CaUC09G170700.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTACAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCCTCCACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCATTTACTATCTCATTTCAAGTTTCTTCGCCCCCTCTGACTACGGAACCCACACTAGGGATTTGGGAGAGCAGCTCCAGCCTCTTCCTCCTCCTGTCCAAGTCGGTGAAATTTCTGAAGATGAGTTGAAGCAATACGATGGCTCCGATCCCAAGAAGCCTCTTCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGTCAGTTGAGGGTTTTCTTTTATTTCGAAAATTGTCCTCTCTGTTTTAGGTATTTTAGGTTTCGATGATCGTGATAAGTTTTTGATTCGGTTTCAATTTGTTTTTTGAGTCAACGTGTTTGTTGAGTTCTCTGATGGCATGTGGAATATGAATATCAAGTTGGTTTTAGGCTTACAGAAGATTTAATTGATTTGGTGCTTCGTTTTACCCTCTACAGCTTTCCTTTTTTGTTCAAACTGATTCCTTAAAAATGAAAATTAATTTGGTCCTACTGTATTGAACCACTATCAAAGGTTTTTAGGCTATTTCTAAATCAAAGGTTTTTAGGCTATTTCTAATTCGTTCTATTTTCCTGTTACATATACCAAGAACCATGCATTGTCTGTTTGATGCAAGTTATAATGAAAGAAGATTGTTGATAGTTTTTGTACAATTTGTGCTTCTTTCTTGTTGTACGAATTTATAAGACAAGGGGTTCGAGCTCAAAACGGAATTGACTCTTGTTGGTTGATTTCGTTTCCAATAAGAAACTTCTTGAGTTTTGAGTCATGGACTTCAATTCAAACTTAAATCTCTTTCGTGGTGGACGAGAAAACCCCTCTAAGTAGATTGTGAGACCAAACTTTTTTCTTTTTTGTTCATCTGAATGTTAATTTCGATTTTTCTTCATTACTTCTTATAGCTGTGATTTGCCATGTATCTGGTTTTGAAAATATTTTATACCGATTGTCGTTTTTGACTTTCAAATGACGGCCAGGGTGTTTCCAGCATATAGAATTAGTATAGTATATGATGTCCACAGGCAATAGTGTCGTGTTTCACGTGTTATTTTGGGTGCTTGTAGAGTGGTCGTATATAGAATCCTTCTTTTATTTGGGATCGGATAAGGTTTCTGCTACATGTACAATCAATCACTTTTTACAAATTACAAGCTCATGATTTCAAATCACTATTTGCAAGCGTTTGATTTGAAAGACAGAATGAGTTTAAGTGAAAACAATGCAGAAAGTTAAACTTTCTTTTTGAAAAACTAGATATTATCTTGGACATGCATTCAATTTTTTGTAATATCTTTGGCTATCTATCTTCATAAAGAGTTTCTTCTGATTATGGATTATTCACTACACTAAGGCTATAGACACGAATATTCAATATTTTGCAGTGTCTTGCTCTCTTGTGTGTGAGTCTAAATTGGAGAAAATTGCACTTGTATCCTTCAGATTGTAGTCTTGCGTACGCCCATAGATAGTGCTTCGAATTTCATATTTCTCTTAATCAAACTTTCTATTGCTTTGCTATCATCTCTTCTAACCGGCTCTACTTGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCTAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAAAAAGATCTAACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGATTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACCGTCAAGAAGTCAGTTGCTGAAGGTGATGCTGCAGCTGGTGAGCCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCCCAAGACAGTCACTCGGAATCTCGAGATGATAAAGCTGAGGAAACCCCTGCTGCTGCAAATGTCGATTAA ATGGCTCTACAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCCTCCACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCATTTACTATCTCATTTCAAGTTTCTTCGCCCCCTCTGACTACGGAACCCACACTAGGGATTTGGGAGAGCAGCTCCAGCCTCTTCCTCCTCCTGTCCAAGTCGGTGAAATTTCTGAAGATGAGTTGAAGCAATACGATGGCTCCGATCCCAAGAAGCCTCTTCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCTAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAAAAAGATCTAACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGATTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACCGTCAAGAAGTCAGTTGCTGAAGGTGATGCTGCAGCTGGTGAGCCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCCCAAGACAGTCACTCGGAATCTCGAGATGATAAAGCTGAGGAAACCCCTGCTGCTGCAAATGTCGATTAA ATGGCTCTACAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCCTCCACCTTCTTCACAGTCTTGGCTCTTGGATTGGCCATTTACTATCTCATTTCAAGTTTCTTCGCCCCCTCTGACTACGGAACCCACACTAGGGATTTGGGAGAGCAGCTCCAGCCTCTTCCTCCTCCTGTCCAAGTCGGTGAAATTTCTGAAGATGAGTTGAAGCAATACGATGGCTCCGATCCCAAGAAGCCTCTTCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCTCAGAGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCTAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAAAAAGATCTAACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGATTGGGAATACAAATTCATGAGTAAATATGTTAAAGTTGGGACCGTCAAGAAGTCAGTTGCTGAAGGTGATGCTGCAGCTGGTGAGCCTGCAGAATCAAGCACTGCTGAAGTTAGCAAACCTGCCCAAGACAGTCACTCGGAATCTCGAGATGATAAAGCTGAGGAAACCCCTGCTGCTGCAAATGTCGATTAA MALQVWETLKEAIVAYTGLSPSTFFTVLALGLAIYYLISSFFAPSDYGTHTRDLGEQLQPLPPPVQVGEISEDELKQYDGSDPKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTVKKSVAEGDAAAGEPAESSTAEVSKPAQDSHSESRDDKAEETPAAANVD Homology
BLAST of CaUC09G170700.1 vs. NCBI nr
Match: XP_038888418.1 (membrane steroid-binding protein 2-like [Benincasa hispida]) HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108 Identity = 204/213 (95.77%), Postives = 211/213 (99.06%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. NCBI nr
Match: XP_022971922.1 (membrane steroid-binding protein 2-like [Cucurbita maxima]) HSP 1 Score: 375.9 bits (964), Expect = 2.2e-100 Identity = 199/215 (92.56%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. NCBI nr
Match: XP_022952639.1 (membrane steroid-binding protein 2-like [Cucurbita moschata] >XP_022952640.1 membrane steroid-binding protein 2-like [Cucurbita moschata]) HSP 1 Score: 375.6 bits (963), Expect = 2.9e-100 Identity = 200/217 (92.17%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. NCBI nr
Match: XP_004148349.1 (membrane steroid-binding protein 1 [Cucumis sativus] >KGN60482.1 hypothetical protein Csa_001989 [Cucumis sativus]) HSP 1 Score: 374.4 bits (960), Expect = 6.5e-100 Identity = 193/213 (90.61%), Postives = 202/213 (94.84%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. NCBI nr
Match: KAG6571809.1 (Membrane steroid-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011504.1 Membrane steroid-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 374.0 bits (959), Expect = 8.5e-100 Identity = 199/217 (91.71%), Postives = 203/217 (93.55%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 5.6e-70 Identity = 144/224 (64.29%), Postives = 168/224 (75.00%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.9e-68 Identity = 145/221 (65.61%), Postives = 167/221 (75.57%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 254.6 bits (649), Expect = 9.9e-67 Identity = 145/222 (65.32%), Postives = 165/222 (74.32%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.3e-49 Identity = 108/176 (61.36%), Postives = 123/176 (69.89%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.7e-23 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy TrEMBL
Match: A0A6J1I394 (membrane steroid-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470596 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100 Identity = 199/215 (92.56%), Postives = 204/215 (94.88%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy TrEMBL
Match: A0A6J1GMC2 (membrane steroid-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455271 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100 Identity = 200/217 (92.17%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy TrEMBL
Match: A0A0A0LIG2 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G915110 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.2e-100 Identity = 193/213 (90.61%), Postives = 202/213 (94.84%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy TrEMBL
Match: A0A5A7TA90 (Membrane steroid-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00110 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99 Identity = 194/214 (90.65%), Postives = 202/214 (94.39%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ79 (membrane steroid-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103503452 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99 Identity = 194/214 (90.65%), Postives = 202/214 (94.39%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 ) HSP 1 Score: 265.4 bits (677), Expect = 4.0e-71 Identity = 144/224 (64.29%), Postives = 168/224 (75.00%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 ) HSP 1 Score: 254.6 bits (649), Expect = 7.0e-68 Identity = 145/222 (65.32%), Postives = 165/222 (74.32%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 ) HSP 1 Score: 254.2 bits (648), Expect = 9.2e-68 Identity = 130/171 (76.02%), Postives = 143/171 (83.63%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 ) HSP 1 Score: 109.0 bits (271), Expect = 4.8e-24 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CaUC09G170700.1 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 ) HSP 1 Score: 75.5 bits (184), Expect = 5.8e-14 Identity = 40/122 (32.79%), Postives = 65/122 (53.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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