CaUC01G000800.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G000800.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	UBA domain-containing protein
Location	Ciama_Chr01: 577831 .. 580621 (+)
Sequence length	1262
RNA-Seq Expression	CaUC01G000800.1
Synteny	CaUC01G000800.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAAAAACAAATCTCAAAGAGAAATTTATTGAAAATGAAATCCAAAATTTGAAAACATAAATTGGGAACGAAACATTATAACTTCAACACCTTGATTTGTCAATTGTCCACCGTCTGTCCCAGAGCTTTTTCCTCTGTTCTCCAATGGCGTACGATTACAGAAACAAGTCCGGCCACTACGATGCTCATCCGCCGATGTACGGCCCAACCGCTTCTTCTTCCCCATCTCCCTCTCCCCATCCCATGTATACACAGTCAATGTACCCCAGGATCGGTCAACAAGCTCCTTCACCGACCCTTCCGGTGGCCCGTCTCTCTTCCCACCATCATTCTTCTTCTCAATCTCCATCACCTACTTCCTCTTGTAAATTCATCGCCTTCCATCTTACGTTATGATGGGTTTTTGACGAATCACTTAGTTTTGTAGTTTATGTGAATTTCAGAAATGGTTTTAGGGTTTTCTTGAATTGTTTGATTTTCCCATGAAATTGATGGGATTTTGTGGTTTTCGTATTGACTTTGATTGGTTGATTTGGTTGTACAGCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCGAATTACTCCTCCGGTGAGTTTTGATTTTGTTGCTCCAGATTGTGAATTCTGTTATGAATGTGAATTGGATCTTGATATCGGTGACTTTCTGGTTCTTTTGTTTTGTAATGAAAATGATTGCTTTGGGTTTTAATGTCTTGACGTTTTCTTACAGCCTCAATTATCTCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAACTCCGAATTGGAATCGGTTTGGGCTGGAACATCTTCCTTCTAAGCCAGTGGAATCCACATCCTCAATGGTAACTTTTTCTTTTTCTCTTAATTTATATGCTCTTTTTTTTTTCTTCATCAGTGAGCTTCTTAACTAGGATTTTATCTACAAAGTTTTCTTTCTCTCGAAACATATCTGTGACTTTTAATCTCTAGTAGGTTAATTCCTTATCCTTGACATCATTAGTCACATATATATTACCTTAGAAATTCTATTGTTTATGATTTGCAAACTAAACTAAACTCTTTGATTGTCTCTTGAAAAAGAACGGAAAACTACTTGATTCTATTTGATTGCCTTTTTTTCTCAAAATGGTATTATATGGTATGTCTCACGGTTTAGATTCCACAATCTACATATCTTCTTATGAGTATACATGTCTCCTTGTAGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGCGACAATCCTACCAAGGTAATTATGAACGATTGGTGTAGTGACATCCTACGAATATGGGATCTGATCTGATCTTATTGTAATGTATTGTATTTAAGGCATTTGATATGTTCTTGATAAATCACCATGATTGGCCCCTGGTCAATAAGGGCCCATGTAAATTACATAGTGCTTAAAGGAGGGATTGGGTTTAACCATGGTGGCCACTTACCTAGGATCCAATATCTTATATCTTATATTTTATGAGTTTTCTTGGCATCTAAGTATAAAGTTACGTAATTTGTTCCACGAGAATAATTGAGGTACATCTGACCTTAACACATATATATAGTCTATTTATACAAAATGGTGAAGTGGTCCTCTTGAAAGAGAGGGTGCCTTTCGGAATGCAGACACAGTGGTGCATGGTTGGGTTGTTGTCGGCTACTGGCTCAGCGATAAGTTAGAGGAAGGTCAAGTATTATTAGTGGTAGGTTGGAGGAAGGTCAGGTATTATCTTTGATAAGTCGGAGGAAGGCCAGGACGATGATAAGTTATCATTGTTATAAAGATGTTAACTTTTCGTGCCCTTTAGCGCTGGAGACAAGTGCTATAATGGCTAGAACGGAGATATGTATACTTGATATGATTTATCACATATTAGATAACTTGTGTAAAAAACTTGCAGGATTATCTCTACTTCTCAAATCTGACTCTACTATAATTAAGTTGCTTGCTTGCGATGCACAGATGGGGGATCTATTCACAGCTCTTTGATTTATCTTATCATTTACTCTATTTGATACAATTCTACTTCACCTATTAAGAGGTTAAAACATAGTTTCGTTCTCTGAAGTCTATTTTTGTTTCTTAATCTGGTCTGTAAAGTTCAGAGTTAGTCCCAAGTTTTAGCAAGTAATAACTTCCAGATTTAGTTCCTCTAATTCCATCTTGTTAAAGTACTTCATTCTATGATGTCTTTCATGACTATTGTGAGTTTTTTGTCTGGCTTTGCTGACAGTCTGAGTAATTTTGTAGGTTCAAGAATTTGTAAAAGGCTACACACTTCTACGAGAAATGGGATTTTCTTCCATCAAGGTGGTCGAGGCATTGCTCATGTATGACAATGACACTGATAAGGCTGTAGCTCACTTTCTTGGTGGTACGTCTTAATTAAGAATTATGGAAATGGTTGTGTCAAGAATTCTGTTGTACTTCAACTATGACATCTTTGTATATGTAATATGACAATAGAGGCCTCGTGGGATTGTAAATGTGATAAATATAGGCATTTATAGTGTATTGTATTCATTTACCTGATGGTGTTTCACCAATGCTTGCAGACTCTCTCAATGGCAGGTAATGATTATTACGTCTTATATTTTTCATGTCTTTGGATTGAATACTGTTGCAGAATTAACTGATAGGTTGATTGCAAAGTTCAATGCTTGATAACTATTT

mRNA sequence

CTTGAAAAACAAATCTCAAAGAGAAATTTATTGAAAATGAAATCCAAAATTTGAAAACATAAATTGGGAACGAAACATTATAACTTCAACACCTTGATTTGTCAATTGTCCACCGTCTGTCCCAGAGCTTTTTCCTCTGTTCTCCAATGGCGTACGATTACAGAAACAAGTCCGGCCACTACGATGCTCATCCGCCGATGTACGGCCCAACCGCTTCTTCTTCCCCATCTCCCTCTCCCCATCCCATGTATACACAGTCAATGTACCCCAGGATCGGTCAACAAGCTCCTTCACCGACCCTTCCGGTGGCCCGTCTCTCTTCCCACCATCATTCTTCTTCTCAATCTCCATCACCTACTTCCTCTTCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAACTCCGAATTGGAATCGGTTTGGGCTGGAACATCTTCCTTCTAAGCCAGTGGAATCCACATCCTCAATGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGCGACAATCCTACCAAGGTAATTATGAACGATTGGTACACAGTGGTGCATGGTTGGGTTGTTGTCGGCTACTGGCTCAGCGATAAGTTAGAGGAAGCGCTGGAGACAAGTGCTATAATGGCTAGAACGGAGATATGTATACTTGATATGATTTATCACATATTAGATAACGTTCAAGAATTTGTAAAAGGCTACACACTTCTACGAGAAATGGGATTTTCTTCCATCAAGGTGGTCGAGGCATTGCTCATGTATGACAATGACACTGATAAGGCTGTAGCTCACTTTCTTGGTGGTACGTCTTAATTAAGAATTATGGAAATGGTTGTGTCAAGAATTCTGTTGTACTTCAACTATGACATCTTTGTATATGTAATATGACAATAGAGGCCTCGTGGGATTGTAAATGTGATAAATATAGGCATTTATAGTGTATTGTATTCATTTACCTGATGGTGTTTCACCAATGCTTGCAGACTCTCTCAATGGCAGGTAATGATTATTACGTCTTATATTTTTCATGTCTTTGGATTGAATACTGTTGCAGAATTAACTGATAGGTTGATTGCAAAGTTCAATGCTTGATAACTATTT

Coding sequence (CDS)

ATGGCGTACGATTACAGAAACAAGTCCGGCCACTACGATGCTCATCCGCCGATGTACGGCCCAACCGCTTCTTCTTCCCCATCTCCCTCTCCCCATCCCATGTATACACAGTCAATGTACCCCAGGATCGGTCAACAAGCTCCTTCACCGACCCTTCCGGTGGCCCGTCTCTCTTCCCACCATCATTCTTCTTCTCAATCTCCATCACCTACTTCCTCTTCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAACTCCGAATTGGAATCGGTTTGGGCTGGAACATCTTCCTTCTAAGCCAGTGGAATCCACATCCTCAATGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGCGACAATCCTACCAAGGTAATTATGAACGATTGGTACACAGTGGTGCATGGTTGGGTTGTTGTCGGCTACTGGCTCAGCGATAAGTTAGAGGAAGCGCTGGAGACAAGTGCTATAATGGCTAGAACGGAGATATGTATACTTGATATGATTTATCACATATTAGATAACGTTCAAGAATTTGTAAAAGGCTACACACTTCTACGAGAAATGGGATTTTCTTCCATCAAGGTGGTCGAGGCATTGCTCATGTATGACAATGACACTGATAAGGCTGTAGCTCACTTTCTTGGTGGTACGTCTTAA

Protein sequence

MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSHHHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS

Homology

[Close]

BLAST of CaUC01G000800.1 vs. NCBI nr
Match: XP_038874870.1 (uncharacterized protein LOC120067367 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 6.4e-108
Identity = 216/278 (77.70%), Postives = 219/278 (78.78%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYDYRNK GHYDAHPPMYGPTASSSPSPSPHPMY+QSMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDYRNKPGHYDAHPPMYGPTASSSPSPSPHPMYSQSMYPRIGQQAPSTTTPVARLSSH 60

Query: 61  HHSS--SQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSS  S SPSP+SSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSPSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKETPNWNRFGLEHLPSKPVES-TSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDN 180
           EAEKETPNWNRFGLEHLPSKPVES TSSM SIGDPVVSKYVASGLSREAVSFAVANYGDN
Sbjct: 121 EAEKETPNWNRFGLEHLPSKPVESTTSSMASIGDPVVSKYVASGLSREAVSFAVANYGDN 180

Query: 181 PTKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVK 240
           PTK                                                   VQEFVK
Sbjct: 181 PTK---------------------------------------------------VQEFVK 227

Query: 241 GYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           GYTLLREMGFSS+KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 GYTLLREMGFSSVKVVEALLMYDNDTDKAVAHFLGGTS 227

[Close]

BLAST of CaUC01G000800.1 vs. NCBI nr
Match: XP_004145917.1 (uncharacterized protein LOC101219735 [Cucumis sativus] >KGN49892.1 hypothetical protein Csa_000135 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 4.3e-104
Identity = 206/275 (74.91%), Postives = 213/275 (77.45%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYD+RN SGHYD+H PMY  TASSSPSPSPHPMY+ SMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSS SPSP+SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLEH P KPVESTSSMGSIGDPVVSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYT 240
                                                              VQEFVKGYT
Sbjct: 181 ---------------------------------------------------VQEFVKGYT 224

Query: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224

[Close]

BLAST of CaUC01G000800.1 vs. NCBI nr
Match: XP_008437562.1 (PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 4.0e-102
Identity = 204/275 (74.18%), Postives = 211/275 (76.73%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYD+RN SGHYD+H PMY  TASS+PSPSPHPMY+QSMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           HHSSS S SP+SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLE LP KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYT 240
                                                              VQEFVKGYT
Sbjct: 181 ---------------------------------------------------VQEFVKGYT 223

Query: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 223

[Close]

BLAST of CaUC01G000800.1 vs. NCBI nr
Match: XP_022958203.1 (uncharacterized protein LOC111459499 [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 7.6e-101
Identity = 203/277 (73.29%), Postives = 211/277 (76.17%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYDYRNK G+Y+AHPPMYGP ASSSPSPS HPMYTQSMYPRIGQQ  SP  PVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HHSSSQSPSPT--SSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS +PSP+  SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKG 240
           TK                                                   VQEFVKG
Sbjct: 181 TK---------------------------------------------------VQEFVKG 226

Query: 241 YTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           YTLLREMGF S KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 YTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of CaUC01G000800.1 vs. NCBI nr
Match: KAG7035731.1 (hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.9 bits (969), Expect = 7.6e-101
Identity = 203/277 (73.29%), Postives = 211/277 (76.17%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYDYRNK G+Y+AHPPMYGP ASSSPSPS HPMYTQSMYPRIGQQ  SP  PVAR+SSH
Sbjct: 44  MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 103

Query: 61  HHSSSQSPSPT--SSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS +PSP+  SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 104 HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 163

Query: 121 EAEKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 164 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 223

Query: 181 TKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKG 240
           TK                                                   VQEFVKG
Sbjct: 224 TK---------------------------------------------------VQEFVKG 269

Query: 241 YTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           YTLLREMGF S KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 284 YTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 269

[Close]

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL
Match: A0A0A0KNB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.1e-104
Identity = 206/275 (74.91%), Postives = 213/275 (77.45%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYD+RN SGHYD+H PMY  TASSSPSPSPHPMY+ SMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSS SPSP+SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLEH P KPVESTSSMGSIGDPVVSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYT 240
                                                              VQEFVKGYT
Sbjct: 181 ---------------------------------------------------VQEFVKGYT 224

Query: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224

[Close]

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL
Match: A0A1S3AUG0 (uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.0e-102
Identity = 204/275 (74.18%), Postives = 211/275 (76.73%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYD+RN SGHYD+H PMY  TASS+PSPSPHPMY+QSMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           HHSSS S SP+SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLE LP KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYT 240
                                                              VQEFVKGYT
Sbjct: 181 ---------------------------------------------------VQEFVKGYT 223

Query: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 223

[Close]

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL
Match: A0A6J1H2H7 (uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC111459499 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.7e-101
Identity = 203/277 (73.29%), Postives = 211/277 (76.17%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYDYRNK G+Y+AHPPMYGP ASSSPSPS HPMYTQSMYPRIGQQ  SP  PVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HHSSSQSPSPT--SSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS +PSP+  SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKG 240
           TK                                                   VQEFVKG
Sbjct: 181 TK---------------------------------------------------VQEFVKG 226

Query: 241 YTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           YTLLREMGF S KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 YTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL
Match: A0A1S3AUC1 (uncharacterized protein LOC103482940 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.4e-100
Identity = 201/272 (73.90%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYD+RN SGHYD+H PMY  TASS+PSPSPHPMY+QSMYPRIGQQAPS T PVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           HHSSS S SP+SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLE LP KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKGYT 240
                                                              VQEFVKGYT
Sbjct: 181 ---------------------------------------------------VQEFVKGYT 220

Query: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 273
           LLREMGFSSIKVVEALLMYDNDTDKAVAHFLG
Sbjct: 241 LLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 220

[Close]

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL
Match: A0A6J1K3U0 (velvet complex subunit B OS=Cucurbita maxima OX=3661 GN=LOC111490923 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100
Identity = 201/277 (72.56%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSPHPMYTQSMYPRIGQQAPSPTLPVARLSSH 60
           MAYDYRNK G+Y+AHPPMYGP ASSSPSPS HPMYTQSMYPRIGQQ  SP  PV R+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVPRVSSH 60

Query: 61  HHSSSQSPSPT--SSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS +PSP+  SSSGLGIRVTIKPEYRITPPPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKETPNWNRFGLEHLPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVNKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQEFVKG 240
           TK                                                   VQEFVKG
Sbjct: 181 TK---------------------------------------------------VQEFVKG 226

Query: 241 YTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           YTLLREMGF S KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 241 YTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of CaUC01G000800.1 vs. TAIR 10
Match: AT5G53330.1 (Ubiquitin-associated/translation elongation factor EF1B protein )

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-56
Identity = 139/282 (49.29%), Postives = 167/282 (59.22%), Query Frame = 0


Query: 1   MAYDYRNKSGHYDAHPPMYGPTASSSPSPSP-HPMYTQSMYPRIGQQ-APSPTL--PVAR 60
           M YDYRNKSG      PMYGP  S+SPSPS  HPMY    YP+IGQQ  P P    P  R
Sbjct: 1   MDYDYRNKSGGPSYPRPMYGP-PSTSPSPSSNHPMYG---YPKIGQQTGPGPQFFSPPER 60

Query: 61  LSSHHHSSSQSPSPTSSSGLGIRVTIKPEYRITPPPQLSPQIGDIPRSNFQFDFEFEKKV 120
            SS  H++S       SSG+GIRV +KPEYRITPPPQL P++GDI RS+FQFDF  E+KV
Sbjct: 61  NSSFQHNTS------PSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKV 120

Query: 121 LAEAEKETPNWNRFGLEHLPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVAN 180
           LAEAEK+ P+W++FG E+ P+K  E S SS+G +   D VV KY ASGL+REAV+ AVAN
Sbjct: 121 LAEAEKDNPDWSKFGSENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVAN 180

Query: 181 YGDNPTKVIMNDWYTVVHGWVVVGYWLSDKLEEALETSAIMARTEICILDMIYHILDNVQ 240
           YGDNPTK                                                   VQ
Sbjct: 181 YGDNPTK---------------------------------------------------VQ 221

Query: 241 EFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 276
           EF  G+T +REMGF +  V +AL M++NDTDKA+AH L G+S
Sbjct: 241 EFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221

The following BLAST results are available for this feature:

BLAST of CaUC01G000800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874870.1	6.4e-108	77.70	uncharacterized protein LOC120067367 [Benincasa hispida]	[more]
XP_004145917.1	4.3e-104	74.91	uncharacterized protein LOC101219735 [Cucumis sativus] >KGN49892.1 hypothetical ...	[more]
XP_008437562.1	4.0e-102	74.18	PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo]	[more]
XP_022958203.1	7.6e-101	73.29	uncharacterized protein LOC111459499 [Cucurbita moschata]	[more]
KAG7035731.1	7.6e-101	73.29	hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC01G000800.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC01G000800.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNB8	2.1e-104	74.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1	[more]
A0A1S3AUG0	2.0e-102	74.18	uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1H2H7	3.7e-101	73.29	uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A1S3AUC1	1.4e-100	73.90	uncharacterized protein LOC103482940 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1K3U0	3.1e-100	72.56	velvet complex subunit B OS=Cucurbita maxima OX=3661 GN=LOC111490923 PE=4 SV=1	[more]

BLAST of CaUC01G000800.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53330.1	6.1e-56	49.29	Ubiquitin-associated/translation elongation factor EF1B protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042575	Ubiquitin-associated protein 1, C-terminal	GENE3D	1.20.120.1920	UBAP1 SOUBA domain	coord: 146..273 e-value: 3.0E-5 score: 26.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..77
None	No IPR available	PANTHER	PTHR15960:SF7	SUBFAMILY NOT NAMED	coord: 231..273
None	No IPR available	PANTHER	PTHR15960:SF7	SUBFAMILY NOT NAMED	coord: 1..190
IPR038870	Ubiquitin-associated protein 1	PANTHER	PTHR15960	LD44032P	coord: 1..190
IPR038870	Ubiquitin-associated protein 1	PANTHER	PTHR15960	LD44032P	coord: 231..273
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 240..273

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC01G000800	CaUC01G000800	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:577831..578196	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:578377..578429	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:578571..578735	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:579098..579218	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:579574..579633	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:579756..579829	exon
CaUC01G000800.1-exon	CaUC01G000800.1-exon-Ciama_Chr01:580199..580621	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G000800.1-five_prime_utr	CaUC01G000800.1-five_prime_utr-Ciama_Chr01:577831..577976	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:577977..578196	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:578377..578429	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:578571..578735	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:579098..579218	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:579574..579633	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:579756..579829	CDS
CaUC01G000800.1-cds	CaUC01G000800.1-cds-Ciama_Chr01:580199..580333	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G000800.1-three_prime_utr	CaUC01G000800.1-three_prime_utr-Ciama_Chr01:580334..580621	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC01G000800.1	CaUC01G000800.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component	GO:0000813	ESCRT I complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043130	ubiquitin binding