CaUC01G017870.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G017870.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 31313406 .. 31313901 (-)
Sequence length228
RNA-Seq ExpressionCaUC01G017870.1
SyntenyCaUC01G017870.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTCTCTTCTCTTTATTGGAATTTCCCAGTGAAATTTTTGGAATCAGTTAGGAAAACATATGATAATATAGCTTTCTTCAATATTTATATAGATAATTTGTTGTGTAAATGGTGTCTTAATGTTCAAGCAATTCAGATGAAAAGAATGCTTTTTTCGTACAGATTATTACATTCTAACATGCCAGCAGTAAAACTGTCTGCTGTCATCACTGGGGCAAATTTTATAGTTAAATTATTATTTTTTTTTTCTTTAAAAAAAAAAAAAAGGAAAATGATAGGTTTCGTGTTCATCATAATCCGATGGGTCTTTGCTCCCTCTGGGGTTCTATGTTTGTTTGTTTGCCCGTATGTACTCTCTTTTGTTTATTCTCTCGGTAATGATATTATATCAATTTCTTTTCAGAATAAAGAAAATGAACATTATGATATTAGTACATGGTACGAAAAGTTCGATGATATTGAATGTGGTCGTACGATAAATGTTGAATAA

mRNA sequence

ATGGAGGATAATTTGTTGTGTAAATGGTGTCTTAATGTTCAAGCAATTCAGATGAAAAGAATGCTTTTTTCGTACAGATTATTACATTCTAACATGCCAGCAGTAAAACTGTCTGCTGTCATCACTGGGGCAAATTTTATAAATAAAGAAAATGAACATTATGATATTAGTACATGGTACGAAAAGTTCGATGATATTGAATGTGGTCGTACGATAAATGTTGAATAA

Coding sequence (CDS)

ATGGAGGATAATTTGTTGTGTAAATGGTGTCTTAATGTTCAAGCAATTCAGATGAAAAGAATGCTTTTTTCGTACAGATTATTACATTCTAACATGCCAGCAGTAAAACTGTCTGCTGTCATCACTGGGGCAAATTTTATAAATAAAGAAAATGAACATTATGATATTAGTACATGGTACGAAAAGTTCGATGATATTGAATGTGGTCGTACGATAAATGTTGAATAA

Protein sequence

MEDNLLCKWCLNVQAIQMKRMLFSYRLLHSNMPAVKLSAVITGANFINKENEHYDISTWYEKFDDIECGRTINVE
Homology
The following BLAST results are available for this feature:
BLAST of CaUC01G017870.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G017870.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G017870.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G017870.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC01G017870CaUC01G017870gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC01G017870.1-exonCaUC01G017870.1-exon-Ciama_Chr01:31313406..31313492exon
CaUC01G017870.1-exonCaUC01G017870.1-exon-Ciama_Chr01:31313670..31313803exon
CaUC01G017870.1-exonCaUC01G017870.1-exon-Ciama_Chr01:31313895..31313901exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC01G017870.1-cdsCaUC01G017870.1-cds-Ciama_Chr01:31313406..31313492CDS
CaUC01G017870.1-cdsCaUC01G017870.1-cds-Ciama_Chr01:31313670..31313803CDS
CaUC01G017870.1-cdsCaUC01G017870.1-cds-Ciama_Chr01:31313895..31313901CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC01G017870.1CaUC01G017870.1-proteinpolypeptide