CaUC09G162890.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G162890.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMultidrug resistance protein ABC transporter family protein, putative
LocationCiama_Chr09: 4743327 .. 4745521 (-)
Sequence length978
RNA-Seq ExpressionCaUC09G162890.1
SyntenyCaUC09G162890.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATCGTTTTGTTCTAGTTTATATCTCGTATTGATTAATGCTTCTAACAATCGGTATAAACATAATAACACAAAATCAAATTAAAAAAAAAAAAAAAAAAAGTTGTGTAACATTCTATATTAACTCTATTTTCTCCAAATATTTTCATTATATTATATATGAAACCTTGTTAATAATAATAATGCACATGTAATATAATGTTTCCAAATGGCTTCAAAAGTTGAACAACCAATGAGAAAATTTCTTCTCAAATTTCTTCTCCTTAATTGTATCCAAGCTTGGCTTCCAACCTCTGCCGGATAATTGTCTGCTCAAATACTCCGGCCTCCCCTCCGCCGCCATCTCCATTTCCCATCGATCTTCCTCGCCTTCGATCTTCACAAGATCTTCCTTTTTAATCTCTGCTCGGGCGTCTCTTATCGTCGTTATCGTCGTAGTTGTTGCTGTGCATGCCCTTGCAAACCAAGGAAGAACCTTAGAAGACGAAAGGAGGAGAGAGCGCGACCGTAAAGCCGAGTTGGCACATACAAGAACACGCCGGATTTCCTCCGACGACAATGATGCTGGCTTGCCTCCTCTTATAGGTAGCATCATATAAACCTTGTTCACAATATGAAATGTAAATGATTCAACATATATATTGTAATTATCCCACTTTAATGTTATGATTCTAAATCCAAATAAAAATTATAATCAGAAATTTTTTCTGCAAAATTATAAGGTAATTAAGCATCTATAACACTCTTTTAGGTACTTATTAATCTCATTATTTTAAATGCATTAGAATTAAGAAAGCAATTGTTTGTCATAAATTAATAATATTAGCATGTTTTGACCAACACAAAAGGTACAATAAACAATAAATACAAACATGTGGAATATAATCTAAAGGAAAAAAAATAATGAGATTAATAAGTACCTAAAAGAGTGTTATAGATGCTTAATTACCTTATAATTTTGCAGAAAAAATTTCTGATTATAATTTTTATTTGGATTTAGAATCATAACATTAAAGTGGGATAATTACAATATATATGTTGAATCATTTACATTTCATATTGTGAACAAGGTTTATATGATGCTACCTATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAGGAAATCCGGCGTGTTCTTGTATGTGCCAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCGTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGGCATGCACAGCAACAACTACGACGATAACGACGATAAGAGACGCCCGAGCAGAGATTAAAAAGGAAGATCTTGTGAAGATCGAAGGCGAGGAAGATCGATGGGAAATGGAGATGGCGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAATTTTCTCATTGGTTGTTCAACTTTTGAAGCCATTTGGAAACATTATATTACATGTGCATTATTATTATTAACAAGGTTTCATATATAATATAATGAAAATATTTGGAGAAAATAGAGTTAATATAGAATGTTACACAACTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTATGATTATTATAAACCTTTGAGTTCACTAACAAACCTTCTTCGAGTCGAGCTTTTCGTCTGCAGGCAACGGGGTCGGCCGTTTTCCAACGTCGACAGTACTTTTGCAGATCTCGACGACAACTTGGCGTGGGTGTTCGAGCATCAACTCGGCCACTGTGAACGGCTCGTTGAATTCTTGGATGGAACCGTCGGAGAGAACTACTTTTCCGACGCCAGAGACGGAGGTGATGTTGCCCATCGGAAAATGATCGGAAGTTGA

mRNA sequence

ATGTTTATCCTTGGCTTCCAACCTCTGCCGGATAATTGTCTGCTCAAATACTCCGGCCTCCCCTCCGCCGCCATCTCCATTTCCCATCGATCTTCCTCGCCTTCGATCTTCACAAGATCTTCCTTTTTAATCTCTGCTCGGGCGTCTCTTATCGTCGTTATCGTCGTAGTTGTTGCTGTGCATGCCCTTGCAAACCAAGGAAGAACCTTAGAAGACGAAAGGAGGAGAGAGCGCGACCGTAAAGCCGAGTTGGCACATACAAGAACACGCCGGATTTCCTCCGACGACAATGATGCTGGCTTGCCTCCTCTTATAGCATGTTTTGACCAACACAAAAGAATCATAACATTAAAGTGGGATAATTACAATATATATGTTGAATCATTTACATTTCATATTGTGAACAAGGTTTATATGATGCTACCTATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAGGAAATCCGGCGTGTTCTTGTATGTGCCAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCGTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGGCATGCACAGCAACAACTACGACGATAACGACGATAAGAGACGCCCGAGCAGAGATTAAAAAGGAAGATCTTGTGAAGATCGAAGGCGAGGAAGATCGATGGGAAATGGAGATGGCGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAATTTTCTCATTGGTTGCAACGGGGTCGGCCGTTTTCCAACGTCGACAGTACTTTTGCAGATCTCGACGACAACTTGGCGTGGGTGTTCGAGCATCAACTCGGCCACTGTGAACGGCTCGTTGAATTCTTGGATGGAACCGTCGGAGAGAACTACTTTTCCGACGCCAGAGACGGAGGTGATGTTGCCCATCGGAAAATGATCGGAAGTTGA

Coding sequence (CDS)

ATGTTTATCCTTGGCTTCCAACCTCTGCCGGATAATTGTCTGCTCAAATACTCCGGCCTCCCCTCCGCCGCCATCTCCATTTCCCATCGATCTTCCTCGCCTTCGATCTTCACAAGATCTTCCTTTTTAATCTCTGCTCGGGCGTCTCTTATCGTCGTTATCGTCGTAGTTGTTGCTGTGCATGCCCTTGCAAACCAAGGAAGAACCTTAGAAGACGAAAGGAGGAGAGAGCGCGACCGTAAAGCCGAGTTGGCACATACAAGAACACGCCGGATTTCCTCCGACGACAATGATGCTGGCTTGCCTCCTCTTATAGCATGTTTTGACCAACACAAAAGAATCATAACATTAAAGTGGGATAATTACAATATATATGTTGAATCATTTACATTTCATATTGTGAACAAGGTTTATATGATGCTACCTATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAGGAAATCCGGCGTGTTCTTGTATGTGCCAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCGTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGGCATGCACAGCAACAACTACGACGATAACGACGATAAGAGACGCCCGAGCAGAGATTAAAAAGGAAGATCTTGTGAAGATCGAAGGCGAGGAAGATCGATGGGAAATGGAGATGGCGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAATTTTCTCATTGGTTGCAACGGGGTCGGCCGTTTTCCAACGTCGACAGTACTTTTGCAGATCTCGACGACAACTTGGCGTGGGTGTTCGAGCATCAACTCGGCCACTGTGAACGGCTCGTTGAATTCTTGGATGGAACCGTCGGAGAGAACTACTTTTCCGACGCCAGAGACGGAGGTGATGTTGCCCATCGGAAAATGATCGGAAGTTGA

Protein sequence

MFILGFQPLPDNCLLKYSGLPSAAISISHRSSSPSIFTRSSFLISARASLIVVIVVVVAVHALANQGRTLEDERRRERDRKAELAHTRTRRISSDDNDAGLPPLIACFDQHKRIITLKWDNYNIYVESFTFHIVNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTTITTIRDARAEIKKEDLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLQRGRPFSNVDSTFADLDDNLAWVFEHQLGHCERLVEFLDGTVGENYFSDARDGGDVAHRKMIGS
Homology
[Close]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match: XP_038899617.1 (uncharacterized protein LOC120086875 [Benincasa hispida])

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-53
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0 

Query: 136 KVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTTIT 195
           KVYMMLPIRGGKPASLSSEEIRRVL+CANSALRSRSLLLSSSKVLPWFARA  AT+ TIT
Sbjct: 67  KVYMMLPIRGGKPASLSSEEIRRVLLCANSALRSRSLLLSSSKVLPWFARA--ATSATIT 126

Query: 196 TIRDARAEIKKEDLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEK 255
           T R+ + EIKKEDLVKIEGEEDRWE EMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEK
Sbjct: 127 TTREVQVEIKKEDLVKIEGEEDRWETEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEK 186

Query: 256 KFSHWL 262
           K+SHWL
Sbjct: 187 KYSHWL 190

[Close]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match: KAA0046688.1 (putative Multidrug resistance protein ABC transporter family protein [Cucumis melo var. makuwa] >TYK18224.1 putative Multidrug resistance protein ABC transporter family protein [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-50
Identity = 118/150 (78.67%), Postives = 126/150 (84.00%), Query Frame = 0 

Query: 114 IITLKWDNYNIYVESFTFHIVNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLL 173
           II  K DN +  V     +I+NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLL
Sbjct: 52  IILTKVDNSSFMVH---HNIINKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLL 111

Query: 174 LSSSKVLPWFARACTATTT-TITTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEY 233
           LSSSKVLPWFARACTATTT T TT R+ RAEIKKE D+VK+EGEE  WE    AEGRPEY
Sbjct: 112 LSSSKVLPWFARACTATTTVTTTTTREYRAEIKKELDVVKMEGEEVGWE---TAEGRPEY 171

Query: 234 LSRQLSGRGWKPSLDTIKEKKFEKKFSHWL 262
           LSRQLSGRGWKPSLDTIKEKK EKK SHWL
Sbjct: 172 LSRQLSGRGWKPSLDTIKEKKIEKKLSHWL 195

[Close]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match: XP_008451489.1 (PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-48
Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0 

Query: 135 NKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTT-T 194
           NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLLLSSSKVLPWFARACTATTT T
Sbjct: 67  NKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACTATTTVT 126

Query: 195 ITTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKK 254
            TT R+ RAEIKKE D+VK+EGEE  WE    AEGRPEYLSRQLSGRGWKPSLDTIKEKK
Sbjct: 127 TTTTREYRAEIKKELDVVKMEGEEVGWE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKK 186

Query: 255 FEKKFSHWL 262
            EKK SHWL
Sbjct: 187 IEKKLSHWL 192

[Close]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match: XP_004135994.1 (uncharacterized protein LOC101221516 [Cucumis sativus] >KGN45008.1 hypothetical protein Csa_016871 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 4.0e-48
Identity = 109/129 (84.50%), Postives = 115/129 (89.15%), Query Frame = 0 

Query: 135 NKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTTI 194
           NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLLLSSSKVLPWFARACTATTTT 
Sbjct: 67  NKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACTATTTTA 126

Query: 195 -TTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKK 254
            TT R+ RA+ KKE D+VK+EGEE  WE     EGRPEYLSRQLSGRGWKPSLDTIKEKK
Sbjct: 127 STTTREYRADTKKELDVVKMEGEEVEWE---TVEGRPEYLSRQLSGRGWKPSLDTIKEKK 186

Query: 255 FEKKFSHWL 262
           FEKK SHWL
Sbjct: 187 FEKKLSHWL 192

[Close]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match: XP_022152205.1 (uncharacterized protein LOC111019977 [Momordica charantia])

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-42
Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0 

Query: 134 VNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTT 193
           + KVY+MLPIRGGKPASLSSEEIRR+L+C NS LR  SL  SSSKVLPWFAR C  TTTT
Sbjct: 64  LKKVYVMLPIRGGKPASLSSEEIRRILLCTNSTLRLHSLFRSSSKVLPWFARVC--TTTT 123

Query: 194 ITTIRDARAEIKKEDLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKF 253
            TTI  A  ++KK D ++  GEE+RWE EMAAEGRPEYLSRQ SGRGWKPSLDTIKEKKF
Sbjct: 124 ATTIGTAGVKMKKGDNME-TGEENRWETEMAAEGRPEYLSRQFSGRGWKPSLDTIKEKKF 183

Query: 254 EKKFSHWL 262
           EKK SHWL
Sbjct: 184 EKKISHWL 188

[Close]
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match: A0A5D3D3I3 (Putative Multidrug resistance protein ABC transporter family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001630 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-50
Identity = 118/150 (78.67%), Postives = 126/150 (84.00%), Query Frame = 0 

Query: 114 IITLKWDNYNIYVESFTFHIVNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLL 173
           II  K DN +  V     +I+NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLL
Sbjct: 52  IILTKVDNSSFMVH---HNIINKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLL 111

Query: 174 LSSSKVLPWFARACTATTT-TITTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEY 233
           LSSSKVLPWFARACTATTT T TT R+ RAEIKKE D+VK+EGEE  WE    AEGRPEY
Sbjct: 112 LSSSKVLPWFARACTATTTVTTTTTREYRAEIKKELDVVKMEGEEVGWE---TAEGRPEY 171

Query: 234 LSRQLSGRGWKPSLDTIKEKKFEKKFSHWL 262
           LSRQLSGRGWKPSLDTIKEKK EKK SHWL
Sbjct: 172 LSRQLSGRGWKPSLDTIKEKKIEKKLSHWL 195

[Close]
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match: A0A1S3BSP6 (uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.6e-49
Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0 

Query: 135 NKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTT-T 194
           NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLLLSSSKVLPWFARACTATTT T
Sbjct: 67  NKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACTATTTVT 126

Query: 195 ITTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKK 254
            TT R+ RAEIKKE D+VK+EGEE  WE    AEGRPEYLSRQLSGRGWKPSLDTIKEKK
Sbjct: 127 TTTTREYRAEIKKELDVVKMEGEEVGWE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKK 186

Query: 255 FEKKFSHWL 262
            EKK SHWL
Sbjct: 187 IEKKLSHWL 192

[Close]
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match: A0A0A0K6C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-48
Identity = 109/129 (84.50%), Postives = 115/129 (89.15%), Query Frame = 0 

Query: 135 NKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTTI 194
           NKVYMMLPIRGGKPASLSSE+IRRVL+CANSALRSRSLLLSSSKVLPWFARACTATTTT 
Sbjct: 67  NKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACTATTTTA 126

Query: 195 -TTIRDARAEIKKE-DLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKK 254
            TT R+ RA+ KKE D+VK+EGEE  WE     EGRPEYLSRQLSGRGWKPSLDTIKEKK
Sbjct: 127 STTTREYRADTKKELDVVKMEGEEVEWE---TVEGRPEYLSRQLSGRGWKPSLDTIKEKK 186

Query: 255 FEKKFSHWL 262
           FEKK SHWL
Sbjct: 187 FEKKLSHWL 192

[Close]
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match: A0A6J1DD99 (uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019977 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.1e-43
Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0 

Query: 134 VNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTT 193
           + KVY+MLPIRGGKPASLSSEEIRR+L+C NS LR  SL  SSSKVLPWFAR C  TTTT
Sbjct: 64  LKKVYVMLPIRGGKPASLSSEEIRRILLCTNSTLRLHSLFRSSSKVLPWFARVC--TTTT 123

Query: 194 ITTIRDARAEIKKEDLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEKKF 253
            TTI  A  ++KK D ++  GEE+RWE EMAAEGRPEYLSRQ SGRGWKPSLDTIKEKKF
Sbjct: 124 ATTIGTAGVKMKKGDNME-TGEENRWETEMAAEGRPEYLSRQFSGRGWKPSLDTIKEKKF 183

Query: 254 EKKFSHWL 262
           EKK SHWL
Sbjct: 184 EKKISHWL 188

[Close]
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match: A0A6J1GN59 (uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC111455974 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42
Identity = 100/130 (76.92%), Postives = 108/130 (83.08%), Query Frame = 0 

Query: 134 VNKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACTATTTT 193
           + KVYMMLPIRGGKP SLSSEEIRRV++CANSALRSRSLLLSSSKVLPW ARA +ATT T
Sbjct: 65  LKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSATTPT 124

Query: 194 ITTIRDARAEIKKEDLVKIEGEEDRW--EMEMAAEGRPEYLSRQLSGRGWKPSLDTIKEK 253
            T       ++KK+DL  I GEE RW  EM MAAEGRPEYLSRQLSG+ WKPSLDTIKEK
Sbjct: 125 TTGA--VGVDVKKKDLTMI-GEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEK 184

Query: 254 KFEKKFSHWL 262
           KFEKK SHWL
Sbjct: 185 KFEKKLSHWL 191

[Close]
BLAST of CaUC09G162890.1 vs. TAIR 10
Match: AT4G02090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-14
Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = 0 

Query: 136 KVYMMLPIR--GGKPAS-----LSSEEIRRVLVCANSALRSRSLLLSSSKVLPWFARACT 195
           K+Y++LP +  GG+ A      L+SEE+R++L  A + +RS         +LPWF     
Sbjct: 82  KIYLVLPAKRSGGRAAKSSSAVLTSEEMRKMLFSATAMVRSSFSYYEG--ILPWF----- 141

Query: 196 ATTTTITTIRDARAEIKKEDLVKIEGEEDRWEMEMAAEGRPEYLSRQLSGRGWKPSLDTI 255
                  T R  +      D V       R E EM  E RPE+LSRQLSGRGWKPSLD I
Sbjct: 142 -------TTRSYKNNNPATDTVVAATSVGRLEAEMEEEDRPEFLSRQLSGRGWKPSLDPI 195

Query: 256 KEKKFEKK 257
           +EKK +KK
Sbjct: 202 REKKAKKK 195

The following BLAST results are available for this feature:
BLAST of CaUC09G162890.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899617.11.4e-5390.48uncharacterized protein LOC120086875 [Benincasa hispida][more]
KAA0046688.12.5e-5078.67putative Multidrug resistance protein ABC transporter family protein [Cucumis me... [more]
XP_008451489.11.4e-4886.05PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo][more]
XP_004135994.14.0e-4884.50uncharacterized protein LOC101221516 [Cucumis sativus] >KGN45008.1 hypothetical ... [more]
XP_022152205.11.5e-4275.78uncharacterized protein LOC111019977 [Momordica charantia][more]
BLAST of CaUC09G162890.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC09G162890.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D3I31.2e-5078.67Putative Multidrug resistance protein ABC transporter family protein OS=Cucumis ... [more]
A0A1S3BSP66.6e-4986.05uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=... [more]
A0A0A0K6C61.9e-4884.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1[more]
A0A6J1DD997.1e-4375.78uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1GN593.5e-4276.92uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC1114559... [more]
BLAST of CaUC09G162890.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G02090.12.3e-1441.41unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..89
NoneNo IPR availablePANTHERPTHR33052DUF4228 DOMAIN PROTEIN-RELATEDcoord: 135..256
NoneNo IPR availablePANTHERPTHR33052:SF101AGAA.5coord: 135..256

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC09G162890CaUC09G162890gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC09G162890.1-exonCaUC09G162890.1-exon-Ciama_Chr09:4743327..4743522exon
CaUC09G162890.1-exonCaUC09G162890.1-exon-Ciama_Chr09:4744075..4744518exon
CaUC09G162890.1-exonCaUC09G162890.1-exon-Ciama_Chr09:4744671..4744692exon
CaUC09G162890.1-exonCaUC09G162890.1-exon-Ciama_Chr09:4744934..4745240exon
CaUC09G162890.1-exonCaUC09G162890.1-exon-Ciama_Chr09:4745513..4745521exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC09G162890.1-cdsCaUC09G162890.1-cds-Ciama_Chr09:4743327..4743522CDS
CaUC09G162890.1-cdsCaUC09G162890.1-cds-Ciama_Chr09:4744075..4744518CDS
CaUC09G162890.1-cdsCaUC09G162890.1-cds-Ciama_Chr09:4744671..4744692CDS
CaUC09G162890.1-cdsCaUC09G162890.1-cds-Ciama_Chr09:4744934..4745240CDS
CaUC09G162890.1-cdsCaUC09G162890.1-cds-Ciama_Chr09:4745513..4745521CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC09G162890.1CaUC09G162890.1-proteinpolypeptide