Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGTTAGAGCTTGATTTAAAGCTCCAAATTCAAAGGTAAGCTACTCCTAAGGTCCTTCTAACGTTCTATGGCTTTTTATTTGATTGCTATTGGTCAAAATTTTTTATTTTAAGCTCTGGAACTTCTCGCCAAACAGGGGTATCGAGGAGGTATTTCAACGATTCCGGGAGTTCTAGAGCAAATTGGTCGGCCAAATTTGGAGGTTGTTTGCTTCTACTAATGGATAAGAGGTTTATATAGGTTAATTGAGCTTTTGTTGGCTGAAAATCAGTGAATTTTAGTCTAAAATTGTTGCTTGAAGAACATAGGTCAAATCTGAAAAATTGAGGTAAGAGGTTGAAGAAGAAGCCTATTCGTCATCTATTGTCACATCATTAGAGGGTAGAATGGTTGATTTTCAGGTTGACTTTGTAATAATTTTAGGTTAATTAAGGTGTTCTTGAGCATGATTTGTGATCCAATTGGTGTTATTAGGATACTTTAACCCTTAAATTAGAGTAAATTGGGATCCTAATTTAAATTTGAAGTTCATTAAGGGGATAATTTGTAAAGTAAACCCTAATTATGGTTAATGAGGAAATTATATAAAATTGAACTAAATTAAGGTTAATTAAGATGTTCTTATGCTTATTTAAGTTCTCATGGATATCAATAAGATCTTTTGACCTTGGGCTTGAATTAATTTGGAATCTTAAGTTAATTTTAAGGTAATTAAAGGATTAAAGTGTAAGGACATGAAACCTAAAATTGGAATTAGGGTTTGGGAAGAATTAAGTGTAATTGGTATTTTTAGGGCACTAAAAACCTAGAATTGAATTAATTTGGAAACTTAAATTAATTTGGAATTTGATAAGGAACTAAATTGTAAGTAAACCTCAAATTTGACAAAATTAGGGTTATTGGGAAGTTAAATTGGACATACTTGAGGGTAATTATGAAATATTTGGATTAGGGTCGATTAGGAAATTACCAAGGAGTTATTAATTAAATTTCAAGATTATCAGGAATCTGAGGAACAAGAAATTTGGGGAAAAGCTAGTTGACGGTGAGTGACATATTTTTAGTTTTAAATGAATTGTTTTATGATCTTTATCCATGATTTCCAATGAAAATGAGTTTTCCCACTGTTTTTTTCTTAAACATTGAGCATGATTCGTTGATTTATACTTTTAATTCCTAGTATGGAAATGTTAAAATTATAAGGAAGTTATATGTTTTCTTATGAATAAATGTTGACAAGCCTATATGGTTTGAATGATGATAACGTATGTTATGCTAAGAATGATTTTATGCTTGCTAATGATGAATTCTAAGACTTTTAAAGGATGCTTCAAACCATTATGCCTTGTACCCTTGATGTGATTGTCCTGGTGTGAATATGTTTTTGTAGCACTATAGGTTGCTAGAGGATTCCCAGTACTGAAGGATGAAAAA mRNA sequence ATGGACTCTGGAACTTCTCGCCAAACAGGGGTATCGAGGAGGTATTTCAACGATTCCGGGAGTTCTAGAGCAAATTGGTCGGCCAAATTTGGAGAGGTTGAAGAAGAAGCCTATTCGTCATCTATTGTCACATCATTAGAGGGTAGAATGGTTGATTTTCAGGTTGCTAGAGGATTCCCAGTACTGAAGGATGAAAAA Coding sequence (CDS) ATGGACTCTGGAACTTCTCGCCAAACAGGGGTATCGAGGAGGTATTTCAACGATTCCGGGAGTTCTAGAGCAAATTGGTCGGCCAAATTTGGAGAGGTTGAAGAAGAAGCCTATTCGTCATCTATTGTCACATCATTAGAGGGTAGAATGGTTGATTTTCAGGTTGCTAGAGGATTCCCAGTACTGAAGGATGAAAAA Protein sequence MDSGTSRQTGVSRRYFNDSGSSRANWSAKFGEVEEEAYSSSIVTSLEGRMVDFQVARGFPVLKDEK
Homology
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CaUC09G170520.1-exon | CaUC09G170520.1-exon-Ciama_Chr09:16510402..16510437 | exon |
CaUC09G170520.1-exon | CaUC09G170520.1-exon-Ciama_Chr09:16511435..16511502 | exon |
CaUC09G170520.1-exon | CaUC09G170520.1-exon-Ciama_Chr09:16511634..16511722 | exon |
CaUC09G170520.1-exon | CaUC09G170520.1-exon-Ciama_Chr09:16511834..16511838 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CaUC09G170520.1-cds | CaUC09G170520.1-cds-Ciama_Chr09:16510402..16510437 | CDS |
CaUC09G170520.1-cds | CaUC09G170520.1-cds-Ciama_Chr09:16511435..16511502 | CDS |
CaUC09G170520.1-cds | CaUC09G170520.1-cds-Ciama_Chr09:16511634..16511722 | CDS |
CaUC09G170520.1-cds | CaUC09G170520.1-cds-Ciama_Chr09:16511834..16511838 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CaUC09G170520.1 | CaUC09G170520.1-protein | polypeptide |
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