CaUC08G141580.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G141580.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LysM domain-containing protein
Location	Ciama_Chr08: 1293220 .. 1297809 (+)
Sequence length	921
RNA-Seq Expression	CaUC08G141580.1
Synteny	CaUC08G141580.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTCTAATTCTCAGGTATTTCGCTATTCCCTTAAAATCTCTTAACCCATTACTCATACCATACCCTTTCTTTTTGTTTGAAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGGTATGTTTGCTCTCCATTGAAACCTGGGTTCACTTCTGTACCTTTTCTGCTCTGTTTGATTTCAGAAAAGAAAACTTTGGAGAAGATCTTCCACCGAAATCTCAACTCTATCGTGCTCTTGGTTCTAATTAGTTCATCCCCATGTTTGAATTGTTAGCTAAATTCTGCCTCTGTGTTCCTTTGTTTTATCACTGACCCAGATATTGATTAGTGATTTATGGTTTGAATTTCTTTTGAATCCACTTTTAGAAGATGTTTTGGGATTATAAAGAATGAGTTAGTGATTAATTGTTAAGTATTTTTCTTATAAGTTCTGTGTTGACTTTGGCAGAGATGGAGGTTTCAACTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGTAAGAGGAAATAGTAATATTATTCCCTCTGCTTTACTTCTTATAAGAATTTGATGGTATCTGAAATGTGTATTTTCCAGCCTCAATGACTTAGGTTTTCTGGAGTGAAAAAGGGGTTTTGTGGGCTTACTAGCTTTAAAAGTGCCTCTCTTCTGTTAGAACATAAAGTGTAGGTTTGTGAGTGATATTGAAATTGTTAAAATTACTTCATAATACGCCTTTAACCACTCAAAATCAATTTACCGTTTAATTTTGCACTTTTATATGCAATTTTCGTACCATCAAAATTGTTATAGATTAGAGTTGTTTCTAGTTCCACAGCGAGTTATCAACTGAAGTTGTTGCTAGTAATTGGATTCTGCACTCCTGTTGTCAATATAATGATATGCTGTTCAATATATTAAATTATTCTGAGAAATTTTCCTTATTCAAAGTTTCAAATCAATCATATGGGCAATCGCACAGTTAAAATGAGTTAGTACTTCAGGAAATTCAGTTGAATTTCTGAATTATTACAGTTTCATCTGAGTGTTAAGATGTCAATTGGTAGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGGTAAGCAACCTTGTACTTCCTTCCCACTTTCAAGTGATGTTCTAAACTCTTCTGCAGGATAATTTTGTAACTTTCATTTCTGTGGTTTCTACTTCTAGCTTCTTGTTGAATTACTTCAGAAAGAAATTGATAGCTCAAAACTTCTGATACCAATCATTTCCTAAGCAATTGATTATGTTTTGATTCTAAACTTTGATTGCATCGTTGGTTATGTATTATAAATGATGATTACTTTTCGAATATAATTTTTCTTTGCAATCTATTTATTAATAATGGCTGCTGTAGGAAAAATTGTAAGATAGCTGCAAACTAATTACTGAATGTTAGATCTTCCCAACAAAATTGATGTAAAGAAGCAAATCCTATGTGGTCATTAGCACATGACCACAAAGCCTGTAGTTGAAATCCCATACGAGCGTACTAATGACTACAAGGCTTGTGGTTCAGATTAAAAGAAGTACAGGCTTGCTTATTGCATGGTTGGTTATGTGTTACAAATGATGATTACTTTTGGAATATAATTTTTCTTTGCAACCTATCACAATCGATTTAAAATCAGATTTTCACGAGCTGGGTTCATAGTTTCTAAACTTTGTGATCTTTGAAGAATTGACAAAATCACTTGAACCATACTAAACTGCAATTTGTGCTCGTCACAATTGGATGTAAAGAAAGAAATCACAATCATGAGAGTTTTAGAACCATCATGTTTGATTGTGATACTGCACCAGGTTGTGAGACTAGCTAGCGTTTGAAATATTGCTGGCTTTGGTCAATCACTTGGCAATATTTCCATGTGAAGCTAGGGGAGGAGAGGTAATCCCGGCAGGCATATGAAAAAATGCCTAATAAATATCCATTTTGTTAGACCAAGTTTAGACATGATTACAAATTTGTGCTTAAGTAACCTCCTAAAATACTTCTCCTAAAATACTTCTAGCACCATCTTCAACTTGGTTAAAGCTTTATTGTAGGGGCCAAAGTTGATACTGCACCAAGTTGTGAGACTAGCTAGCATTTGCAATATTGCTGGTTTTAGTCAATCACTTGACTATATTTCCTTGTCAAGCTAGGGGAGGAGAGGTAATCCTTGCAGGCATATGAAAAAATGCCTAATAAATATCCAATTTGTTAGACTAAGTTTGGACATGATTACAAATTTGTGCTCAAGGACCCTCCTAAAATACTTCCACCACCATCTTCAACTTGGTTAAAGTTTTATTGTAGGGGCAAAGCAAGCATAACTCAATTGGTATACAAGTGTGCTTATGGCCACGAGGTCTGTGGTTCAAATTCTCCTTCTCCCAATTGTAGTAAAAAAACAAGCCTTTTTGTAGGGGGGACTGTCCAGGTTCTGTCCAGGTTCTAGTTTGTAGATTTTGAGTGATTTAGAGTGAGTTGTTGAAGAGAAAACTCTAGTTGAATTTGAGCTCGGTATCCATGTGATTTGTTATGTACTTGAGCTACACATTAGAGGATTTTTTGCATATCCATGTATGGTCACATATATGATTCGCCATCTATCTGGCAGGAATGTGTCCGGAGTAGTTGAGGACATTGTCGTCAATTCAAGATTGAATTACTCTATAATCTATTCTTGTTCGTGGCTTCTTTCTTATATAATCACTGCAGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAGCCTCCTCTCGTCTACCTCCTGTAAGTTTTTCTCACCAGAAGTAATTATATTCTTTCATTTAGAGCTTGTCTAGCCTAAACATGTCATCCCTACGTACTTATTTGGATACTTCTTTGACATTTATCTAGAAGTGACAATTCAACGAACTTATTTGTTCTCTTTTCACTTTTTTCTCTCTGTCAGGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTGTAAGTAATGTAACTTTATGCTCCTACTTTTACCTAATTCACCTTTACATGATTTTGTTTTTCTTTAGAGTGTTTTCTTGAGCATGGTGTTATTAGATTTCTTTAACTGGGGCAGAGGTAATACTTGCAATGAGAAATGGGAGCAAAATTGACTACTACTAAAGTTGTTGAATTGTAGCTTTCATTTCTTTGAGCACCCAACTCACCAAGCCTTTTCCAACTAATCATTCATTTTTGTCTATTCCTAATGGAGTTCTCTGGCCATCCACTTCCCTTTCTTCTGGTTGGCCTCATCTTTTTGTTTCAACAAGATGATAATACTGCCAAAATGGTAAACTATCTTCAGATAACAACATTGGATTTCCACATGGGTGTGATAGGAACCCGCATATGTTGAATTATAATTGATAAAGAAAATTCAAGATAAACTAAGTGATCAAGACCTTCCCAATTTCAAGTCCTAATTCACTCGCCAAAATATTGCTTATCTTCCTCCTTCCCTATTGAAGGTATTTATAGCCAACCAATTCAATATACAATATCTGAATAGATACTTAAGCATCTTGGAGAACCACACCCCAAAAGCTAGCTAATAAGGTGGGAGAGCCAAATCACTTAAGTACTATATTGGTTCCTAACATATCCCTCTAATACTATTCCTATCAGGGTGGTTTTGGTACAAAGCAAAAATATGTTAAGCTTCGTTTCTAAACAATACCCTTAAAATTATTCTAAACTCAGCTGAACATGTTTCATATAAGAAAACGTGGCTATGTAATCTTGCTGTGTTCCAGGTTAGTAGAGGGAGGGAGAGAGCTGCACGTATTAGCTTGATTCAAGCTTTGGGAGTCTTCATTTGTCTTCTAGTTTCCATTCTAGCCAAAAGTTCGCAATTTGGTAATAGTTTATAGTTATTGTTTTGCAGAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

mRNA sequence

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTCTAATTCTCAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGAGATGGAGGTTTCAACTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

Coding sequence (CDS)

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTCTAATTCTCAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGAGATGGAGGTTTCAACTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

Protein sequence

MAMANFNGFCDGSEAQPEKQSTPFFSPPQVASTPNAPFSNSQKLTQLALLLCFFPSNFYPRDWATTTFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALASSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWRGGTRRDLNRNE

Homology

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BLAST of CaUC08G141580.1 vs. NCBI nr
Match: XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-112
Identity = 212/248 (85.48%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 55  PSNFYPRDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISD 114
           PS  + R+WA T  + KNQ RA+TLRWRFQLQDISK+QLS KHH VHIVEGSESLT   +
Sbjct: 27  PSLTHHRNWANTRKSLKNQFRAITLRWRFQLQDISKNQLSTKHHLVHIVEGSESLTLNPN 86

Query: 115 QNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLS 174
           QNGDP HSI +ANK+I DTDLEQKGQNIKIQNPRAI DVYQLEEKLQSALN LRNYKKL 
Sbjct: 87  QNGDPTHSISVANKRIKDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNELRNYKKLF 146

Query: 175 ALASSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGH 234
           ALASS LPPARTTSFIVLVPLIVFCARCIIGASYARVF TSRLETVDKREG+ HKFRSGH
Sbjct: 147 ALASSHLPPARTTSFIVLVPLIVFCARCIIGASYARVFGTSRLETVDKREGKHHKFRSGH 206

Query: 235 WRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWG 294
           WRSALRDIRELDGLDCESPIDS SPSEDEQIS EDLSH YKKLDQDY+KFLSECGLSKWG
Sbjct: 207 WRSALRDIRELDGLDCESPIDSMSPSEDEQISDEDLSHDYKKLDQDYEKFLSECGLSKWG 266

Query: 295 YWRGGTRR 301
           YWRGGT+R
Sbjct: 267 YWRGGTQR 274

[Close]

BLAST of CaUC08G141580.1 vs. NCBI nr
Match: KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-105
Identity = 195/245 (79.59%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALA 180
           +SIVI NKKI+DTDLEQKGQNIKIQN RA++   D +QLEEKLQSALNGL+ YKKL ALA
Sbjct: 90  NSIVIDNKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEEKLQSALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFRSGHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPS DEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of CaUC08G141580.1 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-105
Identity = 194/245 (79.18%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALA 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL ALA
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFRSGHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of CaUC08G141580.1 vs. NCBI nr
Match: XP_011656102.1 (uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hypothetical protein Csa_009213 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-103
Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG+ESLTS S+QNGDP 
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGNESLTSTSNQNGDPP 90

Query: 122 HSIVIANKKIMDTDLEQKGQNIKIQNP---RAITDVYQLEEKLQSALNGLRNYKKLSALA 181
           HSIV+ANKKIMDTDLEQK QNIKIQNP   R I + +QLEEKLQSALNGLR YKKL ALA
Sbjct: 91  HSIVMANKKIMDTDLEQKRQNIKIQNPREVRKIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFRSGHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of CaUC08G141580.1 vs. NCBI nr
Match: XP_011656104.1 (uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-103
Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEG---SESLTSISDQNG 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG   +ESLTS S+QNG
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGYGRNESLTSTSNQNG 90

Query: 122 DPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALA 181
           DP HSIV+ANKKIMDTDLEQK QNIKIQNPR I + +QLEEKLQSALNGLR YKKL ALA
Sbjct: 91  DPPHSIVMANKKIMDTDLEQKRQNIKIQNPREIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFRSGHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.5e-106
Identity = 195/245 (79.59%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALA 180
           +SIVI NKKI+DTDLEQKGQNIKIQN RA++   D +QLEEKLQSALNGL+ YKKL ALA
Sbjct: 90  NSIVIDNKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEEKLQSALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFRSGHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPS DEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.5e-106
Identity = 194/245 (79.18%), Postives = 222/245 (90.61%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALA 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL ALA
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFRSGHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL
Match: A0A0A0KSX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 5.2e-104
Identity = 196/245 (80.00%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG+ESLTS S+QNGDP 
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGNESLTSTSNQNGDPP 90

Query: 122 HSIVIANKKIMDTDLEQKGQNIKIQNP---RAITDVYQLEEKLQSALNGLRNYKKLSALA 181
           HSIV+ANKKIMDTDLEQK QNIKIQNP   R I + +QLEEKLQSALNGLR YKKL ALA
Sbjct: 91  HSIVMANKKIMDTDLEQKRQNIKIQNPREVRKIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFRSGHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL
Match: A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 8.8e-104
Identity = 194/253 (76.68%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALA 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL ALA
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPP--------ARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHK 240
           SSRLPP        ARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHK
Sbjct: 150 SSRLPPVNFFFSPEARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHK 209

Query: 241 FRSGHWRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECG 300
           FRSGHWRSALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECG
Sbjct: 210 FRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECG 269

[Close]

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL
Match: A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 6.6e-91
Identity = 186/270 (68.89%), Postives = 205/270 (75.93%), Query Frame = 0


Query: 39  SNSQKLTQLALLLCFFPSNFYP----RDW--ATTTFKNQVRAVTLRWRFQLQDISKDQLS 98
           S   +  + +LL    P    P    R W  A  + KNQ  AV LRWRFQLQDI +DQ  
Sbjct: 6   SQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALRWRFQLQDIPRDQSF 65

Query: 99  AKHHYVHIVEGSESLTSISDQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVY 158
            KHH+V IVEG E+ TSI  QNG   HSIVI N+KI DTDLE KGQ+ KI+NP AI DVY
Sbjct: 66  TKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNPLAIRDVY 125

Query: 159 QLEEKLQSALNGLRNYKKLSALASSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFET 218
           QL+EKLQS+LNGL+NYKKL    S RLPPARTTSFIVLVPLIVFCARCIIGASYARV +T
Sbjct: 126 QLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGASYARVSKT 185

Query: 219 SRLETVDKREGERHKFRSGHWRSALRDIRELDGLDCESPID---STSPSEDEQISVEDLS 278
           S+L+T+DK EGE HKFRSGHWRSALRDIRELDGLD ES  D   S SPS DEQISVEDLS
Sbjct: 186 SKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQISVEDLS 245

Query: 279 HAYKKLDQDYQKFLSECGLSKWGYWRGGTR 300
           HAYKKLD+DY+KFLSECGLS  GYWRG  R
Sbjct: 246 HAYKKLDKDYEKFLSECGLSNCGYWRGVPR 275

[Close]

BLAST of CaUC08G141580.1 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 58/230 (25.22%), Postives = 104/230 (45.22%), Query Frame = 0


Query: 78  RWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNG----DPAHSIVIANKKIMDTDL 137
           R RF +Q +S+++   KH      + SESL  I  Q G    +P  S    + ++ D D 
Sbjct: 35  RCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSSRLDDLDC 94

Query: 138 EQKGQNI---------KIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALASSRLPPART 197
           E+K   +         K+     + D+ ++E+  ++    +     LS      LP   T
Sbjct: 95  EEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQILPHLNT 154

Query: 198 TSFIV-LVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRSALRDIRE- 257
              +  L+P++ FC  CIIG  +           + ++  + H   S  WR+AL D  E 
Sbjct: 155 GVLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEP 214

Query: 258 --LDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSK 291
              DG D  SP    + +  E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 215 LASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

[Close]

BLAST of CaUC08G141580.1 vs. TAIR 10
Match: AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-09
Identity = 57/227 (25.11%), Postives = 102/227 (44.93%), Query Frame = 0


Query: 78  RWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNG----DPAHSIVIANKKIMDTDL 137
           +W F +Q +S+++   KH      + SESL  I  Q G    +P  S    + ++ D D 
Sbjct: 4   KW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSSRLDDLDC 63

Query: 138 EQKGQNI---------KIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALASSRLPPART 197
           E+K   +         K+     + D+ ++E+  ++    +     LS      LP   T
Sbjct: 64  EEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQILPHLNT 123

Query: 198 TSFIV-LVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRSGHWRSALRDIREL 257
              +  L+P++ FC  CIIG  +           + ++  + H   S  WR+AL D  E 
Sbjct: 124 GVLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEP 183

Query: 258 DGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSK 291
              D     DS SP   E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 184 LASDGH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211

The following BLAST results are available for this feature:

BLAST of CaUC08G141580.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890844.1	1.3e-112	85.48	uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida]	[more]
KAA0039254.1	1.1e-105	79.59	uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00...	[more]
XP_008459633.1	1.1e-105	79.18	PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]	[more]
XP_011656102.1	1.1e-103	80.00	uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hy...	[more]
XP_011656104.1	1.1e-103	80.00	uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus]	[more]

BLAST of CaUC08G141580.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC08G141580.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6Z4	5.5e-106	79.59	LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CBV5	5.5e-106	79.18	uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KSX5	5.2e-104	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1	[more]
A0A1S3CB50	8.8e-104	76.68	uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CKQ6	6.6e-91	68.89	uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CaUC08G141580.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09970.1	1.5e-10	25.22	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP...	[more]
AT4G09970.2	3.6e-09	25.11	unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 265..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..37
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 97..142 score: 9.426481

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC08G141580	CaUC08G141580	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1293220..1293345	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1293414..1293518	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1293850..1293926	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1294477..1294609	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1296242..1296343	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1296507..1296728	exon
CaUC08G141580.1-exon	CaUC08G141580.1-exon-Ciama_Chr08:1297654..1297809	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1293220..1293345	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1293414..1293518	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1293850..1293926	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1294477..1294609	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1296242..1296343	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1296507..1296728	CDS
CaUC08G141580.1-cds	CaUC08G141580.1-cds-Ciama_Chr08:1297654..1297809	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC08G141580.1	CaUC08G141580.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane