGWWYGVVGHLETCDGNANHCRCHYSDTVVLEFNQYTPGSRWRLATVDRKDHR 360

Query: 361 EEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           EEGNEVDGFYGGIRKLCS EE SMWK+LWP+DILE
Sbjct: 361 EEGNEVDGFYGGIRKLCSDEETSMWKRLWPSDILE 395

[Close]

BLAST of Carg02678-RA vs. ExPASy TrEMBL
Match: A0A1S3BN51 (F-box protein At2g32560 OS=Cucumis melo OX=3656 GN=LOC103491462 PE=4 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.5e-215
Identity = 347/396 (87.63%), Postives = 369/396 (93.18%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTC+SF+LF+KSL LKPLPLWA EMR L HWFWKELS FPIYKVIKNSLCTY F
Sbjct: 1   MLLCFFLTCISFILFLKSLSLKPLPLWADEMRFLSHWFWKELSLFPIYKVIKNSLCTYTF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
            I S+MS KKKYLSK+ENVEE++EMSVLDLPEL LECILE+LPP ALCSMAGVCSSLRE+
Sbjct: 61  CISSKMSFKKKYLSKVENVEESAEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKH++RKWGKVIGQAAYREWQW+LASR G SNLKQNKQKS+IRL SFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSW 180

Query: 181 IRSKAND-NNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCY 240
           IRSK ND NNT RN LPVDSIM+WYLALETGRFWFPAQVYNRENGHVGFMLSCYDA+LCY
Sbjct: 181 IRSKVNDNNNTPRNFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCY 240

Query: 241 DPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQ 300
           D  TDTFQARYPPHGRRAIAIENGVQWERLR+PPIDTPPHDLH+SDCLNELCPGDHIEIQ
Sbjct: 241 DLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELCPGDHIEIQ 300

Query: 301 WRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDH 360
           WRKNK+FPYGWWYGVVGHLETCD +A HC CHYS+TVVLEFNQYTPGSRWRLA I+RKDH
Sbjct: 301 WRKNKDFPYGWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDH 360

Query: 361 REEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           REEGNEVDGFYGGIRKL S EEIS WKQLWPTD+LE
Sbjct: 361 REEGNEVDGFYGGIRKLYSDEEISTWKQLWPTDVLE 396

[Close]

BLAST of Carg02678-RA vs. ExPASy TrEMBL
Match: A0A0A0KK05 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430140 PE=4 SV=1)

HSP 1 Score: 754.6 bits (1947), Expect = 2.1e-214
Identity = 347/396 (87.63%), Postives = 368/396 (92.93%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLLCFFLTC+SF+LF+KSL LKPLPLWA EMR L HWFWKELSFFPIYKVIKNSLCTY F
Sbjct: 1   MLLCFFLTCISFILFLKSLSLKPLPLWADEMRFLSHWFWKELSFFPIYKVIKNSLCTYTF 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
            I S+MS KKKYLSK+ENVEE+ EMSVLDLPEL LECILE+LPP ALCSMAGVCSSLRE+
Sbjct: 61  CISSKMSFKKKYLSKVENVEESGEMSVLDLPELALECILEKLPPDALCSMAGVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGASNLKQNKQKSIIRLLSFGWSLSW 180
           CISDHLWEKH++RKWGKVIGQAAYREWQW+LASR G SNLKQNKQKS+IRL SFGWSLSW
Sbjct: 121 CISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGESNLKQNKQKSLIRLFSFGWSLSW 180

Query: 181 IRSKANDN-NTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCY 240
           IRSK N+N NT R  LPVDSIM+WYLALETGRFWFPAQVYNRENGHVGFMLSCYDA+LCY
Sbjct: 181 IRSKVNENSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELCY 240

Query: 241 DPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQ 300
           D  TDTFQARYPPHGRRAIAIENGVQWERLR+PPIDTPPHDLH+SDCLNEL PGDHIEIQ
Sbjct: 241 DLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTPPHDLHVSDCLNELWPGDHIEIQ 300

Query: 301 WRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDH 360
           WRKNK+FPYGWWYGVVGHLETCD +A HC CHYS+TVVLEFNQYTPGSRWRLA I+RKDH
Sbjct: 301 WRKNKDFPYGWWYGVVGHLETCDGDANHCSCHYSDTVVLEFNQYTPGSRWRLAIIDRKDH 360

Query: 361 REEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           REEGNEVDGFYGGIRKL S EEISMWKQLWPTDILE
Sbjct: 361 REEGNEVDGFYGGIRKLYSNEEISMWKQLWPTDILE 396

[Close]

BLAST of Carg02678-RA vs. TAIR 10
Match: AT2G32560.1 (F-box family protein )

HSP 1 Score: 468.8 bits (1205), Expect = 4.4e-132
Identity = 239/397 (60.20%), Postives = 276/397 (69.52%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLL F +TCLSF  F KSL L P   WA E + L       LSF+ I     N+L     
Sbjct: 1   MLLYFLITCLSFFFFTKSLSLPP---WASETKTL-------LSFYFIKNPFMNTL----- 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
                   K    S + +     +MSVLDLPEL L+CIL+ LPP  LCSMA VCSSLRE+
Sbjct: 61  -----HQTKHDPASPVID-----QMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVG--ASNLKQNKQKSIIRLLSFGWSL 180
           C+SDHLWEKH++ KWGK++G AA+REWQ Y++S      S   Q       +++S   SL
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPAAHREWQCYISSSTYHLDSPHHQTGNLGFAKIISLIRSL 180

Query: 181 SWIRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLC 240
           S +  +        +SLP+DS MS YL+LETGRFWFPAQVYNRENGHVGFMLSCYDA+L 
Sbjct: 181 SSVFREDKQRRGYASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELS 240

Query: 241 YDPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEI 300
           YD HTDTFQARYPPHGRRA AIE GV W+R+RA PID  PH LH+SD L EL PGDHIEI
Sbjct: 241 YDTHTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKPGDHIEI 300

Query: 301 QWRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKD 360
           QWR+NKEFPYGWWYG+V HLE+CD +  HC CH SETVVLEFNQYT GSRWR   I R D
Sbjct: 301 QWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGSRWRRTMIMR-D 360

Query: 361 HREEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           H+EEGNE DGFYGGIRKL   EEI+MWK+ WP  ILE
Sbjct: 361 HKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371

[Close]

BLAST of Carg02678-RA vs. TAIR 10
Match: AT2G26850.1 (F-box family protein )

HSP 1 Score: 462.6 bits (1189), Expect = 3.1e-130
Identity = 225/396 (56.82%), Postives = 279/396 (70.45%), Query Frame = 0


Query: 1   MLLCFFLTCLSFLLFIKSLPLKPLPLWAYEMRLLPHWFWKELSFFPIYKVIKNSLCTYLF 60
           MLL   +TCLSF  F KSL     P WA + + L       LSF+    +  NSL     
Sbjct: 1   MLLYLLITCLSFFFFSKSL---SFPQWASKTKNL-------LSFYFSKYLFTNSLHQITP 60

Query: 61  SIPSRMSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREK 120
            + S +                 +MS+LDLP+L L+CILE LPP  LC+MA VCSSLRE+
Sbjct: 61  DLASPVL---------------GKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRER 120

Query: 121 CISDHLWEKHIQRKWGKVIGQAAYREWQWYLASRVGA-SNLKQNKQKSIIRLLSFGWSLS 180
           C+SDHLWEKH++ KWGK++G +A++EWQ YL+S     S   +     + +++S   SLS
Sbjct: 121 CVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGLAKIISLMRSLS 180

Query: 181 WIRSKANDNNTQRNSLPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLCY 240
            I    +      +S+P+DS M++YL+LETGRFWFPAQVYNRENGHVGFMLSCYDA+L Y
Sbjct: 181 SIFRDDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSY 240

Query: 241 DPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEIQ 300
           D  T+TFQARYPPHG+RAIA+E  V WER+RA P+D  PH+L++SD LNEL PGDHIEIQ
Sbjct: 241 DTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQ 300

Query: 301 WRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKDH 360
           WR+NKEFPYGWWY VVGH+E+CD N  HC+CH SE +VLEFNQYT GSRWR   INR+DH
Sbjct: 301 WRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRDH 360

Query: 361 REEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           RE+GNE DGFYGGIRK+   E+I MWK+LWP+ ILE
Sbjct: 361 REKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371

[Close]

BLAST of Carg02678-RA vs. TAIR 10
Match: AT2G41170.1 (F-box family protein )

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-110
Identity = 182/337 (54.01%), Postives = 238/337 (70.62%), Query Frame = 0


Query: 66  MSLKKKYLSKIENVEENSEMSVLDLPELVLECILERLPPGALCSMAGVCSSLREKCISDH 125
           ++ +K+   K +N E+ ++MS+LDLP+L L+CILE+L P  LC+M  VCS LR+KC+SDH
Sbjct: 38  LTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDH 97

Query: 126 LWEKHIQRKWGKVIGQAAYREWQWYLASRV-----GASNLKQNKQKSIIRLLSFGWSLSW 185
           LWEKH++ KWG+++G AA +EW+ ++A+ +      +S+ +++K     R ++     +W
Sbjct: 98  LWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAW 157

Query: 186 IRSKANDNNTQRNS--LPVDSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAKLC 245
           + S     N   +S   P+DS+M WY  LE G+FWFPAQVYNRENGHVGFM+SCYDAK+ 
Sbjct: 158 LSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIR 217

Query: 246 YDPHTDTFQARYPPHGRRAIAIENGVQWERLRAPPIDTPPHDLHISDCLNELCPGDHIEI 305
           YD  TDTFQARY  HGRR  A E  V W+RLR    DT   DLH+SDCL+ L PGDH EI
Sbjct: 218 YDFKTDTFQARYSAHGRR--AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEI 277

Query: 306 QWRKNKEFPYGWWYGVVGHLETCDRNATHCRCHYSETVVLEFNQYTPGSRWRLAAINRKD 365
           QWR+ KEFPYGWW+G+VGHL+ CD    +CRC   E VV+EF Q+ P S WR   I RKD
Sbjct: 278 QWRRTKEFPYGWWFGIVGHLQNCD-GVQNCRCDSDENVVMEFRQFRPESPWRRTVIKRKD 337

Query: 366 HREEGNEVDGFYGGIRKLCSGEEISMWKQLWPTDILE 396
           HRE GNE +GFYGG++KL + EEIS WKQLWP+  LE
Sbjct: 338 HRETGNEENGFYGGVKKLGTEEEISTWKQLWPSQALE 371

The following BLAST results are available for this feature:

BLAST of Carg02678-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035894.1	5.8e-243	100.00	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605948.1	1.3e-242	99.75	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022957852.1	5.4e-241	98.99	F-box protein At2g32560-like [Cucurbita moschata] >XP_022957853.1 F-box protein ...	[more]
XP_023532383.1	7.0e-241	98.99	F-box protein At2g32560-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995101.1	9.5e-238	97.97	F-box protein At2g32560-like [Cucurbita maxima] >XP_022995102.1 F-box protein At...	[more]

BLAST of Carg02678-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY82	6.2e-131	60.20	F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1	[more]
Q6NLB1	4.4e-129	56.82	F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1	[more]
Q6NKN8	1.7e-109	54.01	F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1	[more]

BLAST of Carg02678-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1F7	2.6e-241	98.99	F-box protein At2g32560-like OS=Cucurbita moschata OX=3662 GN=LOC111459268 PE=4 ...	[more]
A0A6J1K130	4.6e-238	97.97	F-box protein At2g32560-like OS=Cucurbita maxima OX=3661 GN=LOC111490745 PE=4 SV...	[more]
A0A6J1DHU6	2.6e-217	87.59	F-box protein At2g26850 OS=Momordica charantia OX=3673 GN=LOC111020636 PE=4 SV=1	[more]
A0A1S3BN51	2.5e-215	87.63	F-box protein At2g32560 OS=Cucumis melo OX=3656 GN=LOC103491462 PE=4 SV=1	[more]
A0A0A0KK05	2.1e-214	87.63	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430140 PE=4 ...	[more]

BLAST of Carg02678-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32560.1	4.4e-132	60.20	F-box family protein	[more]
AT2G26850.1	3.1e-130	56.82	F-box family protein	[more]
AT2G41170.1	1.2e-110	54.01	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 90..130 e-value: 7.0E-6 score: 35.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 85..131 e-value: 1.6E-8 score: 34.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 84..130 score: 10.583739
None	No IPR available	GENE3D	1.20.1280.50		coord: 72..170 e-value: 1.5E-7 score: 33.2
None	No IPR available	PANTHER	PTHR31482:SF2	ESTS AU081301(E20138)	coord: 3..395
None	No IPR available	PANTHER	PTHR31482	ESTS AU081301(E20138)	coord: 3..395
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 80..138

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg02678	Carg02678	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02678-RA:5	Carg02678-RA:5	exon
Carg02678-RA:4	Carg02678-RA:4	exon
Carg02678-RA:3	Carg02678-RA:3	exon
Carg02678-RA:2	Carg02678-RA:2	exon
Carg02678-RA:1	Carg02678-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02678-RA:cds	Carg02678-RA:cds	CDS
Carg02678-RA:cds	Carg02678-RA:cds_2	CDS
Carg02678-RA:cds	Carg02678-RA:cds_3	CDS
Carg02678-RA:cds	Carg02678-RA:cds_4	CDS
Carg02678-RA:cds	Carg02678-RA:cds_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02678-RA:three_prime_utr	Carg02678-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg02678-RA	Carg02678-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding