CaUC03G054930.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G054930.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 5474033 .. 5474749 (-)
Sequence length237
RNA-Seq ExpressionCaUC03G054930.1
SyntenyCaUC03G054930.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAAAAGAGATCATTTTGTTTTCATTTCAAGAAGAAAAAGTGGTGCTGGAAATAGCAAGTGTGCTACTACTTAGTACTTTGAATGAATGCTGCAAGAAAAAGAAAAAGCTGACCTTTTTTTATTTTAATTTTTTTTTTTTTTTTAAATAATTGTTTTGTTGGTTCATTTTCCTTCTTTTCCTCCATTCTATAGATGATCATAAATATTTATTTGAAGGGTCTGGAAAATTTATCGTTCATTGAGCCATGTTTGGTTCTCTTTAAACTGCTGCTGTAACGTTGTGAATCTATGAGATAATGACAGAAGAGAAGGCGTTGCTTCCGCCAAACTCAGCAACTTCGTTGGTTGTGACGTTGCCATCTTCCCGACCACTTACATTAATTCATTTAATGAAGAAACGACACTGCTTCAGAAATTTCCAGCGCTCTGTGCTGATGATGGATGCTTTTGTTTTTATTTTTCCTGGCCCATTTATTTACATTGTCTTCAACAACATTTTTGCCTTTGGAGAAAAAAGGTTGTTTTTGGGAAAGTTTCAAGTTTTTTAGAACAGTATGGAGCTAATGAAATAAAATAATAGATGTGCCAAATTATATTGCTATTGTGATAGTACTATGTCTCCAGAAATCAAAATTGATAATGTTATCTATATTGGTTATTAACACAAATATCAATGCTTCTCATGTGAGAATTTGGCTCATACATTTATAA

mRNA sequence

ATGGAAGAGAAGGCGTTGCTTCCGCCAAACTCAGCAACTTCGTTGGTTGTGACGTTGCCATCTTCCCGACCACTTACATTAATTCATTTAATGAAGAAACGACACTGCTTCAGAAATTTCCAGCGCTCTGTGCTGATGATGGATGCTTTTAAATCAAAATTGATAATGTTATCTATATTGGTTATTAACACAAATATCAATGCTTCTCATGTGAGAATTTGGCTCATACATTTATAA

Coding sequence (CDS)

ATGGAAGAGAAGGCGTTGCTTCCGCCAAACTCAGCAACTTCGTTGGTTGTGACGTTGCCATCTTCCCGACCACTTACATTAATTCATTTAATGAAGAAACGACACTGCTTCAGAAATTTCCAGCGCTCTGTGCTGATGATGGATGCTTTTAAATCAAAATTGATAATGTTATCTATATTGGTTATTAACACAAATATCAATGCTTCTCATGTGAGAATTTGGCTCATACATTTATAA

Protein sequence

MEEKALLPPNSATSLVVTLPSSRPLTLIHLMKKRHCFRNFQRSVLMMDAFKSKLIMLSILVINTNINASHVRIWLIHL
Homology
The following BLAST results are available for this feature:
BLAST of CaUC03G054930.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC03G054930.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC03G054930.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC03G054930.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC03G054930CaUC03G054930gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC03G054930.1-exonCaUC03G054930.1-exon-Ciama_Chr03:5474033..5474119exon
CaUC03G054930.1-exonCaUC03G054930.1-exon-Ciama_Chr03:5474295..5474440exon
CaUC03G054930.1-exonCaUC03G054930.1-exon-Ciama_Chr03:5474746..5474749exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC03G054930.1-cdsCaUC03G054930.1-cds-Ciama_Chr03:5474033..5474119CDS
CaUC03G054930.1-cdsCaUC03G054930.1-cds-Ciama_Chr03:5474295..5474440CDS
CaUC03G054930.1-cdsCaUC03G054930.1-cds-Ciama_Chr03:5474746..5474749CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC03G054930.1CaUC03G054930.1-proteinpolypeptide