CaUC08G150680.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G150680.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr08: 22241791 .. 22243927 (+)
Sequence length240
RNA-Seq ExpressionCaUC08G150680.1
SyntenyCaUC08G150680.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGCAAAGAGAAAGGAAGCTGCACTGTTGATCTCAATTTTATGTTCAAGTCGATGTGATATTTAAAAAAGATTTAAAAAGAAAAAATTGAAAACATATATCTAAATAAGTAAACAGTTTACTCATCTTAAATGAGTTAAAATACTTGTTATAATATTATAGTCACATTAGGTTACATTTTGTTGCCCTTATTTATTTATTTAATTATTTAAATATTTTATCTATTTTATATAGTATATCGGAAATGTCTATGGAAATTTTATACTTTGAGTACAATGCATTTAGAGTATCTGAACTAAAACAAAATTAGCAACTAAAATAAATTCATTTAACAAGAACCGATAGTTTGAAGTACTAATTTTTCTGTTCATTTCTCAATAAGTAACGTTATGATCTCTGTATAAGGATGCTCTGGCAGATGGCATTCTGACATTTTGTTCCTTAATTCTGACAGGGAATAAAACGTGGGCATCATTTGTGCACATTTTCTATGGAATTCAAACTACTCTGCTAACAAATTTTGTAGAAACATGGAACCTGGGAAAGTATGTACTTTCTTTAACTCTCTTTTAAGCTGTAGTCTTGCTCAAGTGCCCTTAGGTCTGATGAATCCTAATAAGAGAATTAAACATTCAAACTAGAATGTGACATAGATATGAAAATGGAAATCTTCTTAAAATTTAGAATACTTACATAACTGAAATTAATTTGTACCTTTTCTTGTAGAATGGTATTGTTTTGTGCTTATTCTTGTTGAATTATTGTCTTTGGACCCTGGCAAAATATATGTTTGACATCAAGGAGTGTTTTAAATTTAGTCCATATTTAAGGAGTTGGTTGAATTATATGTTTAGTCCTTGAACTTCCATCTATTACGTCCTTAACTTTTGATTTTGTGTTAAATAGGTCTTTGAAATTTCAGTTTTGTACTTTTTATAGAACCGTGACATGCATTTTTTTTTTTTTTTAAAAAAGCCATTACCATATCTACTTAACTTAAAATTTCAATTCTATACTTTTTAGCAGTTTGGAATGTTTTACATATCTATTAGACAAAGTTGATAGTTTGAGAACCTATTGGACATTTTCAGAGTTGGACGTATTAGTAACAAAATTGAAAGTTTATGGATCTATTAAAGTGTTTGTGGATAAACATAAAAAGTAATAATTCATTTCCTTATGTTTTTACAACATATTTAATTCGTTAGTGAATATTGAAGTTATCTGAAGTGAAGTCAAAATTTTCTCTCTAGGATGGGGTTTTTATTTCTTCAAAATTTCTATTTGCTCACTAGGTATCTTGATTTCGTTATGTATTATGGAAGTTGTGACTCAAAGTTAACATTCTATTATGAGGGTATAATTTTAAAAAAAAATGTAAGTTGACATAAATTTAAAAGAGTAATTAGACATCCAAGAGAATAAAAGCAAGATTTCTTCTCATCTTTCGTAAATCTAAAGGAGGAACTTGATGCTTCCCTCTCGTACCTTGGTTTCATTTCTTCTCAAAATTTCAAGCGACTCACCAAATATAATTAAAAAAATGTTTAAAAGGTAAGGGACTCGACTTTTATAAACTTTGAGGTCTAAATTGAATAAATGCATAAATGTTGGTGACCAAATCAGATGTTTTAGGTTAAAATATTATATTTTGGTCCACATTACGTCTAACTGTATGTCAATTTAGGGTTAGGGTTGTTTCTAAAAGGTTTAAGAATTAACAGTAAAAGGGTCGTTTAATTTTGGGCAAAGTTGGTTGGTTCAGGAGATTTAAGACACTTTTAGTCTTTAAGGTTTAAAAAAATGTTTTAAAGAGTCAAAGCATTTAGAAAAATATTTTAACTAGTCTCTGACATTCTTTGACCATTAGTTGATTGTAAAAAATATGACGTGGAAGTAACGGAATGACTAGATTCAATTGATGTGGTAAACTTAACTTCAATGATTCGACTAAAAAAATCACTTTTTTGTTTTAATGAATTTGGTTAAAATAAGAACCAGTTATCTATCAGAACCGATCACAAGCCACCTGAGAGTCCCATTTCTTAAAGGCTATGATTAAATCAGGGAAAGGGTCGGAAGCGAATTTGGCTAAAGAGAGAATCAGATTTTCGGTGGCCAGTACGACATAA

mRNA sequence

ATGTTGATGCAAAGAGAAAGGAAGCTGCACTGGAATAAAACGTGGGCATCATTTGTGCACATTTTCTATGGAATTCAAACTACTCTGCTAACAAATTTTGTAGAAACATGGAACCTGGGAAAGTCTTTGAAATTTCAGTTTTGTACTTTTTATAGAACCGCTATGATTAAATCAGGGAAAGGGTCGGAAGCGAATTTGGCTAAAGAGAGAATCAGATTTTCGGTGGCCAGTACGACATAA

Coding sequence (CDS)

ATGTTGATGCAAAGAGAAAGGAAGCTGCACTGGAATAAAACGTGGGCATCATTTGTGCACATTTTCTATGGAATTCAAACTACTCTGCTAACAAATTTTGTAGAAACATGGAACCTGGGAAAGTCTTTGAAATTTCAGTTTTGTACTTTTTATAGAACCGCTATGATTAAATCAGGGAAAGGGTCGGAAGCGAATTTGGCTAAAGAGAGAATCAGATTTTCGGTGGCCAGTACGACATAA

Protein sequence

MLMQRERKLHWNKTWASFVHIFYGIQTTLLTNFVETWNLGKSLKFQFCTFYRTAMIKSGKGSEANLAKERIRFSVASTT
Homology
The following BLAST results are available for this feature:
BLAST of CaUC08G150680.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC08G150680.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC08G150680.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC08G150680.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC08G150680CaUC08G150680gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC08G150680.1-exonCaUC08G150680.1-exon-Ciama_Chr08:22241791..22241821exon
CaUC08G150680.1-exonCaUC08G150680.1-exon-Ciama_Chr08:22242250..22242340exon
CaUC08G150680.1-exonCaUC08G150680.1-exon-Ciama_Chr08:22242702..22242738exon
CaUC08G150680.1-exonCaUC08G150680.1-exon-Ciama_Chr08:22243847..22243927exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC08G150680.1-cdsCaUC08G150680.1-cds-Ciama_Chr08:22241791..22241821CDS
CaUC08G150680.1-cdsCaUC08G150680.1-cds-Ciama_Chr08:22242250..22242340CDS
CaUC08G150680.1-cdsCaUC08G150680.1-cds-Ciama_Chr08:22242702..22242738CDS
CaUC08G150680.1-cdsCaUC08G150680.1-cds-Ciama_Chr08:22243847..22243927CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC08G150680.1CaUC08G150680.1-proteinpolypeptide