CaUC07G132520.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G132520.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 20549301 .. 20549689 (-)
Sequence length376
RNA-Seq ExpressionCaUC07G132520.1
SyntenyCaUC07G132520.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAAGAAAGAGAAATAGCAATGGCGGCAAACCCTAGAGAGCCAGTGGAGACTGTAAGAGGAATAGACGAAGTGCAAGCAATTATTGGGGAAAAGTCTCTGGTAAAAGGAGCCTGGATAGGCTCCAATGAAAATCCCTGGTGGATTTTCATTTTGTCCTTCGTTTTCAAGCTCTCTGCAGAAATCAGGGAGGGCTTTGAAGATAGAGTTGAAATCATTGGTCGGAAGGTCGTTCAAATAGACTCGGAACTCCGGTGACGGCTGGAGATGGCTGGAGCTAAGCGCTTGGACGGCTTGGATTATTTCTTTGATGATCGATAAGGAATTTGGGCCAGAGGAGCAACCCAGATCGGCAATTCCGAAGCTGGCCGGAGCACCGGTGGAAAGG

mRNA sequence

GGAAAAAGAAAGAGAAATAGCAATGGCGGCAAACCCTAGAGAGCCAGTGGAGACTGTAAGAGGAATAGACGAAGTGCAAGCAATTATTGGGGAAAAGTCTCTGGTAAAAGGAGCCTGGATAGGCTCCAATGAAAATCCCTGGTGGATTTTCATTTTGTCCTTCGTTTTCAAGCTCTCTGCAGAAATCAGGGAGGGCTTTGAAGATAGAGTTGAAATCATTGGTCGGAAGACTCGGAACTCCGGTGACGGCTGGAGATGGCTGGAGCTAAGCGCTTGGACGGCTTGGATTATTTCTTTGATGATCGATAAGGAATTTGGGCCAGAGGAGCAACCCAGATCGGCAATTCCGAAGCTGGCCGGAGCACCGGTGGAAAGG

Coding sequence (CDS)

ATGGCGGCAAACCCTAGAGAGCCAGTGGAGACTGTAAGAGGAATAGACGAAGTGCAAGCAATTATTGGGGAAAAGTCTCTGGTAAAAGGAGCCTGGATAGGCTCCAATGAAAATCCCTGGTGGATTTTCATTTTGTCCTTCGTTTTCAAGCTCTCTGCAGAAATCAGGGAGGGCTTTGAAGATAGAGTTGAAATCATTGGTCGGAAGACTCGGAACTCCGGTGACGGCTGGAGATGGCTGGAGCTAAGCGCTTGGACGGCTTGGATTATTTCTTTGATGATCGATAAGGAATTTGGGCCAGAGGAGCAACCCAGATCGGCAATTCCGAAGCTGGCCGGAGCACCGGTGGAAAGG

Protein sequence

MAANPREPVETVRGIDEVQAIIGEKSLVKGAWIGSNENPWWIFILSFVFKLSAEIREGFEDRVEIIGRKTRNSGDGWRWLELSAWTAWIISLMIDKEFGPEEQPRSAIPKLAGAPVER
Homology
The following BLAST results are available for this feature:
BLAST of CaUC07G132520.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC07G132520.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC07G132520.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC07G132520.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC07G132520CaUC07G132520gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC07G132520.1-exonCaUC07G132520.1-exon-Ciama_Chr07:20549301..20549447exon
CaUC07G132520.1-exonCaUC07G132520.1-exon-Ciama_Chr07:20549461..20549689exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC07G132520.1-cdsCaUC07G132520.1-cds-Ciama_Chr07:20549301..20549447CDS
CaUC07G132520.1-cdsCaUC07G132520.1-cds-Ciama_Chr07:20549461..20549667CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC07G132520.1-five_prime_utrCaUC07G132520.1-five_prime_utr-Ciama_Chr07:20549668..20549689five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC07G132520.1CaUC07G132520.1-proteinpolypeptide