CaUC01G000920.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTGCAACAAACCCTTGTTGCCACTTTCTCTCCTTTCGCCCTGCTCCTCCCAATTCTAGGTTTTCGATTAGGGTTCATTTGAAGCCTCTCCTCCCTCGTTTTCCTCTCAATTCAAGCATCCATTGCGTCAGCACTCTCTCCCGACGCCGCCGAAATGTAAGCTCTCTCTCTTTATATATATATATATATATCCACAAGAGAAACGGGCATTTTTGGTTTCTGTTATGTTGAGAAATGATGAATTCTGAAAAGGGGTTTTCGATTTTTCACTGGCTGTAGTGTAAAGTTTGTATTATGTGTTGCTTCGGATAAGAAATGATGTATGAATATTGGGTGTCTTTTAAATTTTCTTTATTTTGAAGCTTTTTCTGAACTTCTCTGTTATATGAATTCAAGTGGAAGTTCAATTCGATTCTGATTCTTTGCCATTGAACTGTAACTTTAAATGGATTTCTGAGATGAAATTGGTTTTCATAGAATGCTCACTGGAGGGTTATGCCTTCTTCTCTGCTGAATTGTTTTTGTTTTGAAGAAATGGGAGATTCTGTGCTTTCGACGCGAAGAGTCCTCATCGGAAAATTTTGAGTCCAAGTCTGTAGAAGATAAATTGGCAGAAGACCTGGTGCCAACCCCTGAAATCAATCAACCGAGTGACCCGAGAAAAGAATGGGCTTCTAGTTTATACAAGGTAAATTTATGTTTGCAGCATTTGAATGACTTTATATAATCTTCAATTTTAAAGGAAAGCTATTATTACCCTCTCCTAAACGATAGCTCTGTATACATGTATACTGTTTAGATAAATCCCTGAACGAAATATATGTGTTAATGTATGTATGAACGAAGTAGGCCTTAGGGAATGTAAAACTTGATGAAAGAAAGTCTAACGAGCTAAATAAGACTAGAGTGGCACCCAAATTAGTAAACTAGGGATCAAGTGTACTTATTCTAATTAAGGTCGCCAATATATACTTAACTGCTTTACTCTGTTCAGGAACATCTGATGATATATATGAAATATGTAACTACTTCAGCTTTTCATATGGTTGATCAAACTTACAGTAAGCGGTAATCATCAGCACAGTTGACTAAATAACATGTCTGAGAAAACAGGTTAATGTGTGTGTCGGATATGGCTCCTTTGAGTTTTTTTCCCATCCTCTATTTTAGTTTGTCAACATTTGTTCATTCCAAATTTTCTAGTAGTTAAATGAAGATATTCAATTTTACTATGCATCATGTTCAAAGGCAGCAACTTGTCTATTTTGTTGTCTACAGTGCAGTGTTAAAGTAGGTTATCTTGGTGTGGGAGTTGGAGGTTTGCTTGAACAATTGTCTCACAGATGTGACAACTCCACTTGATTAGCATTTTGTAGATTTACTTGATTAGCATTTTGTAGATTTCTTACTTATATTTTATATTACCCTTGGTTGGAGGATTCCCAGCTCCCTTCATCTCGTTAACTGAGGTTGGAGTGGTTCTTCTTCTTAGTTGTTATTGTTGTTGTGAAAGACCAATCCTGCTGTTTTACTCATCCTTAAAATTAGTAAGAGTGAAAAGTTTCTGATTGACTGCTCGCCCATGGTGTCCTCGTTGGGAGTTATTCACTTTATACTGTACTAAATCCTTGTTGTGCCTCGTTTAATATATATATTTTTATCTATTTAATTAGTGACTCTCACCATGTGATCAGGAAACTTACTGCCTAATTCATTTTTATTTTGTTTGCCTCAGGCCGTTGAATCAATATTTGTTACAAAGCCTTGGGTGGTTCCATGGACAGCAAAAACCATTGTTCAGGTGGATGCCTAGTTTTCTGCCTTTTTTCTCTTTTTCCTGTTTTGTTCATCTTGTATAATCTAGATAAGCAGCTGAAAATTTCGCCAATAATATACATTAATGTGGCTGTAATTGCTATATCATGATACATTTTAGGTATTGTCATGGAACATCAAGATTGTGTTCATATTATATCAAGTATACTTGTTGCCAAAGTGAGCCCCTTAGAAAGTTGATATAGATTAGCAAGTCATGTGAAATTAAGAAAACGAAATGAATTAAACAAGTTGAATTTTCTGGTGATATAGGTTATGCTTCTCTGGGTTGCTTCATTTTGGGTTATAGGGTCATGGATAATTCCAATAATAGCCCATACAGCAGGATACAGAAAGGAATTCATGACGCACAGAGGGCAAGCCTTGTACAGCCTTCTTACGGATGTGGCCGAAGGGCTTACCGGGATGGCTATTCTGCATCGCTGCCTCTCAAGATTCCATCCCCTTCCACCCGGCTGGTTTAAATTCAGCTTTGAGGGGAAATGGCAATTTGATGTTGGTTTAGGCTGCCTTATGTTTCCACTTGTAAACCGTCTTTCACAGGTGAATCTAAACTTGTTGCCCATTCTTCCCTCAACTCCAATTACTGTCTCAAGTGTCGAACAATCAATCGTTGCTAGGGACCCAGTGGCAATGGCACTCTATGCAGTGGTCGTGTCCGTCTGTGCCCCCATTTGGGAGGAGATTGTGTTCCGAGGGTTCCTTCTACCGTCGTTGACGAAATATATGCCGGTATGGTGCTCTATTTTGGTGAGTTCAATAGCTTTTGCTTTGGCACATTTCAATATGCAGAGGATGTTACCTCTGATACTGCTTGGGGTGGTGATGGGTACTGTGTATGCAAGGACTAGGAACCTTCTACCATCGATGTTGTTGCATAGCCTTTGGAATGCCTTTGTATTTTTAGATCTCATGAAATAA ATGTCCACTGCAACAAACCCTTGTTGCCACTTTCTCTCCTTTCGCCCTGCTCCTCCCAATTCTAGGTTTTCGATTAGGGTTCATTTGAAGCCTCTCCTCCCTCGTTTTCCTCTCAATTCAAGCATCCATTGCGTCAGCACTCTCTCCCGACGCCGCCGAAATAAATGGGAGATTCTGTGCTTTCGACGCGAAGAGTCCTCATCGGAAAATTTTGAGTCCAAGTCTGTAGAAGATAAATTGGCAGAAGACCTGGTGCCAACCCCTGAAATCAATCAACCGAGTGACCCGAGAAAAGAATGGGCTTCTAGTTTATACAAGGCCGTTGAATCAATATTTGTTACAAAGCCTTGGGTGGTTCCATGGACAGCAAAAACCATTGTTCAGGTTATGCTTCTCTGGGTTGCTTCATTTTGGGTTATAGGGTCATGGATAATTCCAATAATAGCCCATACAGCAGGATACAGAAAGGAATTCATGACGCACAGAGGGCAAGCCTTGTACAGCCTTCTTACGGATGTGGCCGAAGGGCTTACCGGGATGGCTATTCTGCATCGCTGCCTCTCAAGATTCCATCCCCTTCCACCCGGCTGGTTTAAATTCAGCTTTGAGGGGAAATGGCAATTTGATGTTGGTTTAGGCTGCCTTATGTTTCCACTTGTAAACCGTCTTTCACAGGTGAATCTAAACTTGTTGCCCATTCTTCCCTCAACTCCAATTACTGTCTCAAGTGTCGAACAATCAATCGTTGCTAGGGACCCAGTGGCAATGGCACTCTATGCAGTGGTCGTGTCCGTCTGTGCCCCCATTTGGGAGGAGATTGTGTTCCGAGGGTTCCTTCTACCGTCGTTGACGAAATATATGCCGGTATGGTGCTCTATTTTGGTGAGTTCAATAGCTTTTGCTTTGGCACATTTCAATATGCAGAGGATGTTACCTCTGATACTGCTTGGGGTGGTGATGGGTACTGTGTATGCAAGGACTAGGAACCTTCTACCATCGATGTTGTTGCATAGCCTTTGGAATGCCTTTGTATTTTTAGATCTCATGAAATAA ATGTCCACTGCAACAAACCCTTGTTGCCACTTTCTCTCCTTTCGCCCTGCTCCTCCCAATTCTAGGTTTTCGATTAGGGTTCATTTGAAGCCTCTCCTCCCTCGTTTTCCTCTCAATTCAAGCATCCATTGCGTCAGCACTCTCTCCCGACGCCGCCGAAATAAATGGGAGATTCTGTGCTTTCGACGCGAAGAGTCCTCATCGGAAAATTTTGAGTCCAAGTCTGTAGAAGATAAATTGGCAGAAGACCTGGTGCCAACCCCTGAAATCAATCAACCGAGTGACCCGAGAAAAGAATGGGCTTCTAGTTTATACAAGGCCGTTGAATCAATATTTGTTACAAAGCCTTGGGTGGTTCCATGGACAGCAAAAACCATTGTTCAGGTTATGCTTCTCTGGGTTGCTTCATTTTGGGTTATAGGGTCATGGATAATTCCAATAATAGCCCATACAGCAGGATACAGAAAGGAATTCATGACGCACAGAGGGCAAGCCTTGTACAGCCTTCTTACGGATGTGGCCGAAGGGCTTACCGGGATGGCTATTCTGCATCGCTGCCTCTCAAGATTCCATCCCCTTCCACCCGGCTGGTTTAAATTCAGCTTTGAGGGGAAATGGCAATTTGATGTTGGTTTAGGCTGCCTTATGTTTCCACTTGTAAACCGTCTTTCACAGGTGAATCTAAACTTGTTGCCCATTCTTCCCTCAACTCCAATTACTGTCTCAAGTGTCGAACAATCAATCGTTGCTAGGGACCCAGTGGCAATGGCACTCTATGCAGTGGTCGTGTCCGTCTGTGCCCCCATTTGGGAGGAGATTGTGTTCCGAGGGTTCCTTCTACCGTCGTTGACGAAATATATGCCGGTATGGTGCTCTATTTTGGTGAGTTCAATAGCTTTTGCTTTGGCACATTTCAATATGCAGAGGATGTTACCTCTGATACTGCTTGGGGTGGTGATGGGTACTGTGTATGCAAGGACTAGGAACCTTCTACCATCGATGTTGTTGCATAGCCTTTGGAATGCCTTTGTATTTTTAGATCTCATGAAATAA MSTATNPCCHFLSFRPAPPNSRFSIRVHLKPLLPRFPLNSSIHCVSTLSRRRRNKWEILCFRREESSSENFESKSVEDKLAEDLVPTPEINQPSDPRKEWASSLYKAVESIFVTKPWVVPWTAKTIVQVMLLWVASFWVIGSWIIPIIAHTAGYRKEFMTHRGQALYSLLTDVAEGLTGMAILHRCLSRFHPLPPGWFKFSFEGKWQFDVGLGCLMFPLVNRLSQVNLNLLPILPSTPITVSSVEQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPVWCSILVSSIAFALAHFNMQRMLPLILLGVVMGTVYARTRNLLPSMLLHSLWNAFVFLDLMK Homology
BLAST of CaUC01G000920.1 vs. NCBI nr
Match: XP_038875592.1 (uncharacterized protein LOC120068004 [Benincasa hispida]) HSP 1 Score: 687.6 bits (1773), Expect = 5.7e-194 Identity = 341/350 (97.43%), Postives = 345/350 (98.57%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. NCBI nr
Match: XP_008437553.1 (PREDICTED: uncharacterized protein LOC103482932 [Cucumis melo] >KAA0042581.1 CAAX amino terminal protease family [Cucumis melo var. makuwa] >TYK05985.1 CAAX amino terminal protease family [Cucumis melo var. makuwa]) HSP 1 Score: 676.0 bits (1743), Expect = 1.7e-190 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. NCBI nr
Match: XP_011654637.1 (uncharacterized protein LOC101217840 [Cucumis sativus] >KGN49906.1 hypothetical protein Csa_000304 [Cucumis sativus]) HSP 1 Score: 675.6 bits (1742), Expect = 2.2e-190 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. NCBI nr
Match: XP_022973047.1 (uncharacterized protein LOC111471552 [Cucurbita maxima]) HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187 Identity = 330/350 (94.29%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. NCBI nr
Match: XP_023551267.1 (uncharacterized protein LOC111809137 [Cucurbita pepo subsp. pepo] >KAG7016841.1 ydiL [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187 Identity = 328/350 (93.71%), Postives = 337/350 (96.29%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. ExPASy TrEMBL
Match: A0A5A7TLX7 (CAAX amino terminal protease family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00810 PE=4 SV=1) HSP 1 Score: 676.0 bits (1743), Expect = 8.3e-191 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. ExPASy TrEMBL
Match: A0A1S3AUB1 (uncharacterized protein LOC103482932 OS=Cucumis melo OX=3656 GN=LOC103482932 PE=4 SV=1) HSP 1 Score: 676.0 bits (1743), Expect = 8.3e-191 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. ExPASy TrEMBL
Match: A0A0A0KQB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139840 PE=4 SV=1) HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190 Identity = 336/350 (96.00%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. ExPASy TrEMBL
Match: A0A6J1I6G6 (uncharacterized protein LOC111471552 OS=Cucurbita maxima OX=3661 GN=LOC111471552 PE=4 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 6.6e-188 Identity = 330/350 (94.29%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. ExPASy TrEMBL
Match: A0A6J1E6F2 (uncharacterized protein LOC111430389 OS=Cucurbita moschata OX=3662 GN=LOC111430389 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.3e-187 Identity = 327/350 (93.43%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. TAIR 10
Match: AT5G60750.1 (CAAX amino terminal protease family protein ) HSP 1 Score: 406.0 bits (1042), Expect = 3.1e-113 Identity = 208/353 (58.92%), Postives = 266/353 (75.35%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. TAIR 10
Match: AT1G14270.1 (CAAX amino terminal protease family protein ) HSP 1 Score: 83.6 bits (205), Expect = 3.5e-16 Identity = 67/241 (27.80%), Postives = 109/241 (45.23%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. TAIR 10
Match: AT1G14270.2 (CAAX amino terminal protease family protein ) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. TAIR 10
Match: AT1G14270.3 (CAAX amino terminal protease family protein ) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of CaUC01G000920.1 vs. TAIR 10
Match: AT1G14270.4 (CAAX amino terminal protease family protein ) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|