Carg02258-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02258-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	homeobox-leucine zipper protein ATHB-20-like
Location	Carg_Chr15: 1511662 .. 1512822 (+)
Sequence length	927
RNA-Seq Expression	Carg02258-RA
Synteny	Carg02258-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATTTCCATCCCCATGGCTTCCCCTCACCATTCCCATAGCTTCCTCTTCCAATCCCGTCCCGCCGATCACCACGAATACCTTCCCTCAGCTTCCTTCAACGCCATCCCCTCCTGCCCTCCTCACCTCTACTTCCACGGTTTCTCTCCTCCTCTTCCTTCTCCCTCCACTCGCATACAAATTACACGACCGGGTTTTGATTGTTTTTGTTCGGTTTTGCAGATGGGGTCGTCCCGGTGATGATGAAGAGATCGATGTCGTTTTCAGGCATCGAAAATGGATGCGAGGAAATGAACGGCGACGAGGGGCTATCGGACGATGGATTGGCGTTGGGAGAGAAGAAGAAGCGCCTTAATTTAGAGCAAGTGAAGGCTTTGGAGAAGAGCTTTGAGCTGGGGAATAAGCTTGAGCCTGAGAGAAAGATTCAACTGGCCAAAGCCTTGGGGTTGCAGCCAAGACAGGTTGCTATTTGGTTCCAGAACAGAAGAGCCAGATGGAAGACCAAGCAGCTGGAAAGAGATTATGAGGTCTTGAAGAAACACTTTGAATCTCTTAAGGCTGACAATGATGTCCTCCAAGCTCAAAACACCAAACTCCATGCAGAGGTAAAAAATAATAATAATAATAATAAAGATAATTTCATAGTTTTTAAATATTGTTCTTATTAAAATAAAATAAAATAAAATAATTAAATTAAAATGAATAATTTCAAGTGTGACGTTGGTTAATTAAGGGAATGATTTTGTTTTTCGGCAGTTATTAGCGTTAAAAACCAAGGACTCCGGTGAGGTGGCAGGCGGCGGGGCCACCATGAACCTAAAGAAAGAAAACGAACGGTGTTGGAGCAGCGACAACAGTTGTGACATCAACCTGGACATCTCAAAGACACAAGCAGCAATAAACGGCGGGGAAGGTGGAAGAGCATGTTGTGAACCAGGGATCAAAGACCTATTCCCATCGGCGGCGTTCGGATCGGGTGCCATAACGCAGCTGATTCAACGCGGGTCATCCAGGTCAACGGTTGACCATCCTCAAGTAATTCAAGAAGAAAGCTTCTCTCAAATGTTCAATGGTATTGAAGAACAACAACAAAGTGCAGCAGCAGCAGCAGCAGCTGGGTTTTGGCCATGGGGTTCGGATCAAAATTCCCATTTTAATTAA

mRNA sequence

TGCATTTCCATCCCCATGGCTTCCCCTCACCATTCCCATAGCTTCCTCTTCCAATCCCGTCCCGCCGATCACCACGAATACCTTCCCTCAGCTTCCTTCAACGCCATCCCCTCCTGCCCTCCTCACCTCTACTTCCACGATGGGGTCGTCCCGGTGATGATGAAGAGATCGATGTCGTTTTCAGGCATCGAAAATGGATGCGAGGAAATGAACGGCGACGAGGGGCTATCGGACGATGGATTGGCGTTGGGAGAGAAGAAGAAGCGCCTTAATTTAGAGCAAGTGAAGGCTTTGGAGAAGAGCTTTGAGCTGGGGAATAAGCTTGAGCCTGAGAGAAAGATTCAACTGGCCAAAGCCTTGGGGTTGCAGCCAAGACAGGTTGCTATTTGGTTCCAGAACAGAAGAGCCAGATGGAAGACCAAGCAGCTGGAAAGAGATTATGAGGTCTTGAAGAAACACTTTGAATCTCTTAAGGCTGACAATGATGTCCTCCAAGCTCAAAACACCAAACTCCATGCAGAGTTATTAGCGTTAAAAACCAAGGACTCCGGTGAGGTGGCAGGCGGCGGGGCCACCATGAACCTAAAGAAAGAAAACGAACGGTGTTGGAGCAGCGACAACAGTTGTGACATCAACCTGGACATCTCAAAGACACAAGCAGCAATAAACGGCGGGGAAGGTGGAAGAGCATGTTGTGAACCAGGGATCAAAGACCTATTCCCATCGGCGGCGTTCGGATCGGGTGCCATAACGCAGCTGATTCAACGCGGGTCATCCAGGTCAACGGTTGACCATCCTCAAGTAATTCAAGAAGAAAGCTTCTCTCAAATGTTCAATGGTATTGAAGAACAACAACAAAGTGCAGCAGCAGCAGCAGCAGCTGGGTTTTGGCCATGGGGTTCGGATCAAAATTCCCATTTTAATTAA

Coding sequence (CDS)

TGCATTTCCATCCCCATGGCTTCCCCTCACCATTCCCATAGCTTCCTCTTCCAATCCCGTCCCGCCGATCACCACGAATACCTTCCCTCAGCTTCCTTCAACGCCATCCCCTCCTGCCCTCCTCACCTCTACTTCCACGATGGGGTCGTCCCGGTGATGATGAAGAGATCGATGTCGTTTTCAGGCATCGAAAATGGATGCGAGGAAATGAACGGCGACGAGGGGCTATCGGACGATGGATTGGCGTTGGGAGAGAAGAAGAAGCGCCTTAATTTAGAGCAAGTGAAGGCTTTGGAGAAGAGCTTTGAGCTGGGGAATAAGCTTGAGCCTGAGAGAAAGATTCAACTGGCCAAAGCCTTGGGGTTGCAGCCAAGACAGGTTGCTATTTGGTTCCAGAACAGAAGAGCCAGATGGAAGACCAAGCAGCTGGAAAGAGATTATGAGGTCTTGAAGAAACACTTTGAATCTCTTAAGGCTGACAATGATGTCCTCCAAGCTCAAAACACCAAACTCCATGCAGAGTTATTAGCGTTAAAAACCAAGGACTCCGGTGAGGTGGCAGGCGGCGGGGCCACCATGAACCTAAAGAAAGAAAACGAACGGTGTTGGAGCAGCGACAACAGTTGTGACATCAACCTGGACATCTCAAAGACACAAGCAGCAATAAACGGCGGGGAAGGTGGAAGAGCATGTTGTGAACCAGGGATCAAAGACCTATTCCCATCGGCGGCGTTCGGATCGGGTGCCATAACGCAGCTGATTCAACGCGGGTCATCCAGGTCAACGGTTGACCATCCTCAAGTAATTCAAGAAGAAAGCTTCTCTCAAATGTTCAATGGTATTGAAGAACAACAACAAAGTGCAGCAGCAGCAGCAGCAGCTGGGTTTTGGCCATGGGGTTCGGATCAAAATTCCCATTTTAATTAA

Protein sequence

CISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGEVAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNSHFN

Homology

[Close]

BLAST of Carg02258-RA vs. NCBI nr
Match: KAG7016146.1 (Homeobox-leucine zipper protein HAT7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618.2 bits (1593), Expect = 3.8e-173
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   CISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSF 60
           CISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSF
Sbjct: 1   CISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSF 60

Query: 61  SGIENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKAL 120
           SGIENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKAL
Sbjct: 61  SGIENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKAL 120

Query: 121 GLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKT 180
           GLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKT
Sbjct: 121 GLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKT 180

Query: 181 KDSGEVAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLF 240
           KDSGEVAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLF
Sbjct: 181 KDSGEVAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLF 240

Query: 241 PSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG 300
           PSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG
Sbjct: 241 PSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG 300

Query: 301 SDQNSHFN 309
           SDQNSHFN
Sbjct: 301 SDQNSHFN 308

[Close]

BLAST of Carg02258-RA vs. NCBI nr
Match: XP_022938977.1 (homeobox-leucine zipper protein ATHB-20-like [Cucurbita moschata])

HSP 1 Score: 602.4 bits (1552), Expect = 2.1e-168
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN
Sbjct: 1   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS-AAAAAAAGFWPWGSDQN 305
           GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS AAAAAAAGFWPWGSDQN
Sbjct: 241 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAAGFWPWGSDQN 300

Query: 306 SHFN 309
           SHFN
Sbjct: 301 SHFN 304

[Close]

BLAST of Carg02258-RA vs. NCBI nr
Match: KAG6578593.1 (Homeobox-leucine zipper protein HAT7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 597.8 bits (1540), Expect = 5.2e-167
Identity = 301/304 (99.01%), Postives = 302/304 (99.34%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN
Sbjct: 1   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEE+NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS-AAAAAAAGFWPWGSDQN 305
            SGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS AAAAAAAGFWPWGSDQN
Sbjct: 241 RSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAAGFWPWGSDQN 300

Query: 306 SHFN 309
           SHFN
Sbjct: 301 SHFN 304

[Close]

BLAST of Carg02258-RA vs. NCBI nr
Match: XP_023551483.1 (homeobox-leucine zipper protein ATHB-20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596.3 bits (1536), Expect = 1.5e-166
Identity = 299/303 (98.68%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSR ADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN
Sbjct: 1   MASPHHSHSFLFQSRSADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEE+NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAING EGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGEEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNS 305
            SGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNS
Sbjct: 241 RSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNS 300

Query: 306 HFN 309
           HFN
Sbjct: 301 HFN 303

[Close]

BLAST of Carg02258-RA vs. NCBI nr
Match: XP_022993652.1 (homeobox-leucine zipper protein ATHB-20-like [Cucurbita maxima])

HSP 1 Score: 587.0 bits (1512), Expect = 9.3e-164
Identity = 292/303 (96.37%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGV+PVMMKRSMSFSG+EN
Sbjct: 1   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVIPVMMKRSMSFSGVEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEE+NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQN+KLHA+LLALKTKD+GE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNSKLHAQLLALKTKDTGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNS 305
            SGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQ+  AAAAAGFWPWGSDQ+S
Sbjct: 241 RSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQT--AAAAAGFWPWGSDQSS 300

Query: 306 HFN 309
           HFN
Sbjct: 301 HFN 301

[Close]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot
Match: Q00466 (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=2 SV=4)

HSP 1 Score: 235.3 bits (599), Expect = 9.0e-61
Identity = 154/328 (46.95%), Postives = 196/328 (59.76%), Query Frame = 0


Query: 2   ISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFS 61
           + + MA P   H F+FQ    D+  +LPS +  ++PSCPPHL F+ G    MM RSMSF+
Sbjct: 18  LRLEMAFP--QHGFMFQQLHEDNAHHLPSPT--SLPSCPPHL-FYGGGGNYMMNRSMSFT 77

Query: 62  GIE----------------NGCEEMNGDEGLSDDG--LALGEKKKRLNLEQVKALEKSFE 121
           G+                 N  +++  ++ LSDDG  + LGEKKKRLNLEQV+ALEKSFE
Sbjct: 78  GVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFE 137

Query: 122 LGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDV 181
           LGNKLEPERK+QLAKALGLQPRQ+AIWFQNRRARWKTKQLERDY+ LKK F+ LK+DND 
Sbjct: 138 LGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDS 197

Query: 182 LQAQNTKLHAELLALKTKDSGEVAGGGATMNLKKE-NERCWSSDNSCDINLDISKTQAAI 241
           L A N KLHAEL+ALK  D  E A       +K+E  E  WS++ S + N          
Sbjct: 198 LLAHNKKLHAELVALKKHDRKESA------KIKREFAEASWSNNGSTENN---------- 257

Query: 242 NGGEGGRACCEPGIKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQVI--QEESFSQMFNG 301
           +      A     IKDLFPS+   + A T       + + +DH Q++  Q++ F  MFNG
Sbjct: 258 HNNNSSDANHVSMIKDLFPSSIRSATATT-------TSTHIDH-QIVQDQDQGFCNMFNG 309

Query: 302 IEEQQQSAAAAAAAGFWPWGSDQNSHFN 309
           I+E         +A +W W   Q  H N
Sbjct: 318 IDE-------TTSASYWAWPDQQQQHHN 309

[Close]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot
Match: Q8LAT0 (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana OX=3702 GN=ATHB-20 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.8e-59
Identity = 151/314 (48.09%), Postives = 186/314 (59.24%), Query Frame = 0


Query: 2   ISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFS 61
           + + MA P   H F+FQ    D+       S + +PSCPPHL+  +G    MM RSMS  
Sbjct: 12  LRLEMAFP--QHGFMFQQLHEDN-------SQDQLPSCPPHLF--NGGGNYMMNRSMSLM 71

Query: 62  GIENGCEEMNGDEGLSDDG--LALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKA 121
            ++    +   +E LSDDG    LGEKKKRL LEQVKALEKSFELGNKLEPERKIQLAKA
Sbjct: 72  NVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKA 131

Query: 122 LGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALK 181
           LG+QPRQ+AIWFQNRRARWKT+QLERDY+ LKK FESLK+DN  L A N KL AE++ALK
Sbjct: 132 LGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 191

Query: 182 TKDSGEVAGGGATMNLKKENERCW----SSDNSCDINLDISKTQAAINGGEGGRACCEPG 241
            K+  E   G     +K+E E  W    S++NS DINL++ +     +            
Sbjct: 192 NKECNE---GNI---VKREAEASWSNNGSTENSSDINLEMPRETITTHVNT--------- 251

Query: 242 IKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQ---VIQEESFSQMFNGIEEQQQSAAAAA 301
           IKDLFPS+              SS    DH Q   ++QEES   MFNGI+E         
Sbjct: 252 IKDLFPSSI------------RSSAHDDDHHQNHEIVQEESLCNMFNGIDE-------TT 280

Query: 302 AAGFWPWGSDQNSH 307
            AG+W W    ++H
Sbjct: 312 PAGYWAWSDPNHNH 280

[Close]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot
Match: A2XD08 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=HOX21 PE=2 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 4.2e-50
Identity = 134/318 (42.14%), Postives = 181/318 (56.92%), Query Frame = 0


Query: 21  PADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIENGCEEMN--GDEGLSD 80
           P  H+ +LPS++      CP    F  G+ P++ KR MS+     G +E+N  G++ LSD
Sbjct: 63  PHPHNPFLPSSA-----QCPSLQEFR-GMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSD 122

Query: 81  DGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARW 140
           DG   GEKK+RLN+EQV+ LEK+FELGNKLEPERK+QLA+ALGLQPRQVAIWFQNRRARW
Sbjct: 123 DGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 182

Query: 141 KTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGEVAGGGATMNLKKE 200
           KTKQLE+DY+ LK+  +++KA+ND L   N KL AE++ALK +++         +NL KE
Sbjct: 183 KTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREA-----ASELINLNKE 242

Query: 201 NERCWS--SDNSCDINLDISKT----QAAIN-------------GGEGGRACCEPGIKDL 260
            E   S  S+NS +INLDIS+T     AA++             GG GG     P    +
Sbjct: 243 TEASCSNRSENSSEINLDISRTPPPDAAALDAAPTAHHHHHGGGGGGGGGGGMIPFYTSI 302

Query: 261 FPSAAFGSGAITQLIQR---GSSRSTVDH--------PQVIQEESFSQMFNGIEEQQQSA 307
              A+ G   I QL+     G+    ++H           +   SF  +  G++E     
Sbjct: 303 ARPASGGGVDIDQLLHSSSGGAGGPKMEHHGGGGNVQAASVDTASFGNLLCGVDEPPP-- 360

[Close]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot
Match: Q8LC03 (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-50
Identity = 134/305 (43.93%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 14  SFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRS--MSFSGIENGCEEMN 73
           +F+ Q+   D H +   +    +PSC      H G    + KRS       +E G   MN
Sbjct: 13  NFMIQTSYEDDHPHQSPSLAPLLPSCSLPQDLH-GFASFLGKRSPMEGCCDLETG-NNMN 72

Query: 74  GDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWF 133
           G+E  SDDG  +GEKK+RLN+EQVK LEK+FELGNKLEPERK+QLA+ALGLQPRQ+AIWF
Sbjct: 73  GEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWF 132

Query: 134 QNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGEVAGGGA 193
           QNRRARWKTKQLE+DY+ LK+ F++LKA+ND+LQ  N KL AE++ LK ++  E      
Sbjct: 133 QNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTE------ 192

Query: 194 TMNLKKENERCWS--SDNSCD-INLDIS----KTQAAINGGEG------GRACCEPGIKD 253
           ++NL KE E   S  SDNS D + LDIS       + + GG        GR    P    
Sbjct: 193 SINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPPS--- 252

Query: 254 LFPSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWP 304
             P+ A  +    Q  Q  SS  ++    V +E S S MF  +++          +GFWP
Sbjct: 253 --PATATTTTTTMQFFQNSSSGQSM----VKEENSISNMFCAMDDH---------SGFWP 291

[Close]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot
Match: Q8S7W9 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX21 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.3e-50
Identity = 137/337 (40.65%), Postives = 181/337 (53.71%), Query Frame = 0


Query: 10  HHSHSFLFQSRPADHHEYLPSASFNAIPSCP--------PHLYFHDGVVPVMMKRSMSFS 69
           HH H    Q +   HH   P       P  P        P L    G+ P++ KR MS+ 
Sbjct: 44  HHGHHHEQQQQQQHHHHLGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYG 103

Query: 70  GIENGCEEMN--GDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKA 129
               G +E+N  G++ LSDDG   GEKK+RLN+EQV+ LEK+FELGNKLEPERK+QLA+A
Sbjct: 104 DGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARA 163

Query: 130 LGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALK 189
           LGLQPRQVAIWFQNRRARWKTKQLE+DY+ LK+  +++KA+ND L   N KL AE++ALK
Sbjct: 164 LGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALK 223

Query: 190 TKDSGEVAGGGATMNLKKENERCWS--SDNSCDINLDISKT----QAAIN---------- 249
            +++         +NL KE E   S  S+NS +INLDIS+T     AA++          
Sbjct: 224 GREA-----ASELINLNKETEASCSNRSENSSEINLDISRTPPPDAAALDTAPTAHHHHH 283

Query: 250 ---GGEGGRACCEPGIKDLFPSAAFGSGAITQLIQR---GSSRSTVDH--------PQVI 307
              GG GG     P    +   A+ G   I QL+     G+    ++H           +
Sbjct: 284 GGGGGGGGGGGMIPFYTSIARPASGGGVDIDQLLHSSSGGAGGPKMEHHGGGGNVQAASV 343

[Close]

BLAST of Carg02258-RA vs. ExPASy TrEMBL
Match: A0A6J1FFJ1 (homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita moschata OX=3662 GN=LOC111445023 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.0e-168
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN
Sbjct: 1   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS-AAAAAAAGFWPWGSDQN 305
           GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQS AAAAAAAGFWPWGSDQN
Sbjct: 241 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAAGFWPWGSDQN 300

Query: 306 SHFN 309
           SHFN
Sbjct: 301 SHFN 304

[Close]

BLAST of Carg02258-RA vs. ExPASy TrEMBL
Match: A0A6J1JTG1 (homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita maxima OX=3661 GN=LOC111489580 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.5e-164
Identity = 292/303 (96.37%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGIEN 65
           MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGV+PVMMKRSMSFSG+EN
Sbjct: 1   MASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVIPVMMKRSMSFSGVEN 60

Query: 66  GCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 125
           GCEE+NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR
Sbjct: 61  GCEEVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPR 120

Query: 126 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGE 185
           QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQN+KLHA+LLALKTKD+GE
Sbjct: 121 QVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNSKLHAQLLALKTKDTGE 180

Query: 186 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 245
           VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF
Sbjct: 181 VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPGIKDLFPSAAF 240

Query: 246 GSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWGSDQNS 305
            SGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQ+  AAAAAGFWPWGSDQ+S
Sbjct: 241 RSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQT--AAAAAGFWPWGSDQSS 300

Query: 306 HFN 309
           HFN
Sbjct: 301 HFN 301

[Close]

BLAST of Carg02258-RA vs. ExPASy TrEMBL
Match: A0A1S3C9V4 (homeobox-leucine zipper protein ATHB-20-like OS=Cucumis melo OX=3656 GN=LOC103498474 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.2e-146
Identity = 274/308 (88.96%), Postives = 287/308 (93.18%), Query Frame = 0


Query: 6   MASP-HHSHSFLFQSRPA-DHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGI 65
           MASP HHSHSF+FQSRPA DHHEY+PSASFN IPSCPPHLYFHDGVVPVMMKRSMSFSG+
Sbjct: 1   MASPHHHSHSFMFQSRPAPDHHEYVPSASFNTIPSCPPHLYFHDGVVPVMMKRSMSFSGV 60

Query: 66  ENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQ 125
           ENGCE++NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFE+GNKLEPERK+QLAKALGLQ
Sbjct: 61  ENGCEDVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQ 120

Query: 126 PRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDS 185
           PRQ+AIWFQNRRARWKTKQLERDYEVLKK FE+LKADNDVLQAQNTKLHAELLALKTKDS
Sbjct: 121 PRQIAIWFQNRRARWKTKQLERDYEVLKKQFEALKADNDVLQAQNTKLHAELLALKTKDS 180

Query: 186 GE-VAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPG-IKDLFP 245
           GE V GGGATMNLKKENERCWSSDNSCDINLDIS TQ  I GG GGRAC +PG IKDLFP
Sbjct: 181 GETVGGGGATMNLKKENERCWSSDNSCDINLDISNTQTPIGGG-GGRACSQPGMIKDLFP 240

Query: 246 SAAFGSGAITQLIQRGSSRSTVD-HPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG 305
           SAAF S AITQL+Q GSSRSTVD HPQVIQEESFSQMFNGIEEQQQ+   AAAAGFWPW 
Sbjct: 241 SAAFRSAAITQLLQHGSSRSTVDQHPQVIQEESFSQMFNGIEEQQQT---AAAAGFWPWS 300

Query: 306 SDQNSHFN 309
           SDQNSHF+
Sbjct: 301 SDQNSHFH 304

[Close]

BLAST of Carg02258-RA vs. ExPASy TrEMBL
Match: A0A0A0KS90 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635430 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.3e-143
Identity = 272/309 (88.03%), Postives = 285/309 (92.23%), Query Frame = 0


Query: 6   MASP-HHSHSFLFQSRPA-DHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGI 65
           MASP HHSHSF+FQSRPA DHHEY+PSASFN IPSCPPHLYFHDGVVPVMMKRSMSFS +
Sbjct: 1   MASPHHHSHSFMFQSRPAPDHHEYIPSASFNTIPSCPPHLYFHDGVVPVMMKRSMSFSEV 60

Query: 66  ENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQ 125
           ENGCE++NGDEGLSDDGLALGEKKKRLNLEQVKALEKSFE+GNKLEPERK+QLAKALGLQ
Sbjct: 61  ENGCEDVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFEVGNKLEPERKMQLAKALGLQ 120

Query: 126 PRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDS 185
           PRQ+AIWFQNRRARWKTKQLERDYEVLKK FE+LKADNDVLQAQNTKLHAELLALKTKDS
Sbjct: 121 PRQIAIWFQNRRARWKTKQLERDYEVLKKQFEALKADNDVLQAQNTKLHAELLALKTKDS 180

Query: 186 GEVA-GGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCEPG-IKDLFP 245
           GE A GGGATMNLKKENERCWSSDNSCDINLDIS TQ  I GG GGR C +PG IKDLFP
Sbjct: 181 GETAGGGGATMNLKKENERCWSSDNSCDINLDISNTQTPI-GGSGGRGCSQPGMIKDLFP 240

Query: 246 SAAFGSGAITQLIQRGSSRSTVD-HPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG 305
           SAAF S AITQL+Q GSSRSTVD HPQVIQEESFSQMFNGIEEQQQ+   AAAAGFWPW 
Sbjct: 241 SAAFRSAAITQLLQHGSSRSTVDQHPQVIQEESFSQMFNGIEEQQQT---AAAAGFWPWS 300

Query: 306 -SDQNSHFN 309
            SDQNSHF+
Sbjct: 301 TSDQNSHFH 305

[Close]

BLAST of Carg02258-RA vs. ExPASy TrEMBL
Match: A0A6J1JQ21 (homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita maxima OX=3661 GN=LOC111487860 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.4e-143
Identity = 262/308 (85.06%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 6   MASPHHSHSFLFQSRPADHHEYLP--SASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGI 65
           MASPHHSHSF+FQSRPADHH+Y P  +ASFN IP CPPHLYFHDGVVP+MMKRSMSFSG+
Sbjct: 1   MASPHHSHSFMFQSRPADHHDYAPTATASFNNIPFCPPHLYFHDGVVPLMMKRSMSFSGV 60

Query: 66  ENGCEEMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQ 125
           ENGCEE+NGDEGLSDDG ALGEKKKRLNLEQVKALEKSFELGNKLEPERK+QLAKALGLQ
Sbjct: 61  ENGCEEVNGDEGLSDDGSALGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQ 120

Query: 126 PRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDS 185
           PRQ+AIWFQNRRARWKTKQLERDY+VLKK FE+LKADNDVLQAQNTKLHAELLALKTKDS
Sbjct: 121 PRQIAIWFQNRRARWKTKQLERDYDVLKKQFEALKADNDVLQAQNTKLHAELLALKTKDS 180

Query: 186 GEV-AGGGATMNLKKENERCWSSDNSCDINLDISKTQAAI--NGGEGGRACCEPGIKDLF 245
           GEV AGG AT+NLKKENERCWSSDNSCDINL+IS+TQA I  NG  GGR C +PGIKDLF
Sbjct: 181 GEVAAGGSATVNLKKENERCWSSDNSCDINLEISRTQAPITSNGSNGGRGCSQPGIKDLF 240

Query: 246 PSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWPWG 305
           PSAAF S AITQL+Q GSSRSTV+H  VIQEESF+QMFNGIEEQQQ+     AAGFWPW 
Sbjct: 241 PSAAFRSAAITQLLQHGSSRSTVNHSPVIQEESFTQMFNGIEEQQQT----TAAGFWPWS 300

Query: 306 SDQNSHFN 309
           SDQNSHF+
Sbjct: 301 SDQNSHFH 304

[Close]

BLAST of Carg02258-RA vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-62
Identity = 154/328 (46.95%), Postives = 196/328 (59.76%), Query Frame = 0


Query: 2   ISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFS 61
           + + MA P   H F+FQ    D+  +LPS +  ++PSCPPHL F+ G    MM RSMSF+
Sbjct: 18  LRLEMAFP--QHGFMFQQLHEDNAHHLPSPT--SLPSCPPHL-FYGGGGNYMMNRSMSFT 77

Query: 62  GIE----------------NGCEEMNGDEGLSDDG--LALGEKKKRLNLEQVKALEKSFE 121
           G+                 N  +++  ++ LSDDG  + LGEKKKRLNLEQV+ALEKSFE
Sbjct: 78  GVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFE 137

Query: 122 LGNKLEPERKIQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDV 181
           LGNKLEPERK+QLAKALGLQPRQ+AIWFQNRRARWKTKQLERDY+ LKK F+ LK+DND 
Sbjct: 138 LGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDS 197

Query: 182 LQAQNTKLHAELLALKTKDSGEVAGGGATMNLKKE-NERCWSSDNSCDINLDISKTQAAI 241
           L A N KLHAEL+ALK  D  E A       +K+E  E  WS++ S + N          
Sbjct: 198 LLAHNKKLHAELVALKKHDRKESA------KIKREFAEASWSNNGSTENN---------- 257

Query: 242 NGGEGGRACCEPGIKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQVI--QEESFSQMFNG 301
           +      A     IKDLFPS+   + A T       + + +DH Q++  Q++ F  MFNG
Sbjct: 258 HNNNSSDANHVSMIKDLFPSSIRSATATT-------TSTHIDH-QIVQDQDQGFCNMFNG 309

Query: 302 IEEQQQSAAAAAAAGFWPWGSDQNSHFN 309
           I+E         +A +W W   Q  H N
Sbjct: 318 IDE-------TTSASYWAWPDQQQQHHN 309

[Close]

BLAST of Carg02258-RA vs. TAIR 10
Match: AT3G01220.1 (homeobox protein 20 )

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60
Identity = 151/314 (48.09%), Postives = 186/314 (59.24%), Query Frame = 0


Query: 2   ISIPMASPHHSHSFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFS 61
           + + MA P   H F+FQ    D+       S + +PSCPPHL+  +G    MM RSMS  
Sbjct: 12  LRLEMAFP--QHGFMFQQLHEDN-------SQDQLPSCPPHLF--NGGGNYMMNRSMSLM 71

Query: 62  GIENGCEEMNGDEGLSDDG--LALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKA 121
            ++    +   +E LSDDG    LGEKKKRL LEQVKALEKSFELGNKLEPERKIQLAKA
Sbjct: 72  NVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKA 131

Query: 122 LGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALK 181
           LG+QPRQ+AIWFQNRRARWKT+QLERDY+ LKK FESLK+DN  L A N KL AE++ALK
Sbjct: 132 LGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 191

Query: 182 TKDSGEVAGGGATMNLKKENERCW----SSDNSCDINLDISKTQAAINGGEGGRACCEPG 241
            K+  E   G     +K+E E  W    S++NS DINL++ +     +            
Sbjct: 192 NKECNE---GNI---VKREAEASWSNNGSTENSSDINLEMPRETITTHVNT--------- 251

Query: 242 IKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQ---VIQEESFSQMFNGIEEQQQSAAAAA 301
           IKDLFPS+              SS    DH Q   ++QEES   MFNGI+E         
Sbjct: 252 IKDLFPSSI------------RSSAHDDDHHQNHEIVQEESLCNMFNGIDE-------TT 280

Query: 302 AAGFWPWGSDQNSH 307
            AG+W W    ++H
Sbjct: 312 PAGYWAWSDPNHNH 280

[Close]

BLAST of Carg02258-RA vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 199.5 bits (506), Expect = 3.9e-51
Identity = 134/305 (43.93%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 14  SFLFQSRPADHHEYLPSASFNAIPSCPPHLYFHDGVVPVMMKRS--MSFSGIENGCEEMN 73
           +F+ Q+   D H +   +    +PSC      H G    + KRS       +E G   MN
Sbjct: 13  NFMIQTSYEDDHPHQSPSLAPLLPSCSLPQDLH-GFASFLGKRSPMEGCCDLETG-NNMN 72

Query: 74  GDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWF 133
           G+E  SDDG  +GEKK+RLN+EQVK LEK+FELGNKLEPERK+QLA+ALGLQPRQ+AIWF
Sbjct: 73  GEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWF 132

Query: 134 QNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTKDSGEVAGGGA 193
           QNRRARWKTKQLE+DY+ LK+ F++LKA+ND+LQ  N KL AE++ LK ++  E      
Sbjct: 133 QNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTE------ 192

Query: 194 TMNLKKENERCWS--SDNSCD-INLDIS----KTQAAINGGEG------GRACCEPGIKD 253
           ++NL KE E   S  SDNS D + LDIS       + + GG        GR    P    
Sbjct: 193 SINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPPS--- 252

Query: 254 LFPSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAAAGFWP 304
             P+ A  +    Q  Q  SS  ++    V +E S S MF  +++          +GFWP
Sbjct: 253 --PATATTTTTTMQFFQNSSSGQSM----VKEENSISNMFCAMDDH---------SGFWP 291

[Close]

BLAST of Carg02258-RA vs. TAIR 10
Match: AT1G26960.1 (homeobox protein 23 )

HSP 1 Score: 181.8 bits (460), Expect = 8.4e-46
Identity = 117/250 (46.80%), Postives = 153/250 (61.20%), Query Frame = 0


Query: 55  KRSMSFSGIENGCE-EMNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERK 114
           KRS   + ++  C  +MNGDE  SDDG  +GEKK+RLN+EQ+KALEK FELGNKLE +RK
Sbjct: 40  KRS-PMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRK 99

Query: 115 IQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHA 174
           ++LA+ALGLQPRQ+AIWFQNRRAR KTKQLE+DY++LK+ FESL+ +N+VLQ QN KL A
Sbjct: 100 LELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQA 159

Query: 175 ELLALKTKDSGEVAGGGATMNLKKENERCWSSDNSCDINLDISKTQAAINGGEGGRACCE 234
           +++ALK+++  E      ++NL KE E    SD S +I+ DI                  
Sbjct: 160 QVMALKSREPIE------SINLNKETEGS-CSDRSENISGDIR----------------P 219

Query: 235 PGIKDLFPSAAFGSGAITQLIQRGSSRSTVDHPQVIQEESFSQMFNGIEEQQQSAAAAAA 294
           P I   F      +    Q  Q  SS    +   V +E S S MF GI++Q         
Sbjct: 220 PEIDSQFALGHPPTTTTMQFFQNSSS----EQRMVKEENSISNMFCGIDDQ--------- 252

Query: 295 AGFWPWGSDQ 304
           +GFWPW   Q
Sbjct: 280 SGFWPWLDQQ 252

[Close]

BLAST of Carg02258-RA vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-31
Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 75  GLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKIQLAKALGLQPRQVAIWFQNR 134
           G+        EKK+RL +EQVKALEK+FE+ NKLEPERK++LA+ LGLQPRQVAIWFQNR
Sbjct: 61  GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query: 135 RARWKTKQLERDYEVLKKHFESLKADNDVLQAQNTKLHAELLALKTK 182
           RARWKTKQLERDY VLK +F++LK + D LQ  N  L  ++  LK K
Sbjct: 121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAK 167

The following BLAST results are available for this feature:

BLAST of Carg02258-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016146.1	3.8e-173	100.00	Homeobox-leucine zipper protein HAT7, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022938977.1	2.1e-168	99.67	homeobox-leucine zipper protein ATHB-20-like [Cucurbita moschata]	[more]
KAG6578593.1	5.2e-167	99.01	Homeobox-leucine zipper protein HAT7, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023551483.1	1.5e-166	98.68	homeobox-leucine zipper protein ATHB-20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993652.1	9.3e-164	96.37	homeobox-leucine zipper protein ATHB-20-like [Cucurbita maxima]	[more]

BLAST of Carg02258-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00466	9.0e-61	46.95	Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=...	[more]
Q8LAT0	3.8e-59	48.09	Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2XD08	4.2e-50	42.14	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q8LC03	5.5e-50	43.93	Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q8S7W9	9.3e-50	40.65	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Carg02258-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFJ1	1.0e-168	99.67	homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JTG1	4.5e-164	96.37	homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3C9V4	7.2e-146	88.96	homeobox-leucine zipper protein ATHB-20-like OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0KS90	3.3e-143	88.03	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635430 PE...	[more]
A0A6J1JQ21	7.4e-143	85.06	homeobox-leucine zipper protein ATHB-20-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Carg02258-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15150.1	6.4e-62	46.95	homeobox 3	[more]
AT3G01220.1	2.7e-60	48.09	homeobox protein 20	[more]
AT1G69780.1	3.9e-51	43.93	Homeobox-leucine zipper protein family	[more]
AT1G26960.1	8.4e-46	46.80	homeobox protein 23	[more]
AT5G65310.1	3.4e-31	63.55	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..174
None	No IPR available	GENE3D	1.10.10.60		coord: 82..155 e-value: 9.8E-19 score: 68.6
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 6..308
None	No IPR available	PANTHER	PTHR24326:SF538	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7	coord: 6..308
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 121..137 score: 61.56 coord: 112..121 score: 46.99
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 84..145 e-value: 7.7E-18 score: 75.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 87..139 e-value: 1.3E-15 score: 57.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 85..141 score: 16.568216
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 86..142 e-value: 9.85485E-18 score: 73.8168
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 141..181 e-value: 8.9E-15 score: 54.6
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 116..139
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 83..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg02258	Carg02258	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02258-RA:1	Carg02258-RA:1	exon
Carg02258-RA:2	Carg02258-RA:2	exon
Carg02258-RA:3	Carg02258-RA:3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg02258-RA:cds	Carg02258-RA:cds	CDS
Carg02258-RA:cds	Carg02258-RA:cds_2	CDS
Carg02258-RA:cds	Carg02258-RA:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg02258-RA	Carg02258-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding