CaUC06G119310.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G119310.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr06: 24166059 .. 24166708 (+)
Sequence length324
RNA-Seq ExpressionCaUC06G119310.1
SyntenyCaUC06G119310.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCACAAACCCATAAAGTTTCCTCCTTTTTCCCTTTTCGTGAAGACGACTCTGTTTCGACTCTGCTTCTTCAAATGTGGGTCGCGGCGGAGCTGACGACGGCGTCAGCGGCGGAGGATGGAAGGTTTGAGTTTCGTGGTTGCTTACAAAACGGGTATGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTAATGGTGTTTTGTGAAGGTAGGAAGATCAGATTCAGATTCAGATTCAGATCAGATCATTTGCGGTGGTGATATTGGCGGAGACGGCTCAATCTCTGGTTTTTTAATTTATGATATCAATTTTATTCTCTTCGAAATACATTTTGAATTAATTTATCATTTTCTGTAAAAAATTTCCCAAGAAATATGATTCAATGGCTAATTTGGGATTTTTCTTGTTAATTAGAGATAGGTTTTTTTTTTTCTTTTTTTCTTTTTTTTTGGGTTTCTTGTGGATTATGAGAAGCCTCAAAATCCCTTTGAATTAGTGAATGGCATTAAATTAGGCAGCCATTTCAATGTGTTGTCTTCTCTTACTGTTATATTACCATTTCAAAAGAAAGAAAATGTCAGAATTTTGCCTTCTCTCTCTGTCTCTGTCTGCTCCATAGATTAA

mRNA sequence

ATGAACTCACAAACCCATAAAGTTTCCTCCTTTTTCCCTTTTCGTGAAGACGACTCTGTTTCGACTCTGCTTCTTCAAATGTGGGTCGCGGCGGAGCTGACGACGGCGTCAGCGGCGGAGGATGGAAGGTTTGAGTTTCGTGGTTGCTTACAAAACGGGTATGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGCCATTTCAATGTGTTGTCTTCTCTTACTGTTATATTACCATTTCAAAAGAAAGAAAATGTCAGAATTTTGCCTTCTCTCTCTGTCTCTGTCTGCTCCATAGATTAA

Coding sequence (CDS)

ATGAACTCACAAACCCATAAAGTTTCCTCCTTTTTCCCTTTTCGTGAAGACGACTCTGTTTCGACTCTGCTTCTTCAAATGTGGGTCGCGGCGGAGCTGACGACGGCGTCAGCGGCGGAGGATGGAAGGTTTGAGTTTCGTGGTTGCTTACAAAACGGGTATGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCAGCCATTTCAATGTGTTGTCTTCTCTTACTGTTATATTACCATTTCAAAAGAAAGAAAATGTCAGAATTTTGCCTTCTCTCTCTGTCTCTGTCTGCTCCATAGATTAA

Protein sequence

MNSQTHKVSSFFPFREDDSVSTLLLQMWVAAELTTASAAEDGRFEFRGCLQNGYEEEEEEGGGGGGGGGGGGSHFNVLSSLTVILPFQKKENVRILPSLSVSVCSID
Homology
The following BLAST results are available for this feature:
BLAST of CaUC06G119310.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G119310.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G119310.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC06G119310.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC06G119310CaUC06G119310gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC06G119310.1-exonCaUC06G119310.1-exon-Ciama_Chr06:24166059..24166272exon
CaUC06G119310.1-exonCaUC06G119310.1-exon-Ciama_Chr06:24166599..24166708exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC06G119310.1-cdsCaUC06G119310.1-cds-Ciama_Chr06:24166059..24166272CDS
CaUC06G119310.1-cdsCaUC06G119310.1-cds-Ciama_Chr06:24166599..24166708CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC06G119310.1CaUC06G119310.1-proteinpolypeptide