CaUC01G009400.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAATGAACCTCCTGATTTCATCAGGTTCTTTTCTTCTTCTTCTTCTTCTTCTTGTTTTGTTGGGTTTTCTCTTTTGCAGGTTTTAAACTTTGCTTTCTCTCTGTTATTAGTGTTGTTAATTATTGTGATGATGTTAATTTTGACACACATGTTTGCCTTTCTGATCTTGTCTATTTCTTGGAATTACTTCTTCAATTTCAGCTATGTAAGTTGGGTTTTACCTTTATTGGGATCATTAATGTCCAAATATGGATAAATTTGCTTGAATGTCTCTTTGGTTTCTAACCTTTTCATTAGGGCTCGGCCTTTAGTTTTTGGTTTCTTGTGTTTCTCATTGTTTGCTTACCATAGTTTTTAGTTTTCTTAGATAAGCATTTGAATTATTAGTAAAAATCTAAAAACAAAAACAATTTTTAGAAACTAATTTTTTTAAGTTTTCGAATTTTGGTTTGGTTGTTAAAAACATGGGTAGTAATTGACAACTCATAACGTAGAACTTCAGAGGTTTAGAGGTTAAAGTAGAGTTCATGACCTTAATTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAACTGTACCTATATGGGGCCTAAAAACCTCAATTTGGCTAAAAATTCAAATGGTTATTTAGGACTATGAAAACCATGGTGAGGAAGTTGTAAAGAAAATTAACACAAATTTCAAATACTAATGCTATTAATTTTACAAGTTTAGTCTATAAACTGCTCACTCAGTTCTTTAATTTTGGGAAGTGTCGGGTTCTAAACTTTAAAAGTGTCAAATAGGCACTTGTCGACATGGTTCCAAAATGATGCATCTATTAGACATACAAGGAGACTCCTTTGTTCTTTACTTTTTGTCCACTCTCACAATTAATCAAAGAAACTTAGAGATTTCTATTTCACAATGGATGGAATTATTAGATCTTGGACTCGAAAAAATGTCGAGATATTGGGATGACTCATGTTGCATATCACTAAGGCAAAAGACGATTGTGTTATTTTTTAGGAATGTCACTATTGACCCCATGGCCCAAGGGGAAGGTTTTGAAATTTGAAACGGGCATATTGAAACTAACCTAAAAATATTTGATTGTTTAATATATCATTTTCAGGATGGAGGGCAATCGCAGCATAGACTGGAATATGGAAGAACAACTATCCTCTGATGATGGCCTGAGCAGTGAAAAGATACGCTCCGTTGTGCAAAGGGGCTGCAATGTGGGGAAGAAGCTTCTCATCACTGGTTTAGCCATATCCTCTGCTCCTGTGGTTCTTCCTCCATTGGTTATCATGTCAGCCTTTGGATTTGTAGCCTCAATTCCCTATGGAGTCTTCCTCGTCTCTTACGCTTGCACCGAAACGATCATGAGTGTTTGGCTTCCAATTCCCCCACCCCTTGAACTTGACCATGTTGACAAAGAAATAGTGGAGGAAAATGGCTACGAAGATGAAGGAGAACGTGAAGATGAAGAAAAGGAAGGCATCATCGATTACGAAGATGAAGGAGAACGTGAGATGGAAACAACAAAGAGTGGTGAGATTTTGGATCATTTGGATAATGACGCGGCAGTAGTTCAGGGGGACGAAGAGGACGAACCTGACGTTGGAAGCAGAGATCAAGGGGCAGTCATAGAAGTGACCAATGTAGAATTTGAAGGAAATGGAGATATTGGAGATGAGGAAGAACAGTTGGAAGAAGCTAGGGGTTTGCTCAAAAGAATCCGGGACGAGGGAAGAAGAGACGAGGATTTTGCTGAGACAAATGGCAGCATTGATCATGTTCAAGAGCTCGACATTTCGATGGAAGTTGCCAAACCAAGTGATTCTGCTGAAAATAGTGTTCATGGTTTGTTGAATGAAATTGACTCTGCTGCTGTTCATCCTCATTTAGAGTATGGAGCTTCTGAAGGTAATTGATTCATATCACACTTTTTCTACAATGATGTTAATTTTTAAAAAATAAATCAAATAGCCACAAGTATTTACTTTACACTAGTGAAGATATCTGGTTTATAAGTTAAAGTTGGTGTAATTTAGAGTTAATTAGAATTCGAGTGTATGCTTAGAGCGAGAGTTTGTTTATTACAAGTCACAAGTCTGATTTTTCTTTTTTAGGTAGAGAATTCGAAAATTGACCTTTACGATGGATATATATTATATGAATCAATATGTAATAACATGAATTGACAAATTTGCGCTTTGTTTTTGATGAAGTTGCAGTCTCAAGCAAGCTTGCCAAGGCTGAAGAAGCTGAACAACTTCTTTCAGTAACAATGATTGATGTGATTGAATCTGAAGAGGATTTGTCTATATCAGCTGTGACTATTGAACCCAAAGTTGAGGCAAATGCTCCACATAAAGATTATAGGGTGTCTTCCAATGAGGTTAGTATATACTATAAAGATGTCAAATTAATTTGCGTACTATGGTCTCAGTATCTTTTGTGCATGTTTTCCGTTTTACCATTTAGTGTTAGAGTGAGCTAGATATATATATATATATATATATATATATATATATAACTTTTACTAGAGTGAGTTGAACTCTCAAAAGTCATTCTAAACTTGTATTTTTAAGGGTATGTTTAGGAGTGATTTTAAAATCACTTCTATTTGAAAAAATCGATGTTTGGTAAATGTTGAAATTGATTTCAAAATGATCGATAATCATTTGAAATCAATTTTCAACCAATTGTTGAAATGTGCTTACAATATTTGCCCCAAAATATTTTAAGTGAACTTTTTCCTATTTATGTATTGATACTTTTTTAAACTAAGAAAACTTTTAAAAGTTTGGAACCACGCATCTATATGATTTTGTAAAAATCAATTTTACAAAATCCGTTGTACCATAATCTCTTTTTTTGAACCACTACTCCAACATCGCTCTCGATTTTTGAAGTAGCGCTTTTGCATGTCTGGAAATAGCACTAGCAAGTACTTCGACTTGAGTTATAAGGAACAAATTTTGAAAGGGGTACTTCTCAATTTGGATTGATTAGAAATCACTTTTGAACTCTTTTAAAGATCCTACTGAAATTTATCTTATTATTCAAAACCCAAATGTGAATGGCTAATTTTATTTTCATTCACATTAGATGTTTATTTACTTCTGCAACCTTATCTGTTCTTACCATCAACTTTGGCATAATCAATTTCTTGGGCCTTATGGATTGAGTGTTTGAAATTTTGAGCTTTTTTTTTCTTTTCTTTTTGCAAGGAATTATCAAGCGAGGTAAAGGTAAGAGAAAATATTGTCTCGATGAAGAAAATCATAGGATACAATGCCACACCCCTTGGAACGTACATGGACGAAGTGAATGCTCTTTATGCTTTCGTCGGTGTCGAGCCTCCTTCCCCACTGAAAGAATCTTCTGATGATGATCTCAATCTACTTAACCAGAAGTTGCAGTTTCTCATGTCCATAGTAGGAGTGAAGTAG ATGGCCAATGAACCTCCTGATTTCATCAGGATGGAGGGCAATCGCAGCATAGACTGGAATATGGAAGAACAACTATCCTCTGATGATGGCCTGAGCAGTGAAAAGATACGCTCCGTTGTGCAAAGGGGCTGCAATGTGGGGAAGAAGCTTCTCATCACTGGTTTAGCCATATCCTCTGCTCCTGTGGTTCTTCCTCCATTGGTTATCATGTCAGCCTTTGGATTTGTAGCCTCAATTCCCTATGGAGTCTTCCTCGTCTCTTACGCTTGCACCGAAACGATCATGAGTGTTTGGCTTCCAATTCCCCCACCCCTTGAACTTGACCATGTTGACAAAGAAATAGTGGAGGAAAATGGCTACGAAGATGAAGGAGAACGTGAAGATGAAGAAAAGGAAGGCATCATCGATTACGAAGATGAAGGAGAACGTGAGATGGAAACAACAAAGAGTGGTGAGATTTTGGATCATTTGGATAATGACGCGGCAGTAGTTCAGGGGGACGAAGAGGACGAACCTGACGTTGGAAGCAGAGATCAAGGGGCAGTCATAGAAGTGACCAATGTAGAATTTGAAGGAAATGGAGATATTGGAGATGAGGAAGAACAGTTGGAAGAAGCTAGGGGTTTGCTCAAAAGAATCCGGGACGAGGGAAGAAGAGACGAGGATTTTGCTGAGACAAATGGCAGCATTGATCATGTTCAAGAGCTCGACATTTCGATGGAAGTTGCCAAACCAAGTGATTCTGCTGAAAATAGTGTTCATGGTTTGTTGAATGAAATTGACTCTGCTGCTGTTCATCCTCATTTAGAGTATGGAGCTTCTGAAGTTGCAGTCTCAAGCAAGCTTGCCAAGGCTGAAGAAGCTGAACAACTTCTTTCAGTAACAATGATTGATGTGATTGAATCTGAAGAGGATTTGTCTATATCAGCTGTGACTATTGAACCCAAAGTTGAGGCAAATGCTCCACATAAAGATTATAGGGTGTCTTCCAATGAGGAATTATCAAGCGAGGTAAAGGTAAGAGAAAATATTGTCTCGATGAAGAAAATCATAGGATACAATGCCACACCCCTTGGAACGTACATGGACGAAGTGAATGCTCTTTATGCTTTCGTCGGTGTCGAGCCTCCTTCCCCACTGAAAGAATCTTCTGATGATGATCTCAATCTACTTAACCAGAAGTTGCAGTTTCTCATGTCCATAGTAGGAGTGAAGTAG ATGGCCAATGAACCTCCTGATTTCATCAGGATGGAGGGCAATCGCAGCATAGACTGGAATATGGAAGAACAACTATCCTCTGATGATGGCCTGAGCAGTGAAAAGATACGCTCCGTTGTGCAAAGGGGCTGCAATGTGGGGAAGAAGCTTCTCATCACTGGTTTAGCCATATCCTCTGCTCCTGTGGTTCTTCCTCCATTGGTTATCATGTCAGCCTTTGGATTTGTAGCCTCAATTCCCTATGGAGTCTTCCTCGTCTCTTACGCTTGCACCGAAACGATCATGAGTGTTTGGCTTCCAATTCCCCCACCCCTTGAACTTGACCATGTTGACAAAGAAATAGTGGAGGAAAATGGCTACGAAGATGAAGGAGAACGTGAAGATGAAGAAAAGGAAGGCATCATCGATTACGAAGATGAAGGAGAACGTGAGATGGAAACAACAAAGAGTGGTGAGATTTTGGATCATTTGGATAATGACGCGGCAGTAGTTCAGGGGGACGAAGAGGACGAACCTGACGTTGGAAGCAGAGATCAAGGGGCAGTCATAGAAGTGACCAATGTAGAATTTGAAGGAAATGGAGATATTGGAGATGAGGAAGAACAGTTGGAAGAAGCTAGGGGTTTGCTCAAAAGAATCCGGGACGAGGGAAGAAGAGACGAGGATTTTGCTGAGACAAATGGCAGCATTGATCATGTTCAAGAGCTCGACATTTCGATGGAAGTTGCCAAACCAAGTGATTCTGCTGAAAATAGTGTTCATGGTTTGTTGAATGAAATTGACTCTGCTGCTGTTCATCCTCATTTAGAGTATGGAGCTTCTGAAGTTGCAGTCTCAAGCAAGCTTGCCAAGGCTGAAGAAGCTGAACAACTTCTTTCAGTAACAATGATTGATGTGATTGAATCTGAAGAGGATTTGTCTATATCAGCTGTGACTATTGAACCCAAAGTTGAGGCAAATGCTCCACATAAAGATTATAGGGTGTCTTCCAATGAGGAATTATCAAGCGAGGTAAAGGTAAGAGAAAATATTGTCTCGATGAAGAAAATCATAGGATACAATGCCACACCCCTTGGAACGTACATGGACGAAGTGAATGCTCTTTATGCTTTCGTCGGTGTCGAGCCTCCTTCCCCACTGAAAGAATCTTCTGATGATGATCTCAATCTACTTAACCAGAAGTTGCAGTTTCTCATGTCCATAGTAGGAGTGAAGTAG MANEPPDFIRMEGNRSIDWNMEEQLSSDDGLSSEKIRSVVQRGCNVGKKLLITGLAISSAPVVLPPLVIMSAFGFVASIPYGVFLVSYACTETIMSVWLPIPPPLELDHVDKEIVEENGYEDEGEREDEEKEGIIDYEDEGEREMETTKSGEILDHLDNDAAVVQGDEEDEPDVGSRDQGAVIEVTNVEFEGNGDIGDEEEQLEEARGLLKRIRDEGRRDEDFAETNGSIDHVQELDISMEVAKPSDSAENSVHGLLNEIDSAAVHPHLEYGASEVAVSSKLAKAEEAEQLLSVTMIDVIESEEDLSISAVTIEPKVEANAPHKDYRVSSNEELSSEVKVRENIVSMKKIIGYNATPLGTYMDEVNALYAFVGVEPPSPLKESSDDDLNLLNQKLQFLMSIVGVK Homology
BLAST of CaUC01G009400.1 vs. NCBI nr
Match: XP_038894925.1 (uncharacterized protein LOC120083308 isoform X1 [Benincasa hispida]) HSP 1 Score: 642.1 bits (1655), Expect = 3.2e-180 Identity = 347/405 (85.68%), Postives = 369/405 (91.11%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. NCBI nr
Match: XP_038894927.1 (uncharacterized protein LOC120083308 isoform X2 [Benincasa hispida]) HSP 1 Score: 634.4 bits (1635), Expect = 6.6e-178 Identity = 345/405 (85.19%), Postives = 367/405 (90.62%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. NCBI nr
Match: XP_011659364.1 (uncharacterized protein LOC105436169 isoform X1 [Cucumis sativus] >KGN65973.1 hypothetical protein Csa_023244 [Cucumis sativus]) HSP 1 Score: 563.5 bits (1451), Expect = 1.4e-156 Identity = 315/408 (77.21%), Postives = 358/408 (87.75%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. NCBI nr
Match: XP_008459103.1 (PREDICTED: uncharacterized protein LOC103498312 [Cucumis melo]) HSP 1 Score: 553.9 bits (1426), Expect = 1.1e-153 Identity = 313/406 (77.09%), Postives = 347/406 (85.47%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. NCBI nr
Match: XP_031736269.1 (uncharacterized protein LOC105436169 isoform X2 [Cucumis sativus]) HSP 1 Score: 551.6 bits (1420), Expect = 5.7e-153 Identity = 308/397 (77.58%), Postives = 349/397 (87.91%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. ExPASy TrEMBL
Match: A0A0A0LW30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555090 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 7.0e-157 Identity = 315/408 (77.21%), Postives = 358/408 (87.75%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. ExPASy TrEMBL
Match: A0A1S3CAL8 (uncharacterized protein LOC103498312 OS=Cucumis melo OX=3656 GN=LOC103498312 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 5.5e-154 Identity = 313/406 (77.09%), Postives = 347/406 (85.47%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. ExPASy TrEMBL
Match: A0A5A7TQ38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00030 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 1.1e-149 Identity = 304/395 (76.96%), Postives = 338/395 (85.57%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. ExPASy TrEMBL
Match: A0A6J1H9E7 (uncharacterized protein LOC111461753 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461753 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 8.8e-144 Identity = 293/423 (69.27%), Postives = 329/423 (77.78%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. ExPASy TrEMBL
Match: A0A6J1J9E9 (uncharacterized protein LOC111484754 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484754 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 9.8e-143 Identity = 290/423 (68.56%), Postives = 331/423 (78.25%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. TAIR 10
Match: AT1G65090.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1). ) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-18 Identity = 102/385 (26.49%), Postives = 171/385 (44.42%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. TAIR 10
Match: AT1G65090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1234 Blast hits to 904 proteins in 178 species: Archae - 0; Bacteria - 58; Metazoa - 431; Fungi - 95; Plants - 83; Viruses - 38; Other Eukaryotes - 529 (source: NCBI BLink). ) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-15 Identity = 105/429 (24.48%), Postives = 184/429 (42.89%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. TAIR 10
Match: AT5G36100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65090.3); Has 57 Blast hits to 49 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 3.4e-15 Identity = 95/383 (24.80%), Postives = 159/383 (41.51%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. TAIR 10
Match: AT1G65090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits to 1033 proteins in 192 species: Archae - 0; Bacteria - 61; Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42; Other Eukaryotes - 598 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 2.6e-10 Identity = 60/205 (29.27%), Postives = 99/205 (48.29%), Query Frame = 0
BLAST of CaUC01G009400.1 vs. TAIR 10
Match: AT5G36100.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-07 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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