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CaUC04G072700.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGGTAAGCTTCTCAAATCCCCCACGTTTTTTTACTTTGTTATTTCTTTTTAAAAAAAATCTATATTTTCAATTCTCAATCAAATACTACCCACCAAAATAAGTTTTCAAGATTACCGTCCATAAGTTTAACTTAATGAAAATTAAGTATATAAATATTATTTTTATTTATTAGTTTTATTAAAATTTAAAAATTAAGTGAAAGTAGTTTTTGAAAACTTATTTTTTATCATTTTGAAAGGGTAAATTGTGAGAAAATAATCATAATTTTTTAAGAAAAAAATACAAAATAGTTATCCTACTTTTAATTTTTAAAATATAACTTGATTTCTTAAAACAATGGTGTTGTTAAGTACATAAATTAATAGGTAGTAGTTGTATTTATACTCTTAATTTTTAAAAACTAAAGACCAAATGAGACTTAAACTATTGGAATGTTAAAATCTATAGGACTTGTATGGTTAAATTTTAAGAGTATTTTGCACTTTTTCTATTGAGTATTCATTGCTATTATGATTGTTTTTTCTTTTGAGCAAAGGACCATGACGTATAAATCAATAATACATATGTTAATTGAGTTATGCTCATGATAATTGTTATTATAATTTAGTACTCGTGACATTTTAGATCAAATAAATGACAATTTTCGAGGTTAAATTACAAGGTTTTATGTTTATATGGTCAACTTTTAAAAAAAATAAATAAAAAAAATTAAAATTTATAATAAGCATTTGAACTTTTAATTTATTGTCTAATATTTAAAGGTGTTCAGGAATGTTGAAATTTATTCGACAAAAACCTGAACATTTACAAACTTAATCAAAAGTTTAAAATTTTATCAAATATTAAATCAAATTTTATATCTAATAAATTAGTTAATTTGTAAATGATCAAAATTATTGTTTGAAAATAGTCGGTGGGGCATTTAATATTGCTACTCCCCAGAACTGCACTCATGCTGGTACTCCCATACCCATACCCCATTTATAATTATGATTATTAATGCCCTTGTCTCTTACTTTACTAAATTAAATTCATTATTCAAAACAACTTTCTCTAACTAATCTTTAATAATCCCATTCTAATTTATTATTTTATGTCAAATTACGTAACTAAATCGATTAAATTATGTATATAAAAAAGTTAGATCTTTCAATTGATATTAAAAGAGAGAAAAAAAAAAAAAATACTAAATATGTTATTGTTTGTGTGCAGCATGGACCAGATGAATGCATGTTGAATACTGTTGAAGCTTGCACGATTTCAATTTATCCCAATACAGTAAAACTCTTTTACCTTTTTTTAGTACAATAAGGGAGAGATTCAAATCACAAACTCTTTTACCTTTTTTTAGTACAATAAGGGAGAGATTCAAATCACAAACCTCTTGATCGGTACTAACACATTTATATTTATATTTATATGTTAATTAAGTTAAACTCTTTTACTATTATAAATATTTACATGTATTTTTTTCTAATATGCATTTAAAATCTTGCAAATATAACTTTCTTTGAGAAACTAGAATTTATACTAATTAATTAAGAAAATATATGAATTTATACTAATTAATTAAGAAAATATATGTTCAAAGCAAATATTGCTCAACAATAATTGATTTGCCCTTTCATTGAGGCCAGAAGTACATATCCTTATATTCCACATGTTATACTAAACAAGAATTAAAAAATTAAAAGAAAATTATTATGGATATTTCCAAGTTTCATGAATTGAAATCTTTTGATTGTTAATGGATACTTAGCAAGATGGATAAATCTGCCAACATTTGTGTTTTGGTCTGTGAAGGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGGTAACATTGCTTTCTTATCATCTTCTCTCTCTGTTTCTTTCCTTTTTTTTCTTGGTTGGACCCTGAGTAAAGCCAATGAAATGCAGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGTCAGTCAGCTTCAATTTGAGCTAGTTTTATCCTTGTTCTTTGCCATGTGATTCTTTGAAATGAAGCTGTTTTCTTTTGTCTGAATCAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCGGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGAAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGCATGGACCAGATGAATGCATGTTGAATACTGTTGAAGCTTGCACGATTTCAATTTATCCCAATACAGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCGGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGAAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA ATGAGTCGCCTTGGCCGGTGGTCGGCCGCCGTGACGGCTCTGTGTGGTGTGTTGCTGTTGTCGGCACCGCCGCCGTCGGCGTCTGAAAAAGTGACCGTGTCAGTGTATTACGAAGCTCTCTGCCCTTTCTGTGCGAACTTCGTGGTTTACCATTTGGTGAAGCTTTTTGAAAATGGACTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCGCCTTCTTTTGCCAGCATGGACCAGATGAATGCATGTTGAATACTGTTGAAGCTTGCACGATTTCAATTTATCCCAATACAGAAAAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGACATTGCCAAGTTGAGTGCTATACCAATAGATTGCTACAGAAATGGGCAGGGGAAAGTGCTTGAACAAAACTATGCTTCAGAAACTACTCACCTCAATCCGCCTCATCGATTTGTTCCATGGGTCATTGTTGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCTTACAAAGGCGGTGCTGCACCAGAAGCTTGCAAGTCTATACAACTCAATGACCGCCAATACCTGGAAAATGCCAATGGAGAAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTTTAA MSRLGRWSAAVTALCGVLLLSAPPPSASEKVTVSVYYEALCPFCANFVVYHLVKLFENGLISAVNLRMIPWGNAWIQPDGAFFCQHGPDECMLNTVEACTISIYPNTEKHFRFIHCVEGLTVQNRHNEWTKCFDIAKLSAIPIDCYRNGQGKVLEQNYASETTHLNPPHRFVPWVIVDNHPLQEDYQNFMAYICKAYKGGAAPEACKSIQLNDRQYLENANGESQVCYATTTRNSTF Homology
BLAST of CaUC04G072700.1 vs. NCBI nr
Match: XP_038883768.1 (gamma-interferon-responsive lysosomal thiol protein isoform X1 [Benincasa hispida]) HSP 1 Score: 468.4 bits (1204), Expect = 3.7e-128 Identity = 215/237 (90.72%), Postives = 227/237 (95.78%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. NCBI nr
Match: TYK10933.1 (gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124 Identity = 209/230 (90.87%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. NCBI nr
Match: XP_008464223.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo] >KAA0037728.1 gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 209/230 (90.87%), Postives = 217/230 (94.35%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. NCBI nr
Match: XP_004148608.1 (gamma-interferon-responsive lysosomal thiol protein [Cucumis sativus] >KGN54401.1 hypothetical protein Csa_018063 [Cucumis sativus]) HSP 1 Score: 450.7 bits (1158), Expect = 8.0e-123 Identity = 204/233 (87.55%), Postives = 218/233 (93.56%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. NCBI nr
Match: XP_022966573.1 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Cucurbita maxima]) HSP 1 Score: 425.2 bits (1092), Expect = 3.6e-115 Identity = 195/237 (82.28%), Postives = 213/237 (89.87%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33 Identity = 69/185 (37.30%), Postives = 102/185 (55.14%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy Swiss-Prot
Match: Q9ESY9 (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus OX=10090 GN=Ifi30 PE=1 SV=3) HSP 1 Score: 109.4 bits (272), Expect = 5.7e-23 Identity = 73/234 (31.20%), Postives = 109/234 (46.58%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.7e-23 Identity = 69/216 (31.94%), Postives = 105/216 (48.61%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.1e-21 Identity = 69/216 (31.94%), Postives = 104/216 (48.15%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy Swiss-Prot
Match: B3SP85 (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa OX=9823 GN=IFI30 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 70/218 (32.11%), Postives = 105/218 (48.17%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy TrEMBL
Match: A0A5D3CGA6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00130 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.0e-125 Identity = 209/230 (90.87%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy TrEMBL
Match: A0A5A7T4J7 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00210 PE=3 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.2e-125 Identity = 209/230 (90.87%), Postives = 217/230 (94.35%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy TrEMBL
Match: A0A1S3CLF7 (gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo OX=3656 GN=LOC103502154 PE=3 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.2e-125 Identity = 209/230 (90.87%), Postives = 217/230 (94.35%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy TrEMBL
Match: A0A0A0L2Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312830 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123 Identity = 204/233 (87.55%), Postives = 218/233 (93.56%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. ExPASy TrEMBL
Match: A0A6J1HSI5 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466215 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115 Identity = 195/237 (82.28%), Postives = 213/237 (89.87%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 249.2 bits (635), Expect = 3.3e-66 Identity = 106/210 (50.48%), Postives = 143/210 (68.10%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 221.5 bits (563), Expect = 7.3e-58 Identity = 94/184 (51.09%), Postives = 130/184 (70.65%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 171.4 bits (433), Expect = 8.7e-43 Identity = 80/188 (42.55%), Postives = 112/188 (59.57%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 168.7 bits (426), Expect = 5.6e-42 Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of CaUC04G072700.1 vs. TAIR 10
Match: AT4G12870.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 151.8 bits (382), Expect = 7.1e-37 Identity = 71/189 (37.57%), Postives = 109/189 (57.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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