CaUC10G181980.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G181980.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ethylene-responsive transcription factor ERF039
Location	Ciama_Chr10: 3057615 .. 3058295 (+)
Sequence length	681
RNA-Seq Expression	CaUC10G181980.1
Synteny	CaUC10G181980.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATCCTCTTCACAGATTCCAATTTCATTCTCAATCTTCATCTTCTTCTTCATCAGATATCAAAAATTGCATCAAAGAAAAAAACTCCAAGAAAGTTAAACTCGAAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTCATTCCGCTTACCTTAATTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTTCTCGATTCCACTCACGATGATGATCTCAACTCCGCCGCCAAATCTGACCTCAATCTCAATCGCTCCCCTTCCTCCGCCGTTGCTGCCAAATCCTCCGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCCCAATTTCTCCCTATTGACGGTTTCGACTCTGTTTTTACACTGCCGCCGTCACCGCCGTCGCCGCCGTCTGATTGTTTCGCTTACAGAGGTAGCCTACTCTAG

mRNA sequence

ATGGAAGATCCTCTTCACAGATTCCAATTTCATTCTCAATCTTCATCTTCTTCTTCATCAGATATCAAAAATTGCATCAAAGAAAAAAACTCCAAGAAAGTTAAACTCGAAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTCATTCCGCTTACCTTAATTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTTCTCGATTCCACTCACGATGATGATCTCAACTCCGCCGCCAAATCTGACCTCAATCTCAATCGCTCCCCTTCCTCCGCCGTTGCTGCCAAATCCTCCGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCCCAATTTCTCCCTATTGACGGTTTCGACTCTGTTTTTACACTGCCGCCGTCACCGCCGTCGCCGCCGTCTGATTGTTTCGCTTACAGAGGTAGCCTACTCTAG

Coding sequence (CDS)

ATGGAAGATCCTCTTCACAGATTCCAATTTCATTCTCAATCTTCATCTTCTTCTTCATCAGATATCAAAAATTGCATCAAAGAAAAAAACTCCAAGAAAGTTAAACTCGAAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTCATTCCGCTTACCTTAATTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTTCTCGATTCCACTCACGATGATGATCTCAACTCCGCCGCCAAATCTGACCTCAATCTCAATCGCTCCCCTTCCTCCGCCGTTGCTGCCAAATCCTCCGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCCCAATTTCTCCCTATTGACGGTTTCGACTCTGTTTTTACACTGCCGCCGTCACCGCCGTCGCCGCCGTCTGATTGTTTCGCTTACAGAGGTAGCCTACTCTAG

Protein sequence

MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL

Homology

[Close]

BLAST of CaUC10G181980.1 vs. NCBI nr
Match: XP_038905215.1 (ethylene-responsive transcription factor ERF039-like [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 203/231 (87.88%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQ-----SSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGK 60
           MEDPLHRFQFHSQ     SSSSSSSDIKN IKE+NSKK+KL NDG HPTYRGVRMRQWGK
Sbjct: 1   MEDPLHRFQFHSQSSSSSSSSSSSSDIKNSIKERNSKKLKLVNDGTHPTYRGVRMRQWGK 60

Query: 61  WVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSP 120
           WVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSP
Sbjct: 61  WVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSP 120

Query: 121 KDIRAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDL 180
           KDIRAAAAKAASF+  NL    HDD+ N+AAKSDLNLNRSPSSAVAAKSSG+IDDPFFDL
Sbjct: 121 KDIRAAAAKAASFTNLNL----HDDEHNAAAKSDLNLNRSPSSAVAAKSSGDIDDPFFDL 180

Query: 181 PDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           PDLFLDDPNHQIDTFCFSQFLPIDGFDSVFT PPS    PSD FAYRGS+L
Sbjct: 181 PDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTRPPS----PSDYFAYRGSIL 223

[Close]

BLAST of CaUC10G181980.1 vs. NCBI nr
Match: XP_008448820.1 (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo] >KAA0041073.1 ethylene-responsive transcription factor ERF039 [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 189/226 (83.63%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPL RFQFHSQ SSSSSSDIKNCIKEK SKKVKL +DGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQRFQFHSQ-SSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAA+TIKGHSAYLNFPELAHRLPRPASSSPKDIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFL 180
           AAAKAA F          +D+ N  AKS+LNLN   SSAVA KS GEIDD FFDLPDLF+
Sbjct: 121 AAAKAALF----------NDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFI 180

Query: 181 DDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPNHQIDTFCFSQF+PIDGFDSVFT P S PS PSD F YRGSLL
Sbjct: 181 DDPNHQIDTFCFSQFVPIDGFDSVFTRPLS-PSSPSDYFTYRGSLL 214

[Close]

BLAST of CaUC10G181980.1 vs. NCBI nr
Match: XP_004147220.1 (ethylene-responsive transcription factor ERF039 [Cucumis sativus] >KGN55849.1 hypothetical protein Csa_010580 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 183/226 (80.97%), Postives = 192/226 (84.96%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPL RFQ HSQ SSSSSSDIKNCIK+K SKKVK+ ND KHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQRFQLHSQ-SSSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFST EMAARAHDVAA+TIKGHSAYLNFPELAHRLPRPASSSPKDIRA
Sbjct: 61  REPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFL 180
           AAAKAA F          +D+ N  AKS++NLN   SSAVA KS GEIDD FFDLPDLF+
Sbjct: 121 AAAKAALF----------NDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFFDLPDLFI 180

Query: 181 DDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPNHQIDTFCFSQF+PIDGFDSVFT  PS PS  SD F YRGSLL
Sbjct: 181 DDPNHQIDTFCFSQFVPIDGFDSVFT-RPSSPSSSSDYFTYRGSLL 214

[Close]

BLAST of CaUC10G181980.1 vs. NCBI nr
Match: XP_022923459.1 (ethylene-responsive transcription factor ERF039-like [Cucurbita moschata])

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-88
Identity = 185/227 (81.50%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPLHR Q  S SSSSSSSDIKN +KEK SKKVKL NDGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLHRLQSSSSSSSSSSSDIKNGVKEKISKKVKLGNDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAH LPRPA+SSP DIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSSPNDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRS-PSSAVAAKSSGEIDDPFFDLPDLF 180
           AAAKAASF+T+   D  H   + +AA+SDLN NRS  SS+VAAKS GEIDDPFFDLPDLF
Sbjct: 121 AAAKAASFTTD---DHHH---IIAAAQSDLNHNRSTSSSSVAAKSPGEIDDPFFDLPDLF 180

Query: 181 LDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           L DPNHQI TFC+SQFLPI+ FDSV   PPSP  PPS+ FAYRGSLL
Sbjct: 181 L-DPNHQIGTFCYSQFLPIESFDSVLAPPPSP--PPSEYFAYRGSLL 218

[Close]

BLAST of CaUC10G181980.1 vs. NCBI nr
Match: KAG6577676.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.6 bits (841), Expect = 4.4e-86
Identity = 184/231 (79.65%), Postives = 195/231 (84.42%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPLHR Q  S SSSSSSSD KN +KEK SKKVKL NDGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLHRLQ--SSSSSSSSSDNKNGVKEKISKKVKLGNDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAH LPRPA+SSP DIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSSPNDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNR-----SPSSAVAAKSSGEIDDPFFDL 180
           AAAKAASF+T+   D  H   + +AA+SDLN NR     S SS+VAAKS GEIDDPFFDL
Sbjct: 121 AAAKAASFTTD---DHHH---IIAAAQSDLNHNRSTSSSSSSSSVAAKSPGEIDDPFFDL 180

Query: 181 PDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           PDLFL DPNHQI TFC+SQFLPI+ FDSV   PPSP  PPS+ FAYRGSLL
Sbjct: 181 PDLFL-DPNHQIGTFCYSQFLPIESFDSVLAPPPSP--PPSEYFAYRGSLL 220

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.4e-40
Identity = 98/176 (55.68%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKNSKKVKLEND----GKHPTYRGVRMRQWGKWVSEIREPKKKSRI 73
           SS  S  ++++ + EK  K  K +N+     K P +RGVRMRQWGKWVSEIREP+KKSRI
Sbjct: 5   SSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRI 64

Query: 74  WLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFS 133
           WLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+ AAA AA+  
Sbjct: 65  WLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV- 124

Query: 134 TNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNH 186
                              D     SPSS V   SS   DD F DLPDL LD  +H
Sbjct: 125 -------------------DWKAPESPSSTVT--SSPVADDAFSDLPDLLLDVNDH 158

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 103/193 (53.37%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 3   DPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLEND-----GKHPTYRGVRMRQWGKWV 62
           D   RFQ       S +   +  +K K  KK   ++D      KHP +RGVRMRQWGKWV
Sbjct: 4   DDCRRFQ------DSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWV 63

Query: 63  SEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKD 122
           SEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKD
Sbjct: 64  SEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKD 123

Query: 123 IRAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPD 182
           I+AAAA AA+    ++      D   S+      +  + S A+ A S    DD F DLPD
Sbjct: 124 IQAAAAAAAAAVAIDM------DVETSSPSPSPTVTETSSPAMIALS----DDAFSDLPD 179

Query: 183 LFLDDPNHQIDTF 191
           L L + NH ID F
Sbjct: 184 LLL-NVNHNIDGF 179

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.7e-37
Identity = 95/195 (48.72%), Postives = 124/195 (63.59%), Query Frame = 0


Query: 12  SQSSSSSSSDIKNCIKEKNS----KKVKLENDGKHPT-YRGVRMRQWGKWVSEIREPKKK 71
           + SS S S+  ++ +++ +S    +K  + +D K+PT YRGVRMR WGKWVSEIREP+KK
Sbjct: 33  TSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKK 92

Query: 72  SRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAA 131
           SRIWLGT+ T EMAARAHDVAA  IKG+S +LNFPEL+  LPRP S SPKDI+AAA KAA
Sbjct: 93  SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

Query: 132 SFST-------NNLLDSTHDDDLNSAAKSDLNLN---RSPSSAVAAKSSGEIDDPFFDLP 191
             +T         L D     +L S A+S  + +    S +S  ++      ++  FDLP
Sbjct: 153 EATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLP 212

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36
Identity = 109/245 (44.49%), Postives = 134/245 (54.69%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKNSKK----------VKLEND----------------GKHPTYRG 73
           SSSSSSS   N I+E NSK+          V +E+D                 KHPTYRG
Sbjct: 43  SSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRG 102

Query: 74  VRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRL 133
           VRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNFP+LA  L
Sbjct: 103 VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGEL 162

Query: 134 PRPASSSPKDIRAAAAKAA---SFSTNNLLDS-------------------THDDDLNSA 193
           PRP ++SPKDI+AAA+ AA     S N++ +S                   + D    + 
Sbjct: 163 PRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTT 222

Query: 194 AKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNHQI--DTFC-FSQFLPIDGFD 208
            +S      S +S  A       ++  FDLPDLF D+    I  D FC +S    + G D
Sbjct: 223 TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD 282

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 86/167 (51.50%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKN--SKKVKLENDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWL 73
           +S S+ S   + ++++N   KK  +++ GKHP YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 74  GTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTN 133
           GTF +PEMAARAHDVAA +IKG SA LNFP+LA   PRP+S SP+DI+ AA KAA   T+
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 134 NLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDL 179
               S+     +S+  S    +   SSA  ++  GEI     +LP L
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEI----VELPSL 165

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL
Match: A0A5A7TD44 (Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00450 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 189/226 (83.63%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPL RFQFHSQ SSSSSSDIKNCIKEK SKKVKL +DGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQRFQFHSQ-SSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAA+TIKGHSAYLNFPELAHRLPRPASSSPKDIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFL 180
           AAAKAA F          +D+ N  AKS+LNLN   SSAVA KS GEIDD FFDLPDLF+
Sbjct: 121 AAAKAALF----------NDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFI 180

Query: 181 DDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPNHQIDTFCFSQF+PIDGFDSVFT P S PS PSD F YRGSLL
Sbjct: 181 DDPNHQIDTFCFSQFVPIDGFDSVFTRPLS-PSSPSDYFTYRGSLL 214

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL
Match: A0A1S3BK05 (ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC103490873 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 189/226 (83.63%), Postives = 196/226 (86.73%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPL RFQFHSQ SSSSSSDIKNCIKEK SKKVKL +DGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQRFQFHSQ-SSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAA+TIKGHSAYLNFPELAHRLPRPASSSPKDIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFL 180
           AAAKAA F          +D+ N  AKS+LNLN   SSAVA KS GEIDD FFDLPDLF+
Sbjct: 121 AAAKAALF----------NDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFI 180

Query: 181 DDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPNHQIDTFCFSQF+PIDGFDSVFT P S PS PSD F YRGSLL
Sbjct: 181 DDPNHQIDTFCFSQFVPIDGFDSVFTRPLS-PSSPSDYFTYRGSLL 214

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL
Match: A0A0A0L472 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019400 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.3e-91
Identity = 183/226 (80.97%), Postives = 192/226 (84.96%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPL RFQ HSQ SSSSSSDIKNCIK+K SKKVK+ ND KHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQRFQLHSQ-SSSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFST EMAARAHDVAA+TIKGHSAYLNFPELAHRLPRPASSSPKDIRA
Sbjct: 61  REPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFL 180
           AAAKAA F          +D+ N  AKS++NLN   SSAVA KS GEIDD FFDLPDLF+
Sbjct: 121 AAAKAALF----------NDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFFDLPDLFI 180

Query: 181 DDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPNHQIDTFCFSQF+PIDGFDSVFT  PS PS  SD F YRGSLL
Sbjct: 181 DDPNHQIDTFCFSQFVPIDGFDSVFT-RPSSPSSSSDYFTYRGSLL 214

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL
Match: A0A6J1E6G7 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111431149 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.7e-89
Identity = 185/227 (81.50%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MEDPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVSEI 60
           MEDPLHR Q  S SSSSSSSDIKN +KEK SKKVKL NDGKHPTYRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLHRLQSSSSSSSSSSSDIKNGVKEKISKKVKLGNDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120
           REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAH LPRPA+SSP DIRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSSPNDIRA 120

Query: 121 AAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRS-PSSAVAAKSSGEIDDPFFDLPDLF 180
           AAAKAASF+T+   D  H   + +AA+SDLN NRS  SS+VAAKS GEIDDPFFDLPDLF
Sbjct: 121 AAAKAASFTTD---DHHH---IIAAAQSDLNHNRSTSSSSVAAKSPGEIDDPFFDLPDLF 180

Query: 181 LDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           L DPNHQI TFC+SQFLPI+ FDSV   PPSP  PPS+ FAYRGSLL
Sbjct: 181 L-DPNHQIGTFCYSQFLPIESFDSVLAPPPSP--PPSEYFAYRGSLL 218

[Close]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL
Match: A0A6J1HN35 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111465108 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 184/238 (77.31%), Postives = 194/238 (81.51%), Query Frame = 0


Query: 1   MEDPLHRFQ--FHSQSSSSSSSDIKNCIKEKNSKKVKLENDGKHPTYRGVRMRQWGKWVS 60
           MEDPLHR Q    S SSSSSSSDIKN +KEK SKKVKL NDGKHPTYRGVRMRQWGKWVS
Sbjct: 1   MEDPLHRVQSSSSSSSSSSSSSDIKNGVKEKISKKVKLGNDGKHPTYRGVRMRQWGKWVS 60

Query: 61  EIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDI 120
           EIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAH LPRPA+SSP DI
Sbjct: 61  EIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHCLPRPATSSPNDI 120

Query: 121 RAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNR----------SPSSAVAAKSSGEI 180
           RAAAAKAASF+    +D  H     +AA+SDLN NR          S SS+VAAKS GEI
Sbjct: 121 RAAAAKAASFT----IDDHHH---IAAAQSDLNHNRSTSSSSSSSSSSSSSVAAKSPGEI 180

Query: 181 DDPFFDLPDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTLPPSPPSPPSDCFAYRGSLL 227
           DDPFFDLPDLFL DPNHQI TFC+SQFLPI+ FDSV   PPSP  PPS+ FAYRGSLL
Sbjct: 181 DDPFFDLPDLFL-DPNHQIGTFCYSQFLPIESFDSVLAPPPSP--PPSEYFAYRGSLL 228

[Close]

BLAST of CaUC10G181980.1 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-41
Identity = 98/176 (55.68%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKNSKKVKLEND----GKHPTYRGVRMRQWGKWVSEIREPKKKSRI 73
           SS  S  ++++ + EK  K  K +N+     K P +RGVRMRQWGKWVSEIREP+KKSRI
Sbjct: 5   SSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRI 64

Query: 74  WLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFS 133
           WLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+ AAA AA+  
Sbjct: 65  WLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV- 124

Query: 134 TNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNH 186
                              D     SPSS V   SS   DD F DLPDL LD  +H
Sbjct: 125 -------------------DWKAPESPSSTVT--SSPVADDAFSDLPDLLLDVNDH 158

[Close]

BLAST of CaUC10G181980.1 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-39
Identity = 103/193 (53.37%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 3   DPLHRFQFHSQSSSSSSSDIKNCIKEKNSKKVKLEND-----GKHPTYRGVRMRQWGKWV 62
           D   RFQ       S +   +  +K K  KK   ++D      KHP +RGVRMRQWGKWV
Sbjct: 4   DDCRRFQ------DSPAQTTERRVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWV 63

Query: 63  SEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKD 122
           SEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKD
Sbjct: 64  SEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKD 123

Query: 123 IRAAAAKAASFSTNNLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPD 182
           I+AAAA AA+    ++      D   S+      +  + S A+ A S    DD F DLPD
Sbjct: 124 IQAAAAAAAAAVAIDM------DVETSSPSPSPTVTETSSPAMIALS----DDAFSDLPD 179

Query: 183 LFLDDPNHQIDTF 191
           L L + NH ID F
Sbjct: 184 LLL-NVNHNIDGF 179

[Close]

BLAST of CaUC10G181980.1 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 6.1e-38
Identity = 95/195 (48.72%), Postives = 124/195 (63.59%), Query Frame = 0


Query: 12  SQSSSSSSSDIKNCIKEKNS----KKVKLENDGKHPT-YRGVRMRQWGKWVSEIREPKKK 71
           + SS S S+  ++ +++ +S    +K  + +D K+PT YRGVRMR WGKWVSEIREP+KK
Sbjct: 33  TSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKK 92

Query: 72  SRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAA 131
           SRIWLGT+ T EMAARAHDVAA  IKG+S +LNFPEL+  LPRP S SPKDI+AAA KAA
Sbjct: 93  SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

Query: 132 SFST-------NNLLDSTHDDDLNSAAKSDLNLN---RSPSSAVAAKSSGEIDDPFFDLP 191
             +T         L D     +L S A+S  + +    S +S  ++      ++  FDLP
Sbjct: 153 EATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLP 212

[Close]

BLAST of CaUC10G181980.1 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 109/245 (44.49%), Postives = 134/245 (54.69%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKNSKK----------VKLEND----------------GKHPTYRG 73
           SSSSSSS   N I+E NSK+          V +E+D                 KHPTYRG
Sbjct: 43  SSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRG 102

Query: 74  VRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRL 133
           VRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNFP+LA  L
Sbjct: 103 VRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGEL 162

Query: 134 PRPASSSPKDIRAAAAKAA---SFSTNNLLDS-------------------THDDDLNSA 193
           PRP ++SPKDI+AAA+ AA     S N++ +S                   + D    + 
Sbjct: 163 PRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTT 222

Query: 194 AKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDLFLDDPNHQI--DTFC-FSQFLPIDGFD 208
            +S      S +S  A       ++  FDLPDLF D+    I  D FC +S    + G D
Sbjct: 223 TQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGAD 282

[Close]

BLAST of CaUC10G181980.1 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 9.8e-36
Identity = 86/167 (51.50%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 14  SSSSSSSDIKNCIKEKN--SKKVKLENDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWL 73
           +S S+ S   + ++++N   KK  +++ GKHP YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 74  GTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTN 133
           GTF +PEMAARAHDVAA +IKG SA LNFP+LA   PRP+S SP+DI+ AA KAA   T+
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 134 NLLDSTHDDDLNSAAKSDLNLNRSPSSAVAAKSSGEIDDPFFDLPDL 179
               S+     +S+  S    +   SSA  ++  GEI     +LP L
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEI----VELPSL 165

The following BLAST results are available for this feature:

BLAST of CaUC10G181980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905215.1	1.3e-103	87.88	ethylene-responsive transcription factor ERF039-like [Benincasa hispida]	[more]
XP_008448820.1	2.5e-94	83.63	PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo] >KAA00...	[more]
XP_004147220.1	1.3e-90	80.97	ethylene-responsive transcription factor ERF039 [Cucumis sativus] >KGN55849.1 hy...	[more]
XP_022923459.1	1.6e-88	81.50	ethylene-responsive transcription factor ERF039-like [Cucurbita moschata]	[more]
KAG6577676.1	4.4e-86	79.65	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CaUC10G181980.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUK8	8.4e-40	55.68	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	2.7e-38	53.37	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	8.7e-37	48.72	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LBQ7	1.5e-36	44.49	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q39127	1.4e-34	51.50	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CaUC10G181980.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TD44	1.2e-94	83.63	Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BK05	1.2e-94	83.63	ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L472	6.3e-91	80.97	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019400 PE=...	[more]
A0A6J1E6G7	7.7e-89	81.50	ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1HN35	1.8e-85	77.31	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CaUC10G181980.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16750.1	5.9e-41	55.68	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	1.9e-39	53.37	ERF family protein 38	[more]
AT3G60490.1	6.1e-38	48.72	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	1.0e-37	44.49	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	9.8e-36	51.50	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 45..56 score: 70.15 coord: 67..83 score: 66.2
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 44..107 e-value: 1.3E-36 score: 137.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 44..94 e-value: 5.0E-13 score: 49.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 44..101 score: 22.484093
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 45..103 e-value: 2.91543E-33 score: 112.75
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 44..102 e-value: 2.2E-24 score: 87.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 14..192
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 14..192
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 44..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC10G181980	CaUC10G181980	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G181980.1-exon	CaUC10G181980.1-exon-Ciama_Chr10:3057615..3058295	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G181980.1-cds	CaUC10G181980.1-cds-Ciama_Chr10:3057615..3058295	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC10G181980.1	CaUC10G181980.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity