CaUC01G023720.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAGAATTCCATGAATCCGACATCATATTCGCCGACCACCGCCGCCGTCGCCTTTTCCACCCTTCACTCGACTACGCCCGAATCCTCCTCACAACGCATCGGAGCTCCAACGACGACGGCGACGATAACAACAACGACGACGACGACAACAACAACAAAGATTTCGCGGCCTCACTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGATGGACGAGGAATGGGACAGTGAAGACAACAATATAGTACCACCACACGTCATCATTGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA ATGGCTGAAGAATTCCATGAATCCGACATCATATTCGCCGACCACCGCCGCCGTCGCCTTTTCCACCCTTCACTCGACTACGCCCGAATCCTCCTCACAACGCATCGGAGCTCCAACGACGACGGCGACGATAACAACAACGACGACGACGACAACAACAACAAAGATTTCGCGGCCTCACTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGATGGACGAGGAATGGGACAGTGAAGACAACAATATAGTACCACCACACGTCATCATTGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA ATGGCTGAAGAATTCCATGAATCCGACATCATATTCGCCGACCACCGCCGCCGTCGCCTTTTCCACCCTTCACTCGACTACGCCCGAATCCTCCTCACAACGCATCGGAGCTCCAACGACGACGGCGACGATAACAACAACGACGACGACGACAACAACAACAAAGATTTCGCGGCCTCACTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGATGGACGAGGAATGGGACAGTGAAGACAACAATATAGTACCACCACACGTCATCATTGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA MAEEFHESDIIFADHRRRRLFHPSLDYARILLTTHRSSNDDGDDNNNDDDDNNNKDFAASLPVKIPETVFRYSSDMEEMDEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET Homology
BLAST of CaUC01G023720.1 vs. NCBI nr
Match: XP_038881487.1 (uncharacterized protein LOC120073009 [Benincasa hispida]) HSP 1 Score: 238.0 bits (606), Expect = 4.7e-59 Identity = 123/146 (84.25%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. NCBI nr
Match: XP_008439696.1 (PREDICTED: uncharacterized protein LOC103484414 [Cucumis melo]) HSP 1 Score: 218.4 bits (555), Expect = 3.9e-53 Identity = 121/153 (79.08%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. NCBI nr
Match: XP_004134921.2 (uncharacterized protein LOC101217175 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 6.2e-51 Identity = 117/153 (76.47%), Postives = 130/153 (84.97%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. NCBI nr
Match: XP_023544879.1 (uncharacterized protein LOC111804348 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.1 bits (518), Expect = 7.6e-49 Identity = 111/141 (78.72%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. NCBI nr
Match: XP_022977254.1 (uncharacterized protein LOC111477622 [Cucurbita maxima]) HSP 1 Score: 198.0 bits (502), Expect = 5.4e-47 Identity = 107/141 (75.89%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. ExPASy TrEMBL
Match: A0A1S3AZZ7 (uncharacterized protein LOC103484414 OS=Cucumis melo OX=3656 GN=LOC103484414 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53 Identity = 121/153 (79.08%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. ExPASy TrEMBL
Match: A0A0A0KNP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520440 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.0e-51 Identity = 117/153 (76.47%), Postives = 130/153 (84.97%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. ExPASy TrEMBL
Match: A0A6J1IQW7 (uncharacterized protein LOC111477622 OS=Cucurbita maxima OX=3661 GN=LOC111477622 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.6e-47 Identity = 107/141 (75.89%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. ExPASy TrEMBL
Match: A0A6J1EG03 (uncharacterized protein LOC111433041 OS=Cucurbita moschata OX=3662 GN=LOC111433041 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.5e-47 Identity = 107/141 (75.89%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. ExPASy TrEMBL
Match: A0A6J1KS02 (uncharacterized protein LOC111497106 OS=Cucurbita maxima OX=3661 GN=LOC111497106 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45 Identity = 97/138 (70.29%), Postives = 112/138 (81.16%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 109.0 bits (271), Expect = 3.1e-24 Identity = 65/152 (42.76%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 95.5 bits (236), Expect = 3.5e-20 Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 75.9 bits (185), Expect = 2.9e-14 Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 ) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12 Identity = 55/139 (39.57%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of CaUC01G023720.1 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 68.2 bits (165), Expect = 6.0e-12 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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