CaUC10G191570.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G191570.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
LocationCiama_Chr10: 25855944 .. 25864282 (+)
Sequence length835
RNA-Seq ExpressionCaUC10G191570.1
SyntenyCaUC10G191570.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATTTCCTTGTTACTTAGCATTGGCGAAGGCTCCATTGTCTTTTGGGAAGGTCCGGGTTCATTCATCTGAGGTACAGAGACTTCACTCCATTCACGAACAGCGAGAGAGGTTGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGTATTCCATTTCCGCTCTCTTTTACGCTTTACGATCCCTTCTAGAACTACAAATCCTGCTCTTCCCGGAGCTTATTTTCAGAGATTGTTTGATTAAAGGAGTTTTGGCTCTGACAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTATTTCAATGCCCTCTCCCACCCAAATGATTTCCTTTCGTTTTATTTTCTTCGCTTTAGGTTTCGAGATTCTTCCGAGCTTTGATGTTTTATTTGCTGCTATACTGGAATTGATTGATAAGCGCAAGGTGACGTCAAATAATTTGCTGGGTGGTATTTCTTTGACATTGATTGTTACTTTCGTTGTCTAATAGTGATGAAAAATCTCTTTCCATGGTAAATAGTCAGGTCATAGTATTGTGAAGACTCCATTTCCAGGGATGTAGTAGATGCCCATCTAATCGAATTCGTTCTGGATTTATTTTGTCAAGCTTTGCCGTTCTCTTTTATTTTCTTCTGTGAACTGCGAAATTTGACTAGTCCTGTGGCTTCTCAAGTAAAATAAAAATCAACTGGTTCTACTCCTACGCTGACATCTTCGGTTTACTTTCTGAATGAAGGAGATATTAGTAGCCACGGGAGTTTCACTGTTTCCCATTTTCCCTTGACTGTCATTCACCCCCGAAAGAAAACATATTGTTAAGACGATCTGTCATCTGTTCTTACTTTTGGTTATAGTCGGTGGTTGATCTTTCAAGAGGGACACTCATGAGTCATGAGTAGTAGTGATATAAACTTTTAGCCTCTTACGAATGCAAGGATGGATTCACTTATTAGTTAATTCATGTTTTCAGTTTAACTTATTTCTTTTTGTCTTTGGCTTTCAGAAGTTTTAATTGCATACTTTATAGGTAACGTTGTGGCAACTAACACGTTCTCTTCACATCAATGCTATCTAAAATATACGTATAATATGATAAGGAGTCATGAAATTATTCAGATTCAATTTCTTCGACTGACACTTGTGTAGACTATGGTGTAGTTACACTCAATGATATTCTGTTTGCTTGATATCTATGTAAAAATCCTTAAAAGTATTTCACTTTTGTTCCTGTCTTTTATTATTTGACATGATCGATTTATTTATTTATTTATTTATTTTTTGTAAATGAGAAACCAAGCTTATAATAAAACCTAATTGATAATTACAAAAATGTAGAGAGACCAAGACCCACTACGAGGTATGAAAAATACCCCAAATCTTATTCGTATATCTCTTCACACCCCTAAAAATCCTACTATTCCTCTCAAGCCAAAGTCCCTAAGACCCCACAAAAATACTCACCTGCCATAAAACTCGGCCTTTTTCCTGAAAGGGAGATTCAATAGTCTCTTCAATCAAGAAGAACTGCCTCTGTTACAAACCCAATTAATCCCCTAGGAATCCTGACAATGCTCCCAGATTGCCAAATTATACCTACAGTCGACCAAAAAATATCCAAATCCTCCTACGCTTGATGGCACAAAGAGCATCATTGTGAGCATAAGATAAATGAAGAGTGCTTTCGAACATGACCCAATGAGTTTCTAATGAAGAACCTGTCATGCAAAGAATTTGATCTTTTTGGGAATCTTTACCTTTCAAAGAGAGGAGAAAGCAAAAGCACTGGGAGGGGTAGGAGGGCCATATGACAAGTGGAAAGATAAGAATGAACCAGGAGAGAAACCTGTGAAGGATTGGGGGACCAAAAGCGAATATCCCTTCTCCTTAGACTCATTAAAGAGTCACATATTAGCAAATACAACCACCCCATCAATAGCTTTCCTACTTGTCAAAGGGCTATTGAACCCCAAAGAACCAGAAGACAACGAAGGGGAATCTAGAGGAGGACGAAGGCCACATAATGCAACCTTTTGTCTAAAAGATGTACAAGTGAGGAAACACAGAACAAAGAGGTTTACCACCTACCCACCAATCTTTGAAAAATAGACCTTTATACCTATTCCCTATAGACCATTTAATAAAGTGCATGGAAAATGAAAAACTTTATGAAATAACACTCCAAGGACATTTAGAGTAGCCTCTAACTCATAGACTGAGACCTAGCAAAAAGGTGTGAACCATAATCGTTCACTATAACCTTGTGCCGTAATTCGTAGAGCATCAGGTTCCAAAAAAGAAAGAAAAGGCCTTAACCACTTGGCCAACAAAGCCTCATTTCGATGTCGCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTATTAGTATTTTTCATTTTAAAATCTTAGAATGACTTAGGACCATTAACTAAAGTTGATTTCGTAGGAGTAAATAGAGTTGTGCTACTGTCCTCTAGGATTGAATTTATTTAGTGAGAGTTAGTTTCTGTACGATAGCTTGTTATTTTTGTAGTTACTTATTGTTTTTCAATCAGCTTGTTGCTTAGTTGGTTTTTTTATTAGGTGGTGTAGTGTATTAAGTGGCAACTGCTGTATAATAGTAGAATAGGTTTGGTATTGTACAACTGAGTTCTTAAGAAAAAAAGGTGTGGTTCCATCTCCAATGGGCACACACAAAAGTTATTAGATCTTTGTAAATACTACCTTTATCTTATAGAATAAAGAGTTCTCTAGTATTTTTTGAGACTTAGACTGAGTTAACAATTCTTAGGTTTACATTTGGCATGGAGGAGAGATTGCTTCTTTGTGAATCGTAATTAAAAAAGTGCTCTTGAGTAGAAAGGCAAAGTTCTGTAGTAGGCTAGTTTTTTTCACTGTTTTTAATTTATTATTATTATTTTTTATAGCAACAACCTTTGTGGAGGAAAATAAATAAATAAATAAAATGAAAGAATACAATGACATACAAAAAACCAAACCTACAAAAAAAAAAAAAAAAGAGGGGATCCCATTAGAGGGACCCCAATTATGCAAAATAGTGTTCATAAAGTAGTTTCAAAAGATGAACGAAATCGAAATCCACAAAGAAGCATGAGATCTAACAAGGGACTTTATGTCACTCGAGTTCCTCTCTACACCTCTAGACATTCTATTATTTGTCTCTCCCCATAGATCACATAACACAGCACACACCATAGCAAGCCATAAGAACTAGCCCCTTCTGGCGAAAAAGCAGATGAAGGAGGAACTTGTTGGGATACCTCCTTACAAGAACTCAAGAATATTGAAATATGGAAATGTACTATAATATCGTAAGAAAAATAACAAGGTAACCTCTAGTCTTTCGAGAGGGCTAGATTCTCCCAAATTTTCCAAAAGAAATACCACAAAATTCTACACACCACTAGCCTTACTCTCACCTACTATTTATAACCCAAAAGACCTAACAAACTTAATGTCTAATTACTAGAATGCCCCTCACTATTAATCATACTAATAATCCTAATATTTCTATAACTAGGGATCTTACAAAACTCTTTGATCATATCTTAAACATTCCTCTAACTAGTAAGCATGAAACCGAAGGCTTGAAAGAAGTAGTTCCAAACAACTCTCACATACTCACATCTCCAAAGCATGTAATGGGAGAAGGGAGAAGGGTCAAAGATTGAATCACTATAATGGGAGAAGGGTCCAACAAACAATGAAAGGAAGATTTACTAGAGAGCCCTTTTTTTTTTCCTTCGATTAAGACGATGACTTTCATTGAGGAAAAAAATGAAAGAATACAAGGGCATACAAAAAGCCAAGCCCACAAAAAAGGAGGAGCATCTTCTACAAGAAATGGCTCCAACTGTGCATAATCATGCCTATAGGATAATTATAAAAATCCTTCAAATACGAAACCCAAAGAGAAACATTGAAACTAACAAGGGACCAAACATCAAAGTGATCCCTATCCACCCCCCTAAATACTCTCCTATTCCGCTGCCCCACAAAACCCACAAGATCGCAACCACCCCCACACTCCATAAAAAGCTGCCTTTCCCCCCAAAAGACGGATTGAGGAGGAACTCCTCGATCAAATCACTAACATCTCTGTGCCGCACAGTCATCAAGCCGAACGTCTGGAAGAAGGAGTCCCAAACATGACTCGCATACTCCCAATGCCAGAGAATATGGTCAAGGTCTTTCTCCGCCTTCCGACAAAGGATGCAACAAAAAGGCCCAACCAGCGAGGGCATCTTCCTCACGAGCCTATCCATTGTGTTAGCGCGGCCGTGGAGAACCTGCCAAGTAAAGAACCTCACCTTTCTAGGGATCTTAATTCTCCAGAGAATCGAAAAAAACCGACACCCCTAAGGGCGAGGGATTGACCAAATAATGAAAGAAAGACTTGCACGAAAACCCTTCCAAAGGATTAAGGCTCCAATATCTGACATCTCTTCTCCCACTTCTAAAAGAATGACTCTCAAGTAAAGAAAGGAGAGCCACAACATCTGTCATTTCCCTATCGGAAAGAGACCGATAGAACCCAAAGGAGAAAGCTTTCTCCCGAGCCTAAAGTGATAGTCCCCAGTCAAAGACAAGAGGGAGACAACCTCTGTCAATTCCCTTGGTCAATGAAAACCAAAAGAAAAAGAAATCAAGCTCCCTCCCTGACCAAACAAGAAAATAAAAAACCAAATGATTTTTTTTTTCCCTTTTTTTCTTCGGGATAAGAACAAATGATTTTTGAAGGAACACAAATGATAGAGATGGAAAACATTATGCAGAGGGTTTTGCCTCTCATCACCCACTGATCTTCCCAAAAATATCCCTTCTGCATCACACAATGGACCACATGAGAGATAGAAGGGAACTCATAAGAAATATCCTTCCACAAGTTTCGATAAGTGCCTTTAACCCCACCTGATGACCACTCGAAAGGGTGAGATGAGGACCATACTTGCTCAAAATAATTCTATGCCAAAGAGTTCCAGGCTCAAAGGGTGGAAGTGCCAAAGCCATTTAGCTAGCAGGGCTTTGTTGTGAGTCCTTAAGTTCCCAATTTCTTCCCCCTTTCACAGGCTCTTACGAACCAAGCAAGGGACTGTAAGTAGAGAGAGATAATTAATTGAATACCACTCAGAACCAAACAAACTAAGGTTAGTTTGCAAGCCTTAGACAAAAAGCATTTCTTTTCCTAACCTTATCCACAACAGTGTTCCAAAAAGACAAAAATTTAGGATTACCTCTAAGAAGGAGACCTATGTAGGAGGGAGGGACAGAACCAATTTCACAGCCAAAAAAAATCTGCCTAACTGCTAGGCTTCTCCTTGGTGCAATTTATCCCAAAATTTGACGCTTCCTCCTATTGATCTTAAGCCTTGATATAGCTTCAAAAAAGCCAGCATATGATTTAAAATTAAGAATGAATCCTTCCTACTCCTACTAGAACAAAAAAGGATTGGGTTGTCGGTGAATTGAAGTTGAGATAAAGACACTCTCTTTACCAACCTCAAAGGGCTCAATAATTTTACCTTCAACAATTGGAAAAATGATCCTACTTAGCACATCCACCACAAGCAAGAAGAGAAAAGGTGATAAAGGATCACTCTGTCTCAGGCTCCTAAAAGCCTTCATCTTGCCCTTCGGACTCCATTAATGAGAATAGAGCAACTCACACTTCTAGTACAACTTTGCATCCTTCTTTCTTTTCTCCCAATGTTCTTTCTTTTTTAATTTTTTTTCCAATGAAAGTTGTTCTCATAAAAAAAAAAAAGTATGATTCTGCATCCACATCCTCCATTTATACCCAAAACCTTTTTCTCCATGAGCTTGTCCAAAAAATTTCCATCGACAATTCTAGGAAGGGCTATTGTTTGGGGTATTTGGGTTGAGTGGAATAACTGAATTTTTAGGGAAATGGAGAGATCAAGTGAGGAAGTAACGGAGTGGAAAAATGTGTAGTCAACTTCAGGAGGCTGCCCGAAAGGTTACTGCTGTACAAAAAGAGATTGAAACATTCAGCAATCTGTAATTATGATCCAAAAAACATTCATCAAGTGAGGAAGTATGTGAACTTTGGGGAAATGTAGATATTGGGATTTTACGTTCAATTTTATACGGAGTGTTAATGATTCCTATGATTAGCTCCCAAGTAAGAGTGTTCATCCTACCATGCGCATTTGCATAAGTTTTGGGTCAAGGATCCCAGAATCATTTGAGTCTGTGATGACATTCAAAAGAGATTTGCAGGCTTGCAGCCAAATGAGCGGAGTCATAAAGCTACAGCCACTTGTCTTCCATAGGCCTAAGCATGATTTAACAAGGGTATCCATAAGAGAGATTCATTTTTGGACATCCAAACTTATTGGAAAGCATTTGCAACGACATAATTGAAGAAAAATGCCAGGGAGAGGTATAGTACCCCCTGAGGACTTTCTCAAGATCTGGTGTTTGTTCAATACCTTCCATGTTAGTCTCTTGAAGCCGATACCTCTTTCAATTCGAAATTGGCGCTGTAAGGGCCTTTAGTGGTTTTGGTGGTTGGTTGAGTGGATCACTAGCCATCTTTGGAAACTCCCTATTGTTTTAGCTAATTATCATGCCTACTGTACTTCAAAATTTTAGAACAATGTAGAAGAGGTGGAAAAGAGAAAGAGGAGAGGCTTCTTACGCAAAATCGACAAAGAGAGCTTGTGATTATGAGGATTGGAATTACCTTGATGGTGTTCTGAGAATGAAAGATTTTGGTTCAAGATGGAGGTCATGGATTGGCACCTCTACAAACAATTGTGGAAATTGGAAGTGGACGATATGCTTTCTTTGCCTTTTTAACCATCTGGTTTGGCCGATGATCATAGGGAACAATTGGTGAATGATACGACATTAAATTTCATAAGATTACATCTATCAATTTTTTGAAAGAGTTGAAATTTAAAGGATCTGTGACTGCAATATGCACTTTTTATGTTTGTTTTTGGTTACTGCAACTAATCATTTTCCCTGTTTCTTTTTGATTTGCTAGACATGGGCATTGAGAGGGTTGCTCGTCTTGAGGGTTTAAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTCAAAGTTGGGGCATCCTGAAGGAGTAATCTGCTGTGCTATTGTTACTTGCAATAGACGTTAATAAATGCACAAGTGGAACTTTTGTTGAGATGCTTTTCTGTTTACATTCTCTTCGCTCAGCTTTTTTTGAGATTATAGCTCAAATATTCATCTTGACAAATCGTGTTTCTGGTACGTATGCTTATTTGTTTATATGAATAGTTTCTCCGGGAGTTGTCATAATAGATACTCCTTGCAATGAGAGATTAGATTGAAAAAATATTAAAACATGAGAGAATAAATGGATACTTTTT

mRNA sequence

CAAAAATTTCCTTGTTACTTAGCATTGGCGAAGGCTCCATTGTCTTTTGGGAAGGTCCGGGTTCATTCATCTGAGGTACAGAGACTTCACTCCATTCACGAACAGCGAGAGAGGTTGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTATTTCAATGCCCTCTCCCACCCAAATGATTTCCTTTCGTTTTATTTTCTTCGCTTTAGGTTTCGAGATTCTTCCGAGCTTTGATGTTTTATTTGCTGCTATACTGGAATTGATTGATAAGCGCAAGGTGACGTCAAATAATTTGCTGGGTGACATGGGCATTGAGAGGGTTGCTCGTCTTGAGGGTTTAAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTCAAAGTTGGGGCATCCTGAAGGAGTAATCTGCTGTGCTATTGTTACTTGCAATAGACGTTAATAAATGCACAAGTGGAACTTTTGTTGAGATGCTTTTCTGTTTACATTCTCTTCGCTCAGCTTTTTTTGAGATTATAGCTCAAATATTCATCTTGACAAATCGTGTTTCTGGTACGTATGCTTATTTGTTTATATGAATAGTTTCTCCGGGAGTTGTCATAATAGATACTCCTTGCAATGAGAGATTAGATTGAAAAAATATTAAAACATGAGAGAATAAATGGATACTTTTT

Coding sequence (CDS)

ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTATTTCAATGCCCTCTCCCACCCAAATGATTTCCTTTCGTTTTATTTTCTTCGCTTTAGGTTTCGAGATTCTTCCGAGCTTTGATGTTTTATTTGCTGCTATACTGGAATTGATTGATAAGCGCAAGGTGACGTCAAATAATTTGCTGGGTGACATGGGCATTGAGAGGGTTGCTCGTCTTGAGGGTTTAAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTCAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIERVARLEGLSEAQISKALEDLVKVGAS
Homology
[Close]
BLAST of CaUC10G191570.1 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 94/146 (64.38%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 5.4e-37
Identity = 93/146 (63.70%), Postives = 94/146 (64.38%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARGFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMG+E
Sbjct: 61  WARY---------------------------------------------------DMGVE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. NCBI nr
Match: XP_004141152.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 5.4e-37
Identity = 93/146 (63.70%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.1 bits (414), Expect = 9.2e-37
Identity = 93/146 (63.70%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. NCBI nr
Match: XP_022152373.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia])

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-36
Identity = 91/146 (62.33%), Postives = 94/146 (64.38%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMG+E
Sbjct: 61  WARY---------------------------------------------------DMGVE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 73/146 (50.00%), Postives = 85/146 (58.22%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMG+E
Sbjct: 61  WARY---------------------------------------------------DMGVE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           R   L+GL+E QI KALE+LVK GA+
Sbjct: 121 RCVNLDGLTEPQILKALENLVKSGAT 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0 

Query: 4  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWAR 63
          RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 70

Query: 64 YGISMPSPTQMISF 78
          Y         + +F
Sbjct: 71 YAFGQEKNVSLNNF 82

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match: O43678 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Homo sapiens OX=9606 GN=NDUFA2 PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 11 LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYGISMPS 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY     +
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75

Query: 71 PTQMISF 78
             + +F
Sbjct: 76 NVPLNNF 82

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 11 LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYGISMPS 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY      
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 PTQMISF 78
             + +F
Sbjct: 76 NVPLNNF 82

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 11 LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYGISMPS 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY      
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 PTQMISF 78
             + +F
Sbjct: 76 NVPLNNF 82

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 94/146 (64.38%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 94/146 (64.38%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match: A0A0A0LDA2 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.6e-37
Identity = 93/146 (63.70%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1   MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.4e-37
Identity = 93/146 (63.70%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match: A0A6J1J6D3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482169 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36
Identity = 92/146 (63.01%), Postives = 94/146 (64.38%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMGIE
Sbjct: 61  WARY---------------------------------------------------DMGIE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           RVARLEGLSEAQI KALEDLVKVGAS
Sbjct: 121 RVARLEGLSEAQILKALEDLVKVGAS 95

[Close]
BLAST of CaUC10G191570.1 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31
Identity = 73/146 (50.00%), Postives = 85/146 (58.22%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60
           MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61  WARYGISMPSPTQMISFRFIFFALGFEILPSFDVLFAAILELIDKRKVTSNNLLGDMGIE 120
           WARY                                                   DMG+E
Sbjct: 61  WARY---------------------------------------------------DMGVE 95

Query: 121 RVARLEGLSEAQISKALEDLVKVGAS 147
           R   L+GL+E QI KALE+LVK GA+
Sbjct: 121 RCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:
BLAST of CaUC10G191570.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465169.11.8e-3764.38PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis... [more]
XP_038906356.15.4e-3763.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida][more]
XP_004141152.15.4e-3763.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus][more]
XP_022935669.19.2e-3763.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos... [more]
XP_022152373.14.6e-3662.33NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charanti... [more]
BLAST of CaUC10G191570.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIJ21.7e-3050.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal... [more]
Q023705.1e-1451.35NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99... [more]
O436781.1e-1352.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Homo sapiens OX=... [more]
Q4R5E21.5e-1352.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula... [more]
P0CB791.5e-1352.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=... [more]
BLAST of CaUC10G191570.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T2I69.0e-3864.38NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var... [more]
A0A1S3CN679.0e-3864.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=... [more]
A0A0A0LDA22.6e-3763.70L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8454... [more]
A0A6J1F6284.4e-3763.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A6J1J6D32.2e-3663.01NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
BLAST of CaUC10G191570.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47890.11.2e-3150.00NADH-ubiquinone oxidoreductase B8 subunit, putative [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..144
e-value: 7.6E-8
score: 42.1
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 28..65
e-value: 9.6E-11
score: 41.4
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..144
e-value: 1.7E-27
score: 97.6
NoneNo IPR availablePIRSRPIRSR005822-1PIRSR005822-1coord: 1..65
e-value: 1.5E-28
score: 97.1
NoneNo IPR availablePANTHERPTHR12878:SF5BNAANNG07980D PROTEINcoord: 1..67
NoneNo IPR availablePANTHERPTHR12878:SF5BNAANNG07980D PROTEINcoord: 116..145
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 116..145
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..67
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..142

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC10G191570CaUC10G191570gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G191570.1-exonCaUC10G191570.1-exon-Ciama_Chr10:25855944..25856148exon
CaUC10G191570.1-exonCaUC10G191570.1-exon-Ciama_Chr10:25856265..25856524exon
CaUC10G191570.1-exonCaUC10G191570.1-exon-Ciama_Chr10:25863913..25864282exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G191570.1-five_prime_utrCaUC10G191570.1-five_prime_utr-Ciama_Chr10:25855944..25856062five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G191570.1-cdsCaUC10G191570.1-cds-Ciama_Chr10:25856063..25856148CDS
CaUC10G191570.1-cdsCaUC10G191570.1-cds-Ciama_Chr10:25856265..25856524CDS
CaUC10G191570.1-cdsCaUC10G191570.1-cds-Ciama_Chr10:25863913..25864007CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G191570.1-three_prime_utrCaUC10G191570.1-three_prime_utr-Ciama_Chr10:25864008..25864282three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC10G191570.1CaUC10G191570.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome