CaUC09G163650.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTGTTGGACTCTAATTGGGCTAGACAATACATGGGTGCAGACTCCAAAGGGCTCCCAAGTTTATTTTTTTTGCACATTTATTATTGAGCACTTGGCAGTGCAGTCCGGGGTGCATAAGTATTTTCCTATGCCAAATATGATGCATGGCATTCACTCTCCAACTGGCGGCGTAGCTGGCAACAGTCGGTGCCACGTCGAAATAGAAAGCCTATTATAAAAGACGTGCCGTCGTCCGTCTCTTCTCCAAAAAATTTCGTCCATCTCTGACGCAAAAGCCGTGATTCTTGAAGCTTCGTTTCAATGGCGACTGTAGATAAGCAAGTAATGGTAGTCGGAATCGATGATAGTGCGCACAGTCTCTACGCTCTCGAGTGGACCTTAGACCATCTCATCGTTCCAATCTCTCCGGTTAACTCTCCGTTCAAGCTCATCGTTGTTCACGCCAAACCTTCCCCTTCCTCCGCCGTCAGTCTCGCCGGACCTGGTAATTGATTTTCATTTTCTTCTTGATTTCTGGTTGATTGATCATTAATTTATTGAGGATCCGTAAATAAACCGGTGGTAACGAGTGTCGATTGCAGGAGCGGCTGAGGTTCTGCCCTATGTGGATTCGGACTTGAAGAAGATTGCTGCGCGAGTAATCGAAAAGGCGAAGGAGATTTGCCTCGCTAGATCGGTAATCCACTCGATCCTTTTCAATTAATAACCTGATTTACTTGTTGAGCGTTCTAAGTTTTGCTTATTTAAACCGATTCAGTTATTTATTGCGCTGTTGCTGGTAACATTTGTGGATTTAGGATCGCTTTCTTTTCCAGACATAATGTGAGCAGATTGAAATGAAAATTAGTTGGAAAGAAAATTTGTGCACTGACCATAAAACCTACAAACTTTGTTTAATAAAAATGATTTTCAATTGAAATAGGAATAGGAAGTATTAACAATCTAAGATTATCATTATATTGTTCATTCATGCTATAATTGTAGGACTGAAAAAGGTAGAAAGAAAAGGAGTTCATGTAATAAAGAATAAACAAAAGTAAAAAGTGATTGTTACCTAATAAAATTGATTAAGAATGAAATTCCTTATCCATGATTTAACATATCATGGTCTAGAAACATCCAGGATAGCCATACAACCATATTAGTATTTTACTGTTGATATGATTTTTTTTAGAAAAAATTTAAATTCTAAGTGGATTTGCATGTTTGCATTCATGCTATCATAGTAGGACTGTAAAAGGTAGAAGGAAAAGGAATTAATGTAATAAAGAATAAATAAAAGTAAAAAGTGATTGTTGCCTAATAAAATTTATCATGATCTAGAAACATCCAGGACAACTATACAACTATGATTGGTATTTATTGTTGACATGATTCTTCTTTTTTATTATTAAAATTCTAATGGATTTACATATTTAATACAGCAATGGAAAGGGGATATATTAAAACTAAGGCCAACTGGGTGTAGCTAGTTTGGCTCTTCAATTTATGTGTCCGACTTCCAGTGGTACATAACGATGGAACTACACTTTTGTAATAATACATTTAACTAAAAAGTGGAAATGTTTTTCATATAATTTGTAATGATACCCCTAGCTAAAAAAGTTGGAATATTTTTTCTTCATAGAATTCGTGTACCATTAAAATGGGAAAGATGCACTGGATTCTGATTGGTGTTTAAACTCTAAAGCAGCTTTGGAGAAAGGGTCGAGAGAACTTTATCCCATCTACTATTGAAGATTTTTGTTCTGAAATTCTGTAATATATGTGACAATATCCAGGTGCATGATGTTGTGTTGGAGGTGATAGAAGGAGATGCCAGGAATGTACTTTGTGAGGCTGTAGAAAAGCACCATGCTTCTATGCTGGTTGTTGGAAGCCACGGATATGGAGCTATAAAGAGGTACTTCTCTATAAATCAATACTTATTTTAAGAGTTTATGAAATCAGAAATATGGATATAATAGGCTAAAAGCTTGGAAAAGCGTGACAGAACCCAATTGATGATCTGATCTCAGATGTTAGAATCTGGTAAGAATTTCAGGTCCTATTTGTTTAGAAAACGTTCTTACAACTTGAAAAGCTGATAAGGAAACAAATAAAACAAGTACTCAAAACTTTAAATCACTAGCGGGGAGTTTTTTTCTTTTATAGCAAAATCTATGAGGACCGTTGATAGACTCTATTTTTATTCACTTTTATTAGTGATAAACTCTCTTTTCATTTATTTGGTCAAAATGTCTGGTCATTATTGAGAATAATGAAATAATTTATTAAGTTGAATCTTTTTTTTTTTTTTTTTTTTTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGGCAGGGCTGTTTTGGGCAGCGTAAGTGATTATTGTGCTCATCATGCCCATTGCACCGTGATGATAGTAAAGAAGCCTAAAACCAAGCACTAGATCTCATTGCATTTACTCCTTTCCTCGGGTGATAGTGGGATCCCAAAGGATATCGTAGTTTGGAGAATCCTACAAATTTGTATATCATCAAATAAATGAAGGTTTGGTATTGATGCGAATCGTGATGCGTAAAGCTCTAATAATAAAGCTTCTTTTATTTGTGTGAATTGAGAGTGGTTTAAGTTGTGGAAATTTTCAAAGTCCTCTGTTCTGCTCTGTCTTGTGTCTTGAGTAGGGTTCTGTGAACTTGTACTGAAATCTTTTTAAAGTTTGTTTGGGTAACCAAATACCATGTATTGAGTTCCTTTTGCCATCTTTTTTAGGTGGGATACACATATTCAGGGTAACATTTGAAATGAACTCCACATTAAATTAATGATGTAGCTCCGAGTCAAACGCAAATTGAATAGAAACGTAACGAAATGAATATGGCAATTAAATTTAGAGACTA TTTTTTGTTGGACTCTAATTGGGCTAGACAATACATGGGTGCAGACTCCAAAGGGCTCCCAAGTTTATTTTTTTTGCACATTTATTATTGAGCACTTGGCAGTGCAGTCCGGGGTGCATAAGTATTTTCCTATGCCAAATATGATGCATGGCATTCACTCTCCAACTGGCGGCGTAGCTGGCAACAGTCGGTGCCACGTCGAAATAGAAAGCCTATTATAAAAGACGTGCCGTCGTCCGTCTCTTCTCCAAAAAATTTCGTCCATCTCTGACGCAAAAGCCGTGATTCTTGAAGCTTCGTTTCAATGGCGACTGTAGATAAGCAAGTAATGGTAGTCGGAATCGATGATAGTGCGCACAGTCTCTACGCTCTCGAGTGGACCTTAGACCATCTCATCGTTCCAATCTCTCCGGTTAACTCTCCGTTCAAGCTCATCGTTGTTCACGCCAAACCTTCCCCTTCCTCCGCCGTCAGTCTCGCCGGACCTGGAGCGGCTGAGGTTCTGCCCTATGTGGATTCGGACTTGAAGAAGATTGCTGCGCGAGTAATCGAAAAGGCGAAGGAGATTTGCCTCGCTAGATCGTTATTTATTGCGCTGTTGCTGGTAACATTTGTGGATTTAGGATCGCTTTCTTTTCCAGACATAATCTTTGGAGAAAGGGTCGAGAGAACTTTATCCCATCTACTATTGAAGATTTTTGTTCTGAAATTCTGTAATATATGTGACAATATCCAGGTGCATGATGTTGTGTTGGAGGTGATAGAAGGAGATGCCAGGAATGTACTTTGTGAGGCTGTAGAAAAGCACCATGCTTCTATGCTGGTTGTTGGAAGCCACGGATATGGAGCTATAAAGAGGGCTGTTTTGGGCAGCGTAAGTGATTATTGTGCTCATCATGCCCATTGCACCGTGATGATAGTAAAGAAGCCTAAAACCAAGCACTAGATCTCATTGCATTTACTCCTTTCCTCGGGTGATAGTGGGATCCCAAAGGATATCGTAGTTTGGAGAATCCTACAAATTTGTATATCATCAAATAAATGAAGGTTTGGTATTGATGCGAATCGTGATGCGTAAAGCTCTAATAATAAAGCTTCTTTTATTTGTGTGAATTGAGAGTGGTTTAAGTTGTGGAAATTTTCAAAGTCCTCTGTTCTGCTCTGTCTTGTGTCTTGAGTAGGGTTCTGTGAACTTGTACTGAAATCTTTTTAAAGTTTGTTTGGGTAACCAAATACCATGTATTGAGTTCCTTTTGCCATCTTTTTTAGGTGGGATACACATATTCAGGGTAACATTTGAAATGAACTCCACATTAAATTAATGATGTAGCTCCGAGTCAAACGCAAATTGAATAGAAACGTAACGAAATGAATATGGCAATTAAATTTAGAGACTA ATGGCGACTGTAGATAAGCAAGTAATGGTAGTCGGAATCGATGATAGTGCGCACAGTCTCTACGCTCTCGAGTGGACCTTAGACCATCTCATCGTTCCAATCTCTCCGGTTAACTCTCCGTTCAAGCTCATCGTTGTTCACGCCAAACCTTCCCCTTCCTCCGCCGTCAGTCTCGCCGGACCTGGAGCGGCTGAGGTTCTGCCCTATGTGGATTCGGACTTGAAGAAGATTGCTGCGCGAGTAATCGAAAAGGCGAAGGAGATTTGCCTCGCTAGATCGTTATTTATTGCGCTGTTGCTGGTAACATTTGTGGATTTAGGATCGCTTTCTTTTCCAGACATAATCTTTGGAGAAAGGGTCGAGAGAACTTTATCCCATCTACTATTGAAGATTTTTGTTCTGAAATTCTGTAATATATGTGACAATATCCAGGTGCATGATGTTGTGTTGGAGGTGATAGAAGGAGATGCCAGGAATGTACTTTGTGAGGCTGTAGAAAAGCACCATGCTTCTATGCTGGTTGTTGGAAGCCACGGATATGGAGCTATAAAGAGGGCTGTTTTGGGCAGCGTAAGTGATTATTGTGCTCATCATGCCCATTGCACCGTGATGATAGTAAAGAAGCCTAAAACCAAGCACTAG MATVDKQVMVVGIDDSAHSLYALEWTLDHLIVPISPVNSPFKLIVVHAKPSPSSAVSLAGPGAAEVLPYVDSDLKKIAARVIEKAKEICLARSLFIALLLVTFVDLGSLSFPDIIFGERVERTLSHLLLKIFVLKFCNICDNIQVHDVVLEVIEGDARNVLCEAVEKHHASMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH Homology
BLAST of CaUC09G163650.1 vs. NCBI nr
Match: XP_008451574.1 (PREDICTED: universal stress protein A-like protein [Cucumis melo]) HSP 1 Score: 286.2 bits (731), Expect = 2.3e-73 Identity = 156/213 (73.24%), Postives = 160/213 (75.12%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. NCBI nr
Match: XP_004136030.1 (universal stress protein PHOS34 [Cucumis sativus] >KGN44933.1 hypothetical protein Csa_015987 [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72 Identity = 154/213 (72.30%), Postives = 159/213 (74.65%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. NCBI nr
Match: XP_038899903.1 (universal stress protein PHOS34-like [Benincasa hispida]) HSP 1 Score: 279.6 bits (714), Expect = 2.2e-71 Identity = 151/213 (70.89%), Postives = 158/213 (74.18%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. NCBI nr
Match: KAA0067998.1 (universal stress protein A-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68 Identity = 148/205 (72.20%), Postives = 152/205 (74.15%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. NCBI nr
Match: TYK18129.1 (universal stress protein A-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68 Identity = 148/205 (72.20%), Postives = 152/205 (74.15%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 8.8e-07 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06 Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06 Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06 Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy Swiss-Prot
Match: P72745 (Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1101 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.8e-05 Identity = 21/59 (35.59%), Postives = 34/59 (57.63%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy TrEMBL
Match: A0A1S3BRU9 (universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103492814 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73 Identity = 156/213 (73.24%), Postives = 160/213 (75.12%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy TrEMBL
Match: A0A0A0K626 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G396480 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 5.6e-73 Identity = 154/213 (72.30%), Postives = 159/213 (74.65%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy TrEMBL
Match: A0A5A7VJK7 (Universal stress protein A-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001870 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68 Identity = 148/205 (72.20%), Postives = 152/205 (74.15%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy TrEMBL
Match: A0A5D3D3W1 (Universal stress protein A-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00590 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68 Identity = 148/205 (72.20%), Postives = 152/205 (74.15%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. ExPASy TrEMBL
Match: A0A6J1D1G2 (universal stress protein PHOS34-like OS=Momordica charantia OX=3673 GN=LOC111016397 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67 Identity = 144/213 (67.61%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 215.7 bits (548), Expect = 3.6e-56 Identity = 120/213 (56.34%), Postives = 134/213 (62.91%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 3.1e-23 Identity = 72/207 (34.78%), Postives = 97/207 (46.86%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22 Identity = 73/207 (35.27%), Postives = 98/207 (47.34%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-22 Identity = 72/207 (34.78%), Postives = 98/207 (47.34%), Query Frame = 0
BLAST of CaUC09G163650.1 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 94.7 bits (234), Expect = 9.3e-20 Identity = 66/209 (31.58%), Postives = 96/209 (45.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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