Carg01789-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01789-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Choline/ethanolaminephosphotransferase 1-like
Location	Carg_Chr04: 9312955 .. 9314265 (-)
Sequence length	534
RNA-Seq Expression	Carg01789-RA
Synteny	Carg01789-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTATATCGGAGCACATGGCGTGGCGGCTTTACGAAGATACAAGTACAGTGGTGAGGATCACTCCATTGTGGCGAAATATGTCTTGCAACCCTTCTGGAGGCGTTTCGTGAATTTCTTTCCTCTTTGGATGCCGTATGTGTTCTTATCTTTTAGGTCATATGAGTTTGCGAATTTATTTAAGTTTACGTGAGTTCCTTTACGAACTGAAGTTAGTTGCTAGCTTTAGAAAAATATTCAACATAAACATCCAGGCTCTAACGTTTCTCATTTAGTTTATTCTGGATCTTATTTAGCTTTAGATAAGCCTGCGTTTAAATTGTTTTCTCTTGTTATATTAATGATTTTGCTCATGAATTTTGGCAACATTTCCACCGAATAACGCTGACTTCTTCTCTCTGTTTGTGTCTGAGGACCACTTCAGCCCAAACATGGTGAATTGATCTTACATCTAGCACTGACTTGTCATTTCTACCTCCAATTTATTGGAATTGCTTCTTATATGTACTATTTTATGCCAGATAACTTTTGTTGGATTCATTTTTCTGGTCACATCTGCACTGCTTGGCTATGTGAGTTTCAATCAATCTGACCATATATGCTTCTTAGTTGAACTTCTTTGTTCAAAAGAACACAGAAATTCAAATGTGGATTCTGGAACTTTATTTTCTGATTTATTTTATGCCAGAAGCTTCGGATGAATACCAATATTAAAAGTTTCTCACTGTTTCACGTATTTTCTATTTTTTGTTTAAGGTATATTCGCCTCATCTAGATTCAGCTCCACCAAGATGGGTTCATTTTGCCCATGGGTTACTCCTTTTCTTATATCAGGTTCGATTGGTTCTTCTCCTTTCTCCATAACAGTTCTCCTGTGCTTTGCTCTAATATATACACTTTTCAACTTTAATTTCTCACTTACGTGCTAGACTTTTGATGCTGTTGATGGAAAACAAGCAAGAAGAACAAATTCATCAAGTCCATTGGGGGAACTTTTTGACCATGGTGACCTGCCTTTTCGTATAACTTTTTTTCTTTTATCTTGATTGATATATTGACAGATGATGTAATCTCTTCTTTCCATATATCTCTTCTCAGGATGTGATGCTCTTGCATGTGCGGTTGGTACCTTCTTCCTTAGTTTCAACTCATAATTTGAAGAACCTAAGTGCCATTTTTCTGAAAGTCCATGTTTTCTTTTCAGTTTGAATCTTTAGCTTTTGGAAGCACTGCCATGTGTGGGAGGAATACTTTCTGGTTATGGGTTATTGCAGCCGTTCCTTTTTATGGTGCTACATGGGAACAGTAA

mRNA sequence

ATGGGCTATATCGGAGCACATGGCGTGGCGGCTTTACGAAGATACAAGTACAGTGGTGAGGATCACTCCATTGTGGCGAAATATGTCTTGCAACCCTTCTGGAGGCGTTTCGTGAATTTCTTTCCTCTTTGGATGCCGTATGTGTTCTTATCTTTTAGGTCATATGAGTTTGCGAATTTATTTAAGTTTACCCCAAACATGATAACTTTTGTTGGATTCATTTTTCTGGTCACATCTGCACTGCTTGGCTATGTATATTCGCCTCATCTAGATTCAGCTCCACCAAGATGGGTTCATTTTGCCCATGGGTTACTCCTTTTCTTATATCAGACTTTTGATGCTGTTGATGGAAAACAAGCAAGAAGAACAAATTCATCAAGTCCATTGGGGGAACTTTTTGACCATGGATGTGATGCTCTTGCATGTGCGTTTGAATCTTTAGCTTTTGGAAGCACTGCCATGTGTGGGAGGAATACTTTCTGGTTATGGGTTATTGCAGCCGTTCCTTTTTATGGTGCTACATGGGAACAGTAA

Coding sequence (CDS)

ATGGGCTATATCGGAGCACATGGCGTGGCGGCTTTACGAAGATACAAGTACAGTGGTGAGGATCACTCCATTGTGGCGAAATATGTCTTGCAACCCTTCTGGAGGCGTTTCGTGAATTTCTTTCCTCTTTGGATGCCGTATGTGTTCTTATCTTTTAGGTCATATGAGTTTGCGAATTTATTTAAGTTTACCCCAAACATGATAACTTTTGTTGGATTCATTTTTCTGGTCACATCTGCACTGCTTGGCTATGTATATTCGCCTCATCTAGATTCAGCTCCACCAAGATGGGTTCATTTTGCCCATGGGTTACTCCTTTTCTTATATCAGACTTTTGATGCTGTTGATGGAAAACAAGCAAGAAGAACAAATTCATCAAGTCCATTGGGGGAACTTTTTGACCATGGATGTGATGCTCTTGCATGTGCGTTTGAATCTTTAGCTTTTGGAAGCACTGCCATGTGTGGGAGGAATACTTTCTGGTTATGGGTTATTGCAGCCGTTCCTTTTTATGGTGCTACATGGGAACAGTAA

Protein sequence

MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANLFKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWEQ

Homology

[Close]

BLAST of Carg01789-RA vs. NCBI nr
Match: KAG7032129.1 (Choline/ethanolaminephosphotransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.6 bits (963), Expect = 2.4e-100
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
           FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWEQ 178
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWEQ
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWEQ 177

[Close]

BLAST of Carg01789-RA vs. NCBI nr
Match: XP_022957129.1 (choline/ethanolaminephosphotransferase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 328.2 bits (840), Expect = 4.5e-86
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. NCBI nr
Match: XP_022957130.1 (choline/ethanolaminephosphotransferase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 328.2 bits (840), Expect = 4.5e-86
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. NCBI nr
Match: XP_023511552.1 (choline/ethanolaminephosphotransferase 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511561.1 choline/ethanolaminephosphotransferase 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 157/176 (89.20%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFW RFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWSRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. NCBI nr
Match: XP_023511571.1 (choline/ethanolaminephosphotransferase 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 157/176 (89.20%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFW RFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWSRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot
Match: O82567 (Choline/ethanolaminephosphotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=AAPT1 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.5e-79
Identity = 138/176 (78.41%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL RYKYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FLVTS+LLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLVTSSLLGYIYSPQLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFE++AFGSTAMCGR+TFW WVI+A+PFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot
Match: O82568 (Choline/ethanolaminephosphotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=AAPT2 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-76
Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL+++KYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FL+TSALLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLLTSALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDAL CA E++A+GSTAMCGR+TFW WVI+AVPF+GATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALGCALETMAYGSTAMCGRDTFWFWVISAVPFFGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot
Match: Q54XM0 (Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 2 OS=Dictyostelium discoideum OX=44689 GN=captB PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 74/176 (42.05%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 3   YIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANLFK 62
           YI   G+  L  Y YSG D+S      L+ +W   VNF PLW+                 
Sbjct: 7   YISEKGITNLANYHYSGVDNSFCGNKFLKHWWNYCVNFTPLWL----------------- 66

Query: 63  FTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARR 122
             PN+IT VG +  +   L+ YV+ P L    PRW +FA   L+F YQT D VDGKQAR+
Sbjct: 67  -APNIITLVGLLCNIGMYLIMYVHCPTLTEEAPRWCYFAVAFLIFAYQTLDNVDGKQARK 126

Query: 123 TNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRN-TFWLWVIAAVPFYGATWEQ 178
           T SSSPLGELFDH CDAL+ A  ++   +T   G   TF+ +++   PFY A WE+
Sbjct: 127 TKSSSPLGELFDHVCDALSVAMFAIVMSATLRIGPYWTFFSFIVGMWPFYLAHWEE 164

[Close]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot
Match: Q550W1 (Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3 OS=Dictyostelium discoideum OX=44689 GN=captC PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31
Identity = 72/167 (43.11%), Postives = 96/167 (57.49%), Query Frame = 0


Query: 14  RYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANLFKFTPNMITFVGF 73
           ++KYSG D SI+AK +LQ +W   + F PL                     P +IT  G 
Sbjct: 15  KHKYSGIDDSILAKLILQKYWNFCLKFVPL------------------NIAPYLITLTGT 74

Query: 74  IFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELF 133
           I ++ S  +   YSP+L+   PRWV+   GL LF YQT D +DGKQARRT SSSPLG+LF
Sbjct: 75  ITILLSFFIVGYYSPYLEGTLPRWVYAMSGLTLFFYQTMDNLDGKQARRTGSSSPLGQLF 134

Query: 134 DHGCDALACAFESLAFGSTAMCG---RNTFWLWVIAAVPFYGATWEQ 178
           DHGCD++ C  +SL   S A  G    +   L++ A +PF+ ATWE+
Sbjct: 135 DHGCDSIVCTLQSLIVASVANYGVGYISLIQLFITALLPFWMATWEE 163

[Close]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot
Match: P22140 (Choline/ethanolaminephosphotransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EPT1 PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31
Identity = 73/180 (40.56%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 1   MGY-IGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFAN 60
           MGY +    +  L+ YKY  ED S+V+KY L+PFW+RF + FP WM              
Sbjct: 1   MGYFVPDSHIENLKSYKYQSEDRSLVSKYFLKPFWQRFCHIFPTWM-------------- 60

Query: 61  LFKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQ 120
                PN+IT  GF F+V + L  + Y P+L++  PRW +F++ L +FLYQTFD  DG  
Sbjct: 61  ----APNIITLSGFAFIVINVLTVFYYDPNLNTDTPRWTYFSYALGVFLYQTFDGCDGVH 120

Query: 121 ARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCG--RNTFWLWVIAAVPFYGATWEQ 178
           ARR N S PLGELFDH  DA+        F S    G   N           FY +TWE+
Sbjct: 121 ARRINQSGPLGELFDHSIDAINSTLSIFIFASETGMGFSYNLMLSQFAMLTNFYLSTWEE 162

[Close]

BLAST of Carg01789-RA vs. ExPASy TrEMBL
Match: A0A6J1H130 (choline/ethanolaminephosphotransferase 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458603 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy TrEMBL
Match: A0A6J1GZN7 (choline/ethanolaminephosphotransferase 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458603 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 158/176 (89.77%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy TrEMBL
Match: A0A6J1J1L8 (choline/ethanolaminephosphotransferase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480310 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85
Identity = 156/176 (88.64%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKY GEDHSIVAKYVLQPFW RFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYIGEDHSIVAKYVLQPFWSRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy TrEMBL
Match: A0A6J1IWA7 (choline/ethanolaminephosphotransferase 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480310 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85
Identity = 156/176 (88.64%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKY GEDHSIVAKYVLQPFW RFVNFFPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYIGEDHSIVAKYVLQPFWSRFVNFFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. ExPASy TrEMBL
Match: A0A0A0KR15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608060 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.5e-83
Identity = 152/176 (86.36%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAALRRYKYSGEDHS VAKYVLQPFW RFVN FPLWMP              
Sbjct: 1   MGYIGAHGVAALRRYKYSGEDHSFVAKYVLQPFWSRFVNVFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMITF GFIFLVTSALLGYV SPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITFAGFIFLVTSALLGYVCSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAA+PFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAIPFYGATWE 158

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BLAST of Carg01789-RA vs. TAIR 10
Match: AT1G13560.1 (aminoalcoholphosphotransferase 1 )

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-80
Identity = 138/176 (78.41%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL RYKYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FLVTS+LLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLVTSSLLGYIYSPQLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDALACAFE++AFGSTAMCGR+TFW WVI+A+PFYGATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWE 158

[Close]

BLAST of Carg01789-RA vs. TAIR 10
Match: AT3G25585.2 (aminoalcoholphosphotransferase )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL+++KYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FL+TSALLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLLTSALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDAL CA E++A+GSTAMCGR+TFW WVI+AVPF+GATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALGCALETMAYGSTAMCGRDTFWFWVISAVPFFGATWE 158

[Close]

BLAST of Carg01789-RA vs. TAIR 10
Match: AT3G25585.1 (aminoalcoholphosphotransferase )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL+++KYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FL+TSALLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLLTSALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDAL CA E++A+GSTAMCGR+TFW WVI+AVPF+GATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALGCALETMAYGSTAMCGRDTFWFWVISAVPFFGATWE 158

[Close]

BLAST of Carg01789-RA vs. TAIR 10
Match: AT3G25585.4 (aminoalcoholphosphotransferase )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 1   MGYIGAHGVAALRRYKYSGEDHSIVAKYVLQPFWRRFVNFFPLWMPYVFLSFRSYEFANL 60
           MGYIGAHGVAAL+++KYSG DHS +AKYVLQPFW RFV  FPLWMP              
Sbjct: 1   MGYIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMP-------------- 60

Query: 61  FKFTPNMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQA 120
               PNMIT +GF+FL+TSALLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQA
Sbjct: 61  ----PNMITLMGFMFLLTSALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQA 120

Query: 121 RRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           RRTNSSSPLGELFDHGCDAL CA E++A+GSTAMCGR+TFW WVI+AVPF+GATWE
Sbjct: 121 RRTNSSSPLGELFDHGCDALGCALETMAYGSTAMCGRDTFWFWVISAVPFFGATWE 158

[Close]

BLAST of Carg01789-RA vs. TAIR 10
Match: AT1G13560.2 (aminoalcoholphosphotransferase 1 )

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-56
Identity = 96/111 (86.49%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 66  NMITFVGFIFLVTSALLGYVYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNS 125
           ++IT +GF+FLVTS+LLGY+YSP LDS PPRWVHFAHGLLLFLYQTFDAVDGKQARRTNS
Sbjct: 5   SVITLMGFMFLVTSSLLGYIYSPQLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNS 64

Query: 126 SSPLGELFDHGCDALACAFESLAFGSTAMCGRNTFWLWVIAAVPFYGATWE 177
           SSPLGELFDHGCDALACAFE++AFGSTAMCGR+TFW WVI+A+PFYGATWE
Sbjct: 65  SSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWE 115

The following BLAST results are available for this feature:

BLAST of Carg01789-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032129.1	2.4e-100	100.00	Choline/ethanolaminephosphotransferase 1, partial [Cucurbita argyrosperma subsp....	[more]
XP_022957129.1	4.5e-86	89.77	choline/ethanolaminephosphotransferase 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022957130.1	4.5e-86	89.77	choline/ethanolaminephosphotransferase 1-like isoform X2 [Cucurbita moschata]	[more]
XP_023511552.1	2.2e-85	89.20	choline/ethanolaminephosphotransferase 1-like isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_023511571.1	2.2e-85	89.20	choline/ethanolaminephosphotransferase 1-like isoform X2 [Cucurbita pepo subsp. ...	[more]

BLAST of Carg01789-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82567	5.5e-79	78.41	Choline/ethanolaminephosphotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=AAPT...	[more]
O82568	1.5e-76	75.57	Choline/ethanolaminephosphotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=AAPT...	[more]
Q54XM0	1.5e-31	42.05	Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 2 OS=...	[more]
Q550W1	3.3e-31	43.11	Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3 OS=...	[more]
P22140	3.3e-31	40.56	Choline/ethanolaminephosphotransferase 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Carg01789-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H130	2.2e-86	89.77	choline/ethanolaminephosphotransferase 1-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1GZN7	2.2e-86	89.77	choline/ethanolaminephosphotransferase 1-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1J1L8	5.3e-85	88.64	choline/ethanolaminephosphotransferase 1-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1IWA7	5.3e-85	88.64	choline/ethanolaminephosphotransferase 1-like isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A0A0KR15	8.5e-83	86.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608060 PE=3 SV=1	[more]

BLAST of Carg01789-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13560.1	3.9e-80	78.41	aminoalcoholphosphotransferase 1	[more]
AT3G25585.2	1.1e-77	75.57	aminoalcoholphosphotransferase	[more]
AT3G25585.1	1.1e-77	75.57	aminoalcoholphosphotransferase	[more]
AT3G25585.4	1.1e-77	75.57	aminoalcoholphosphotransferase	[more]
AT1G13560.2	1.3e-56	86.49	aminoalcoholphosphotransferase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000462	CDP-alcohol phosphatidyltransferase	PFAM	PF01066	CDP-OH_P_transf	coord: 64..138 e-value: 1.6E-17 score: 64.0
IPR000462	CDP-alcohol phosphatidyltransferase	PROSITE	PS00379	CDP_ALCOHOL_P_TRANSF	coord: 116..138
IPR043130	CDP-alcohol phosphotransferase, transmembrane domain	GENE3D	1.20.120.1760		coord: 33..175 e-value: 1.1E-24 score: 89.4
IPR014472	Choline/ethanolamine phosphotransferase	PANTHER	PTHR10414	ETHANOLAMINEPHOSPHOTRANSFERASE	coord: 62..176 coord: 1..57
None	No IPR available	PANTHER	PTHR10414:SF69	CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 2	coord: 62..176 coord: 1..57

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01789	Carg01789	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01789-RA:7	Carg01789-RA:7	exon
Carg01789-RA:6	Carg01789-RA:6	exon
Carg01789-RA:5	Carg01789-RA:5	exon
Carg01789-RA:4	Carg01789-RA:4	exon
Carg01789-RA:3	Carg01789-RA:3	exon
Carg01789-RA:2	Carg01789-RA:2	exon
Carg01789-RA:1	Carg01789-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01789-RA:cds	Carg01789-RA:cds_7	CDS
Carg01789-RA:cds	Carg01789-RA:cds_6	CDS
Carg01789-RA:cds	Carg01789-RA:cds_5	CDS
Carg01789-RA:cds	Carg01789-RA:cds_4	CDS
Carg01789-RA:cds	Carg01789-RA:cds_3	CDS
Carg01789-RA:cds	Carg01789-RA:cds_2	CDS
Carg01789-RA:cds	Carg01789-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01789-RA	Carg01789-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0006657	CDP-choline pathway
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016780	phosphotransferase activity, for other substituted phosphate groups
molecular_function	GO:0004142	diacylglycerol cholinephosphotransferase activity