CaUC02G033460.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G033460.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Reverse transcriptase domain-containing protein
Location	Ciama_Chr02: 9610095 .. 9611678 (+)
Sequence length	729
RNA-Seq Expression	CaUC02G033460.1
Synteny	CaUC02G033460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAGAGGAAGCACGAAGCTCATTCGTGGAGCGTGTGCAAGTCAAAGGACCTATGACCCGAGGAAAATGGCGAGATGATGCACGTCTCACCAGCTTGGAAGAAGCGGTTGAAGAGGTGCAACTTGTCGTTGGTCGTCTAAGTGAACGCGTTGAAGAGCTTGTCCAAGATAGCTCAGAGATCACGGCGGTTGCCAAGGAGATGATCAAGGAGCTGGGACGGACGTTGGGGAAAGAGGTAAGTACCCTCTTTGATGAAGTAGCCAATCTTAGGAAGTTTGTGGAGGGGGAACTTCACGATCTTCGTGGTGAAGTCGACGACATGCGCAAGGAGTGTCGGTCGATGCGTAGTGCTAATGGTGGCGCATCCACCAGCACCTCATCCGCTGTGCGAGGCACCAATGGTGTGAAGGTGCCCAAGCCTGATACTTACGATGGCACAAGAAGTGCGACGGTGGTAGATAACTTCTTGTTCGGCCTAGAGCAATACTTCGAGGCCCTAGGCGTCATCGACGATGGTGCTAAGATTGCCAATGCGCCCAACTTCCTACGTGAGGCAGTGCAACTTTGGTGGCGTAGGAAGTATGCAGAACGTGAGTGAGACGGAAATAGCATCTGAACGTGGGGTCAATTCAAGGCAAAACTCCGAAAGCACTTTGTGCCCTACAATGTCGATACGGAAGCTCGAGGAAAATTTAGGAGATTAAGGCAGACTGGTAGTATTCCCGACTACATAAGCGAGTTTACCACCCTCATGCTGGAAATTGAAGGCCTATCCGACAAAGACGCACTCTTTTATTTTCGAGATGGTTTCAAGGATTGGGCGAAGATAGAGCTCGATAGGCGAGATGTGCAGATTCTTGATGATGCCATTGCTACCGCAGAGATGCTTGTGGATTTTTCAACCAAGACCAAAAAGGCCACGAAGAAGGAAGGAGAAGAGTTGGAGTCTGATGAATCTGATGGGCATAAGGCTGAGGGGAGCCATAGGAATGGTCGATGGAACAGGAAGAAGAATGGAAAAGCTGCCGACAAGAATGAAGGTAAGCCTTTCAAACGCCCTTGCTTCCTATGTGACGGGCCATATTGGACGAGAGATTGCCCGCAAAAGAAGGCGCTTAATGCCTTAGTGGCTCAATCCCGCGCGCAAGAACAAGTAAAGCCTGTGTGTCGAATGGGTTCCTTGCAGCAGATTAGCGCCATGATCGGTGGCTTCTCTCCACGGGAGATTGGGGAGGAGGGACAACTATACATTGATGCGAGGATCAACGGTATAGTTCATGAGGTGTTGCTCGACACAGGAGCATCACATAACTTCATTGATCCGAATAAGGTCGTGAGCCTTGGCCTCAAGGTCGTTGGAGGAGGTGGAAAGATGAAGTCGGTGAATTCCACAACCGTGGATGCGAAGGGAATAGCCAAGGATGTTTTCTTAAAGGTGGGAAAATGGCGAGGTTTGGTTGATTTCACCGTGGTCTCGTTAGATGACTATAAGGTGGTTTTAGGCTTGGAGTTCTTCAGGAAAGCCAACGCCACCCTTTCACCTGCTTCCAAACAGTTGTCTTTGTATGATGGACAATGA

mRNA sequence

ATGGCCGCAGAGGAAGCACGAAGCTCATTCGTGGAGCGTGTGCAAGTCAAAGGACCTATGACCCGAGGAAAATGGCGAGATGATGCACAGTTGGAGTCTGATGAATCTGATGGGCATAAGGCTGAGGGGAGCCATAGGAATGGTCGATGGAACAGGAAGAAGAATGGAAAAGCTGCCGACAAGAATGAAGGTAAGCCTTTCAAACGCCCTTGCTTCCTATGTGACGGGCCATATTGGACGAGAGATTGCCCGCAAAAGAAGGCGCTTAATGCCTTAGTGGCTCAATCCCGCGCGCAAGAACAAGTAAAGCCTGTGTGTCGAATGGGTTCCTTGCAGCAGATTAGCGCCATGATCGGTGGCTTCTCTCCACGGGAGATTGGGGAGGAGGGACAACTATACATTGATGCGAGGATCAACGGTATAGTTCATGAGGTGTTGCTCGACACAGGAGCATCACATAACTTCATTGATCCGAATAAGGTCGTGAGCCTTGGCCTCAAGGTCGTTGGAGGAGGTGGAAAGATGAAGTCGGTGAATTCCACAACCGTGGATGCGAAGGGAATAGCCAAGGATGTTTTCTTAAAGGTGGGAAAATGGCGAGGTTTGGTTGATTTCACCGTGGTCTCGTTAGATGACTATAAGGTGGTTTTAGGCTTGGAGTTCTTCAGGAAAGCCAACGCCACCCTTTCACCTGCTTCCAAACAGTTGTCTTTGTATGATGGACAATGA

Coding sequence (CDS)

ATGGCCGCAGAGGAAGCACGAAGCTCATTCGTGGAGCGTGTGCAAGTCAAAGGACCTATGACCCGAGGAAAATGGCGAGATGATGCACAGTTGGAGTCTGATGAATCTGATGGGCATAAGGCTGAGGGGAGCCATAGGAATGGTCGATGGAACAGGAAGAAGAATGGAAAAGCTGCCGACAAGAATGAAGGTAAGCCTTTCAAACGCCCTTGCTTCCTATGTGACGGGCCATATTGGACGAGAGATTGCCCGCAAAAGAAGGCGCTTAATGCCTTAGTGGCTCAATCCCGCGCGCAAGAACAAGTAAAGCCTGTGTGTCGAATGGGTTCCTTGCAGCAGATTAGCGCCATGATCGGTGGCTTCTCTCCACGGGAGATTGGGGAGGAGGGACAACTATACATTGATGCGAGGATCAACGGTATAGTTCATGAGGTGTTGCTCGACACAGGAGCATCACATAACTTCATTGATCCGAATAAGGTCGTGAGCCTTGGCCTCAAGGTCGTTGGAGGAGGTGGAAAGATGAAGTCGGTGAATTCCACAACCGTGGATGCGAAGGGAATAGCCAAGGATGTTTTCTTAAAGGTGGGAAAATGGCGAGGTTTGGTTGATTTCACCGTGGTCTCGTTAGATGACTATAAGGTGGTTTTAGGCTTGGAGTTCTTCAGGAAAGCCAACGCCACCCTTTCACCTGCTTCCAAACAGTTGTCTTTGTATGATGGACAATGA

Protein sequence

MAAEEARSSFVERVQVKGPMTRGKWRDDAQLESDESDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQSRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKVVLGLEFFRKANATLSPASKQLSLYDGQ

Homology

[Close]

BLAST of CaUC02G033460.1 vs. NCBI nr
Match: TXG73104.1 (hypothetical protein EZV62_001683 [Acer yangbiense])

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-37
Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 36  SDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQ 95
           S G K EG  +    +++        N  KP K PCF+CDGP+W RDCP++K L+A+++Q
Sbjct: 305 SQGRKEEGQRKPSNTDKRNKPSGGKSNAPKP-KSPCFICDGPHWVRDCPKRKTLSAMMSQ 364

Query: 96  SRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNF 155
               ++      MGSL+Q+ A+ G  +P    ++G ++++A ING     +LDTGA+HNF
Sbjct: 365 HEENQEGGYEAGMGSLRQLGALKGNNAPSTSTKKGLMFVNASINGKAVRAMLDTGATHNF 424

Query: 156 IDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKV 215
           +  +K   LGLK   GGG +K+VNS      GIAK V + +G W G +DF+VV +DD++V
Sbjct: 425 VSLDKAKKLGLKATNGGGTIKAVNSPAKPIAGIAKAVPVCLGTWSGKLDFSVVPMDDFQV 484

Query: 216 VLGLEFFRKANATLSPASKQLSL 239
           VLG+EFF + +A   PA   L++
Sbjct: 485 VLGMEFFDQVHAFPFPAGNSLNI 506

[Close]

BLAST of CaUC02G033460.1 vs. NCBI nr
Match: XP_015389228.1 (uncharacterized protein LOC107178484 [Citrus sinensis])

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-36
Identity = 86/215 (40.00%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 37  DGHKAEGSHRNGRWNRKK-------NGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKAL 96
           +  K +G++R   W +KK        GK+  K E    + PCF+C+GP+W RDCP+K++L
Sbjct: 335 ESRKDKGNNRKD-WGQKKPPSNKSWQGKSEGKKEAPKPRSPCFICNGPHWVRDCPEKRSL 394

Query: 97  NALVAQSRAQEQV---KPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVL 156
           NAL AQ ++   +   +P   MGSLQ++ A+        + ++G +Y+ A++NG     L
Sbjct: 395 NALAAQLKSNPTMSTEEPQLSMGSLQRLGAL--NRQQPALVKKGLMYVSAKVNGQSVRAL 454

Query: 157 LDTGASHNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFT 216
           LDTGA+HNF+  ++   LGLK    GG MK+VNS      GIA+ V + +G W G +DF+
Sbjct: 455 LDTGATHNFVSVDEAKRLGLKATKEGGTMKAVNSPAKPIAGIAQGVHITLGTWSGKLDFS 514

Query: 217 VVSLDDYKVVLGLEFFRKANATLSPASKQLSLYDG 242
           +V +DD+K+VLG+EFF + +A   PA+  LS+ DG
Sbjct: 515 IVPMDDFKMVLGMEFFDQVHAFPLPATNSLSILDG 546

[Close]

BLAST of CaUC02G033460.1 vs. NCBI nr
Match: XP_006493831.1 (uncharacterized protein LOC102625991 [Citrus sinensis])

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-36
Identity = 86/215 (40.00%), Postives = 132/215 (61.40%), Query Frame = 0


Query: 37  DGHKAEGSHRNGRWNRKK-------NGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKAL 96
           +  K +G++R   W +KK        GK+  K E    + PCF+C+GP+W RDCP+K++L
Sbjct: 335 ESRKDKGNNRKD-WGQKKPPSNKSWQGKSEGKKEAPKPRSPCFICNGPHWVRDCPEKRSL 394

Query: 97  NALVAQSRAQEQV---KPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVL 156
           NAL AQ ++   +   +P   MGSLQ++ A+        + ++G +Y+ A++NG     L
Sbjct: 395 NALAAQLKSNPTMSTEEPQLSMGSLQRLGAL--NRQQPALVKKGLMYVSAKVNGQSVRAL 454

Query: 157 LDTGASHNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFT 216
           LDTGA+HNF+  ++   LGLK    GG MK+VNS      GIA+ V + +G W G +DF+
Sbjct: 455 LDTGATHNFVSVDEAKRLGLKATKEGGTMKAVNSPAKPIAGIAQGVHITLGTWSGKLDFS 514

Query: 217 VVSLDDYKVVLGLEFFRKANATLSPASKQLSLYDG 242
           +V +DD+K+VLG+EFF + +A   PA+  LS+ DG
Sbjct: 515 IVPMDDFKMVLGMEFFDQVHAFPLPATNSLSILDG 546

[Close]

BLAST of CaUC02G033460.1 vs. NCBI nr
Match: TXG71332.1 (hypothetical protein EZV62_006267 [Acer yangbiense])

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-35
Identity = 81/206 (39.32%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 36  SDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQ 95
           S   K EG  +    + K+N  +  K+E    K PCF+CDGP+W RDCP++K L+A+++Q
Sbjct: 224 SQCRKEEGQRKPSNTD-KRNKPSGGKSEAPKPKSPCFICDGPHWVRDCPKRKTLSAMMSQ 283

Query: 96  SRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNF 155
               +       MGSL+Q+ A+    +P    ++G ++++A ING     +LDTGA+HNF
Sbjct: 284 HEESQDRGYEAGMGSLRQLGALKSNNAPSTSTKKGLMFVNASINGKAVRAMLDTGATHNF 343

Query: 156 IDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKV 215
           +  ++  +LGL+    GG +K+VNS      GIAK V + +G W G +DF+VV +DD+++
Sbjct: 344 VSVDEAKTLGLQTTNRGGTIKAVNSPAKSIAGIAKAVPVCLGTWSGKLDFSVVPMDDFQL 403

Query: 216 VLGLEFFRKANATLSPASKQLSLYDG 242
           VLG+EFF + +A   PA   LS+ DG
Sbjct: 404 VLGMEFFDQVHAFPFPAGNSLSILDG 428

[Close]

BLAST of CaUC02G033460.1 vs. NCBI nr
Match: XP_015869899.1 (uncharacterized protein LOC107407175 [Ziziphus jujuba])

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-35
Identity = 82/209 (39.23%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 33  SDESDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNAL 92
           S E +  ++    ++ RW   + GK A K      K  CFLCDGP+W RDCP++KALNA+
Sbjct: 301 SKEDEREESAHKPKSSRWKPPREGKDASKP-----KNSCFLCDGPHWVRDCPKRKALNAM 360

Query: 93  VAQSRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGAS 152
             Q   +E+ +    +GSLQ ++A+    +P+E  + G ++++A++NG+  + L+DTGAS
Sbjct: 361 TTQ--YEEKQEEGTSIGSLQLLNAIKA--TPKETKKSGLMFVEAKLNGVPTKALVDTGAS 420

Query: 153 HNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDD 212
           HNF+   +   LG+K   G G +K+VNS     +G+A+ V   +G W G ++ TVVS+DD
Sbjct: 421 HNFLSVEEAQRLGIKATQGRGFVKAVNSDAKPLQGVARGVKTTIGDWEGQLNLTVVSMDD 480

Query: 213 YKVVLGLEFFRKANATLSPASKQLSLYDG 242
           YKVVLG++FF +  A   P + +L + DG
Sbjct: 481 YKVVLGMDFFNQVKAFPLPFANKLCIMDG 500

[Close]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL
Match: A0A5C7IW54 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001683 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 36  SDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQ 95
           S G K EG  +    +++        N  KP K PCF+CDGP+W RDCP++K L+A+++Q
Sbjct: 305 SQGRKEEGQRKPSNTDKRNKPSGGKSNAPKP-KSPCFICDGPHWVRDCPKRKTLSAMMSQ 364

Query: 96  SRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNF 155
               ++      MGSL+Q+ A+ G  +P    ++G ++++A ING     +LDTGA+HNF
Sbjct: 365 HEENQEGGYEAGMGSLRQLGALKGNNAPSTSTKKGLMFVNASINGKAVRAMLDTGATHNF 424

Query: 156 IDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKV 215
           +  +K   LGLK   GGG +K+VNS      GIAK V + +G W G +DF+VV +DD++V
Sbjct: 425 VSLDKAKKLGLKATNGGGTIKAVNSPAKPIAGIAKAVPVCLGTWSGKLDFSVVPMDDFQV 484

Query: 216 VLGLEFFRKANATLSPASKQLSL 239
           VLG+EFF + +A   PA   L++
Sbjct: 485 VLGMEFFDQVHAFPFPAGNSLNI 506

[Close]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL
Match: A0A6P3Z009 (uncharacterized protein LOC107407175 OS=Ziziphus jujuba OX=326968 GN=LOC107407175 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35
Identity = 82/209 (39.23%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 33  SDESDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNAL 92
           S E +  ++    ++ RW   + GK A K      K  CFLCDGP+W RDCP++KALNA+
Sbjct: 301 SKEDEREESAHKPKSSRWKPPREGKDASKP-----KNSCFLCDGPHWVRDCPKRKALNAM 360

Query: 93  VAQSRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGAS 152
             Q   +E+ +    +GSLQ ++A+    +P+E  + G ++++A++NG+  + L+DTGAS
Sbjct: 361 TTQ--YEEKQEEGTSIGSLQLLNAIKA--TPKETKKSGLMFVEAKLNGVPTKALVDTGAS 420

Query: 153 HNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDD 212
           HNF+   +   LG+K   G G +K+VNS     +G+A+ V   +G W G ++ TVVS+DD
Sbjct: 421 HNFLSVEEAQRLGIKATQGRGFVKAVNSDAKPLQGVARGVKTTIGDWEGQLNLTVVSMDD 480

Query: 213 YKVVLGLEFFRKANATLSPASKQLSLYDG 242
           YKVVLG++FF +  A   P + +L + DG
Sbjct: 481 YKVVLGMDFFNQVKAFPLPFANKLCIMDG 500

[Close]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL
Match: A0A5C7ISI1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_006267 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35
Identity = 81/206 (39.32%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 36  SDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQ 95
           S   K EG  +    + K+N  +  K+E    K PCF+CDGP+W RDCP++K L+A+++Q
Sbjct: 224 SQCRKEEGQRKPSNTD-KRNKPSGGKSEAPKPKSPCFICDGPHWVRDCPKRKTLSAMMSQ 283

Query: 96  SRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNF 155
               +       MGSL+Q+ A+    +P    ++G ++++A ING     +LDTGA+HNF
Sbjct: 284 HEESQDRGYEAGMGSLRQLGALKSNNAPSTSTKKGLMFVNASINGKAVRAMLDTGATHNF 343

Query: 156 IDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKV 215
           +  ++  +LGL+    GG +K+VNS      GIAK V + +G W G +DF+VV +DD+++
Sbjct: 344 VSVDEAKTLGLQTTNRGGTIKAVNSPAKSIAGIAKAVPVCLGTWSGKLDFSVVPMDDFQL 403

Query: 216 VLGLEFFRKANATLSPASKQLSLYDG 242
           VLG+EFF + +A   PA   LS+ DG
Sbjct: 404 VLGMEFFDQVHAFPFPAGNSLSILDG 428

[Close]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL
Match: A0A5C7GN37 (Retrotrans_gag domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027803 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35
Identity = 83/206 (40.29%), Postives = 125/206 (60.68%), Query Frame = 0


Query: 36  SDGHKAEGSHRNGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKALNALVAQ 95
           S G K EG  +    + K+N  +  K E    K PCF+CDGP+W RDCP++K LNA+++Q
Sbjct: 332 SQGRKEEGQRKPSNTD-KRNKSSGGKTEAPKPKSPCFICDGPHWVRDCPKRKTLNAIMSQ 391

Query: 96  SRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLDTGASHNF 155
               +  +    MGSL+Q+ A+    +P    ++G ++++A ING     +LDTGA+HNF
Sbjct: 392 HEESQDGEYEAGMGSLRQLGALKSNNAPSTSTKKGLMFVNASINGKAVRAMLDTGATHNF 451

Query: 156 IDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVVSLDDYKV 215
           +  ++   LGLK   GGG +K+  S      GIAK V + +G W G +DF++V +DD++V
Sbjct: 452 VSIDEAKKLGLKATSGGGTIKA--SPAKPIAGIAKAVPVCLGAWSGKLDFSIVPMDDFQV 511

Query: 216 VLGLEFFRKANATLSPASKQLSLYDG 242
           VLG+EFF + +A   PA   LS+ DG
Sbjct: 512 VLGMEFFDQVHA---PAGNSLSILDG 531

[Close]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL
Match: A0A6P6FTI3 (uncharacterized protein LOC107405525 OS=Ziziphus jujuba OX=326968 GN=LOC107405525 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33
Identity = 82/213 (38.50%), Postives = 131/213 (61.50%), Query Frame = 0


Query: 32  ESDESDGHK-AEGSHR--NGRWNRKKNGKAADKNEGKPFKRPCFLCDGPYWTRDCPQKKA 91
           ES +   HK  EG+H+  + +W   + GK A K      K  CFLCDGP+W RDCP++KA
Sbjct: 251 ESSKPKEHKREEGAHKPQSSKWKPPREGKDASKP-----KNSCFLCDGPHWVRDCPKRKA 310

Query: 92  LNALVAQSRAQEQVKPVCRMGSLQQISAMIGGFSPREIGEEGQLYIDARINGIVHEVLLD 151
           LNA+  Q   +E  +    MGS+Q ++A+    +P++  + G ++++A+ING++ + L+D
Sbjct: 311 LNAMTTQ--YEEGQEEEANMGSIQLLNAIKA--APKDSKKGGLMFVEAKINGVLTKALVD 370

Query: 152 TGASHNFIDPNKVVSLGLKVVGGGGKMKSVNSTTVDAKGIAKDVFLKVGKWRGLVDFTVV 211
           TGA+HNF+   +   LG+K +  GG MK+VNS      G+A+ V   +G+W G ++ +VV
Sbjct: 371 TGATHNFLSAEEARRLGVKPLKEGGSMKAVNSAAKPIHGVARGVQATIGEWVGQLNLSVV 430

Query: 212 SLDDYKVVLGLEFFRKANATLSPASKQLSLYDG 242
            +DD+KVVLG+EF  +  A   P +  + + DG
Sbjct: 431 PMDDFKVVLGMEFLDQVKAFPLPFANSMCIMDG 454

The following BLAST results are available for this feature:

BLAST of CaUC02G033460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG73104.1	3.1e-37	40.89	hypothetical protein EZV62_001683 [Acer yangbiense]	[more]
XP_015389228.1	2.6e-36	40.00	uncharacterized protein LOC107178484 [Citrus sinensis]	[more]
XP_006493831.1	2.6e-36	40.00	uncharacterized protein LOC102625991 [Citrus sinensis]	[more]
TXG71332.1	3.7e-35	39.32	hypothetical protein EZV62_006267 [Acer yangbiense]	[more]
XP_015869899.1	3.7e-35	39.23	uncharacterized protein LOC107407175 [Ziziphus jujuba]	[more]

BLAST of CaUC02G033460.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7IW54	1.5e-37	40.89	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001683 PE=4 SV=1	[more]
A0A6P3Z009	1.8e-35	39.23	uncharacterized protein LOC107407175 OS=Ziziphus jujuba OX=326968 GN=LOC10740717...	[more]
A0A5C7ISI1	1.8e-35	39.32	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_006267 PE=4 SV=1	[more]
A0A5C7GN37	3.1e-35	40.29	Retrotrans_gag domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_...	[more]
A0A6P6FTI3	1.3e-33	38.50	uncharacterized protein LOC107405525 OS=Ziziphus jujuba OX=326968 GN=LOC10740552...	[more]

BLAST of CaUC02G033460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 134..221 e-value: 1.8E-8 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 134..223 e-value: 4.08132E-15 score: 66.5912
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 112..241 e-value: 4.4E-20 score: 73.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 129..229
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 145..156

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC02G033460	CaUC02G033460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC02G033460.1-exon	CaUC02G033460.1-exon-Ciama_Chr02:9610095..9610182	exon
CaUC02G033460.1-exon	CaUC02G033460.1-exon-Ciama_Chr02:9611038..9611678	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC02G033460.1-cds	CaUC02G033460.1-cds-Ciama_Chr02:9610095..9610182	CDS
CaUC02G033460.1-cds	CaUC02G033460.1-cds-Ciama_Chr02:9611038..9611678	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC02G033460.1	CaUC02G033460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity