CaUC06G106680.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G106680.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr06: 36159 .. 37979 (-)
Sequence length1645
RNA-Seq ExpressionCaUC06G106680.1
SyntenyCaUC06G106680.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACTCTCTCCCCCAGGAATTCCACTGCACAGGATCGGCTGAACAGTTTCCGTCTATGCAAAATAGAGGAGGCGATATGCTTAGCCAAATTCAATCCGAGATAACTTCTTCAAGCGCCGAAGTTGATTTTGAGGTGGGACAGAAAATCCCACTAAGATGGTAAATTCCGAAGCTTTCAACCTTCCATCTGCACATTAGATGTTTGTTAAAATGTCGTGCCTGAAATTCGTCAAGATTCTCTTGTTTTCGCCGCAATTCGATTAGATTTTGGTCACTTGGTTCAAACATAAGCATGTTCTTGATTTATACACCAATTAAATAGGTATGACTGTTAGGTGGCCAAGGCTTTTAACGCCTACATATTTATCTCAGATTATTAGGAAGCAGAATAATCCCTTAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCGGTGTACGCCGCGATGATTGATATACTCGGAAATTCGGGGAGGATTTCTGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTCTTGGGAGATTTAACTGTACCGATAGAACACAAACTTTTAATACCCTTTTGGAAATCCTGTTGAATCAATCTCAGCTTGATGCTGCCTGTCAGCTTTTTCAGCAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCTGTCCTTGAATTTGCTGATGCAATCTCTCTGCCAGAGAGGCCAGTCTGAACTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTTTAATGAAAGGATTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGCGGATTTCTCAAAGGGGTGGTGGAGGGGACATAGTAATTTACAGAACCCTGCTGTTTGCTTTGTGTGATAATGGAGAGATAGAGCAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACCGGATTGACTTAGATCAATGCAGGAATAGCAAGCTCACTATTGGGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAATGAGATTGATCAGGGAGATAAAGTGGTTAGCCACATGGTAGCTAAAGGCTTCAGGCCACCGCCGTCAATCTATGAAGCAAAAGCGGCTGCATTATGCAAAGAAGGCAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAATAGTGAAGGGAAGTGGTGTTCCAACTGTTGCATTGTACAACATAGTTCTGAAGGGTCTGTGTGATGAGGGCAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCAAACAAAGGAACTTACAGCACTTTAGTACATGGACTTTGTCGTGAAAATCGATACGTTGAAGCATGCAAGGTTTTAGAGGAGATGGTTATCAAATCGTTTTCGCCTTGTTCTAACACATTCAATACACTAATTAGAGGCCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTCTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCAACCTGACTGGCACCGCTATATGGTCCAAGGTTTTATGA

mRNA sequence

GCACTCTCTCCCCCAGGAATTCCACTGCACAGGATCGGCTGAACAGTTTCCGTCTATGCAAAATAGAGGAGGCGATATGCTTAGCCAAATTCAATCCGAGATAACTTCTTCAAGCGCCGAAGTTGATTTTGAGGTGGGACAGAAAATCCCACTAAGATGGTGGCCAAGGCTTTTAACGCCTACATATTTATCTCAGATTATTAGGAAGCAGAATAATCCCTTAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCGGTGTACGCCGCGATGATTGATATACTCGGAAATTCGGGGAGGATTTCTGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTCTTGGGAGATTTAACTGTACCGATAGAACACAAACTTTTAATACCCTTTTGGAAATCCTGTTGAATCAATCTCAGCTTGATGCTGCCTGTCAGCTTTTTCAGCAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCTGTCCTTGAATTTGCTGATGCAATCTCTCTGCCAGAGAGGCCAGTCTGAACTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTTTAATGAAAGGATTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGCGGATTTCTCAAAGGGGTGGTGGAGGGGACATAGTAATTTACAGAACCCTGCTGTTTGCTTTGTGTGATAATGGAGAGATAGAGCAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACCGGATTGACTTAGATCAATGCAGGAATAGCAAGCTCACTATTGGGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAATGAGATTGATCAGGGAGATAAAGTGGTTAGCCACATGGTAGCTAAAGGCTTCAGGCCACCGCCGTCAATCTATGAAGCAAAAGCGGCTGCATTATGCAAAGAAGGCAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAATAGTGAAGGGAAGTGGTGTTCCAACTGTTGCATTGTACAACATAGTTCTGAAGGGTCTGTGTGATGAGGGCAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCAAACAAAGGAACTTACAGCACTTTAGTACATGGACTTTGTCGTGAAAATCGATACGTTGAAGCATGCAAGGTTTTAGAGGAGATGGTTATCAAATCGTTTTCGCCTTGTTCTAACACATTCAATACACTAATTAGAGGCCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTCTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCAACCTGACTGGCACCGCTATATGGTCCAAGGTTTTATGA

Coding sequence (CDS)

ATGCAAAATAGAGGAGGCGATATGCTTAGCCAAATTCAATCCGAGATAACTTCTTCAAGCGCCGAAGTTGATTTTGAGGTGGGACAGAAAATCCCACTAAGATGGTGGCCAAGGCTTTTAACGCCTACATATTTATCTCAGATTATTAGGAAGCAGAATAATCCCTTAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCGGTGTACGCCGCGATGATTGATATACTCGGAAATTCGGGGAGGATTTCTGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTCTTGGGAGATTTAACTGTACCGATAGAACACAAACTTTTAATACCCTTTTGGAAATCCTGTTGAATCAATCTCAGCTTGATGCTGCCTGTCAGCTTTTTCAGCAGTGTTCTTATGGTTGGGAAGTGAAATCCAGGACTCTGTCCTTGAATTTGCTGATGCAATCTCTCTGCCAGAGAGGCCAGTCTGAACTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGTTGCTATCCAAATAGACTGAGTTATTTGATTTTAATGAAAGGATTGTGTCAAGATGGTAGGCTTAATGAGGCCATCCATTTGTTGTATTCCATGTTTTGGCGGATTTCTCAAAGGGGTGGTGGAGGGGACATAGTAATTTACAGAACCCTGCTGTTTGCTTTGTGTGATAATGGAGAGATAGAGCAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACCGGATTGACTTAGATCAATGCAGGAATAGCAAGCTCACTATTGGGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAATGAGATTGATCAGGGAGATAAAGTGGTTAGCCACATGGTAGCTAAAGGCTTCAGGCCACCGCCGTCAATCTATGAAGCAAAAGCGGCTGCATTATGCAAAGAAGGCAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAATAGTGAAGGGAAGTGGTGTTCCAACTGTTGCATTGTACAACATAGTTCTGAAGGGTCTGTGTGATGAGGGCAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCAAACAAAGGAACTTACAGCACTTTAGTACATGGACTTTGTCGTGAAAATCGATACGTTGAAGCATGCAAGGTTTTAGAGGAGATGGTTATCAAATCGTTTTCGCCTTGTTCTAACACATTCAATACACTAATTAGAGGCCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTCTGTCTGGAATTCTTTGGTTTCATCTCTGTGTTGCAACCTGACTGGCACCGCTATATGGTCCAAGGTTTTATGA

Protein sequence

MQNRGGDMLSQIQSEITSSSAEVDFEVGQKIPLRWWPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSLCCNLTGTAIWSKVL
Homology
BLAST of CaUC06G106680.1 vs. NCBI nr
Match: XP_038874865.1 (pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida])

HSP 1 Score: 944.5 bits (2440), Expect = 3.9e-271
Identity = 462/493 (93.71%), Postives = 480/493 (97.36%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPTYLSQIIRKQNNPLTAYQLFKEAK RYPDYRHNGPVYAAMIDILGNSGR+SEM
Sbjct: 5   WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKRRYPDYRHNGPVYAAMIDILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REV+DQMRDDSCECKDSVFSFAIKTYASHGLLEDGI+LFKSLG+FNCT+RTQTFNTLLEI
Sbjct: 65  REVIDQMRDDSCECKDSVFSFAIKTYASHGLLEDGITLFKSLGKFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQLDAACQLFQ+ SYGW VKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQESSYGWAVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           +RLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNG+IEQA
Sbjct: 185 SRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGDIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIK LINEALIKGGIPSSDS+CAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKRLINEALIKGGIPSSDSFCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNENE DQGDKVVSHMVAKGFRPP SI+EAK AALCKEGKVDDAVKVIEEEIVKGS 
Sbjct: 305 VDLYNENETDQGDKVVSHMVAKGFRPPSSIFEAKVAALCKEGKVDDAVKVIEEEIVKGSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVA+KGTYSTLVHGLCRENRY+EAC
Sbjct: 365 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVADKGTYSTLVHGLCRENRYIEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLIRGLCSVGK YEAVMWLEEMISQGQLPHVSVWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIRGLCSVGKQYEAVMWLEEMISQGQLPHVSVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKV 529
           CC++ GT +WS+V
Sbjct: 485 CCDVAGTNMWSEV 497

BLAST of CaUC06G106680.1 vs. NCBI nr
Match: XP_016902498.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >XP_016902499.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >KAA0039806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK24691.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 2.9e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5   WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQL AACQLFQ+CSYGWEVKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN+ DQGDKVVSHM+AKGFRPP SIYEAK A+LCKEGKVDDAVKVIEE+IV GS 
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           CC++ G  + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497

BLAST of CaUC06G106680.1 vs. NCBI nr
Match: XP_004140638.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativus] >KGN46470.1 hypothetical protein Csa_005325 [Cucumis sativus])

HSP 1 Score: 916.4 bits (2367), Expect = 1.1e-262
Identity = 449/494 (90.89%), Postives = 470/494 (95.14%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI+ILGNSGR+SEM
Sbjct: 5   WPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCT+RTQTFNTLLEI
Sbjct: 65  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LL +SQL AACQLFQ+CSYGW VKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++GGGGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRNS LTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN+ DQGDKVVSHM+AKGFRPP  IYEAKAA+LCKEGKVDDAVKVIEE+IV G  
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV-GGC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAKQVGLVANK TYSTLVHGLC ENRY+EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLI+GLCSVGKHYEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           CC++ G  + S+VL
Sbjct: 485 CCDVAGIDMCSRVL 497

BLAST of CaUC06G106680.1 vs. NCBI nr
Match: XP_023004266.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004267.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004268.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004269.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004270.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima])

HSP 1 Score: 880.9 bits (2275), Expect = 5.3e-252
Identity = 433/494 (87.65%), Postives = 464/494 (93.93%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPRLLTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5   WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65  REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQLDAACQLFQQ S+GWEVKSRT SLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS++G GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKIL+KGLK+PKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           +DLYNENE DQGDKVVSHM+AKGF PP S+YEAKAAALCKEGKVDDAVKVIEEE VKGS 
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPTVALYNIVL GLC  GKSTVAME+LKKMAKQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           K+LEEMVIKS  PCSNTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           C N+ GT +WSKVL
Sbjct: 485 CFNVAGTFMWSKVL 498

BLAST of CaUC06G106680.1 vs. NCBI nr
Match: KAG6592948.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 878.6 bits (2269), Expect = 2.6e-251
Identity = 433/494 (87.65%), Postives = 462/494 (93.52%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPRLLTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5   WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65  REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQLDAACQLFQQ S+GWEVKSRT SLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS+RG GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKIL+KGLKAPKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           +DLYNENE DQGDKVVSHM+AKGF PP S+YEAKAAALCKEGKVDDAVKVIEEE VKGS 
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPTVALYNIVL GLC  GKSTVAME+LKKM KQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           K+LEEMVIKS  PCSNTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           C N+  T +WSKVL
Sbjct: 485 CFNVADTDMWSKVL 498

BLAST of CaUC06G106680.1 vs. ExPASy Swiss-Prot
Match: Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 9.7e-164
Identity = 274/481 (56.96%), Postives = 367/481 (76.30%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6   WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           + V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FNC + + +F+TLL+ 
Sbjct: 66  KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           ++ +S+L+AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           +R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           +EILGKILRKGLKAPKR ++ I+     +S   I  +K L+ E LI+G IP  DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
            DL+ E ++ +G++V+  M +KGF P P IY AK  ALC+ GK+ +AV VI +E+++G  
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           +PTV +YN+++KGLCD+GKS  A+ YLKKM+KQV  VAN+ TY TLV GLCR+ +++EA 
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           +V+EEM+IKS  P   T++ +I+GLC + + YEAVMWLEEM+SQ  +P  SVW +L  S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485

Query: 516 C 517
           C
Sbjct: 486 C 486

BLAST of CaUC06G106680.1 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.6e-44
Identity = 125/515 (24.27%), Postives = 239/515 (46.41%), Query Frame = 0

Query: 40  LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVM 99
           L P +++ +I+ Q +P+ A ++F   + +   ++H    Y ++I+ LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 100 DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEILLN 159
             MR++      + V+  A+K Y   G +++ +++F+ +  ++C     ++N ++ +L++
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 160 QSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 219
               D A +++ +      +     S  + M+S C+  +   AL +   M  Q C  N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 220 SYLILMKG-----------------------------------LCQDGRLNEAIHLLYSM 279
           +Y  ++ G                                   LC+ G + E   LL   
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD-- 244

Query: 280 FWRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCR 339
             ++ +RG   ++  Y   +  LC  GE++ AV ++G ++ +G K     +  +    C+
Sbjct: 245 --KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 304

Query: 340 NSKLTIGEI--KSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 399
           NSK    E+    ++NE L     P S +Y  +         +   +++V   V  GF P
Sbjct: 305 NSKFQEAEVYLGKMVNEGL----EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 364

Query: 400 PPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 459
               Y +    LC EG+ + A+ +  E + KG   P V LYN ++KGL ++G    A + 
Sbjct: 365 DQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQL 424

Query: 460 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLC 517
             +M+++ GL+    T++ LV+GLC+     +A  +++ M+ K + P   TFN LI G  
Sbjct: 425 ANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 484

BLAST of CaUC06G106680.1 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-43
Identity = 121/470 (25.74%), Postives = 224/470 (47.66%), Query Frame = 0

Query: 54  NPLTA---YQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMDQMRDDSCECK 113
           NPL A    ++FK A  +   ++      ++MI+   NSG    + +++ ++R ++    
Sbjct: 53  NPLEAPISEKMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII 112

Query: 114 DSVFSFAIKTYASHGLLEDGISLF-KSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLF 173
           +  F    + Y    L +  + LF + +  F C    ++FN++L +++N+       + +
Sbjct: 113 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 172

Query: 174 Q---QCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKG 233
                 +    +    LS NL++++LC+    + A+ VF+ M  + C P+  +Y  LM G
Sbjct: 173 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 232

Query: 234 LCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKG 293
           LC++ R++EA+ LL  M       G     VIY  L+  LC  G++ +  +++  +  KG
Sbjct: 233 LCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 292

Query: 294 LKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQ 353
               +  +  +    C   KL   +  SL+   +    IP+  +Y  +   L  +     
Sbjct: 293 CVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 352

Query: 354 GDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVL 413
             +++S M  +G+     IY    + L KEGK ++A+ +  +   KG   P + +Y++++
Sbjct: 353 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 412

Query: 414 KGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSF 473
            GLC EGK   A E L +M    G + N  TYS+L+ G  +     EA +V +EM     
Sbjct: 413 DGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 472

Query: 474 SPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSLC 517
           S     ++ LI GLC VG+  EA+M   +M++ G  P    ++S++  LC
Sbjct: 473 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513

BLAST of CaUC06G106680.1 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.7e-43
Identity = 120/489 (24.54%), Postives = 226/489 (46.22%), Query Frame = 0

Query: 17  TSSSAEVDFEVGQKIPLRWWPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNG 76
           ++S+A +     +K P++ WP+ L P  L  +I +Q N   A Q+F  A   +P + HN 
Sbjct: 24  SASAASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNY 83

Query: 77  PVYAAMIDILGNSGRISEMREVMDQMRDD--SCECKDSVFSFAIKTYASHGLLEDGISLF 136
             Y +++  L  +     +  +M  +R+     +C +++F   ++ Y   G  E  + +F
Sbjct: 84  DTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143

Query: 137 KSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQ 196
             +  F      ++ NTLL +L+   + D    +F+     + +     + NLL+++LC+
Sbjct: 144 LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 203

Query: 197 RGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGG 256
           +   E A  V  E+      PN ++Y  ++ G    G +  A  +L  M      RG   
Sbjct: 204 KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML----DRGWYP 263

Query: 257 DIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQ-CRNSKLTIGEIK 316
           D   Y  L+   C  G   +A  ++  + +  ++ P    Y + +   C+  K   GE +
Sbjct: 264 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKK--SGEAR 323

Query: 317 SLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAAL 376
           ++ +E L +  +P S   C +   L  ++++D+   +   M+     P  ++       L
Sbjct: 324 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 383

Query: 377 CKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVA 436
           CKEG+V +A K+  +E  KGS +P++  YN ++ G+C++G+ T A      M ++     
Sbjct: 384 CKEGRVTEARKLF-DEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER-KCKP 443

Query: 437 NKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWL 496
           N  TY+ L+ GL +     E  +VLEEM+     P   TF  L  GL  +GK  +A+  +
Sbjct: 444 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 502

Query: 497 EEMISQGQL 503
              +  G++
Sbjct: 504 SMAVMNGKV 502

BLAST of CaUC06G106680.1 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.8e-43
Identity = 124/515 (24.08%), Postives = 242/515 (46.99%), Query Frame = 0

Query: 41  TPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMD 100
           T   L   +R Q +   A +LF  A  + P++     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 101 QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SLGRFNCTDRTQTFNTLLEILLNQ 160
            M+   CE   S F   I++YA   L ++ +S+    +  F     T  +N +L +L++ 
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 161 SQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLC-------------------------- 220
           + L    ++       W +K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 221 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMF 280
                    + G  + AL + ++M    C  + +S  +++ G C++GR+ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 281 WRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN 340
              +Q G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C+ 
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK- 348

Query: 341 SKLTIGEIK---SLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 400
               +GE+K    ++++ + +   P++ +Y  +   L  EN++++  ++   + +KG  P
Sbjct: 349 ----LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 408

Query: 401 PPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 460
               + +    LC       A+++ EE   KG   P    YN+++  LC +GK   A+  
Sbjct: 409 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNM 468

Query: 461 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLC 517
           LK+M +  G   +  TY+TL+ G C+ N+  EA ++ +EM +   S  S T+NTLI GLC
Sbjct: 469 LKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 528

BLAST of CaUC06G106680.1 vs. ExPASy TrEMBL
Match: A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5   WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQL AACQLFQ+CSYGWEVKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN+ DQGDKVVSHM+AKGFRPP SIYEAK A+LCKEGKVDDAVKVIEE+IV GS 
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           CC++ G  + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497

BLAST of CaUC06G106680.1 vs. ExPASy TrEMBL
Match: A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 455/494 (92.11%), Postives = 476/494 (96.36%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMI+ILGNSGR+SEM
Sbjct: 5   WPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQL AACQLFQ+CSYGWEVKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++G GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRN+KLTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN+ DQGDKVVSHM+AKGFRPP SIYEAK A+LCKEGKVDDAVKVIEE+IV GS 
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV-GSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAK+VGLVANK TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           CC++ G  + SKVL
Sbjct: 485 CCDVAGIDMCSKVL 497

BLAST of CaUC06G106680.1 vs. ExPASy TrEMBL
Match: A0A0A0K9Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 5.5e-263
Identity = 449/494 (90.89%), Postives = 470/494 (95.14%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI+ILGNSGR+SEM
Sbjct: 5   WPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCT+RTQTFNTLLEI
Sbjct: 65  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LL +SQL AACQLFQ+CSYGW VKSRT SLNLLMQSLCQRGQSELALHVFQEMDYQSCYP
Sbjct: 125 LLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++GGGGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKRAHYRIDLDQCRNS LTI EIKSLINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN+ DQGDKVVSHM+AKGFRPP  IYEAKAA+LCKEGKVDDAVKVIEE+IV G  
Sbjct: 305 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV-GGC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAKQVGLVANK TYSTLVHGLC ENRY+EAC
Sbjct: 365 VPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           KVLEEMVIKSF PCSNTFNTLI+GLCSVGKHYEAVMWLEEMISQGQLPHV VWNSLVSSL
Sbjct: 425 KVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           CC++ G  + S+VL
Sbjct: 485 CCDVAGIDMCSRVL 497

BLAST of CaUC06G106680.1 vs. ExPASy TrEMBL
Match: A0A6J1KU44 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=3661 GN=LOC111497651 PE=4 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 2.6e-252
Identity = 433/494 (87.65%), Postives = 464/494 (93.93%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPRLLTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMI+ILGNSGRISEM
Sbjct: 5   WPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCTDRTQTFNTLLEI
Sbjct: 65  REVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+SQLDAACQLFQQ S+GWEVKSRT SLNLLMQSLCQRGQSELALHVF+EMDYQSCYP
Sbjct: 125 LLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLILMKGLCQDG+L+EAIHLLYSMFWRIS++G GGDIVIYRTLLFALCDNGEIEQA
Sbjct: 185 NRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGEIEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKIL+KGLK+PKRAHY IDL+ CR SKLT+ EIK LINEALIKGGIPSSDSYCAMA
Sbjct: 245 VEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           +DLYNENE DQGDKVVSHM+AKGF PP S+YEAKAAALCKEGKVDDAVKVIEEE VKGS 
Sbjct: 305 IDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           VPTVALYNIVL GLC  GKSTVAME+LKKMAKQVGLVA+K TYSTLVHGLCRENRY EAC
Sbjct: 365 VPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRYTEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           K+LEEMVIKS  PCSNTFNTLIRGLCSVGK Y+AVM LEEMISQGQLP +SVWN+LVSSL
Sbjct: 425 KLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSL 484

Query: 516 CCNLTGTAIWSKVL 530
           C N+ GT +WSKVL
Sbjct: 485 CFNVAGTFMWSKVL 498

BLAST of CaUC06G106680.1 vs. ExPASy TrEMBL
Match: A0A6J1DVG7 (pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=3673 GN=LOC111024421 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 2.2e-251
Identity = 424/491 (86.35%), Postives = 459/491 (93.48%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTPT+LSQIIRKQNNP TA+QLFKEAKCRYP YRHNGPVYAAMIDILGNSGR+ EM
Sbjct: 5   WPRMLTPTHLSQIIRKQNNPFTAFQLFKEAKCRYPGYRHNGPVYAAMIDILGNSGRVVEM 64

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           REV+DQM+DDSCECKDSVFSFAIKTYASHGLLE+GISLFKSLGRFNCT+RTQTFNTLLEI
Sbjct: 65  REVIDQMKDDSCECKDSVFSFAIKTYASHGLLEEGISLFKSLGRFNCTNRTQTFNTLLEI 124

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           LLN+S+LDAACQLFQQ SYGW VKSRT SLNLLMQSLCQR QSELALH+FQEMDYQ CYP
Sbjct: 125 LLNESRLDAACQLFQQSSYGWGVKSRTQSLNLLMQSLCQRAQSELALHIFQEMDYQGCYP 184

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           NRLSYLILMKGLCQDGRLNEA+HLLYSMFWRISQRG GGDIVIYRTLL+ALC NGE+EQA
Sbjct: 185 NRLSYLILMKGLCQDGRLNEAVHLLYSMFWRISQRGSGGDIVIYRTLLYALCANGEVEQA 244

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           VEILGKILRKGLKAPKR HYRIDLDQC+NSKLTI EIK L NEALIKGGIPS  +YCAMA
Sbjct: 245 VEILGKILRKGLKAPKRVHYRIDLDQCKNSKLTIDEIKRLFNEALIKGGIPSLATYCAMA 304

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
           VDLYNEN  DQGDKVVSHM+AKGFRPP SIYEAKAAALCKEGKVDDA++VI+EE VKGS 
Sbjct: 305 VDLYNENVTDQGDKVVSHMLAKGFRPPSSIYEAKAAALCKEGKVDDAMRVIDEETVKGSC 364

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           +P+VALYNIVLKGL +EGKSTVA+EYLKKMAKQVGLVA+K TYS LVHGLC ENRY+EAC
Sbjct: 365 IPSVALYNIVLKGLSNEGKSTVALEYLKKMAKQVGLVADKETYSILVHGLCAENRYIEAC 424

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           K+LEEMVIKS+ PCS+TFNTLI GLCS+GK YEAVMWLEEMISQGQLP +SVWNSLVSS+
Sbjct: 425 KMLEEMVIKSYRPCSDTFNTLIGGLCSIGKQYEAVMWLEEMISQGQLPELSVWNSLVSSV 484

Query: 516 CCNLTGTAIWS 527
           C N+ GT +W+
Sbjct: 485 CFNVAGTDVWT 495

BLAST of CaUC06G106680.1 vs. TAIR 10
Match: AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 578.2 bits (1489), Expect = 6.9e-165
Identity = 274/481 (56.96%), Postives = 367/481 (76.30%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6   WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           + V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FNC + + +F+TLL+ 
Sbjct: 66  KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           ++ +S+L+AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           +R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           +EILGKILRKGLKAPKR ++ I+     +S   I  +K L+ E LI+G IP  DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
            DL+ E ++ +G++V+  M +KGF P P IY AK  ALC+ GK+ +AV VI +E+++G  
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           +PTV +YN+++KGLCD+GKS  A+ YLKKM+KQV  VAN+ TY TLV GLCR+ +++EA 
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           +V+EEM+IKS  P   T++ +I+GLC + + YEAVMWLEEM+SQ  +P  SVW +L  S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485

Query: 516 C 517
           C
Sbjct: 486 C 486

BLAST of CaUC06G106680.1 vs. TAIR 10
Match: AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 578.2 bits (1489), Expect = 6.9e-165
Identity = 274/481 (56.96%), Postives = 367/481 (76.30%), Query Frame = 0

Query: 36  WPRLLTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEM 95
           WPR+LTP+ LSQI++KQ NP+TA +LF+EAK R+P Y HNG VYA MIDILG S R+ EM
Sbjct: 6   WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65

Query: 96  REVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEI 155
           + V+++M++DSCECKDSVF+  I+T++  G LED ISLFKSL  FNC + + +F+TLL+ 
Sbjct: 66  KYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125

Query: 156 LLNQSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 215
           ++ +S+L+AAC +F++  YGWEV SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ CYP
Sbjct: 126 MVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP 185

Query: 216 NRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQA 275
           +R SY ILMKG C +G+L EA HLLYSMFWRISQ+G G DIV+YR LL ALCD GE++ A
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDA 245

Query: 276 VEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMA 335
           +EILGKILRKGLKAPKR ++ I+     +S   I  +K L+ E LI+G IP  DSY AMA
Sbjct: 246 IEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMA 305

Query: 336 VDLYNENEIDQGDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSG 395
            DL+ E ++ +G++V+  M +KGF P P IY AK  ALC+ GK+ +AV VI +E+++G  
Sbjct: 306 TDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHC 365

Query: 396 VPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEAC 455
           +PTV +YN+++KGLCD+GKS  A+ YLKKM+KQV  VAN+ TY TLV GLCR+ +++EA 
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425

Query: 456 KVLEEMVIKSFSPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSL 515
           +V+EEM+IKS  P   T++ +I+GLC + + YEAVMWLEEM+SQ  +P  SVW +L  S+
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485

Query: 516 C 517
           C
Sbjct: 486 C 486

BLAST of CaUC06G106680.1 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 1.9e-45
Identity = 125/515 (24.27%), Postives = 239/515 (46.41%), Query Frame = 0

Query: 40  LTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVM 99
           L P +++ +I+ Q +P+ A ++F   + +   ++H    Y ++I+ LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 100 DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTDRTQTFNTLLEILLN 159
             MR++      + V+  A+K Y   G +++ +++F+ +  ++C     ++N ++ +L++
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 160 QSQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 219
               D A +++ +      +     S  + M+S C+  +   AL +   M  Q C  N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 220 SYLILMKG-----------------------------------LCQDGRLNEAIHLLYSM 279
           +Y  ++ G                                   LC+ G + E   LL   
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD-- 244

Query: 280 FWRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCR 339
             ++ +RG   ++  Y   +  LC  GE++ AV ++G ++ +G K     +  +    C+
Sbjct: 245 --KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 304

Query: 340 NSKLTIGEI--KSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 399
           NSK    E+    ++NE L     P S +Y  +         +   +++V   V  GF P
Sbjct: 305 NSKFQEAEVYLGKMVNEGL----EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 364

Query: 400 PPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 459
               Y +    LC EG+ + A+ +  E + KG   P V LYN ++KGL ++G    A + 
Sbjct: 365 DQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGLSNQGMILEAAQL 424

Query: 460 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLC 517
             +M+++ GL+    T++ LV+GLC+     +A  +++ M+ K + P   TFN LI G  
Sbjct: 425 ANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 484

BLAST of CaUC06G106680.1 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 7.1e-45
Identity = 121/470 (25.74%), Postives = 224/470 (47.66%), Query Frame = 0

Query: 54  NPLTA---YQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMDQMRDDSCECK 113
           NPL A    ++FK A  +   ++      ++MI+   NSG    + +++ ++R ++    
Sbjct: 53  NPLEAPISEKMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII 112

Query: 114 DSVFSFAIKTYASHGLLEDGISLF-KSLGRFNCTDRTQTFNTLLEILLNQSQLDAACQLF 173
           +  F    + Y    L +  + LF + +  F C    ++FN++L +++N+       + +
Sbjct: 113 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 172

Query: 174 Q---QCSYGWEVKSRTLSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLILMKG 233
                 +    +    LS NL++++LC+    + A+ VF+ M  + C P+  +Y  LM G
Sbjct: 173 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 232

Query: 234 LCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKG 293
           LC++ R++EA+ LL  M       G     VIY  L+  LC  G++ +  +++  +  KG
Sbjct: 233 LCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 292

Query: 294 LKAPKRAHYRIDLDQCRNSKLTIGEIKSLINEALIKGGIPSSDSYCAMAVDLYNENEIDQ 353
               +  +  +    C   KL   +  SL+   +    IP+  +Y  +   L  +     
Sbjct: 293 CVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 352

Query: 354 GDKVVSHMVAKGFRPPPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVL 413
             +++S M  +G+     IY    + L KEGK ++A+ +  +   KG   P + +Y++++
Sbjct: 353 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 412

Query: 414 KGLCDEGKSTVAMEYLKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSF 473
            GLC EGK   A E L +M    G + N  TYS+L+ G  +     EA +V +EM     
Sbjct: 413 DGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 472

Query: 474 SPCSNTFNTLIRGLCSVGKHYEAVMWLEEMISQGQLPHVSVWNSLVSSLC 517
           S     ++ LI GLC VG+  EA+M   +M++ G  P    ++S++  LC
Sbjct: 473 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513

BLAST of CaUC06G106680.1 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-44
Identity = 124/515 (24.08%), Postives = 242/515 (46.99%), Query Frame = 0

Query: 41  TPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMIDILGNSGRISEMREVMD 100
           T   L   +R Q +   A +LF  A  + P++     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 101 QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SLGRFNCTDRTQTFNTLLEILLNQ 160
            M+   CE   S F   I++YA   L ++ +S+    +  F     T  +N +L +L++ 
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 161 SQLDAACQLFQQCSYGWEVKSRTLSLNLLMQSLC-------------------------- 220
           + L    ++       W +K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 221 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLILMKGLCQDGRLNEAIHLLYSMF 280
                    + G  + AL + ++M    C  + +S  +++ G C++GR+ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 281 WRISQRGGGGDIVIYRTLLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRN 340
              +Q G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C+ 
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK- 348

Query: 341 SKLTIGEIK---SLINEALIKGGIPSSDSYCAMAVDLYNENEIDQGDKVVSHMVAKGFRP 400
               +GE+K    ++++ + +   P++ +Y  +   L  EN++++  ++   + +KG  P
Sbjct: 349 ----LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 408

Query: 401 PPSIYEAKAAALCKEGKVDDAVKVIEEEIVKGSGVPTVALYNIVLKGLCDEGKSTVAMEY 460
               + +    LC       A+++ EE   KG   P    YN+++  LC +GK   A+  
Sbjct: 409 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNM 468

Query: 461 LKKMAKQVGLVANKGTYSTLVHGLCRENRYVEACKVLEEMVIKSFSPCSNTFNTLIRGLC 517
           LK+M +  G   +  TY+TL+ G C+ N+  EA ++ +EM +   S  S T+NTLI GLC
Sbjct: 469 LKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 528

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038874865.13.9e-27193.71pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida][more]
XP_016902498.12.9e-26692.11PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cuc... [more]
XP_004140638.11.1e-26290.89pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativu... [more]
XP_023004266.15.3e-25287.65pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023... [more]
KAG6592948.12.6e-25187.65Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
Q9SYK19.7e-16456.96Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX... [more]
Q9CA582.6e-4424.27Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
O494361.0e-4325.74Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9FFE31.7e-4324.54Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop... [more]
Q9LFF13.8e-4324.08Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S4E2N81.4e-26692.11pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo... [more]
A0A5D3DM621.4e-26692.11Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0K9Q45.5e-26390.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1[more]
A0A6J1KU442.6e-25287.65pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=366... [more]
A0A6J1DVG72.2e-25186.35pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT1G05600.16.9e-16556.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05600.26.9e-16556.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74580.11.9e-4524.27Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.17.1e-4525.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.12.7e-4424.08Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 311..463
e-value: 1.4E-24
score: 89.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 464..520
e-value: 4.6E-8
score: 34.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 173..308
e-value: 2.1E-18
score: 68.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 41..159
e-value: 7.0E-17
score: 63.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 184..229
e-value: 2.0E-10
score: 40.7
coord: 437..482
e-value: 1.1E-11
score: 44.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 117..142
e-value: 1.2
score: 9.6
coord: 257..287
e-value: 0.0033
score: 17.6
coord: 372..388
e-value: 0.93
score: 9.9
coord: 402..426
e-value: 0.015
score: 15.5
coord: 79..107
e-value: 0.013
score: 15.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 219..243
e-value: 0.0016
score: 16.5
coord: 472..503
e-value: 1.9E-6
score: 25.7
coord: 257..288
e-value: 0.0026
score: 15.8
coord: 437..468
e-value: 1.5E-7
score: 29.2
coord: 185..216
e-value: 6.3E-5
score: 20.9
coord: 78..109
e-value: 1.1E-5
score: 23.2
coord: 401..434
e-value: 3.8E-4
score: 18.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 75..109
score: 9.097937
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..215
score: 9.492543
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 10.610596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 10.446177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 11.597113
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 36..528
NoneNo IPR availablePANTHERPTHR47932:SF36PPR CONTAINING PLANT-LIKE PROTEINcoord: 36..528

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC06G106680CaUC06G106680gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC06G106680.1-exonCaUC06G106680.1-exon-Ciama_Chr06:36159..37644exon
CaUC06G106680.1-exonCaUC06G106680.1-exon-Ciama_Chr06:37821..37979exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC06G106680.1-cdsCaUC06G106680.1-cds-Ciama_Chr06:36159..37644CDS
CaUC06G106680.1-cdsCaUC06G106680.1-cds-Ciama_Chr06:37821..37924CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC06G106680.1-five_prime_utrCaUC06G106680.1-five_prime_utr-Ciama_Chr06:37925..37979five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC06G106680.1CaUC06G106680.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding