CaUC03G059380.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G059380.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	C2H2-type domain-containing protein
Location	Ciama_Chr03: 13128087 .. 13128784 (+)
Sequence length	549
RNA-Seq Expression	CaUC03G059380.1
Synteny	CaUC03G059380.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTGAAACTTTGGAGCTTCACCAGAGTGCTAGACAGGCAGGTACTTAAACTTACGGTCCTTCCTATCTCTGAAACTTCAATGAATTATTAATTTAAGGTCTAAAGCTTATTTTCCTATTGCCTACTTTTTTAGCATCTGAACTTGGTCTTGAAGACACAGGCAAGAACATGGTGGAAATCATATTCCAGTCAAGCTGGCTGAAAAAGCAAAGCCAACTTGCAAAATTGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTTGAAATTCGAGGAATATAGGGACTCCATTAAAACCAAAGCCACCAAGCTTCCAAAGAAGTACCCCCGTTGCTGTGCAGCATGCAACGAACTCCTAAGGTTCCACTGCACCACCCAGGGCTGTTCATTGGGTCTAAATGGCTCTTCCAACCTCTGCAGTTCAATTCCACAATGCAATGTCTGTAGCAATCAAGAATGGGTTCAAGGTGGTTGTAGAAACTGTAGGGGCCGCTGGAAAGGCATTCTAACAACCGCTACAAGTGGAAAGGCTCACGATTGTGCTGGAGTATCATCGAACGGCCACGACAAACGAGCAATGCTGGTTTGCCAGGTAAATAGCTGGGAGGCTGAAGAAGAGTTCAGAAGACAGCATGGAGGATTACGATTCATTGGCCGGAGCAGCAGGCATGTCTTCCAATTTGGATGA

mRNA sequence

ATGAAAGCTGAAACTTTGGAGCTTCACCAGAGTGCTAGACAGGCAGTCAAGCTGGCTGAAAAAGCAAAGCCAACTTGCAAAATTGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTTGAAATTCGAGGAATATAGGGACTCCATTAAAACCAAAGCCACCAAGCTTCCAAAGAAGTACCCCCGTTGCTGTGCAGCATGCAACGAACTCCTAAGGTTCCACTGCACCACCCAGGGCTGTTCATTGGGTCTAAATGGCTCTTCCAACCTCTGCAGTTCAATTCCACAATGCAATGTCTGTAGCAATCAAGAATGGGTTCAAGGTGGTTGTAGAAACTGTAGGGGCCGCTGGAAAGGCATTCTAACAACCGCTACAAGTGGAAAGGCTCACGATTGTGCTGGAGTATCATCGAACGGCCACGACAAACGAGCAATGCTGGTTTGCCAGGTAAATAGCTGGGAGGCTGAAGAAGAGTTCAGAAGACAGCATGGAGGATTACGATTCATTGGCCGGAGCAGCAGGCATGTCTTCCAATTTGGATGA

Coding sequence (CDS)

ATGAAAGCTGAAACTTTGGAGCTTCACCAGAGTGCTAGACAGGCAGTCAAGCTGGCTGAAAAAGCAAAGCCAACTTGCAAAATTGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTTGAAATTCGAGGAATATAGGGACTCCATTAAAACCAAAGCCACCAAGCTTCCAAAGAAGTACCCCCGTTGCTGTGCAGCATGCAACGAACTCCTAAGGTTCCACTGCACCACCCAGGGCTGTTCATTGGGTCTAAATGGCTCTTCCAACCTCTGCAGTTCAATTCCACAATGCAATGTCTGTAGCAATCAAGAATGGGTTCAAGGTGGTTGTAGAAACTGTAGGGGCCGCTGGAAAGGCATTCTAACAACCGCTACAAGTGGAAAGGCTCACGATTGTGCTGGAGTATCATCGAACGGCCACGACAAACGAGCAATGCTGGTTTGCCAGGTAAATAGCTGGGAGGCTGAAGAAGAGTTCAGAAGACAGCATGGAGGATTACGATTCATTGGCCGGAGCAGCAGGCATGTCTTCCAATTTGGATGA

Protein sequence

MKAETLELHQSARQAVKLAEKAKPTCKIERILKVQNTPKTILKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNVCSNQEWVQGGCRNCRGRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQVNSWEAEEEFRRQHGGLRFIGRSSRHVFQFG

Homology

[Close]

BLAST of CaUC03G059380.1 vs. NCBI nr
Match: XP_022141510.1 (uncharacterized protein LOC111011869 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47
Identity = 113/172 (65.70%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MKAETLELHQS R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 208 MKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 267

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKK+PRC A  NELLRFHCTT  CSLGLNGSSNLC+SIPQCNV
Sbjct: 268 SKFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCNSIPQCNV 327

Query: 121 CSNQEWVQGGCRNC-RGRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQV 153
           CS    ++ G +       KGILTTATSGKAHD AG+SS+ +DKRAMLVC+V
Sbjct: 328 CS---IIKNGFKVAGEAAEKGILTTATSGKAHDSAGISSDSNDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. NCBI nr
Match: XP_038874395.1 (uncharacterized protein LOC120067077 [Benincasa hispida])

HSP 1 Score: 197.6 bits (501), Expect = 9.3e-47
Identity = 116/177 (65.54%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQS R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 206 MKPETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 265

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLGLNGSSNLCSSIPQCNV
Sbjct: 266 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGLNGSSNLCSSIPQCNV 325

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSNG-HDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD AGVSS+G +DKRAMLVC+V
Sbjct: 326 CS---IIKNGFKVAAEATGGDTGKGILTTATSGKAHDSAGVSSDGSNDKRAMLVCRV 379

[Close]

BLAST of CaUC03G059380.1 vs. NCBI nr
Match: XP_022990074.1 (uncharacterized protein LOC111487079 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45
Identity = 112/176 (63.64%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MKAETLELHQS R AV                      +K  P CKIERILKVQNT KTI
Sbjct: 204 MKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQAPICKIERILKVQNTAKTI 263

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KA KL KK+PRC A  NELLRFHCTT  CSLGLNGSSNLCSSIPQCNV
Sbjct: 264 SKFEEYRDSIKAKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNV 323

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD AG+SS+G+DKRAMLVC+V
Sbjct: 324 CS---IIKNGFKVAAEATGGDAGKGILTTATSGKAHDSAGISSDGNDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. NCBI nr
Match: XP_008465804.1 (PREDICTED: uncharacterized protein LOC103503399 [Cucumis melo] >KAA0047470.1 C2H2-like zinc finger protein [Cucumis melo var. makuwa] >TYJ98668.1 C2H2-like zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 3.0e-45
Identity = 113/177 (63.84%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQ+ R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 203 MKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 262

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLG NGSSNLCSSIPQCNV
Sbjct: 263 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNV 322

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSN-GHDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD  GVSS+ G DKRAMLVC+V
Sbjct: 323 CS---IIKNGFKVAAEATGGDSGKGILTTATSGKAHDSVGVSSDGGDDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. NCBI nr
Match: XP_004140330.1 (uncharacterized protein LOC101220433 [Cucumis sativus] >KGN50968.1 hypothetical protein Csa_008131 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-45
Identity = 111/174 (63.79%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQ+ R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 203 MKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 262

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLG NGSSNLCSSIPQCNV
Sbjct: 263 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNV 322

Query: 121 CS--NQEWVQGGCRNCRGRWKGILTTATSGKAHDCAGVSSN-GHDKRAMLVCQV 153
           CS     +            KGILTTATSGKAHD  GVSS+ G++KRAMLVC+V
Sbjct: 323 CSIIKNGFKMAAEATGGDAGKGILTTATSGKAHDSVGVSSDGGNNKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL
Match: A0A6J1CIA1 (uncharacterized protein LOC111011869 OS=Momordica charantia OX=3673 GN=LOC111011869 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.0e-48
Identity = 113/172 (65.70%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MKAETLELHQS R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 208 MKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 267

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKK+PRC A  NELLRFHCTT  CSLGLNGSSNLC+SIPQCNV
Sbjct: 268 SKFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCNSIPQCNV 327

Query: 121 CSNQEWVQGGCRNC-RGRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQV 153
           CS    ++ G +       KGILTTATSGKAHD AG+SS+ +DKRAMLVC+V
Sbjct: 328 CS---IIKNGFKVAGEAAEKGILTTATSGKAHDSAGISSDSNDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL
Match: A0A6J1JR26 (uncharacterized protein LOC111487079 OS=Cucurbita maxima OX=3661 GN=LOC111487079 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.5e-46
Identity = 112/176 (63.64%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MKAETLELHQS R AV                      +K  P CKIERILKVQNT KTI
Sbjct: 204 MKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQAPICKIERILKVQNTAKTI 263

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KA KL KK+PRC A  NELLRFHCTT  CSLGLNGSSNLCSSIPQCNV
Sbjct: 264 SKFEEYRDSIKAKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNV 323

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD AG+SS+G+DKRAMLVC+V
Sbjct: 324 CS---IIKNGFKVAAEATGGDAGKGILTTATSGKAHDSAGISSDGNDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL
Match: A0A5A7TWE1 (C2H2-like zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold507G00610 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45
Identity = 113/177 (63.84%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQ+ R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 203 MKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 262

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLG NGSSNLCSSIPQCNV
Sbjct: 263 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNV 322

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSN-GHDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD  GVSS+ G DKRAMLVC+V
Sbjct: 323 CS---IIKNGFKVAAEATGGDSGKGILTTATSGKAHDSVGVSSDGGDDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ33 (uncharacterized protein LOC103503399 OS=Cucumis melo OX=3656 GN=LOC103503399 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45
Identity = 113/177 (63.84%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQ+ R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 203 MKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 262

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLG NGSSNLCSSIPQCNV
Sbjct: 263 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNV 322

Query: 121 CSNQEWVQGGCRNCR-----GRWKGILTTATSGKAHDCAGVSSN-GHDKRAMLVCQV 153
           CS    ++ G +           KGILTTATSGKAHD  GVSS+ G DKRAMLVC+V
Sbjct: 323 CS---IIKNGFKVAAEATGGDSGKGILTTATSGKAHDSVGVSSDGGDDKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL
Match: A0A0A0KN18 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G375760 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 111/174 (63.79%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 1   MKAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTI 60
           MK ETLELHQ+ R AV                      +K  P CKIERILKVQNTPKTI
Sbjct: 203 MKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTI 262

Query: 61  LKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNV 120
            KFEEYRDSIK KATKLPKKYPRC A  NELLRFHCTT  CSLG NGSSNLCSSIPQCNV
Sbjct: 263 SKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGFNGSSNLCSSIPQCNV 322

Query: 121 CS--NQEWVQGGCRNCRGRWKGILTTATSGKAHDCAGVSSN-GHDKRAMLVCQV 153
           CS     +            KGILTTATSGKAHD  GVSS+ G++KRAMLVC+V
Sbjct: 323 CSIIKNGFKMAAEATGGDAGKGILTTATSGKAHDSVGVSSDGGNNKRAMLVCRV 376

[Close]

BLAST of CaUC03G059380.1 vs. TAIR 10
Match: AT1G75710.1 (C2H2-like zinc finger protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-27
Identity = 77/175 (44.00%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 2   KAETLELHQSARQAV-------------------KLAEKAKPTCKIERILKVQNTPKTIL 61
           K E+LELHQ+ R AV                      +K  P C+IERILKV NT +TI 
Sbjct: 215 KLESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDSPICQIERILKVHNTQRTIQ 274

Query: 62  KFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGLNGSSNLCSSIPQCNVC 121
           +FE+ RD++K +A +  +K  RC A  NELLRFHCTT  CSLG  GSS+LCS++P C VC
Sbjct: 275 RFEDCRDAVKARALQATRKDARCAADGNELLRFHCTTLTCSLGARGSSSLCSNLPVCGVC 334

Query: 122 S-----NQEWVQGGCRNCRGRWKGILTTATSGKAHDCAGVSSNGHDKRAMLVCQV 153
           +      Q    GG  N      G+ TTA+SG+A D    S +   +R MLVC+V
Sbjct: 335 TVIRHGFQGKSGGGGANVAN--AGVRTTASSGRADDLLRCSDDA--RRVMLVCRV 385

[Close]

BLAST of CaUC03G059380.1 vs. TAIR 10
Match: AT4G27240.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-23
Identity = 59/129 (45.74%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 27  KIERILKVQNTPKTILKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGL 86
           +I+RILKV N  KT+ +FEEYRD++K +A+KL KK+PRC A  NELLRFH TT  C+LG+
Sbjct: 251 RIDRILKVHNMQKTLARFEEYRDTVKIRASKLQKKHPRCIADGNELLRFHGTTVACALGI 310

Query: 87  NGSSNLCSSIPQCNVCSNQEWVQGG--CRNCRGRWKGILTTATSGKAHDCAGV-SSNGHD 146
           NGS++LCSS  +C VC     ++ G   +       G+ T +TS +A +   +    G D
Sbjct: 311 NGSTSLCSS-EKCCVC---RIIRNGFSAKREMNNGIGVFTASTSERAFESIVIGDGGGGD 370

Query: 147 KRAMLVCQV 153
           ++A++VC+V
Sbjct: 371 RKALIVCRV 375

[Close]

BLAST of CaUC03G059380.1 vs. TAIR 10
Match: AT5G54630.1 (zinc finger protein-related )

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-21
Identity = 58/144 (40.28%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 21  KAKPTC-KIERILKVQNTPKTILKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTT 80
           K++  C +I+R+LKV N  KT+ +FEEYR+++K +A+KL KK+PRC A  NELLRFH TT
Sbjct: 279 KSENQCGRIDRVLKVHNMQKTLARFEEYRETVKIRASKLQKKHPRCLADGNELLRFHGTT 338

Query: 81  QGCSLGLNGSSNLCSSIPQCNVCSNQEWVQGGCRNCR--GRWKGILTTATSGKAHDCAGV 140
             C LG+NGS+++C++  +C VC     ++ G  + R      G+ T +TSG+A +   +
Sbjct: 339 VACGLGINGSTSVCTA-EKCCVC---RIIRNGFSSKREKNNGVGVFTASTSGRAFE--SI 398

Query: 141 SSNGHD---------KRAMLVCQV 153
             NG D         ++ ++VC+V
Sbjct: 399 LVNGGDESGDVDRTVRKVLIVCRV 416

[Close]

BLAST of CaUC03G059380.1 vs. TAIR 10
Match: AT2G29660.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 52/135 (38.52%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 28  IERILKVQNTPKTILKFEEYRDSIKTKATKL---PKKY--PRCCAACNELLRFHCTTQGC 87
           I RILK+ N+ K + +FEEYR+ +K KA +     +++   RC A  NELLRF+C+T  C
Sbjct: 183 INRILKIHNSSKILTRFEEYREFVKAKAARSNGGGRRWDDERCVADGNELLRFYCSTFMC 242

Query: 88  SLGLNGSSNLCSSIPQCNVCSNQEWVQGGCRNCRGRWKGILTTATSGKAHDCAGVSSNG- 147
            LG NG SNLC     C++C     + G       +  GI T AT  + H          
Sbjct: 243 DLGQNGKSNLCGH-QYCSICG----IIGS--GFSPKLDGIATLATGWRGHVAVPEEVEEE 302

Query: 148 ----HDKRAMLVCQV 153
               + KRAMLVC+V
Sbjct: 303 FGFMNVKRAMLVCRV 310

[Close]

BLAST of CaUC03G059380.1 vs. TAIR 10
Match: AT1G11490.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 28  IERILKVQNTPKTILKFEEYRDSIKTKATKLPKKYPRCCAACNELLRFHCTTQGCSLGL- 87
           I  I K+QN  + +  FE+YR+ +K +A KL KK+ RC A  NE L FH TT  C+LG  
Sbjct: 185 ISAIFKIQNLQRVVADFEDYRELVKIRANKLSKKHSRCMADGNEFLGFHGTTLSCTLGFS 244

Query: 88  NGSSNLCSSIPQCNVCSNQEWVQGGCRNCR-GRWKGILTTATSGKAHDCAGVSS--NGHD 147
           N SSNLC S   C VC       G     R    KG+LT +TS  A +        N   
Sbjct: 245 NSSSNLCFS-DHCEVCHILR--HGFSPKTRPDGIKGVLTASTSSTALESIETDQGRNRGS 304

Query: 148 KRAMLVCQVNSWEAEEEFRRQHGGLRF 171
             A+++C+V +    +  +     L F
Sbjct: 305 LIAVVLCRVIAGRVHKPMQTFENSLGF 328

The following BLAST results are available for this feature:

BLAST of CaUC03G059380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141510.1	1.4e-47	65.70	uncharacterized protein LOC111011869 [Momordica charantia]	[more]
XP_038874395.1	9.3e-47	65.54	uncharacterized protein LOC120067077 [Benincasa hispida]	[more]
XP_022990074.1	1.8e-45	63.64	uncharacterized protein LOC111487079 [Cucurbita maxima]	[more]
XP_008465804.1	3.0e-45	63.84	PREDICTED: uncharacterized protein LOC103503399 [Cucumis melo] >KAA0047470.1 C2H...	[more]
XP_004140330.1	3.9e-45	63.79	uncharacterized protein LOC101220433 [Cucumis sativus] >KGN50968.1 hypothetical ...	[more]

BLAST of CaUC03G059380.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G059380.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIA1	7.0e-48	65.70	uncharacterized protein LOC111011869 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1JR26	8.5e-46	63.64	uncharacterized protein LOC111487079 OS=Cucurbita maxima OX=3661 GN=LOC111487079...	[more]
A0A5A7TWE1	1.5e-45	63.84	C2H2-like zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ33	1.5e-45	63.84	uncharacterized protein LOC103503399 OS=Cucumis melo OX=3656 GN=LOC103503399 PE=...	[more]
A0A0A0KN18	1.9e-45	63.79	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G375760 P...	[more]

BLAST of CaUC03G059380.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75710.1	1.4e-27	44.00	C2H2-like zinc finger protein	[more]
AT4G27240.1	3.4e-23	45.74	zinc finger (C2H2 type) family protein	[more]
AT5G54630.1	9.4e-21	40.28	zinc finger protein-related	[more]
AT2G29660.1	4.2e-13	38.52	zinc finger (C2H2 type) family protein	[more]
AT1G11490.1	1.2e-12	36.05	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.228.10		coord: 2..166 e-value: 6.5E-9 score: 37.5
None	No IPR available	PANTHER	PTHR31681	C2H2-LIKE ZINC FINGER PROTEIN	coord: 20..153
None	No IPR available	PANTHER	PTHR31681:SF3	C2H2-LIKE ZINC FINGER PROTEIN	coord: 20..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC03G059380	CaUC03G059380	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC03G059380.1-exon	CaUC03G059380.1-exon-Ciama_Chr03:13128087..13128132	exon
CaUC03G059380.1-exon	CaUC03G059380.1-exon-Ciama_Chr03:13128282..13128784	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC03G059380.1-cds	CaUC03G059380.1-cds-Ciama_Chr03:13128087..13128132	CDS
CaUC03G059380.1-cds	CaUC03G059380.1-cds-Ciama_Chr03:13128282..13128784	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC03G059380.1	CaUC03G059380.1-protein	polypeptide