CaUC09G173030.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCTCGGTGGATTCATGTGCCACTCTCTGCCCGCCACTGCAGTCTGTGTCCCGGCTGATCCCCACTCTGCAGTCGTGTCGAGAAGGTTGGCTAGACCCGACTATGCTAATACTGGCAATGGCAACCGCGCGAGGTTGATGAGCAATGTTGTGAAGTACTCGAAGCTTGTCGAGTCTCCGAGCTTGAGTGTTCGAAGCGAAGGAACGAACACCGACATGAAGAAACCGGTGCCAGTTATGGTTTCTTCGCTGCCGGAGAATGTCTTCCAAGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCACCAAAATGGAAGGTAGAAATTCATATTCATGATATTCTTTCTATTTTGTAGGTCAAAGATTAGATTAAAATATAAATGTGGTTGTTGATATTGAATTTTCCATGTTTCAATTTAAAATATAATAAATTATTTTATGTTGTTGAGTTATAAACCTTAATACTAATTTAATATTAATTTTGAACTTTCTCCAATTTAAGATATGTGGAAGGGTACATCGACATATAACTAAATATTTTAGTTCTTGGTTGAGAGTATAATTAATGTTTTTTTAATAATAAAAGTGGTAATATTATTATTTCTTTGCTAATAATTTTTGCACTATAAAGCAAATTATGCCCAATAACTATTAAATATACTTCTTTTTTTTTTTTTTTTTTTTAGTTTTGATCATTGTAGAAAACATCTTAGTTATATTATAAGATCTACGTTTAAATTTTTAAATATTCTCTTAATTTCATTACTGTTGCTCTTTGTTTTAAAAAATAAAAAATAAAAAATAAAAAATTATATTAAACGACATGCAAAAATTTCTGAATGTTATGTTTGTCATTGATTCCTAACCGAGATTTTGACTTTAATGTTTGGAGTTTAGTAATTGCTAATACTCAAAAGAAAAATACTAAAATAGAACCTTTTAAATTTTAGTGAAAAAATTGTAAAAAAAGAAAATTTAAGGATGAAAGTGAAATTCATATTTTTGTTTTACTAAAATTCTATTGTTGTAGAGTGTAATGACATATACATGGTAATTGACAGGAGTGACGTCATTTAGCATAGATCTTGAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTATTTCTAAGGTGAAAAGAGCTGAGTTATGGCCAATGTTAAACTAA ATGAAGAAGCTCGGTGGATTCATGTGCCACTCTCTGCCCGCCACTGCAGTCTGTGTCCCGGCTGATCCCCACTCTGCAGTCGTGTCGAGAAGGTTGGCTAGACCCGACTATGCTAATACTGGCAATGGCAACCGCGCGAGGTTGATGAGCAATGTTGTGAAGTACTCGAAGCTTGTCGAGTCTCCGAGCTTGAGTGTTCGAAGCGAAGGAACGAACACCGACATGAAGAAACCGGTGCCAGTTATGGTTTCTTCGCTGCCGGAGAATGTCTTCCAAGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCACCAAAATGGAAGGAGTGACGTCATTTAGCATAGATCTTGAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTATTTCTAAGGTGAAAAGAGCTGAGTTATGGCCAATGTTAAACTAA ATGAAGAAGCTCGGTGGATTCATGTGCCACTCTCTGCCCGCCACTGCAGTCTGTGTCCCGGCTGATCCCCACTCTGCAGTCGTGTCGAGAAGGTTGGCTAGACCCGACTATGCTAATACTGGCAATGGCAACCGCGCGAGGTTGATGAGCAATGTTGTGAAGTACTCGAAGCTTGTCGAGTCTCCGAGCTTGAGTGTTCGAAGCGAAGGAACGAACACCGACATGAAGAAACCGGTGCCAGTTATGGTTTCTTCGCTGCCGGAGAATGTCTTCCAAGTGGTGGTTATGAGGGTGGCGCTTCACTGTCAAGGCTGTGCTAGTAAAGTTAAGAGACATCTCACCAAAATGGAAGGAGTGACGTCATTTAGCATAGATCTTGAGGCCAAGAGAGTGACTGTGATGGGACATATTTCACCGCTGGGTGTTTTGGAGAGTATTTCTAAGGTGAAAAGAGCTGAGTTATGGCCAATGTTAAACTAA MKKLGGFMCHSLPATAVCVPADPHSAVVSRRLARPDYANTGNGNRARLMSNVVKYSKLVESPSLSVRSEGTNTDMKKPVPVMVSSLPENVFQVVVMRVALHCQGCASKVKRHLTKMEGVTSFSIDLEAKRVTVMGHISPLGVLESISKVKRAELWPMLN Homology
BLAST of CaUC09G173030.1 vs. NCBI nr
Match: XP_038888352.1 (heavy metal-associated isoprenylated plant protein 35-like [Benincasa hispida]) HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66 Identity = 135/159 (84.91%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. NCBI nr
Match: KAA0031499.1 (heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa] >TYK06952.1 heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60 Identity = 132/163 (80.98%), Postives = 140/163 (85.89%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. NCBI nr
Match: XP_011658781.1 (uncharacterized protein LOC105436087 [Cucumis sativus] >KGN43698.1 hypothetical protein Csa_017376 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 1.8e-57 Identity = 130/164 (79.27%), Postives = 141/164 (85.98%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. NCBI nr
Match: XP_022967633.1 (heavy metal-associated isoprenylated plant protein 35-like [Cucurbita maxima]) HSP 1 Score: 221.1 bits (562), Expect = 6.9e-54 Identity = 118/158 (74.68%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. NCBI nr
Match: KAG7011417.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53 Identity = 122/161 (75.78%), Postives = 131/161 (81.37%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.4e-19 Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17 Identity = 40/64 (62.50%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.7e-16 Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.8e-11 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10 Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy TrEMBL
Match: A0A5A7SQB0 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002650 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.2e-61 Identity = 132/163 (80.98%), Postives = 140/163 (85.89%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy TrEMBL
Match: A0A0A0K2I2 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G060180 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 8.5e-58 Identity = 130/164 (79.27%), Postives = 141/164 (85.98%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy TrEMBL
Match: A0A6J1HVM5 (heavy metal-associated isoprenylated plant protein 35-like OS=Cucurbita maxima OX=3661 GN=LOC111467075 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.3e-54 Identity = 118/158 (74.68%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy TrEMBL
Match: A0A6J1DJK2 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Momordica charantia OX=3673 GN=LOC111021696 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.5e-51 Identity = 117/157 (74.52%), Postives = 126/157 (80.25%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ48 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464027 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49 Identity = 115/154 (74.68%), Postives = 124/154 (80.52%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. TAIR 10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 101.3 bits (251), Expect = 7.4e-22 Identity = 49/106 (46.23%), Postives = 74/106 (69.81%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20 Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20 Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-19 Identity = 40/64 (62.50%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of CaUC09G173030.1 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-19 Identity = 40/64 (62.50%), Postives = 54/64 (84.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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