CaUC03G052370.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCATCCATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATGTAAGGAAGGAAGAAGACAATTGTCTCGAATAAAATTTTGGTCGAGATTTACAATGATTTTGGATTTTTTTTGTTTGGCAGTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGGTTTAAAAAAAGACTATACAAAAAATTAATTGCTGAATTTTATTTTTAAAAAATATATATAACAAATTAATTTTTTTGATTTTTTTTGTAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGGCCGGAGGAGCCGACAAGTGTGCTGCCAAGGTA TCCATCCATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGGCCGGAGGAGCCGACAAGTGTGCTGCCAAGGTA ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGGCCGGAGGAGCCGACAAGTGTGCTGCCAAGGTA MAAAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAAGGADKCAAKV Homology
BLAST of CaUC03G052370.1 vs. NCBI nr
Match: XP_038895755.1 (MLO-like protein 6 [Benincasa hispida]) HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67 Identity = 134/147 (91.16%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. NCBI nr
Match: XP_008463775.1 (PREDICTED: MLO-like protein 6 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 8.6e-67 Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. NCBI nr
Match: XP_004148785.1 (MLO-like protein 6 [Cucumis sativus] >KGN64744.1 hypothetical protein Csa_013905 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.7e-65 Identity = 131/147 (89.12%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. NCBI nr
Match: XP_023520012.1 (MLO-like protein 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62 Identity = 123/147 (83.67%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. NCBI nr
Match: KAG7019249.1 (MLO-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62 Identity = 123/147 (83.67%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy Swiss-Prot
Match: O80961 (MLO-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=MLO12 PE=1 SV=2) HSP 1 Score: 151.8 bits (382), Expect = 6.3e-36 Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy Swiss-Prot
Match: Q9SXB6 (MLO-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=MLO2 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 6.5e-33 Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy Swiss-Prot
Match: Q94KB7 (MLO-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=MLO6 PE=2 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 9.4e-32 Identity = 80/147 (54.42%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy Swiss-Prot
Match: O49873 (MLO protein homolog 1 OS=Hordeum vulgare OX=4513 GN=MLO-H1 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.8e-28 Identity = 72/145 (49.66%), Postives = 90/145 (62.07%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy Swiss-Prot
Match: A2YD22 (MLO protein homolog 1 OS=Oryza sativa subsp. indica OX=39946 GN=MLO1 PE=3 SV=2) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-26 Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy TrEMBL
Match: A0A1S3CK02 (MLO-like protein OS=Cucumis melo OX=3656 GN=LOC103501836 PE=3 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67 Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy TrEMBL
Match: A0A0A0LUR4 (MLO-like protein OS=Cucumis sativus OX=3659 GN=MLO PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65 Identity = 131/147 (89.12%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy TrEMBL
Match: A0A6J1HP25 (MLO-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464713 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 123/147 (83.67%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy TrEMBL
Match: A0A6J1I5F4 (MLO-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469404 PE=3 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. ExPASy TrEMBL
Match: A0A6P3YV43 (MLO-like protein 6 OS=Ziziphus jujuba OX=326968 GN=LOC107405169 PE=3 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47 Identity = 103/148 (69.59%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. TAIR 10
Match: AT2G39200.1 (Seven transmembrane MLO family protein ) HSP 1 Score: 151.8 bits (382), Expect = 4.5e-37 Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. TAIR 10
Match: AT1G11310.1 (Seven transmembrane MLO family protein ) HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34 Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. TAIR 10
Match: AT1G11310.2 (Seven transmembrane MLO family protein ) HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34 Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. TAIR 10
Match: AT1G61560.1 (Seven transmembrane MLO family protein ) HSP 1 Score: 137.9 bits (346), Expect = 6.7e-33 Identity = 80/147 (54.42%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of CaUC03G052370.1 vs. TAIR 10
Match: AT2G17430.1 (Seven transmembrane MLO family protein ) HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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